BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1609_C10_E19ZT.tfa
         (440 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.1446                                                       64  9e-10
Contig1.1611                                                       34  0.81
Contig1.2191                                                       32  3.2
Contig1.2047                                                       32  3.2
Contig1.2013                                                       32  3.2
Contig1.1450                                                       32  3.2
Contig1.482                                                        32  3.2
Contig1.333                                                        32  3.2
Contig1.112                                                        32  3.2

>Contig1.1446 
          Length = 15501

 Score = 63.9 bits (32), Expect = 9e-10
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 166  ttcatgacaggagtttctcttcaatgcaaaatcaagaaccaccatcccgaatggtc 221
            |||||||||| ||| || || ||||||||||||||||| ||||||||||| |||||
Sbjct: 4622 ttcatgacagcagtctcgctccaatgcaaaatcaagaatcaccatcccgagtggtc 4677


 Score = 48.1 bits (24), Expect = 5e-05
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 229  tacaacaccactttcatccgttggacaacgca 260
            |||||||| ||||||||||||||||| |||||
Sbjct: 4742 tacaacacaactttcatccgttggacgacgca 4773


>Contig1.1611 
          Length = 23847

 Score = 34.2 bits (17), Expect = 0.81
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                  
Query: 414   agctgctggagcagcgggaga 434
             ||||| |||||||||||||||
Sbjct: 18904 agctgttggagcagcgggaga 18924


>Contig1.2191 
          Length = 16121

 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 99    attggccaaagacggc 114
             ||||||||||||||||
Sbjct: 10744 attggccaaagacggc 10759


>Contig1.2047 
          Length = 30477

 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 91   cgatggacattggcca 106
            ||||||||||||||||
Sbjct: 9772 cgatggacattggcca 9787


>Contig1.2013 
          Length = 31084

 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 301   gcgcagtgcgacgctc 316
             ||||||||||||||||
Sbjct: 26878 gcgcagtgcgacgctc 26893


>Contig1.1450 
          Length = 50248

 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 103   gccaaagacggcactg 118
             ||||||||||||||||
Sbjct: 27163 gccaaagacggcactg 27178


>Contig1.482 
          Length = 2427

 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 400 ggcttggcggatcaag 415
           ||||||||||||||||
Sbjct: 369 ggcttggcggatcaag 354


>Contig1.333 
          Length = 23486

 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 94    tggacattggccaaag 109
             ||||||||||||||||
Sbjct: 21905 tggacattggccaaag 21920


 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 192  caaaatcaagaaccac 207
            ||||||||||||||||
Sbjct: 4488 caaaatcaagaaccac 4503


>Contig1.112 
          Length = 16242

 Score = 32.2 bits (16), Expect = 3.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                
Query: 289  attgccatggctgcgcagtg 308
            ||||||| ||||||||||||
Sbjct: 3874 attgccacggctgcgcagtg 3855


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8309
Number of Sequences: 3031
Number of extensions: 8309
Number of successful extensions: 52
Number of sequences better than 10.0: 9
length of query: 440
length of database: 37,878,070
effective HSP length: 17
effective length of query: 423
effective length of database: 37,826,543
effective search space: 16000627689
effective search space used: 16000627689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)