TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast/FgrNCT3P_1611_A03_B05ZT.
seq
(371 letters)
Database: /phillip/Ncr/MgIFAFSall
2061 sequences; 785,635 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGMY004AG05F.B mgmy004aG05f.b 25 550 25 0.61
MGMY004AB09F.B mgmy004aB09f.b 26 639 24 1.6
MGCM001DF08F.B mgcm001dF08f.b 128 503 24 1.6
MGMY002AH07F.B mgmy002aH07f.b 28 547 23 2.2
MGMY002AF03F.B mgmy002aF03f.b 31 430 23 2.2
MGMY001DG05F.B mgmy001dG05f.b 113 438 23 2.2
MGMY005CC11F.B mgmy005cC11f.b 24 491 23 2.2
MGAP008DC07F.B mgap008dC07f.b 17 607 23 2.2
MGAP007BB09F.B mgap007bB09f.b 16 557 23 3.0
MGMY005BC06F.B mgmy005bC06f.b 239 492 23 3.0
MGAP007CA03F.B mgap007cA03f.b 115 565 23 3.0
MGAP008CC06F.B mgap008cC06f.b 25 560 23 3.0
MGMY003CH11F.B mgmy003cH11f.b 40 403 23 3.0
MGMY002CF02F.B mgmy002cF02f.b 6 431 23 3.0
MGAP007AD07F.B mgap007aD07f.b 16 643 23 3.0
MGCM002CA08F.B mgcm002cA08f.b 1 495 23 3.0
MGAP007BD08F.B mgap007bD08f.b 12 570 23 3.0
MGMY001AG04F.B mgmy001aG04f.b 1 491 22 4.1
MGAP010DF02F.B mgap010dF02f.b 18 514 22 4.1
MGAP007BB05F.B mgap007bB05f.b 19 513 22 4.1
MGCM001DG11F.B mgcm001dG11f.b 3 515 22 4.1
MGAP008BG02F.B mgap008bG02f.b 23 461 22 4.1
MGMY004AD04F.B mgmy004aD04f.b 33 542 22 4.1
MGAP008DC01F.B mgap008dC01f.b 147 640 22 4.1
MGMY003DH02F.B mgmy003dH02f.b 20 467 22 5.6
MGCM002DA05F.B mgcm002dA05f.b 1 405 22 5.6
MGCM002AA02F.B mgcm002aA02f.b 146 611 22 5.6
MGAP007BB06F.B mgap007bB06f.b 18 594 22 5.6
MGMY006AG01F.B mgmy006aG01f.b 15 512 22 5.6
MGMY002BF07F.B mgmy002bF07f.b 29 560 22 5.6
MGAP007BA03F.B mgap007bA03f.b 25 478 22 5.6
MGCM002CE06F.B mgcm002cE06f.b 17 520 22 5.6
MGMY001CD08F.B mgmy001cD08f.b 15 628 22 5.6
MGCM002CA02F.B mgcm002cA02f.b 21 530 22 5.6
MGAP007AG04F.B mgap007aG04f.b 15 466 22 5.6
MGMY001CE04F.B mgmy001cE04f.b 120 524 22 5.6
MGCM001DB12F.B mgcm001dB12f.b 155 615 22 5.6
MGMY006AB06F.B mgmy006aB06f.b 26 454 22 5.6
MGCM002CG10F.B mgcm002cG10f.b 22 535 22 5.6
MGMY006DC01F.B mgmy006dC01f.b 19 609 22 5.6
MGCM002AH07F.B mgcm002aH07f.b 13 529 22 5.6
MGMY001CE05F.B mgmy001cE05f.b 14 461 21 7.8
MGMY004CA10F.B mgmy004cA10f.b 49 218 21 7.8
MGAP007CD04F.B mgap007cD04f.b 137 434 21 7.8
MGMY002CC08F.B mgmy002cC08f.b 2 459 21 7.8
MGMY003DA07F.B mgmy003dA07f.b 94 624 21 7.8
MGMY003AD06F.B mgmy003aD06f.b 2 398 21 7.8
MGCM001DH01F.B mgcm001dH01f.b 30 451 21 7.8
MGAP007CA12F.B mgap007cA12f.b 16 522 21 7.8
MGMY001AD06F.B mgmy001aD06f.b 2 600 21 7.8
MGMY006DA04F.B mgmy006dA04f.b 14 414 21 7.8
MGCM002CF07F.B mgcm002cF07f.b 18 529 21 7.8
>MGMY004AG05F.B mgmy004aG05f.b 25 550
Length = 461
Score = 24.9 bits (48), Expect = 0.61
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2 / +3
Query: 370 WSCDRERWSSLPPSV 326
WSC R+ +LPP V
Sbjct: 153 WSCTGSRFKTLPPLV 197
>MGMY004AB09F.B mgmy004aB09f.b 26 639
Length = 549
Score = 23.5 bits (45), Expect = 1.6
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -2 / -2
Query: 370 WSCDRERWSSLPPSVRSHLPLTR 302
W C + PP+ + LP TR
Sbjct: 467 WGCSTHMAPTRPPAKTASLPATR 399
