BLASTN 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast/FgrNCT3P_cl123ct138cn151
.seq
(768 letters)
Database: /phillip/Ncr/MgIFAFSall
2061 sequences; 785,635 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGMY005DE08F.B mgmy005dE08f.b 3 424 323 2e-89
MGMY001DH10F.B mgmy001dH10f.b 121 452 317 1e-87
MGCM001DH02F.B mgcm001dH02f.b 19 463 291 8e-80
MGMY002CC02F.B mgmy002cC02f.b 0 275 266 4e-72
MGMY003AD10F.B mgmy003aD10f.b 2 260 143 4e-35
MGCM001DG01F.B mgcm001dG01f.b 0 386 34 0.029
MGMY003BD07F.B mgmy003bD07f.b 14 521 30 0.45
MGCM002CE09F.B mgcm002cE09f.b 20 529 30 0.45
MGMY006AG02F.B mgmy006aG02f.b 16 492 28 1.8
MGMY005AG07F.B mgmy005aG07f.b 183 481 28 1.8
MGMY003BD01F.B mgmy003bD01f.b 16 408 28 1.8
MGMY001AB07F.B mgmy001aB07f.b 2 553 28 1.8
MGCM002AE12F.B mgcm002aE12f.b 3 347 28 1.8
MGCM002AC04F.B mgcm002aC04f.b 16 508 28 1.8
MGCM002AC02F.B mgcm002aC02f.b 153 415 28 1.8
MGCM001DB11F.B mgcm001dB11f.b 22 413 28 1.8
MGMY006DD07F.B mgmy006dD07f.b 176 456 26 7.1
MGMY006DD03F.B mgmy006dD03f.b 18 582 26 7.1
MGMY005CF09F.B mgmy005cF09f.b 26 457 26 7.1
MGMY003DG08F.B mgmy003dG08f.b 89 630 26 7.1
MGMY003DD03F.B mgmy003dD03f.b 86 611 26 7.1
MGMY003BH08F.B mgmy003bH08f.b 15 546 26 7.1
MGMY002DH09F.B mgmy002dH09f.b 15 460 26 7.1
MGMY002DE12F.B mgmy002dE12f.b 20 438 26 7.1
MGMY001AB02F.B mgmy001aB02f.b 29 598 26 7.1
MGCM002AF02F.B mgcm002aF02f.b 5 421 26 7.1
MGCM001DH06F.B mgcm001dH06f.b 21 574 26 7.1
MGCM001DA03F.B mgcm001dA03f.b 160 452 26 7.1
MGAP010CD07F.B mgap010cD07f.b 108 437 26 7.1
MGAP008CE05F.B mgap008cE05f.b 23 573 26 7.1
MGAP008CC03F.B mgap008cC03f.b 50 469 26 7.1
MGAP007CH07F.B mgap007cH07f.b 122 602 26 7.1
MGAP007CB10F.B mgap007cB10f.b 114 535 26 7.1
MGAP007BG09F.B mgap007bG09f.b 23 569 26 7.1
MGAP007BC03F.B mgap007bC03f.b 27 479 26 7.1
>MGMY005DE08F.B mgmy005dE08f.b 3 424
Length = 378
Score = 323 bits (163), Expect = 2e-89
Identities = 298/343 (86%)
Strand = Plus / Plus
Query: 83 agttgcccatcatgtcgctcgtctcgggagagaagtcgaacttccagttcattctccgtc 142
||||||||| |||||| | || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 17 agttgcccaatatgtcgttggtgtcgggcgagaagtcgaacttccagttcattctgcgtc 76
Query: 143 ttctcaacaccaatgttgacggaaagcagaaggttatgtacgccttgaccaagatcaagg 202
| |||||||| || ||||| |||||||||||| | | ||||| | |||||||||||||
Sbjct: 77 tcctcaacacaaacgttgatggaaagcagaagatcgtttacgctcttaccaagatcaagg 136
Query: 203 gtgtcggtcgccgatactctaacttggtctgcaagaaggccgatgtcgatctgaacaagc 262
||||||| ||| | ||||| ||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 137 gtgtcggccgcaggtactccaacctggtcgtcaagaaggccgatgtcgacctgaacaagc 196
Query: 263 gcgctggtgagctcacctccgaagagcttgagcgaatcgtcaccatcctccagaacccca 322
| ||||||||||||||||| || ||||| ||||| | |||||||| |||||||||||||
