BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1606_E02_I04ZS5.tfa
         (395 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.2253                                                       38  0.047
Contig1.1020                                                       36  0.18
Contig1.281                                                        36  0.18
Contig1.131                                                        34  0.73
Contig1.2315                                                       32  2.9
Contig1.1936                                                       32  2.9
Contig1.838                                                        32  2.9
Contig1.751                                                        32  2.9
Contig1.348                                                        32  2.9

>Contig1.2253 
          Length = 6803

 Score = 38.2 bits (19), Expect = 0.047
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 136  gttcaagaagaagtcaaag 154
            |||||||||||||||||||
Sbjct: 1164 gttcaagaagaagtcaaag 1146


>Contig1.1020 
          Length = 32521

 Score = 36.2 bits (18), Expect = 0.18
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 114   gcatatgcaaatgcaagg 131
             ||||||||||||||||||
Sbjct: 14974 gcatatgcaaatgcaagg 14957


>Contig1.281 
          Length = 47277

 Score = 36.2 bits (18), Expect = 0.18
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 142   gaagaagtcaaaggatga 159
             ||||||||||||||||||
Sbjct: 26222 gaagaagtcaaaggatga 26239


>Contig1.131 
          Length = 15920

 Score = 34.2 bits (17), Expect = 0.73
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 47   ctcaaggacaacctcaa 63
            |||||||||||||||||
Sbjct: 5134 ctcaaggacaacctcaa 5150


>Contig1.2315 
          Length = 44580

 Score = 32.2 bits (16), Expect = 2.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 139   caagaagaagtcaaag 154
             ||||||||||||||||
Sbjct: 17866 caagaagaagtcaaag 17881


>Contig1.1936 
          Length = 32328

 Score = 32.2 bits (16), Expect = 2.9
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 53   gacaacctcaaggacg 68
            ||||||||||||||||
Sbjct: 4181 gacaacctcaaggacg 4166


>Contig1.838 
          Length = 41800

 Score = 32.2 bits (16), Expect = 2.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 238   tgggcgactaccaatg 253
             ||||||||||||||||
Sbjct: 38942 tgggcgactaccaatg 38957


>Contig1.751 
          Length = 24045

 Score = 32.2 bits (16), Expect = 2.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 152   aaggatgagtccaagg 167
             ||||||||||||||||
Sbjct: 15130 aaggatgagtccaagg 15145


>Contig1.348 
          Length = 41634

 Score = 32.2 bits (16), Expect = 2.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 197   gcggttcatctcaaac 212
             ||||||||||||||||
Sbjct: 22513 gcggttcatctcaaac 22528


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7052
Number of Sequences: 3031
Number of extensions: 7052
Number of successful extensions: 49
Number of sequences better than 10.0: 9
length of query: 395
length of database: 37,878,070
effective HSP length: 17
effective length of query: 378
effective length of database: 37,826,543
effective search space: 14298433254
effective search space used: 14298433254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)