TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast/FgrNCT3P_1612_C11_F22ZT.
seq
(210 letters)
Database: /phillip/Ncr/MgIFAFSall
2061 sequences; 785,635 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGMY005DB03F.B mgmy005dB03f.b 24 571 23 1.3
MGAP007BG09F.B mgap007bG09f.b 23 569 22 1.7
MGAP007AB10F.B mgap007aB10f.b 17 538 22 1.7
MGAP007BH08F.B mgap007bH08f.b 48 703 22 1.7
MGCM002CH02F.B mgcm002cH02f.b 31 519 22 2.4
MGAP008DB09F.B mgap008dB09f.b 16 557 22 2.4
MGMY006BB08F.B mgmy006bB08f.b 172 355 22 2.4
MGCM002AF07F.B mgcm002aF07f.b 125 494 22 2.4
MGMY006AF12F.B mgmy006aF12f.b 18 560 22 2.4
MGMY006BE01F.B mgmy006bE01f.b 288 507 21 3.3
MGMY005AE11F.B mgmy005aE11f.b 239 409 21 3.3
MGMY004DB09F.B mgmy004dB09f.b 41 434 21 3.3
MGMY003BH10F.B mgmy003bH10f.b 12 495 21 3.3
MGMY003CE09F.B mgmy003cE09f.b 42 255 21 3.3
MGMY002DB11F.B mgmy002dB11f.b 4 340 21 3.3
MGMY003CH12F.B mgmy003cH12f.b 34 512 21 3.3
MGMY002DD05F.B mgmy002dD05f.b 28 435 21 3.3
MGMY005BB02F.B mgmy005bB02f.b 10 344 21 4.5
MGMY005CF03F.B mgmy005cF03f.b 26 333 21 4.5
MGMY005CC01F.B mgmy005cC01f.b 0 394 21 4.5
MGCM002AE04F.B mgcm002aE04f.b 19 544 21 4.5
MGMY002BG09F.B mgmy002bG09f.b 5 322 21 4.5
MGMY002AA03F.B mgmy002aA03f.b 32 456 20 6.2
MGAP007CF02F.B mgap007cF02f.b 114 646 20 6.2
MGMY004AC07F.B mgmy004aC07f.b 2 294 20 6.2
MGMY001DA05F.B mgmy001dA05f.b 108 485 20 6.2
MGMY003BG10F.B mgmy003bG10f.b 12 455 20 6.2
MGMY002CE10F.B mgmy002cE10f.b 31 572 20 8.5
MGMY001DE11F.B mgmy001dE11f.b 120 426 20 8.5
MGMY001CD04F.B mgmy001cD04f.b 124 585 20 8.5
MGAP010CC06F.B mgap010cC06f.b 110 560 20 8.5
MGMY003BG07F.B mgmy003bG07f.b 26 594 20 8.5
MGMY002AE04F.B mgmy002aE04f.b 82 321 20 8.5
MGAP008DB01F.B mgap008dB01f.b 0 614 20 8.5
MGAP008BH10F.B mgap008bH10f.b 28 422 20 8.5
MGAP008BC04F.B mgap008bC04f.b 18 394 20 8.5
MGMY003CH01F.B mgmy003cH01f.b 30 496 20 8.5
MGMY003BA09F.B mgmy003bA09f.b 16 575 20 8.5
MGMY001BG01F.B mgmy001bG01f.b 26 471 20 8.5
MGCM002CC05F.B mgcm002cC05f.b 1 442 20 8.5
MGAP010DF01F.B mgap010dF01f.b 22 550 20 8.5
>MGMY005DB03F.B mgmy005dB03f.b 24 571
Length = 493
Score = 22.6 bits (43), Expect = 1.3
Identities = 18/52 (34%), Positives = 23/52 (43%)
Frame = +1 / -3
Query: 46 PIAHIKSNATGPSCTFNTGNSRLSAPKPSLYSLRSGFMLSTASMALIIQQAE 201
P H+K+ S + S APK S S + ST+SMAL AE
Sbjct: 362 PKLHMKAFFVQKSVKRKSP*SHAKAPKLSFIYYVSETV*STSSMALSPVSAE 207
>MGAP007BG09F.B mgap007bG09f.b 23 569
Length = 494
Score = 22.1 bits (42), Expect = 1.7
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = +2 / +1
Query: 89 RLIREILDCQHPNPVCIL 142
R + IL+ HP+P C L
Sbjct: 103 RTSQSILNSPHPSPSCSL 156
>MGAP007AB10F.B mgap007aB10f.b 17 538
Length = 460
Score = 22.1 bits (42), Expect = 1.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 154 NRISKNTDWVWVLTV 110
N ++ DWV VLTV
Sbjct: 82 NEYTERADWVVVLTV 38
>MGAP007BH08F.B mgap007bH08f.b 48 703
Length = 603
Score = 22.1 bits (42), Expect = 1.7