Sbjct: 197 gtgctggtgagctcacctctgaggagctcgagcgtgttgtcaccattctccagaacccca 256
Query: 323 cccagtacaagatccctacatggttcatcaaccgacagcgcgatatcgtcgatggcaagg 382
||||||||||||| || |||||||| | ||||| ||||||||||||||||| |||||||
Sbjct: 257 cccagtacaagattccctcatggttccttaaccgtcagcgcgatatcgtcgacggcaagg 316
Query: 383 actctcacatccttgctaacggtgtcgactccaagctccgtga 425
|||| || | |||||| ||||||||||||||||||||||||||
Sbjct: 317 actcccagacccttgccaacggtgtcgactccaagctccgtga 359
>MGMY001DH10F.B mgmy001dH10f.b 121 452
Length = 331
Score = 317 bits (160), Expect = 1e-87
Identities = 280/320 (87%)
Strand = Plus / Plus
Query: 106 tcgggagagaagtcgaacttccagttcattctccgtcttctcaacaccaatgttgacgga 165
||||| |||||||||||||||||||||||||| ||||| |||||||| || ||||| |||
Sbjct: 8 tcgggcgagaagtcgaacttccagttcattctgcgtctcctcaacacaaacgttgatgga 67
Query: 166 aagcagaaggttatgtacgccttgaccaagatcaagggtgtcggtcgccgatactctaac 225
||||||||| | | ||||| | |||||||||||||||||||| ||| | ||||| |||
Sbjct: 68 aagcagaagatcgtttacgctcttaccaagatcaagggtgtcggccgcaggtactccaac 127
Query: 226 ttggtctgcaagaaggccgatgtcgatctgaacaagcgcgctggtgagctcacctccgaa 285
||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct: 128 ctggtcgtcaagaaggccgatgtcgacctgaacaagcgtgctggtgagctcacctctgag 187
Query: 286 gagcttgagcgaatcgtcaccatcctccagaaccccacccagtacaagatccctacatgg 345
||||| ||||| | |||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 188 gagctcgagcgtgttgtcaccattctccagaaccccacccagtacaagattccctcatgg 247
Query: 346 ttcatcaaccgacagcgcgatatcgtcgatggcaaggactctcacatccttgctaacggt 405
||| | ||||| ||||||||||||||||| ||||||||||| || | |||||| ||||||
Sbjct: 248 ttccttaaccgtcagcgcgatatcgtcgacggcaaggactcccagacccttgccaacggt 307
Query: 406 gtcgactccaagctccgtga 425
||||||||||||||||||||
Sbjct: 308 gtcgactccaagctccgtga 327
>MGCM001DH02F.B mgcm001dH02f.b 19 463
Length = 373
Score = 291 bits (147), Expect = 8e-80
Identities = 282/327 (86%)
Strand = Plus / Plus
Query: 83 agttgcccatcatgtcgctcgtctcgggagagaagtcgaacttccagttcattctccgtc 142
||||||||| |||||| | || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 47 agttgcccaatatgtcgttggtgtcgggcgagaagtcgaacttccagttcattctgcgtc 106
Query: 143 ttctcaacaccaatgttgacggaaagcagaaggttatgtacgccttgaccaagatcaagg 202
| |||||||| || ||||| |||||||||||| | | ||||| | |||||||||||||
Sbjct: 107 tcctcaacacaaacgttgatggaaagcagaagatcgtttacgctcttaccaagatcaagg 166
Query: 203 gtgtcggtcgccgatactctaacttggtctgcaagaaggccgatgtcgatctgaacaagc 262
||||||| ||| | ||||| ||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 167 gtgtcggccgcaggtactccaacctggtcgtcaagaaggccgatgtcgacctgaacaagc 226
Query: 263 gcgctggtgagctcacctccgaagagcttgagcgaatcgtcaccatcctccagaacccca 322
| ||||||||||||||||| || ||||| ||||| | |||||||| |||||||||||||
