BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1608_F08_L16ZS5.tfa
         (260 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.910                                                        36  0.12
Contig1.2408                                                       34  0.47
Contig1.214                                                        34  0.47
Contig1.2817                                                       32  1.9
Contig1.1502                                                       32  1.9
Contig1.1491                                                       32  1.9
Contig1.2472                                                       30  7.3
Contig1.1334                                                       30  7.3
Contig1.1078                                                       30  7.3
Contig1.421                                                        30  7.3
Contig1.112                                                        30  7.3
Contig1.77                                                         30  7.3

>Contig1.910 
          Length = 46831

 Score = 36.2 bits (18), Expect = 0.12
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 167   cggggtacctgcagtgcatgca 188
             |||||||||||||||| |||||
Sbjct: 27442 cggggtacctgcagtggatgca 27421


>Contig1.2408 
          Length = 8351

 Score = 34.2 bits (17), Expect = 0.47
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 33   cgaccatgtaatgggag 49
            |||||||||||||||||
Sbjct: 1011 cgaccatgtaatgggag 1027


>Contig1.214 
          Length = 47157

 Score = 34.2 bits (17), Expect = 0.47
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                  
Query: 220   gaccctagatcagtcaaaatg 240
             ||||||| |||||||||||||
Sbjct: 32049 gaccctaaatcagtcaaaatg 32069


>Contig1.2817 
          Length = 4933

 Score = 32.2 bits (16), Expect = 1.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 86   atcagcacacaactac 101
            ||||||||||||||||
Sbjct: 3447 atcagcacacaactac 3462


>Contig1.1502 
          Length = 8297

 Score = 32.2 bits (16), Expect = 1.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 244  aaagcaaagatactat 259
            ||||||||||||||||
Sbjct: 4513 aaagcaaagatactat 4528


>Contig1.1491 
          Length = 18939

 Score = 32.2 bits (16), Expect = 1.9
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 56   cgggttggggttcggg 71
            ||||||||||||||||
Sbjct: 3382 cgggttggggttcggg 3397


>Contig1.2472 
          Length = 10136

 Score = 30.2 bits (15), Expect = 7.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 81   gtgtcatcagcacac 95
            |||||||||||||||
Sbjct: 7220 gtgtcatcagcacac 7234


>Contig1.1334 
          Length = 22372

 Score = 30.2 bits (15), Expect = 7.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 74    tcggagagtgtcatc 88
             |||||||||||||||
Sbjct: 16715 tcggagagtgtcatc 16729


>Contig1.1078 
          Length = 73673

 Score = 30.2 bits (15), Expect = 7.3
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 3     ctgggcggatcggta 17
             |||||||||||||||
Sbjct: 32922 ctgggcggatcggta 32908


>Contig1.421 
          Length = 51830

 Score = 30.2 bits (15), Expect = 7.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 171   gtacctgcagtgcat 185
             |||||||||||||||
Sbjct: 38742 gtacctgcagtgcat 38756


>Contig1.112 
          Length = 16242

 Score = 30.2 bits (15), Expect = 7.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 57   gggttggggttcggg 71
            |||||||||||||||
Sbjct: 1126 gggttggggttcggg 1140


>Contig1.77 
          Length = 39812

 Score = 30.2 bits (15), Expect = 7.3
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                
Query: 55    ccgggttggggttcgggat 73
             ||||||||||||| |||||
Sbjct: 26029 ccgggttggggtttgggat 26047


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3371
Number of Sequences: 3031
Number of extensions: 3371
Number of successful extensions: 45
Number of sequences better than 10.0: 12
length of query: 260
length of database: 37,878,070
effective HSP length: 16
effective length of query: 244
effective length of database: 37,829,574
effective search space: 9230416056
effective search space used: 9230416056
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)