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 32 CLCSSQSLTSK 64
C CSSQ+L SK
Sbjct: 59 CRCSSQNLLSK 91
>MGCM002CH02F.B mgcm002cH02f.b 31 519
Length = 429
Score = 21.7 bits (41), Expect = 2.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +2 / +3
Query: 161 YPQHQWRSS 187
YPQ +WRS+
Sbjct: 402 YPQQRWRSA 428
>MGAP008DB09F.B mgap008dB09f.b 16 557
Length = 474
Score = 21.7 bits (41), Expect = 2.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 106 SRLSAPKPSLYSLRSG 153
SRL P P+ ++RSG
Sbjct: 152 SRLRVPPPATLAVRSG 105
>MGMY006BB08F.B mgmy006bB08f.b 172 355
Length = 183
Score = 21.7 bits (41), Expect = 2.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 101 EILDCQHPNPVCI 139
++LD Q P P+C+
Sbjct: 97 DVLDVQIPFPICL 135
>MGCM002AF07F.B mgcm002aF07f.b 125 494
Length = 314
Score = 21.7 bits (41), Expect = 2.4
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1 / -3
Query: 159 HKTGSQRIQTGF 124
H G QRI+ G+
Sbjct: 231 HAQGKQRIRMGY 196
>MGMY006AF12F.B mgmy006aF12f.b 18 560
Length = 478
Score = 21.7 bits (41), Expect = 2.4
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1 / +3
Query: 159 HKTGSQRIQTGF 124
H G QRI+ G+
Sbjct: 345 HAQGKQRIRMGY 380
>MGMY006BE01F.B mgmy006bE01f.b 288 507
Length = 219
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/14 (42%), Positives = 12/14 (84%)
Frame = +2 / -3
Query: 5 LFAALVLPYCLCSS 46
+F++ V+P+CL +S
Sbjct: 52 VFSSQVMPFCLLAS 11
>MGMY005AE11F.B mgmy005aE11f.b 239 409
Length = 170
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 155 LCYPQHQWRSS 187
LC P+++W SS
Sbjct: 142 LCRPRYRWTSS 110
>MGMY004DB09F.B mgmy004dB09f.b 41 434
Length = 373
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2 / -2
Query: 206 WYSACCMMSAI 174
W SACC+ + I
Sbjct: 243 WSSACCICATI 211
>MGMY003BH10F.B mgmy003bH10f.b 12 495
Length = 416
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/14 (42%), Positives = 12/14 (84%)
Frame = +2 / -1
Query: 5 LFAALVLPYCLCSS 46
+F++ V+P+CL +S
Sbjct: 299 VFSSQVMPFCLLAS 258
>MGMY003CE09F.B mgmy003cE09f.b 42 255
Length = 213
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 155 LCYPQHQWRSS 187
LC P+++W SS
Sbjct: 186 LCRPRYRWTSS 154
>MGMY002DB11F.B mgmy002dB11f.b 4 340
Length = 336
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 155 LCYPQHQWRSS 187
LC P+++W SS
Sbjct: 95 LCRPRYRWTSS 63
>MGMY003CH12F.B mgmy003cH12f.b 34 512
Length = 452
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/14 (42%), Positives = 12/14 (84%)
Frame = +2 / -3
Query: 5 LFAALVLPYCLCSS 46
+F++ V+P+CL +S
Sbjct: 282 VFSSQVMPFCLLAS 241
>MGMY002DD05F.B mgmy002dD05f.b 28 435
Length = 364
Score = 21.2 bits (40), Expect = 3.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 155 LCYPQHQWRSS 187
LC P+++W SS
Sbjct: 81 LCRPRYRWTSS 49
>MGMY005BB02F.B mgmy005bB02f.b 10 344
Length = 305
Score = 20.8 bits (39), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 116 DSLEFPVLNVQLG 78
DSLEFP+L + G