>MGCM001DF08F.B mgcm001dF08f.b 128 503
Length = 330
Score = 23.5 bits (45), Expect = 1.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1 / +3
Query: 344 FFASFCEISFASDEIRVMNST 282
FFASFC + ++ +ST
Sbjct: 96 FFASFCSLCSGQPKVSFFSST 158
>MGMY002AH07F.B mgmy002aH07f.b 28 547
Length = 465
Score = 23.1 bits (44), Expect = 2.2
Identities = 8/31 (25%), Positives = 13/31 (41%)
Frame = -3 / +3
Query: 213 RHNLLGSSFRQRQVFVAQCAVIILLPILGRC 121
R + S R ++ C + P+L RC
Sbjct: 174 RRQISYSPCRSHRLGSQDCCSVDCRPLLRRC 266
>MGMY002AF03F.B mgmy002aF03f.b 31 430
Length = 346
Score = 23.1 bits (44), Expect = 2.2
Identities = 8/31 (25%), Positives = 13/31 (41%)
Frame = -3 / +2
Query: 213 RHNLLGSSFRQRQVFVAQCAVIILLPILGRC 121
R + S R ++ C + P+L RC
Sbjct: 179 RRQISYSPCRSHRLGSQDCCSVDCRPLLRRC 271
>MGMY001DG05F.B mgmy001dG05f.b 113 438
Length = 325
Score = 23.1 bits (44), Expect = 2.2
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 82 ISCYHSYFIMPLPASTKYWQK 144
+ C HS++ P +++WQ+
Sbjct: 40 LPCQHSWWSARYPDRSQHWQR 102
>MGMY005CC11F.B mgmy005cC11f.b 24 491
Length = 403
Score = 23.1 bits (44), Expect = 2.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1 / -1
Query: 115 LPASTKYWQKYDNGTLCNEDLSLPEATAQKIVSEILPPQA 234
L +T W K + GT S P T ++ LPP +
Sbjct: 367 LRTATTQWHKMEFGTFF*IHCSCPRETPNH*NADRLPPDS 248
>MGAP008DC07F.B mgap008dC07f.b 17 607
Length = 524
Score = 23.1 bits (44), Expect = 2.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 203 FWAVASGSDKSSLHSVPL 150
+WA G ++SLHS+ L
Sbjct: 279 WWAPLGGQKRTSLHSLHL 226
>MGAP007BB09F.B mgap007bB09f.b 16 557
Length = 480
Score = 22.6 bits (43), Expect = 3.0
Identities = 9/24 (37%), Positives = 14/24 (57%)
Frame = +3 / +3
Query: 294 HPYLVRGK*DLTEGGKEDHRSRSH 365
+P+ G L +GG++ HRS H
Sbjct: 339 NPHHHGGAGRLPQGGRQHHRSGRH 410
>MGMY005BC06F.B mgmy005bC06f.b 239 492
Length = 253
Score = 22.6 bits (43), Expect = 3.0
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3 / -1
Query: 123 CWQRHDEIRVITRYLKDIVYSMLSMMVE 40
CW H E R+I R + +L V+
Sbjct: 88 CWISHQEERIIDRIVPKQEICILKQTVQ 5
>MGAP007CA03F.B mgap007cA03f.b 115 565
Length = 450
Score = 22.6 bits (43), Expect = 3.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 282 RRVHHPYLVRG 314
R V HPYLV+G
Sbjct: 383 RPVAHPYLVKG 415
>MGAP008CC06F.B mgap008cC06f.b 25 560
Length = 492
Score = 22.6 bits (43), Expect = 3.0
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 285 RVHHPYLVR 311
RVHHPY +R
Sbjct: 192 RVHHPYRLR 218
>MGMY003CH11F.B mgmy003cH11f.b 40 403
Length = 352
Score = 22.6 bits (43), Expect = 3.0
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +2 / +2
Query: 224 PRKQAWPL 247
PR Q WPL
Sbjct: 44 PRFQGWPL 67
>MGMY002CF02F.B mgmy002cF02f.b 6 431
Length = 404
Score = 22.6 bits (43), Expect = 3.0
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 367 SCDRERWSSLP 335
SCDRER ++LP
Sbjct: 177 SCDRERPNTLP 145
>MGAP007AD07F.B mgap007aD07f.b 16 643
Length = 566
Score = 22.6 bits (43), Expect = 3.0
Identities = 7/12 (58%), Positives = 9/12 (74%)
Frame = -3 / +1
Query: 150 IILLPILGRCWQ 115
