BLASTN 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast/FgrNCT3P_Fgr_9_K06.seq
(734 letters)
Database: /phillip/Ncr/MgIFAFSall
2061 sequences; 785,635 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGMY002AF10F.B mgmy002aF10f.b 30 546 379 e-106
MGMY006DD04F.B mgmy006dD04f.b 15 451 32 0.11
MGMY006AH11F.B mgmy006aH11f.b 20 515 28 1.7
MGMY006AE04F.B mgmy006aE04f.b 20 542 28 1.7
MGMY006AC03F.B mgmy006aC03f.b 15 560 28 1.7
MGMY006AC01F.B mgmy006aC01f.b 29 547 28 1.7
MGMY005DG10F.B mgmy005dG10f.b 10 505 28 1.7
MGMY005BC09F.B mgmy005bC09f.b 11 527 28 1.7
MGMY005AC05F.B mgmy005aC05f.b 160 500 28 1.7
MGMY004AG11F.B mgmy004aG11f.b 22 540 28 1.7
MGMY003BD11F.B mgmy003bD11f.b 10 484 28 1.7
MGMY003BD04F.B mgmy003bD04f.b 11 550 28 1.7
MGMY003AB03F.B mgmy003aB03f.b 2 340 28 1.7
MGMY003AA07F.B mgmy003aA07f.b 2 437 28 1.7
MGMY002DB01F.B mgmy002dB01f.b 31 312 28 1.7
MGMY002AE03F.B mgmy002aE03f.b 29 581 28 1.7
MGMY002AA12F.B mgmy002aA12f.b 35 279 28 1.7
MGMY001CA06F.B mgmy001cA06f.b 120 476 28 1.7
MGMY001AG11F.B mgmy001aG11f.b 176 483 28 1.7
MGCM001DG02F.B mgcm001dG02f.b 159 545 28 1.7
MGAP008DD07F.B mgap008dD07f.b 27 613 28 1.7
MGAP008BD07F.B mgap008bD07f.b 26 541 28 1.7
MGAP007BF05F.B mgap007bF05f.b 16 573 28 1.7
MGMY006AB12F.B mgmy006aB12f.b 14 495 26 6.8
MGMY005CD05F.B mgmy005cD05f.b 2 487 26 6.8
MGMY004CF03F.B mgmy004cF03f.b 43 384 26 6.8
MGMY003CB09F.B mgmy003cB09f.b 18 314 26 6.8
MGMY003BF04F.B mgmy003bF04f.b 16 591 26 6.8
MGMY003BD07F.B mgmy003bD07f.b 14 521 26 6.8
MGMY003AE08F.B mgmy003aE08f.b 1 338 26 6.8
MGMY002DF02F.B mgmy002dF02f.b 27 408 26 6.8
MGMY002DB03F.B mgmy002dB03f.b 23 539 26 6.8
MGMY002CB06F.B mgmy002cB06f.b 88 540 26 6.8
MGMY001BH04F.B mgmy001bH04f.b 162 456 26 6.8
MGMY001AE09F.B mgmy001aE09f.b 1 467 26 6.8
MGCM002DC08F.B mgcm002dC08f.b 0 420 26 6.8
MGCM002CD04F.B mgcm002cD04f.b 24 403 26 6.8
MGCM002AG06F.B mgcm002aG06f.b 2 489 26 6.8
MGCM001DG12F.B mgcm001dG12f.b 23 477 26 6.8
MGCM001DF03F.B mgcm001dF03f.b 18 361 26 6.8
MGCM001DE07F.B mgcm001dE07f.b 20 426 26 6.8
MGCM001DE02F.B mgcm001dE02f.b 4 493 26 6.8
MGCM001DB04F.B mgcm001dB04f.b 127 578 26 6.8
MGAP010DB03F.B mgap010dB03f.b 31 481 26 6.8
MGAP008CF11F.B mgap008cF11f.b 25 498 26 6.8
MGAP008CE05F.B mgap008cE05f.b 23 573 26 6.8
MGAP008CD03F.B mgap008cD03f.b 50 542 26 6.8
MGAP008CB07F.B mgap008cB07f.b 22 494 26 6.8
MGAP008CA05F.B mgap008cA05f.b 25 500 26 6.8
MGAP007BF04F.B mgap007bF04f.b 25 519 26 6.8
MGAP007BB06F.B mgap007bB06f.b 18 594 26 6.8
>MGMY002AF10F.B mgmy002aF10f.b 30 546
Length = 459
Score = 379 bits (191), Expect = e-106
Identities = 393/459 (85%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 259 ggagctcgacatttacgccagcatcagcttgatcaagaacatccccggctacgagacccg 318
|||||||||||| |||||| |||| | |||||||||||||||||||||||||||| |
Sbjct: 1 ggagctcgacatctacgcctccatctccctgatcaagaacatccccggctacgagacaag 60
Query: 319 ccacaaggacgtcgacctgtgcatcatccgagagaacaccgagggtgagtactctggtct 378
|||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||
Sbjct: 61 gcacaaggacgtcgacctgtgcatcattcgtgagaacaccgagggtgaatacagtggtct 120
Query: 379 tgagcaccagagcgtcgagggtgtcgtcgagtccctcaagatcatcacccgcgccaagtc 438
||||||||| |||| |||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 121 ggagcaccagtccgtcccgggtgttgtcgagtctctcaagatcatcacccgtgccaagtc 180
