BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1611_A03_B05ZT.tfa
         (371 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.573                                                        38  0.044
Contig1.978                                                        36  0.17
Contig1.2919                                                       32  2.7
Contig1.2581                                                       32  2.7
Contig1.1986                                                       32  2.7
Contig1.1513                                                       32  2.7
Contig1.1206                                                       32  2.7
Contig1.1148                                                       32  2.7
Contig1.1078                                                       32  2.7
Contig1.658                                                        32  2.7
Contig1.576                                                        32  2.7

>Contig1.573 
          Length = 21434

 Score = 38.2 bits (19), Expect = 0.044
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 331   aaggaggcaaagaagacca 349
             |||||||||||||||||||
Sbjct: 17650 aaggaggcaaagaagacca 17668


>Contig1.978 
          Length = 21224

 Score = 36.2 bits (18), Expect = 0.17
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 34    ttccatctcaaccatcat 51
             ||||||||||||||||||
Sbjct: 13513 ttccatctcaaccatcat 13530


>Contig1.2919 
          Length = 8946

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 240  ggcctttgccaaggaa 255
            ||||||||||||||||
Sbjct: 3832 ggcctttgccaaggaa 3817


>Contig1.2581 
          Length = 16545

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 115  ctgccagcatctacca 130
            ||||||||||||||||
Sbjct: 3123 ctgccagcatctacca 3138


>Contig1.1986 
          Length = 24365

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 31    cctttccatctcaacc 46
             ||||||||||||||||
Sbjct: 14105 cctttccatctcaacc 14090


>Contig1.1513 
          Length = 17496

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 16   ttattctcatattgtc 31
            ||||||||||||||||
Sbjct: 4289 ttattctcatattgtc 4274


>Contig1.1206 
          Length = 38051

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 330   gaaggaggcaaagaag 345
             ||||||||||||||||
Sbjct: 33500 gaaggaggcaaagaag 33515


>Contig1.1148 
          Length = 19582

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 103   ttcatcatgcctctgc 118
             ||||||||||||||||
Sbjct: 18569 ttcatcatgcctctgc 18584


>Contig1.1078 
          Length = 73673

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 27  ttgtcctttccatctcaacc 46
           |||||||||||| |||||||
Sbjct: 683 ttgtcctttccaactcaacc 664


>Contig1.658 
          Length = 39384

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 335  aggcaaagaagaccat 350
            ||||||||||||||||
Sbjct: 7945 aggcaaagaagaccat 7930


>Contig1.576 
          Length = 34654

 Score = 32.2 bits (16), Expect = 2.7
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 307   tcagaggcaaatgaga 322
             ||||||||||||||||
Sbjct: 34080 tcagaggcaaatgaga 34065


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5945
Number of Sequences: 3031
Number of extensions: 5945
Number of successful extensions: 26
Number of sequences better than 10.0: 11
length of query: 371
length of database: 37,878,070
effective HSP length: 16
effective length of query: 355
effective length of database: 37,829,574
effective search space: 13429498770
effective search space used: 13429498770
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)