Sbjct: 227 gtgctggtgagctcacctctgaggagctcgagcgtgttgtcaccattctccagaacccca 286
Query: 323 cccagtacaagatccctacatggttcatcaaccgacagcgcgatatcgtcgatggcaagg 382
||||||||||||| || |||||||| | ||||| ||||||||||||||||| |||||||
Sbjct: 287 cccagtacaagattccctcatggttccttaaccgtcagcgcgatatcgtcgacggcaagg 346
Query: 383 actctcacatccttgctaacggtgtcg 409
|||| || | |||||| ||||||||||
Sbjct: 347 actcccagacccttgccaacggtgtcg 373
>MGMY002CC02F.B mgmy002cC02f.b 0 275
Length = 275
Score = 266 bits (134), Expect = 4e-72
Identities = 239/274 (87%)
Strand = Plus / Plus
Query: 113 agaagtcgaacttccagttcattctccgtcttctcaacaccaatgttgacggaaagcaga 172
||||||||||||||||||||||||| ||||| |||||||| || ||||| ||||||||||
Sbjct: 1 agaagtcgaacttccagttcattctgcgtctcctcaacacaaacgttgatggaaagcaga 60
Query: 173 aggttatgtacgccttgaccaagatcaagggtgtcggtcgccgatactctaacttggtct 232
|| | | ||||| | |||||||||||||||||||| ||| | ||||| ||| |||||
Sbjct: 61 agatcgtttacgctcttaccaagatcaagggtgtcggccgcaggtactccaacctggtcg 120
Query: 233 gcaagaaggccgatgtcgatctgaacaagcgcgctggtgagctcacctccgaagagcttg 292
|||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 121 tcaagaaggccgatgtcgacctgaacaagcgtgctggtgagctcacctctgaggagctcg 180
Query: 293 agcgaatcgtcaccatcctccagaaccccacccagtacaagatccctacatggttcatca 352
|||| | |||||||| |||||||||||||||||||||||||| || |||||||| | |
Sbjct: 181 agcgtgttgtcaccattctccagaaccccacccagtacaagattccctcatggttcctta 240
Query: 353 accgacagcgcgatatcgtcgatggcaaggactc 386
|||| ||||||||||||||||| |||||||||||
Sbjct: 241 accgtcagcgcgatatcgtcgacggcaaggactc 274
>MGMY003AD10F.B mgmy003aD10f.b 2 260
Length = 220
Score = 143 bits (72), Expect = 4e-35
Identities = 174/208 (83%)
Strand = Plus / Plus
Query: 83 agttgcccatcatgtcgctcgtctcgggagagaagtcgaacttccagttcattctccgtc 142
||||||||| |||||||| || ||| ||||| |||||||||||||||||||| ||||
Sbjct: 9 agttgcccaatatgtcgctggtggagggcgagaattcgaacttccagttcattctgcgtc 68
Query: 143 ttctcaacaccaatgttgacggaaagcagaaggttatgtacgccttgaccaagatcaagg 202
| |||||||| || ||||| |||||||| ||| | | ||||| | |||||||||||||
Sbjct: 69 tcctcaacacaaacgttgatggaaagcataagatcgtttacgctcttaccaagatcaagg 128
Query: 203 gtgtcggtcgccgatactctaacttggtctgcaagaaggccgatgtcgatctgaacaagc 262
|||| || ||| | ||||| ||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 129 gtgtgggccgcaggtactccaacctggtcgtgaagaaggccgatgtcgacctgaacaagc 188
Query: 263 gcgctggtgagctcacctccgaagagct 290
| ||||||||||||||||| || |||||
Sbjct: 189 gtgctggtgagctcacctctgaggagct 216
>MGCM001DG01F.B mgcm001dG01f.b 0 386
Length = 333
Score = 34.2 bits (17), Expect = 0.029
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 406 gtcgactccaagctccg 422
|||||||||||||||||
Sbjct: 292 gtcgactccaagctccg 308
>MGMY003BD07F.B mgmy003bD07f.b 14 521
Length = 442
Score = 30.2 bits (15), Expect = 0.45
