BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1609_F09_K17ZT.tfa
         (502 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.103                                                        34  0.93
Contig1.40                                                         34  0.93
Contig1.2323                                                       32  3.7
Contig1.2251                                                       32  3.7
Contig1.1735                                                       32  3.7
Contig1.1679                                                       32  3.7
Contig1.1625                                                       32  3.7
Contig1.1542                                                       32  3.7
Contig1.622                                                        32  3.7
Contig1.113                                                        32  3.7

>Contig1.103 
          Length = 14886

 Score = 34.2 bits (17), Expect = 0.93
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 316  agggcactgttgggcaa 332
            |||||||||||||||||
Sbjct: 2543 agggcactgttgggcaa 2527


>Contig1.40 
          Length = 30906

 Score = 34.2 bits (17), Expect = 0.93
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 103   ttagaatgcgggatggg 119
             |||||||||||||||||
Sbjct: 30395 ttagaatgcgggatggg 30411


>Contig1.2323 
          Length = 37031

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 280  taaggtaggcaggttg 295
            ||||||||||||||||
Sbjct: 8873 taaggtaggcaggttg 8858


>Contig1.2251 
          Length = 3572

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 279 ctaaggtaggcaggtt 294
           ||||||||||||||||
Sbjct: 868 ctaaggtaggcaggtt 883


>Contig1.1735 
          Length = 30895

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 426  gatacctatttctggg 441
            ||||||||||||||||
Sbjct: 7462 gatacctatttctggg 7477


>Contig1.1679 
          Length = 20354

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 78    gggttggtggccaact 93
             ||||||||||||||||
Sbjct: 19882 gggttggtggccaact 19897


>Contig1.1625 
          Length = 29873

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 298   gtgacttgcaaccaga 313
             ||||||||||||||||
Sbjct: 17592 gtgacttgcaaccaga 17607


>Contig1.1542 
          Length = 17938

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 443  gcaacaggtatggatt 458
            ||||||||||||||||
Sbjct: 2435 gcaacaggtatggatt 2420


>Contig1.622 
          Length = 3464

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 280  taaggtaggcaggttg 295
            ||||||||||||||||
Sbjct: 2190 taaggtaggcaggttg 2175


>Contig1.113 
          Length = 8679

 Score = 32.2 bits (16), Expect = 3.7
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                
Query: 453  tggattacagaggcgaccag 472
            |||||||||||||| |||||
Sbjct: 6349 tggattacagaggcaaccag 6368


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8052
Number of Sequences: 3031
Number of extensions: 8052
Number of successful extensions: 43
Number of sequences better than 10.0: 10
length of query: 502
length of database: 37,878,070
effective HSP length: 17
effective length of query: 485
effective length of database: 37,826,543
effective search space: 18345873355
effective search space used: 18345873355
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)