BLASTN 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= /home/local/jxu/web/Fgr/NCT3P/blasts/magnaporthe/../../seq/part
s/1612_D10_H20ZT.tfa
         (355 letters)

Database: magnaporthe
           3031 sequences; 37,878,070 total letters

Searching.......done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig1.2535                                                       32  2.6
Contig1.2514                                                       32  2.6
Contig1.2439                                                       32  2.6
Contig1.2343                                                       32  2.6
Contig1.2340                                                       32  2.6
Contig1.2000                                                       32  2.6
Contig1.1034                                                       32  2.6
Contig1.91                                                         32  2.6
Contig1.75                                                         32  2.6

>Contig1.2535 
          Length = 35833

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 176   tgttcctggtggtggg 191
             ||||||||||||||||
Sbjct: 11622 tgttcctggtggtggg 11637


>Contig1.2514 
          Length = 46669

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 195   acagcatcgtcaacac 210
             ||||||||||||||||
Sbjct: 36634 acagcatcgtcaacac 36619


>Contig1.2439 
          Length = 25954

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 225  tcctcgacggtctgga 240
            ||||||||||||||||
Sbjct: 8320 tcctcgacggtctgga 8335


>Contig1.2343 
          Length = 20333

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 200   atcgtcaacaccaagc 215
             ||||||||||||||||
Sbjct: 15705 atcgtcaacaccaagc 15720


>Contig1.2340 
          Length = 4996

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 200  atcgtcaacaccaagc 215
            ||||||||||||||||
Sbjct: 4816 atcgtcaacaccaagc 4831


>Contig1.2000 
          Length = 6352

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 284 tgttgcaaggaaacac 299
           ||||||||||||||||
Sbjct: 930 tgttgcaaggaaacac 915


>Contig1.1034 
          Length = 59206

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 327  tgttgctggaatctat 342
            ||||||||||||||||
Sbjct: 1390 tgttgctggaatctat 1375


>Contig1.91 
          Length = 23412

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 8     ttcaccacaccaccaa 23
             ||||||||||||||||
Sbjct: 14520 ttcaccacaccaccaa 14505


>Contig1.75 
          Length = 29421

 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 294  aaacactacataacag 309
            ||||||||||||||||
Sbjct: 6635 aaacactacataacag 6620


  Database: magnaporthe
    Posted date:  Jul 24, 2002 12:03 PM
  Number of letters in database: 37,878,070
  Number of sequences in database:  3031
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6305
Number of Sequences: 3031
Number of extensions: 6305
Number of successful extensions: 32
Number of sequences better than 10.0: 9
length of query: 355
length of database: 37,878,070
effective HSP length: 16
effective length of query: 339
effective length of database: 37,829,574
effective search space: 12824225586
effective search space used: 12824225586
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)