BLASTN 2.1.3 [Apr-1-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast/FgrNCT3P_1610_B07_C14ZT.
seq
         (326 letters)

Database: /phillip/Ncr/MgIFAFSall
           2061 sequences; 785,635 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MGMY001CB05F.B mgmy001cB05f.b 123 557                                  28  0.75
MGMY006DF06F.B mgmy006dF06f.b 19 292                                   26  2.9
MGMY006DE06F.B mgmy006dE06f.b 17 497                                   26  2.9
MGMY006DA10F.B mgmy006dA10f.b 22 511                                   26  2.9
MGMY004AA10F.B mgmy004aA10f.b 33 551                                   26  2.9

>MGMY001CB05F.B mgmy001cB05f.b 123 557
          Length = 434

 Score = 28.2 bits (14), Expect = 0.75
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 264 gaggctggtgctga 277
           ||||||||||||||
Sbjct: 391 gaggctggtgctga 404



>MGMY006DF06F.B mgmy006dF06f.b 19 292
          Length = 209

 Score = 26.3 bits (13), Expect = 2.9
 Identities = 13/13 (100%)
 Strand = Plus / Minus

                       
Query: 64 tggagtggtacgc 76
          |||||||||||||
Sbjct: 83 tggagtggtacgc 71



>MGMY006DE06F.B mgmy006dE06f.b 17 497
          Length = 414

 Score = 26.3 bits (13), Expect = 2.9
 Identities = 13/13 (100%)
 Strand = Plus / Minus

                        
Query: 102 ccggaggtaccgt 114
           |||||||||||||
Sbjct: 174 ccggaggtaccgt 162



>MGMY006DA10F.B mgmy006dA10f.b 22 511
          Length = 428

 Score = 26.3 bits (13), Expect = 2.9
 Identities = 13/13 (100%)
 Strand = Plus / Minus

                        
Query: 102 ccggaggtaccgt 114
           |||||||||||||
Sbjct: 174 ccggaggtaccgt 162



>MGMY004AA10F.B mgmy004aA10f.b 33 551
          Length = 474

 Score = 26.3 bits (13), Expect = 2.9
 Identities = 13/13 (100%)
 Strand = Plus / Plus

                        
Query: 54  gagaagatcctgg 66
           |||||||||||||
Sbjct: 351 gagaagatcctgg 363



  Database: /phillip/Ncr/MgIFAFSall
    Posted date:  Feb 13, 2002 12:25 PM
  Number of letters in database: 785,635
  Number of sequences in database:  2061
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 86
Number of Sequences: 2061
Number of extensions: 86
Number of successful extensions: 21
Number of sequences better than 10.0: 5
length of query: 326
length of database: 785,635
effective HSP length: 13
effective length of query: 313
effective length of database: 758,842
effective search space: 237517546
effective search space used: 237517546
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 13 (26.3 bits)