BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1606_F11_K22ZS5.tfa
         (457 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.1638                                                       36  0.21
Contig1.2441                                                       34  0.85
Contig1.1752                                                       34  0.85
Contig1.1825                                                       32  3.3
Contig1.1768                                                       32  3.3
Contig1.1712                                                       32  3.3
Contig1.1347                                                       32  3.3
Contig1.922                                                        32  3.3
Contig1.820                                                        32  3.3
Contig1.493                                                        32  3.3

>Contig1.1638 
          Length = 20260

 Score = 36.2 bits (18), Expect = 0.21
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 117   cccatcaaagctcgcatt 134
             ||||||||||||||||||
Sbjct: 16524 cccatcaaagctcgcatt 16507


>Contig1.2441 
          Length = 43596

 Score = 34.2 bits (17), Expect = 0.85
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 173  agtgatgagatatgttg 189
            |||||||||||||||||
Sbjct: 2742 agtgatgagatatgttg 2758


>Contig1.1752 
          Length = 16463

 Score = 34.2 bits (17), Expect = 0.85
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 50   caggccgcaccagggct 66
            |||||||||||||||||
Sbjct: 4650 caggccgcaccagggct 4634


>Contig1.1825 
          Length = 38144

 Score = 32.2 bits (16), Expect = 3.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 209   gtaaatatggttgaag 224
             ||||||||||||||||
Sbjct: 10859 gtaaatatggttgaag 10844


>Contig1.1768 
          Length = 10710

 Score = 32.2 bits (16), Expect = 3.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 161  cttggactgttgagtg 176
            ||||||||||||||||
Sbjct: 7795 cttggactgttgagtg 7780


>Contig1.1712 
          Length = 15596

 Score = 32.2 bits (16), Expect = 3.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 298  gttgccactcaaggaa 313
            ||||||||||||||||
Sbjct: 3757 gttgccactcaaggaa 3772


>Contig1.1347 
          Length = 38157

 Score = 32.2 bits (16), Expect = 3.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 201   tcgagccagtaaatat 216
             ||||||||||||||||
Sbjct: 23807 tcgagccagtaaatat 23792


>Contig1.922 
          Length = 66665

 Score = 32.2 bits (16), Expect = 3.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 435   aaattgattgaccgtg 450
             ||||||||||||||||
Sbjct: 25592 aaattgattgaccgtg 25577


>Contig1.820 
          Length = 22792

 Score = 32.2 bits (16), Expect = 3.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 162  ttggactgttgagtga 177
            ||||||||||||||||
Sbjct: 6957 ttggactgttgagtga 6942


>Contig1.493 
          Length = 11052

 Score = 32.2 bits (16), Expect = 3.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 430  ttggtaaattgattga 445
            ||||||||||||||||
Sbjct: 4993 ttggtaaattgattga 4978


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7152
Number of Sequences: 3031
Number of extensions: 7152
Number of successful extensions: 26
Number of sequences better than 10.0: 10
length of query: 457
length of database: 37,878,070
effective HSP length: 17
effective length of query: 440
effective length of database: 37,826,543
effective search space: 16643678920
effective search space used: 16643678920
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)