BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1612_B03_D06ZT.tfa
         (577 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.1657                                                       50  2e-05
Contig1.2959                                                       38  0.069
Contig1.1098                                                       38  0.069
Contig1.2585                                                       34  1.1
Contig1.2057                                                       32  4.3
Contig1.1602                                                       32  4.3
Contig1.937                                                        32  4.3
Contig1.841                                                        32  4.3
Contig1.611                                                        32  4.3

>Contig1.1657 
          Length = 5909

 Score = 50.1 bits (25), Expect = 2e-05
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 148  gttatcctccttgaggatacggccgagaacctggcaaatgg 188
            |||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 5271 gttatccttctcgaggatacagccgagaacctagcaaatgg 5311


>Contig1.2959 
          Length = 6087

 Score = 38.2 bits (19), Expect = 0.069
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 357  tcccagtccttgccatgtc 375
            |||||||||||||||||||
Sbjct: 3402 tcccagtccttgccatgtc 3384


>Contig1.1098 
          Length = 22142

 Score = 38.2 bits (19), Expect = 0.069
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 240  tcatcgtcgctgaagtatg 258
            |||||||||||||||||||
Sbjct: 5206 tcatcgtcgctgaagtatg 5188


>Contig1.2585 
          Length = 11839

 Score = 34.2 bits (17), Expect = 1.1
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 91   gaccccaaactcaaagt 107
            |||||||||||||||||
Sbjct: 3267 gaccccaaactcaaagt 3283


>Contig1.2057 
          Length = 53847

 Score = 32.2 bits (16), Expect = 4.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 17    gacaaccaaaagatct 32
             ||||||||||||||||
Sbjct: 17984 gacaaccaaaagatct 17969


>Contig1.1602 
          Length = 54185

 Score = 32.2 bits (16), Expect = 4.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 288  tttcgtattcttgcca 303
            ||||||||||||||||
Sbjct: 2911 tttcgtattcttgcca 2926


>Contig1.937 
          Length = 10292

 Score = 32.2 bits (16), Expect = 4.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 309  agacagcattcattgt 324
            ||||||||||||||||
Sbjct: 4642 agacagcattcattgt 4627


>Contig1.841 
          Length = 19882

 Score = 32.2 bits (16), Expect = 4.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 454  tatgcagcatttagtt 469
            ||||||||||||||||
Sbjct: 9375 tatgcagcatttagtt 9360


>Contig1.611 
          Length = 15221

 Score = 32.2 bits (16), Expect = 4.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 201  taacgcagatcttttg 216
            ||||||||||||||||
Sbjct: 5691 taacgcagatcttttg 5676


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9348
Number of Sequences: 3031
Number of extensions: 9348
Number of successful extensions: 26
Number of sequences better than 10.0: 9
length of query: 577
length of database: 37,878,070
effective HSP length: 17
effective length of query: 560
effective length of database: 37,826,543
effective search space: 21182864080
effective search space used: 21182864080
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)