BLASTN 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast/FgrNCT3P_1607_D08_H15ZS5
.seq
(246 letters)
Database: /phillip/Ncr/MgIFAFSall
2061 sequences; 785,635 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGMY003AB10F.B mgmy003aB10f.b 7 447 26 2.2
MGAP010DF02F.B mgap010dF02f.b 18 514 26 2.2
MGAP008BG02F.B mgap008bG02f.b 23 461 26 2.2
MGAP007BG10F.B mgap007bG10f.b 23 556 26 2.2
MGAP007BB05F.B mgap007bB05f.b 19 513 26 2.2
MGMY006DD06F.B mgmy006dD06f.b 15 570 24 8.7
MGMY006DA07F.B mgmy006dA07f.b 0 491 24 8.7
MGMY006CG08F.B mgmy006cG08f.b 310 539 24 8.7
MGMY005DA10F.B mgmy005dA10f.b 163 582 24 8.7
MGMY005CE11F.B mgmy005cE11f.b 1 293 24 8.7
MGMY005BH06F.B mgmy005bH06f.b 9 415 24 8.7
MGMY005BH04F.B mgmy005bH04f.b 55 500 24 8.7
MGMY005BD12F.B mgmy005bD12f.b 6 313 24 8.7
MGMY005BB05F.B mgmy005bB05f.b 10 433 24 8.7
MGMY003DE06F.B mgmy003dE06f.b 88 319 24 8.7
MGMY003DC01F.B mgmy003dC01f.b 19 577 24 8.7
MGMY003BH02F.B mgmy003bH02f.b 12 470 24 8.7
MGMY003BH01F.B mgmy003bH01f.b 15 517 24 8.7
MGMY003BE07F.B mgmy003bE07f.b 12 487 24 8.7
MGMY003BB08F.B mgmy003bB08f.b 14 586 24 8.7
MGMY003AC04F.B mgmy003aC04f.b 2 398 24 8.7
MGMY002DG11F.B mgmy002dG11f.b 28 459 24 8.7
MGMY002DG02F.B mgmy002dG02f.b 27 509 24 8.7
MGMY002DD03F.B mgmy002dD03f.b 21 355 24 8.7
MGMY002CA10F.B mgmy002cA10f.b 27 472 24 8.7
MGMY002BG05F.B mgmy002bG05f.b 11 553 24 8.7
MGMY002BE04F.B mgmy002bE04f.b 12 609 24 8.7
MGMY002AG08F.B mgmy002aG08f.b 28 483 24 8.7
MGMY002AC01F.B mgmy002aC01f.b 33 383 24 8.7
MGMY001DH01F.B mgmy001dH01f.b 112 506 24 8.7
MGMY001CD06F.B mgmy001cD06f.b 14 509 24 8.7
MGMY001BD01F.B mgmy001bD01f.b 34 421 24 8.7
MGMY001BB07F.B mgmy001bB07f.b 21 362 24 8.7
MGMY001AF10F.B mgmy001aF10f.b 6 626 24 8.7
MGCM002CH10F.B mgcm002cH10f.b 24 440 24 8.7
MGCM002CD03F.B mgcm002cD03f.b 19 527 24 8.7
MGCM002CC08F.B mgcm002cC08f.b 20 532 24 8.7
MGCM002CB04F.B mgcm002cB04f.b 18 451 24 8.7
MGAP010DC10F.B mgap010dC10f.b 20 487 24 8.7
MGAP008DF11F.B mgap008dF11f.b 17 664 24 8.7
MGAP007CC01F.B mgap007cC01f.b 17 504 24 8.7
MGAP007CA08F.B mgap007cA08f.b 19 568 24 8.7
MGAP007AG08F.B mgap007aG08f.b 27 471 24 8.7
MGAP007AA01F.B mgap007aA01f.b 34 502 24 8.7
>MGMY003AB10F.B mgmy003aB10f.b 7 447
Length = 407
Score = 26.3 bits (13), Expect = 2.2
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 136 tgctaggcgttga 148
|||||||||||||
Sbjct: 226 tgctaggcgttga 214
>MGAP010DF02F.B mgap010dF02f.b 18 514
Length = 443
Score = 26.3 bits (13), Expect = 2.2
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 113 agggcgtcagggt 125
|||||||||||||
Sbjct: 331 agggcgtcagggt 319
>MGAP008BG02F.B mgap008bG02f.b 23 461
Length = 395
Score = 26.3 bits (13), Expect = 2.2
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 113 agggcgtcagggt 125
|||||||||||||
Sbjct: 315 agggcgtcagggt 303
>MGAP007BG10F.B mgap007bG10f.b 23 556
Length = 481
Score = 26.3 bits (13), Expect = 2.2
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 113 agggcgtcagggt 125
|||||||||||||
Sbjct: 97 agggcgtcagggt 85
>MGAP007BB05F.B mgap007bB05f.b 19 513
Length = 434
Score = 26.3 bits (13), Expect = 2.2
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 113 agggcgtcagggt 125
|||||||||||||
Sbjct: 324 agggcgtcagggt 312
>MGMY006DD06F.B mgmy006dD06f.b 15 570
Length = 488
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY006DA07F.B mgmy006dA07f.b 0 491