Query: 439 tgagcgtatcgccaggttcgccttctctttcgccctcgcaaacggccgatccaaggttac 498
|||||| || ||| ||| |||||| || |||||||| ||| ||| ||||||||
Sbjct: 181 tgagcgcatttccaagtttgccttcagctttgccctcgccaacaaccgcaagaaggttac 240
Query: 499 ttgcatccacaaggccaacatcatgaagcttgccgacggtctcttccgcagcaccttcca 558
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 ttgcatccacaaggccaacatcatgaagcttgccgacggtcttttccgcagcaccttcca 300
Query: 559 ccaggtcgccaaggactaccccaccctcgagaccaacgacatgattgtcgacaacgcctc 618
|||| |||||||| ||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 301 ccagactgccaaggagtacccgacactcgaggctaacgacatgattgtcgacaacgccag 360
Query: 619 catgcaggctgtctctcgtcctcagcagttcgacgttatggtcatgcctaacctttacgg 678
||||||| |||| || || ||||||||||| ||| |||||||||| |||||||||||
Sbjct: 361 catgcagtgtgtcagccgcccgcagcagttcgatgttctggtcatgcccaacctttacgg 420
Query: 679 tggtatcctctcc-acattggcgctgcccttgttggtgg 716
||| ||||| ||| |||| || || ||||| ||||||||
Sbjct: 421 tggcatcctgtccaacatcggtgccgccctggttggtgg 459
>MGMY006DD04F.B mgmy006dD04f.b 15 451
Length = 369
Score = 32.2 bits (16), Expect = 0.11
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 411 ccctcaagatcatcacccgc 430
|||||||||||| |||||||
Sbjct: 232 ccctcaagatcaccacccgc 251
>MGMY006AH11F.B mgmy006aH11f.b 20 515
Length = 444
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 168 aggtcgccaaggac 181
>MGMY006AE04F.B mgmy006aE04f.b 20 542
Length = 458
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 155 aggtcgccaaggac 168
>MGMY006AC03F.B mgmy006aC03f.b 15 560
Length = 477
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 138 aggtcgccaaggac 151
>MGMY006AC01F.B mgmy006aC01f.b 29 547
Length = 465
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 138 aggtcgccaaggac 151
>MGMY005DG10F.B mgmy005dG10f.b 10 505
Length = 451
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 283 cagcttgatcaaga 296
||||||||||||||
Sbjct: 171 cagcttgatcaaga 184
>MGMY005BC09F.B mgmy005bC09f.b 11 527
Length = 479
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 138 aggtcgccaaggac 151
>MGMY005AC05F.B mgmy005aC05f.b 160 500
Length = 340
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 21 aggtcgccaaggac 34
>MGMY004AG11F.B mgmy004aG11f.b 22 540
Length = 453
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 283 cagcttgatcaaga 296
||||||||||||||
Sbjct: 80 cagcttgatcaaga 93
>MGMY003BD11F.B mgmy003bD11f.b 10 484
Length = 406
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 61 aggtcgccaaggac 74
>MGMY003BD04F.B mgmy003bD04f.b 11 550
Length = 472
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 164 aggtcgccaaggac 177
>MGMY003AB03F.B mgmy003aB03f.b 2 340
Length = 299
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 283 cagcttgatcaaga 296
||||||||||||||
Sbjct: 171 cagcttgatcaaga 184
>MGMY003AA07F.B mgmy003aA07f.b 2 437
Length = 397
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 611 aacgcctccatgca 624
||||||||||||||
Sbjct: 148 aacgcctccatgca 135
>MGMY002DB01F.B mgmy002dB01f.b 31 312
Length = 248
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 154 aggtcgccaaggac 167
>MGMY002AE03F.B mgmy002aE03f.b 29 581
Length = 492
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 155 aggtcgccaaggac 168
>MGMY002AA12F.B mgmy002aA12f.b 35 279
Length = 191
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 502 catccacaaggcca 515
||||||||||||||