+I LP+ RCWQ
Sbjct: 79 LIYLPLT*RCWQ 114
>MGCM002CA08F.B mgcm002cA08f.b 1 495
Length = 438
Score = 22.6 bits (43), Expect = 3.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1 / -2
Query: 245 KATPACGGKISDT 207
+ P GGK++DT
Sbjct: 119 RVRPGVGGKVADT 81
>MGAP007BD08F.B mgap007bD08f.b 12 570
Length = 503
Score = 22.6 bits (43), Expect = 3.0
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +3 / -1
Query: 195 CPKDCVGNLTPASRR 239
CP +C+ P +RR
Sbjct: 152 CPGECIARARPQARR 108
>MGMY001AG04F.B mgmy001aG04f.b 1 491
Length = 448
Score = 22.1 bits (42), Expect = 4.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 55 QH*IHYILQISCYHSYFIMPL 117
+H*++ I I + S+F PL
Sbjct: 30 RH*VNSIFFILFFFSFFPSPL 92
>MGAP010DF02F.B mgap010dF02f.b 18 514
Length = 443
Score = 22.1 bits (42), Expect = 4.1
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = +3 / +2
Query: 45 PSYSTLNTLYPSN 83
PS+ N LYPSN
Sbjct: 107 PSFLNENPLYPSN 145
>MGAP007BB05F.B mgap007bB05f.b 19 513
Length = 434
Score = 22.1 bits (42), Expect = 4.1
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = +3 / +1
Query: 45 PSYSTLNTLYPSN 83
PS+ N LYPSN
Sbjct: 100 PSFLNENPLYPSN 138
>MGCM001DG11F.B mgcm001dG11f.b 3 515
Length = 457
Score = 22.1 bits (42), Expect = 4.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1 / +2
Query: 154 GTLCNEDLSLPEATAQKIVSEILPP 228
G+L SLP A K E+LPP
Sbjct: 26 GSLITPRASLPTNPANKP*LELLPP 100
>MGAP008BG02F.B mgap008bG02f.b 23 461
Length = 395
Score = 22.1 bits (42), Expect = 4.1
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = +3 / +1
Query: 45 PSYSTLNTLYPSN 83
PS+ N LYPSN
Sbjct: 91 PSFLNENPLYPSN 129
>MGMY004AD04F.B mgmy004aD04f.b 33 542
Length = 467
Score = 22.1 bits (42), Expect = 4.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 80 KYLVITLISSCLCQHLPSIGR 142
+Y+V+ +++SC H P+I R
Sbjct: 93 QYVVL*MLASCRLIHRPAILR 31
>MGAP008DC01F.B mgap008dC01f.b 147 640
Length = 467
Score = 22.1 bits (42), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = -1 / -3
Query: 203 FWAVASGSDKSSLHSVPL 150
+WA G +SLHS+ L
Sbjct: 279 WWAPLGGQKSTSLHSLHL 226
>MGMY003DH02F.B mgmy003dH02f.b 20 467
Length = 390
Score = 21.7 bits (41), Expect = 5.6
Identities = 9/26 (34%), Positives = 13/26 (49%)
Frame = -1 / +3
Query: 191 ASGSDKSSLHSVPLSYFCQYLVDAGR 114
ASG + + CQ+L +AGR
Sbjct: 27 ASGRQRQQARP*GIVLCCQHLAEAGR 104
>MGCM002DA05F.B mgcm002dA05f.b 1 405
Length = 339
Score = 21.7 bits (41), Expect = 5.6
Identities = 8/22 (36%), Positives = 11/22 (49%)
Frame = -1 / -1
Query: 266 RSRASLAKATPACGGKISDTIF 201
R+ AS A ATP G+ +
Sbjct: 333 RAPASAADATPPSPGRCCCPLL 268
>MGCM002AA02F.B mgcm002aA02f.b 146 611
Length = 427
Score = 21.7 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -3 / -1
Query: 126 RCWQRHDEIR 97
RCW RH R
Sbjct: 271 RCWSRHGSAR 242
>MGAP007BB06F.B mgap007bB06f.b 18 594
Length = 515
Score = 21.7 bits (41), Expect = 5.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3 / -2
Query: 129 GRCWQRHDEIR 97
GRCW R D R
Sbjct: 169 GRCWARGDPSR 137
>MGMY006AG01F.B mgmy006aG01f.b 15 512
