BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1612_C11_F22ZT.tfa
         (210 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.1674                                                       34  0.37
Contig1.2566                                                       32  1.5
Contig1.1306                                                       32  1.5
Contig1.2518                                                       30  5.8
Contig1.2382                                                       30  5.8
Contig1.2250                                                       30  5.8
Contig1.1800                                                       30  5.8
Contig1.1772                                                       30  5.8
Contig1.1717                                                       30  5.8
Contig1.1492                                                       30  5.8
Contig1.1389                                                       30  5.8
Contig1.1097                                                       30  5.8
Contig1.963                                                        30  5.8
Contig1.913                                                        30  5.8

>Contig1.1674 
          Length = 38290

 Score = 34.2 bits (17), Expect = 0.37
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 47    caatcgctcacatcaaa 63
             |||||||||||||||||
Sbjct: 23803 caatcgctcacatcaaa 23819


>Contig1.2566 
          Length = 6397

 Score = 32.2 bits (16), Expect = 1.5
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 11  gccgcacttgttctgc 26
           ||||||||||||||||
Sbjct: 262 gccgcacttgttctgc 277


>Contig1.1306 
          Length = 54433

 Score = 32.2 bits (16), Expect = 1.5
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 166   acagcatcaatggcgc 181
             ||||||||||||||||
Sbjct: 20747 acagcatcaatggcgc 20762


>Contig1.2518 
          Length = 3847

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                               
Query: 189  acagcaggctgaataccat 207
            ||||||||||| |||||||
Sbjct: 2869 acagcaggctggataccat 2851


>Contig1.2382 
          Length = 10086

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 36   tatgcagtagccaat 50
            |||||||||||||||
Sbjct: 9089 tatgcagtagccaat 9075


>Contig1.2250 
          Length = 25617

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 71   cgactggcccaagtt 85
            |||||||||||||||
Sbjct: 6238 cgactggcccaagtt 6224


>Contig1.1800 
          Length = 26189

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 113  tgtcagcacccaaac 127
            |||||||||||||||
Sbjct: 5564 tgtcagcacccaaac 5550


>Contig1.1772 
          Length = 19361

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 110  gactgtcagcaccca 124
            |||||||||||||||
Sbjct: 1217 gactgtcagcaccca 1231


>Contig1.1717 
          Length = 29485

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 160   ttatccacagcatca 174
             |||||||||||||||
Sbjct: 20161 ttatccacagcatca 20147


>Contig1.1492 
          Length = 21139

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 56   acatcaaaagcaatg 70
            |||||||||||||||
Sbjct: 6912 acatcaaaagcaatg 6898


>Contig1.1389 
          Length = 8920

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 174  aatggcgctcatcat 188
            |||||||||||||||
Sbjct: 4377 aatggcgctcatcat 4363


>Contig1.1097 
          Length = 9719

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 2    tctttgtttgccgca 16
            |||||||||||||||
Sbjct: 1574 tctttgtttgccgca 1588


>Contig1.963 
          Length = 49615

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                           
Query: 70   gcgactggcccaagt 84
            |||||||||||||||
Sbjct: 2605 gcgactggcccaagt 2591


>Contig1.913 
          Length = 33263

 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 8     tttgccgcacttgtt 22
             |||||||||||||||
Sbjct: 19629 tttgccgcacttgtt 19643


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3391
Number of Sequences: 3031
Number of extensions: 3391
Number of successful extensions: 70
Number of sequences better than 10.0: 14
length of query: 210
length of database: 37,878,070
effective HSP length: 16
effective length of query: 194
effective length of database: 37,829,574
effective search space: 7338937356
effective search space used: 7338937356
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)