Sbjct: 74 catccacaaggcca 87
>MGMY001CA06F.B mgmy001cA06f.b 120 476
Length = 356
Score = 28.2 bits (14), Expect = 1.7
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 123 agggcgccggccgcactg 140
||||| ||||||||||||
Sbjct: 246 agggctccggccgcactg 263
>MGMY001AG11F.B mgmy001aG11f.b 176 483
Length = 282
Score = 28.2 bits (14), Expect = 1.7
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 123 agggcgccggccgcactg 140
||||| ||||||||||||
Sbjct: 101 agggctccggccgcactg 118
>MGCM001DG02F.B mgcm001dG02f.b 159 545
Length = 350
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 384 accagagcgtcgag 397
||||||||||||||
Sbjct: 280 accagagcgtcgag 267
>MGAP008DD07F.B mgap008dD07f.b 27 613
Length = 531
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 39 ccgaggttgccgag 52
||||||||||||||
Sbjct: 23 ccgaggttgccgag 36
>MGAP008BD07F.B mgap008bD07f.b 26 541
Length = 472
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 158 aggtcgccaaggac 171
>MGAP007BF05F.B mgap007bF05f.b 16 573
Length = 501
Score = 28.2 bits (14), Expect = 1.7
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 561 aggtcgccaaggac 574
||||||||||||||
Sbjct: 156 aggtcgccaaggac 169
>MGMY006AB12F.B mgmy006aB12f.b 14 495
Length = 413
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 419 atcatcacccgcg 431
|||||||||||||
Sbjct: 66 atcatcacccgcg 78
>MGMY005CD05F.B mgmy005cD05f.b 2 487
Length = 429
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 528 ttgccgacggtct 540
|||||||||||||
Sbjct: 406 ttgccgacggtct 394
>MGMY004CF03F.B mgmy004cF03f.b 43 384
Length = 341
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 179 aacaagctcggcc 191
|||||||||||||
Sbjct: 210 aacaagctcggcc 222
>MGMY003CB09F.B mgmy003cB09f.b 18 314
Length = 296
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 528 ttgccgacggtct 540
|||||||||||||
Sbjct: 124 ttgccgacggtct 112
>MGMY003BF04F.B mgmy003bF04f.b 16 591
Length = 512
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 419 atcatcacccgcg 431
|||||||||||||
Sbjct: 36 atcatcacccgcg 48
>MGMY003BD07F.B mgmy003bD07f.b 14 521
Length = 442
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 678 gtggtatcctctc 690
|||||||||||||
Sbjct: 25 gtggtatcctctc 13
>MGMY003AE08F.B mgmy003aE08f.b 1 338
Length = 311
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 400 tgtcgtcgagtcc 412
|||||||||||||
Sbjct: 295 tgtcgtcgagtcc 283
>MGMY002DF02F.B mgmy002dF02f.b 27 408
Length = 337
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 121 cgagggcgccggc 133
|||||||||||||
Sbjct: 128 cgagggcgccggc 116
>MGMY002DB03F.B mgmy002dB03f.b 23 539
Length = 472
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 380 gagcaccagagcg 392
|||||||||||||
Sbjct: 400 gagcaccagagcg 388
>MGMY002CB06F.B mgmy002cB06f.b 88 540
Length = 452
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 348 gagagaacaccga 360
|||||||||||||
Sbjct: 195 gagagaacaccga 207
>MGMY001BH04F.B mgmy001bH04f.b 162 456
Length = 294
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 304 cggctacgagacc 316
|||||||||||||
Sbjct: 161 cggctacgagacc 173
>MGMY001AE09F.B mgmy001aE09f.b 1 467
Length = 410
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 432 ccaagtctgagcg 444
|||||||||||||
Sbjct: 392 ccaagtctgagcg 380
>MGCM002DC08F.B mgcm002dC08f.b 0 420
Length = 376
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 68 ttcaaggccgaca 80