Length = 444
Score = 21.7 bits (41), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 263 SRASLAKATPACGGKIS 213
SR S TPACG +++
Sbjct: 162 SRYSSMVCTPACGAELA 112
>MGMY002BF07F.B mgmy002bF07f.b 29 560
Length = 476
Score = 21.7 bits (41), Expect = 5.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1 / +3
Query: 188 SGSDKSSLHSVPLSYFC 138
SG+D + SVP+S+ C
Sbjct: 366 SGND*ALTASVPVSFLC 416
>MGAP007BA03F.B mgap007bA03f.b 25 478
Length = 401
Score = 21.7 bits (41), Expect = 5.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / -1
Query: 127 TKYWQKYDNGTLCNEDLSLPEATAQKIVS 213
T +W+ + GTL + EAT I+S
Sbjct: 191 TNFWKGGETGTLPSVKRVAIEATYSAIIS 105
>MGCM002CE06F.B mgcm002cE06f.b 17 520
Length = 430
Score = 21.7 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -3 / -1
Query: 126 RCWQRHDEIR 97
RCW RH R
Sbjct: 232 RCWSRHGSAR 203
>MGMY001CD08F.B mgmy001cD08f.b 15 628
Length = 545
Score = 21.7 bits (41), Expect = 5.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2 / -1
Query: 367 SCDRERWSSLPPSVRSHLP 311
SC + W S S ++HLP
Sbjct: 365 SCPQSAWQSGRRSRQNHLP 309
>MGCM002CA02F.B mgcm002cA02f.b 21 530
Length = 438
Score = 21.7 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -3 / -2
Query: 126 RCWQRHDEIR 97
RCW RH R
Sbjct: 257 RCWSRHGSAR 228
>MGAP007AG04F.B mgap007aG04f.b 15 466
Length = 394
Score = 21.7 bits (41), Expect = 5.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2 / -3
Query: 367 SCDRERWSSLPPSVRSHLP 311
SC + W S S ++HLP
Sbjct: 362 SCPQSAWQSGRRSRQNHLP 306
>MGMY001CE04F.B mgmy001cE04f.b 120 524
Length = 404
Score = 21.7 bits (41), Expect = 5.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1 / +2
Query: 188 SGSDKSSLHSVPLSYFC 138
SG+D + SVP+S+ C
Sbjct: 332 SGND*ALTASVPVSFLC 382
>MGCM001DB12F.B mgcm001dB12f.b 155 615
Length = 405
Score = 21.7 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -3 / -3
Query: 126 RCWQRHDEIR 97
RCW RH R
Sbjct: 271 RCWSRHGSAR 242
>MGMY006AB06F.B mgmy006aB06f.b 26 454
Length = 384
Score = 21.7 bits (41), Expect = 5.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1 / +2
Query: 268 LIECCVEFITLISSEANEISQKEAKKTIAR 357
+++C I L +E +EIS +++TI +
Sbjct: 35 VLDCGKNKIWLDPNEVSEISNANSRQTIRK 124
>MGCM002CG10F.B mgcm002cG10f.b 22 535
Length = 441
Score = 21.7 bits (41), Expect = 5.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -3 / -2
Query: 126 RCWQRHDEIR 97
RCW RH R
Sbjct: 233 RCWSRHGSAR 204
>MGMY006DC01F.B mgmy006dC01f.b 19 609
Length = 380
Score = 21.7 bits (41), Expect = 5.6
Identities = 7/27 (25%), Positives = 15/27 (54%)
Frame = +1 / -2
Query: 73 ILQISCYHSYFIMPLPASTKYWQKYDN 153
+L+I C++ ++ S + WQ Y +
Sbjct: 133 VLKIVCFYDDHVVMDDLSNEPWQAYSD 53
>MGCM002AH07F.B mgcm002aH07f.b 13 529
Length = 447
Score = 21.7 bits (41), Expect = 5.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -2
Query: 275 SMRRSRASLAKATPACGG 222
S SRAS + + PAC G
Sbjct: 419 SWHPSRASTSGSGPACNG 366
>MGMY001CE05F.B mgmy001cE05f.b 14 461
Length = 392
Score = 21.2 bits (40), Expect = 7.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3 / +2