Length = 450
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY006CG08F.B mgmy006cG08f.b 310 539
Length = 229
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 58 gagcgtcacggt 69
||||||||||||
Sbjct: 217 gagcgtcacggt 206
>MGMY005DA10F.B mgmy005dA10f.b 163 582
Length = 400
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY005CE11F.B mgmy005cE11f.b 1 293
Length = 292
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 159 tggctggactgg 170
||||||||||||
Sbjct: 77 tggctggactgg 66
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 102 aaagaagtaaaa 113
||||||||||||
Sbjct: 246 aaagaagtaaaa 235
>MGMY005BH06F.B mgmy005bH06f.b 9 415
Length = 376
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY005BH04F.B mgmy005bH04f.b 55 500
Length = 422
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY005BD12F.B mgmy005bD12f.b 6 313
Length = 275
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 77 ctgaattgtctc 88
||||||||||||
Sbjct: 170 ctgaattgtctc 181
>MGMY005BB05F.B mgmy005bB05f.b 10 433
Length = 391
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 154 aggactggctgg 165
||||||||||||
Sbjct: 67 aggactggctgg 56
>MGMY003DE06F.B mgmy003dE06f.b 88 319
Length = 231
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 44 tcgccgcagcac 55
||||||||||||
Sbjct: 30 tcgccgcagcac 19
>MGMY003DC01F.B mgmy003dC01f.b 19 577
Length = 493
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 164 ggactggactgg 175
||||||||||||
Sbjct: 266 ggactggactgg 255
>MGMY003BH02F.B mgmy003bH02f.b 12 470
Length = 391
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY003BH01F.B mgmy003bH01f.b 15 517
Length = 451
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 107 agtaaaagggcg 118
||||||||||||
Sbjct: 212 agtaaaagggcg 201
>MGMY003BE07F.B mgmy003bE07f.b 12 487
Length = 408
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 154 aggactggctgg 165
||||||||||||
Sbjct: 68 aggactggctgg 57
>MGMY003BB08F.B mgmy003bB08f.b 14 586
Length = 518
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 107 agtaaaagggcg 118
||||||||||||
Sbjct: 172 agtaaaagggcg 161
>MGMY003AC04F.B mgmy003aC04f.b 2 398
Length = 358
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 47 ccgcagcacgag 58
||||||||||||
Sbjct: 76 ccgcagcacgag 87
>MGMY002DG11F.B mgmy002dG11f.b 28 459
Length = 394
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 154 aggactggctgg 165
||||||||||||
Sbjct: 67 aggactggctgg 56
>MGMY002DG02F.B mgmy002dG02f.b 27 509
Length = 439
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY002DD03F.B mgmy002dD03f.b 21 355
Length = 284
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 42 gttcgccgcagc 53
||||||||||||
Sbjct: 120 gttcgccgcagc 131
>MGMY002CA10F.B mgmy002cA10f.b 27 472
Length = 393
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 150 gaacaggactgg 161
||||||||||||
Sbjct: 87 gaacaggactgg 76
>MGMY002BG05F.B mgmy002bG05f.b 11 553
Length = 476
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 9 catggaagagct 20
||||||||||||
Sbjct: 141 catggaagagct 152
>MGMY002BE04F.B mgmy002bE04f.b 12 609
Length = 536
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 66 cggttgagagtc 77
||||||||||||
Sbjct: 465 cggttgagagtc 454
>MGMY002AG08F.B mgmy002aG08f.b 28 483
Length = 424
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 30 acaagaggagca 41
||||||||||||
Sbjct: 368 acaagaggagca 357