|||||||||||||
Sbjct: 264 ttcaaggccgaca 276
>MGCM002CD04F.B mgcm002cD04f.b 24 403
Length = 308
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 466 tttcgccctcgca 478
|||||||||||||
Sbjct: 162 tttcgccctcgca 174
>MGCM002AG06F.B mgcm002aG06f.b 2 489
Length = 443
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 690 ccacattggcgct 702
|||||||||||||
Sbjct: 223 ccacattggcgct 235
>MGCM001DG12F.B mgcm001dG12f.b 23 477
Length = 400
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 76 cgacaacgtcccc 88
|||||||||||||
Sbjct: 82 cgacaacgtcccc 94
>MGCM001DF03F.B mgcm001dF03f.b 18 361
Length = 272
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 690 ccacattggcgct 702
|||||||||||||
Sbjct: 247 ccacattggcgct 259
>MGCM001DE07F.B mgcm001dE07f.b 20 426
Length = 339
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 65 gtcttcaaggccg 77
|||||||||||||
Sbjct: 308 gtcttcaaggccg 296
>MGCM001DE02F.B mgcm001dE02f.b 4 493
Length = 435
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 65 gtcttcaaggccg 77
|||||||||||||
Sbjct: 308 gtcttcaaggccg 296
>MGCM001DB04F.B mgcm001dB04f.b 127 578
Length = 396
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 415 caagatcatcacc 427
|||||||||||||
Sbjct: 91 caagatcatcacc 103
>MGAP010DB03F.B mgap010dB03f.b 31 481
Length = 407
Score = 26.3 bits (13), Expect = 6.8
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 459 ccttctctttcgccctc 475
||||| |||||||||||
Sbjct: 16 ccttcgctttcgccctc 32
>MGAP008CF11F.B mgap008cF11f.b 25 498
Length = 430
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 547 cagcaccttccac 559
|||||||||||||
Sbjct: 149 cagcaccttccac 137
>MGAP008CE05F.B mgap008cE05f.b 23 573
Length = 506
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 37 taccgaggttgcc 49
|||||||||||||
Sbjct: 312 taccgaggttgcc 324
>MGAP008CD03F.B mgap008cD03f.b 50 542
Length = 492
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 553 cttccaccaggtc 565
|||||||||||||
Sbjct: 246 cttccaccaggtc 258
>MGAP008CB07F.B mgap008cB07f.b 22 494
Length = 421
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 690 ccacattggcgct 702
|||||||||||||
Sbjct: 345 ccacattggcgct 357
>MGAP008CA05F.B mgap008cA05f.b 25 500
Length = 432
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 553 cttccaccaggtc 565
|||||||||||||
Sbjct: 207 cttccaccaggtc 219
>MGAP007BF04F.B mgap007bF04f.b 25 519
Length = 442
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 676 cggtggtatcctc 688
|||||||||||||
Sbjct: 110 cggtggtatcctc 98
>MGAP007BB06F.B mgap007bB06f.b 18 594
Length = 515
Score = 26.3 bits (13), Expect = 6.8
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 380 gagcaccagagcg 392
|||||||||||||
Sbjct: 375 gagcaccagagcg 363
Database: /phillip/Ncr/MgIFAFSall
Posted date: Feb 13, 2002 12:25 PM
Number of letters in database: 785,635
Number of sequences in database: 2061
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 511
Number of Sequences: 2061
Number of extensions: 511
Number of successful extensions: 170
Number of sequences better than 10.0: 51
length of query: 734
length of database: 785,635
effective HSP length: 14
effective length of query: 720
effective length of database: 756,781
effective search space: 544882320
effective search space used: 544882320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 13 (26.3 bits)