Query: 132 LGRCWQRHD 106
+GRCW+R +
Sbjct: 230 VGRCWRRQE 256
>MGMY004CA10F.B mgmy004cA10f.b 49 218
Length = 169
Score = 21.2 bits (40), Expect = 7.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 186 RQRQVFVAQCAVIILLPILGRCW 118
R RQV A+ + + P G CW
Sbjct: 115 RVRQVCWAKAVIHV*CPP*GSCW 47
>MGAP007CD04F.B mgap007cD04f.b 137 434
Length = 297
Score = 21.2 bits (40), Expect = 7.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +2 / +3
Query: 104 SSCLCQHLPSIGRSMITAH 160
S C C S G S TA
Sbjct: 114 SCCRCSRRCSFGLSRRTAR 170
>MGMY002CC08F.B mgmy002cC08f.b 2 459
Length = 433
Score = 21.2 bits (40), Expect = 7.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / +2
Query: 190 LPAATSLRCTVCRY 149
LPA RC VCR+
Sbjct: 77 LPA*PRERCQVCRW 118
>MGMY003DA07F.B mgmy003dA07f.b 94 624
Length = 530
Score = 21.2 bits (40), Expect = 7.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / -2
Query: 218 SYPRKQAWPL 247
SYPR WPL
Sbjct: 322 SYPRGIGWPL 293
>MGMY003AD06F.B mgmy003aD06f.b 2 398
Length = 371
Score = 21.2 bits (40), Expect = 7.8
Identities = 10/26 (38%), Positives = 12/26 (45%)
Frame = +3 / +1
Query: 219 LTPASRRGLCQGSS*SPHRMLRRVHH 296
LT SRRG+C P R + H
Sbjct: 94 LTRCSRRGVCARPRREPFREMAPSTH 171
>MGCM001DH01F.B mgcm001dH01f.b 30 451
Length = 373
Score = 21.2 bits (40), Expect = 7.8
Identities = 6/14 (42%), Positives = 8/14 (56%)
Frame = +3 / -2
Query: 195 CPKDCVGNLTPASR 236
CP C G P++R
Sbjct: 279 CPHPCYGRTKPSAR 238
>MGAP007CA12F.B mgap007cA12f.b 16 522
Length = 438
Score = 21.2 bits (40), Expect = 7.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / +1
Query: 346 SSLPPSVRSHLPLT 305
S PP+ R HL LT
Sbjct: 268 SHAPPTYRRHLSLT 309
>MGMY001AD06F.B mgmy001aD06f.b 2 600
Length = 542
Score = 21.2 bits (40), Expect = 7.8
Identities = 6/7 (85%), Positives = 7/7 (99%)
Frame = -2 / -1
Query: 256 LPWQRPR 236
LPW+RPR
Sbjct: 242 LPWRRPR 222
>MGMY006DA04F.B mgmy006dA04f.b 14 414
Length = 333
Score = 21.2 bits (40), Expect = 7.8
Identities = 9/24 (37%), Positives = 13/24 (53%)
Frame = +1 / -3
Query: 160 LCNEDLSLPEATAQKIVSEILPPQ 231
LC+ +LSL Q +E+ PQ
Sbjct: 262 LCSTNLSLASTA*QPFATEVELPQ 191
>MGCM002CF07F.B mgcm002cF07f.b 18 529
Length = 439
Score = 21.2 bits (40), Expect = 7.8
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = -1 / +1
Query: 287 STQHSMRRSRASLAKATPACG 225
ST S RRS + KAT + G
Sbjct: 355 STSPSARRSTRCVRKATSSSG 417
Database: /phillip/Ncr/MgIFAFSall
Posted date: Feb 13, 2002 12:25 PM
Number of letters in database: 785,635
Number of sequences in database: 2061
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 685557
Number of Sequences: 2061
Number of extensions: 8750
Number of successful extensions: 526
Number of sequences better than 10.0: 59
length of query: 123
length of database: 261,878
effective HSP length: 34
effective length of query: 89
effective length of database: 191,804
effective search space: 17070556
effective search space used: 17070556
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 39 (20.8 bits)