>MGMY002AC01F.B mgmy002aC01f.b 33 383
Length = 311
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 159 tggctggactgg 170
||||||||||||
Sbjct: 64 tggctggactgg 75
>MGMY001DH01F.B mgmy001dH01f.b 112 506
Length = 394
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 44 tcgccgcagcac 55
||||||||||||
Sbjct: 166 tcgccgcagcac 155
>MGMY001CD06F.B mgmy001cD06f.b 14 509
Length = 427
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 154 aggactggctgg 165
||||||||||||
Sbjct: 71 aggactggctgg 60
>MGMY001BD01F.B mgmy001bD01f.b 34 421
Length = 354
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 17 agctcgctcgtc 28
||||||||||||
Sbjct: 335 agctcgctcgtc 346
>MGMY001BB07F.B mgmy001bB07f.b 21 362
Length = 290
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 164 ggactggactgg 175
||||||||||||
Sbjct: 91 ggactggactgg 102
>MGMY001AF10F.B mgmy001aF10f.b 6 626
Length = 568
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 90 tgggtcatgttg 101
||||||||||||
Sbjct: 131 tgggtcatgttg 120
>MGCM002CH10F.B mgcm002cH10f.b 24 440
Length = 345
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 181 gcttggatgagc 192
||||||||||||
Sbjct: 138 gcttggatgagc 127
>MGCM002CD03F.B mgcm002cD03f.b 19 527
Length = 437
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 161 gctggactggac 172
||||||||||||
Sbjct: 147 gctggactggac 136
>MGCM002CC08F.B mgcm002cC08f.b 20 532
Length = 441
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 161 gctggactggac 172
||||||||||||
Sbjct: 147 gctggactggac 136
>MGCM002CB04F.B mgcm002cB04f.b 18 451
Length = 373
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 172 ctggattaggct 183
||||||||||||
Sbjct: 300 ctggattaggct 311
>MGAP010DC10F.B mgap010dC10f.b 20 487
Length = 415
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 212 gagcgggcgggt 223
||||||||||||
Sbjct: 329 gagcgggcgggt 318
>MGAP008DF11F.B mgap008dF11f.b 17 664
Length = 588
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 159 tggctggactgg 170
||||||||||||
Sbjct: 572 tggctggactgg 561
>MGAP007CC01F.B mgap007cC01f.b 17 504
Length = 419
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 61 cgtcacggttga 72
||||||||||||
Sbjct: 299 cgtcacggttga 288
>MGAP007CA08F.B mgap007cA08f.b 19 568
Length = 482
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 66 cggttgagagtc 77
||||||||||||
Sbjct: 421 cggttgagagtc 410
>MGAP007AG08F.B mgap007aG08f.b 27 471
Length = 392
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Minus
Query: 107 agtaaaagggcg 118
||||||||||||
Sbjct: 218 agtaaaagggcg 207
>MGAP007AA01F.B mgap007aA01f.b 34 502
Length = 435
Score = 24.3 bits (12), Expect = 8.7
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 4 atgtccatggaa 15
||||||||||||
Sbjct: 351 atgtccatggaa 362
Database: /phillip/Ncr/MgIFAFSall
Posted date: Feb 13, 2002 12:25 PM
Number of letters in database: 785,635
Number of sequences in database: 2061
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 112
Number of Sequences: 2061
Number of extensions: 112
Number of successful extensions: 45
Number of sequences better than 10.0: 44
length of query: 246
length of database: 785,635
effective HSP length: 13
effective length of query: 233
effective length of database: 758,842
effective search space: 176810186
effective search space used: 176810186
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 12 (24.3 bits)