Sbjct: 234 DSLEFPLLRLCQG 272
>MGMY005CF03F.B mgmy005cF03f.b 26 333
Length = 243
Score = 20.8 bits (39), Expect = 4.5
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +2 / +1
Query: 158 CYPQHQWR 181
C PQ QWR
Sbjct: 160 CLPQPQWR 183
>MGMY005CC01F.B mgmy005cC01f.b 0 394
Length = 351
Score = 20.8 bits (39), Expect = 4.5
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 104 ILDCQHPNP 130
+L C+HP P
Sbjct: 126 VLSCRHPRP 152
>MGCM002AE04F.B mgcm002aE04f.b 19 544
Length = 459
Score = 20.8 bits (39), Expect = 4.5
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = -2 / +3
Query: 116 DSLEFPVLNVQLGPVALL 63
D + FP +QLGP L+
Sbjct: 183 DWMRFPAGRLQLGPQRLV 236
>MGMY002BG09F.B mgmy002bG09f.b 5 322
Length = 278
Score = 20.8 bits (39), Expect = 4.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3 / +1
Query: 54 SHQKQCDWPKLH 89
SHQ D P+LH
Sbjct: 178 SHQHPLDHPRLH 213
>MGMY002AA03F.B mgmy002aA03f.b 32 456
Length = 371
Score = 20.3 bits (38), Expect = 6.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1 / +1
Query: 61 KSNATGPSCTF 93
K NAT P C F
Sbjct: 67 KQNATPPPCPF 99
>MGAP007CF02F.B mgap007cF02f.b 114 646
Length = 532
Score = 20.3 bits (38), Expect = 6.2
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +1 / -1
Query: 73 TGPSCTFNTGNSRLSAPKPSLYSLRSGFMLSTASM 177
TGPS T + + P LRS F + +M
Sbjct: 358 TGPSLLLTTLTASVGGSVPI*RRLRSSFGTGSEAM 254
>MGMY004AC07F.B mgmy004aC07f.b 2 294
Length = 256
Score = 20.3 bits (38), Expect = 6.2
Identities = 5/8 (62%), Positives = 8/8 (99%)
Frame = +2 / +1
Query: 146 DPVLCYPQ 169
DP+LC+P+
Sbjct: 4 DPLLCFPK 27
>MGMY001DA05F.B mgmy001dA05f.b 108 485
Length = 377
Score = 20.3 bits (38), Expect = 6.2
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +3 / -3
Query: 183 HHTAG*IP 206
HH +G* P
Sbjct: 75 HHMSG*RP 52
>MGMY003BG10F.B mgmy003bG10f.b 12 455
Length = 376
Score = 20.3 bits (38), Expect = 6.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +1
Query: 146 DPVLCYPQHQWRSSYSRL 199
DP LC P+ + S Y L
Sbjct: 238 DPALCSPEAKEGSCYCGL 291
>MGMY002CE10F.B mgmy002cE10f.b 31 572
Length = 492
Score = 19.8 bits (37), Expect = 8.5
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = -1 / +3
Query: 174 *CCG*HKTGSQR 139
*CC K+GSQR
Sbjct: 27 *CCPHPKSGSQR 62
>MGMY001DE11F.B mgmy001dE11f.b 120 426
Length = 306
Score = 19.8 bits (37), Expect = 8.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1 / -3
Query: 1 VFVCRTCSALL 33
+FVC CS LL
Sbjct: 217 LFVCLFCSCLL 185
>MGMY001CD04F.B mgmy001cD04f.b 124 585
Length = 461
Score = 19.8 bits (37), Expect = 8.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1 / +1
Query: 4 FVCRTCSAL 30
FVCR C A+
Sbjct: 43 FVCRQCRAI 69
>MGAP010CC06F.B mgap010cC06f.b 110 560
Length = 450
Score = 19.8 bits (37), Expect = 8.5
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +2 / -1
Query: 158 CYPQHQWR 181
C PQ+ WR
Sbjct: 387 CRPQYNWR 364
>MGMY003BG07F.B mgmy003bG07f.b 26 594
Length = 515
Score = 19.8 bits (37), Expect = 8.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1 / +2
Query: 4 FVCRTCSAL 30
FVCR C A+
Sbjct: 77 FVCRQCRAI 103
>MGMY002AE04F.B mgmy002aE04f.b 82 321
Length = 239
Score = 19.8 bits (37), Expect = 8.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3 / +3
Query: 178 PLMLWIT*NRISKNT 134
PL+ W T* R + +T
Sbjct: 81 PLLSWAT*TRTATST 125
>MGAP008DB01F.B mgap008dB01f.b 0 614
Length = 561
Score = 19.8 bits (37), Expect = 8.5
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2 / -3
Query: 113 CQHPNPVCIL*DPVL 157
C P PVC++ +L
Sbjct: 271 CSAPLPVCVVLWWLL 227
>MGAP008BH10F.B mgap008bH10f.b 28 422
Length = 351
Score = 19.8 bits (37), Expect = 8.5
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1 / +3
Query: 22 SALLFMQ*PIAHIKSNATGPSCTFNTGNSRLSAPKPSLYS 141
S L+F + + S P+C + P+PS Y+
Sbjct: 72 STLVFRLSALIVLHSRNPAPNCGARHDLASQPVPQPSTYA 191
>MGAP008BC04F.B mgap008bC04f.b 18 394
Length = 354
Score = 19.8 bits (37), Expect = 8.5
Identities = 4/9 (44%), Positives = 6/9 (66%)
Frame = +3 / -1
Query: 51 RSHQKQCDW 77
R +K+C W
Sbjct: 288 RRRKKRCPW 262
>MGMY003CH01F.B mgmy003cH01f.b 30 496
Length = 435
Score = 19.8 bits (37), Expect = 8.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3 / +2
Query: 178 PLMLWIT*NRISKNT 134
PL+ W T* R + +T
Sbjct: 152 PLLSWAT*TRTATST 196
>MGMY003BA09F.B mgmy003bA09f.b 16 575
Length = 435
Score = 19.8 bits (37), Expect = 8.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3 / +2
Query: 178 PLMLWIT*NRISKNT 134
PL+ W T* R + +T
Sbjct: 152 PLLSWAT*TRTATST 196
>MGMY001BG01F.B mgmy001bG01f.b 26 471
Length = 408
Score = 19.8 bits (37), Expect = 8.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3 / -2
Query: 117 STQTQSVFFEIRFYVIHSINGA 182
+T QS EI F+V++ G
Sbjct: 254 TTAGQSAHTEILFFVLNWS*GG 189
>MGCM002CC05F.B mgcm002cC05f.b 1 442
Length = 389
Score = 19.8 bits (37), Expect = 8.5
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = +2 / +1
Query: 107 LDCQHPN 127
L CQHP
Sbjct: 145 LVCQHPR 165
>MGAP010DF01F.B mgap010dF01f.b 22 550
Length = 476
Score = 19.8 bits (37), Expect = 8.5
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1 / +1
Query: 22 SALLFMQ*PIAHIKSNATGPSCTFNTGNSRLSAPKPSLYS 141
S L+F + + S P+C + P+PS Y+
Sbjct: 118 STLVFRLSALIVLHSRNPAPNCGARHDLASQPVPQPSTYA 237
Database: /phillip/Ncr/MgIFAFSall
Posted date: Feb 13, 2002 12:25 PM
Number of letters in database: 785,635
Number of sequences in database: 2061
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 434403
Number of Sequences: 2061
Number of extensions: 4253
Number of successful extensions: 347
Number of sequences better than 10.0: 50
length of query: 70
length of database: 261,878
effective HSP length: 32
effective length of query: 37
effective length of database: 195,926
effective search space: 7249262
effective search space used: 7249262
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 37 (19.8 bits)