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 433 gagcgcctcaagaag 447
|||||||||||||||
Sbjct: 139 gagcgcctcaagaag 153
>MGCM002CE09F.B mgcm002cE09f.b 20 529
Length = 438
Score = 30.2 bits (15), Expect = 0.45
Identities = 21/23 (91%)
Strand = Plus / Minus
Query: 426 ggatcttgagcgcctcaagaaga 448
||||||||||||| ||||||||
Sbjct: 318 ggatcttgagcgcgacaagaaga 296
>MGMY006AG02F.B mgmy006aG02f.b 16 492
Length = 410
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 134 ttctccgtcttctc 147
||||||||||||||
Sbjct: 207 ttctccgtcttctc 220
>MGMY005AG07F.B mgmy005aG07f.b 183 481
Length = 298
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 134 ttctccgtcttctc 147
||||||||||||||
Sbjct: 95 ttctccgtcttctc 108
>MGMY003BD01F.B mgmy003bD01f.b 16 408
Length = 328
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 234 caagaaggccgatg 247
||||||||||||||
Sbjct: 209 caagaaggccgatg 222
>MGMY001AB07F.B mgmy001aB07f.b 2 553
Length = 515
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 603 cggctggtttcatc 616
||||||||||||||
Sbjct: 2 cggctggtttcatc 15
>MGCM002AE12F.B mgcm002aE12f.b 3 347
Length = 289
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 80 caaagttgcccatc 93
||||||||||||||
Sbjct: 178 caaagttgcccatc 165
>MGCM002AC04F.B mgcm002aC04f.b 16 508
Length = 426
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 80 caaagttgcccatc 93
||||||||||||||
Sbjct: 177 caaagttgcccatc 164
>MGCM002AC02F.B mgcm002aC02f.b 153 415
Length = 224
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 80 caaagttgcccatc 93
||||||||||||||
Sbjct: 177 caaagttgcccatc 164
>MGCM001DB11F.B mgcm001dB11f.b 22 413
Length = 324
Score = 28.2 bits (14), Expect = 1.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 80 caaagttgcccatc 93
||||||||||||||
Sbjct: 135 caaagttgcccatc 122
>MGMY006DD07F.B mgmy006dD07f.b 176 456
Length = 242
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 300 cgtcaccatcctc 312
|||||||||||||
Sbjct: 104 cgtcaccatcctc 116
>MGMY006DD03F.B mgmy006dD03f.b 18 582
Length = 510
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 435 gcgcctcaagaag 447
|||||||||||||
Sbjct: 420 gcgcctcaagaag 432
>MGMY005CF09F.B mgmy005cF09f.b 26 457
Length = 367
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 507 caagaccaccggt 519
|||||||||||||
Sbjct: 316 caagaccaccggt 328
>MGMY003DG08F.B mgmy003dG08f.b 89 630
Length = 541
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 435 gcgcctcaagaag 447
|||||||||||||
Sbjct: 88 gcgcctcaagaag 100
>MGMY003DD03F.B mgmy003dD03f.b 86 611
Length = 525
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 531 gaccgtcggtgtc 543
|||||||||||||
Sbjct: 415 gaccgtcggtgtc 427
>MGMY003BH08F.B mgmy003bH08f.b 15 546
Length = 466
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 435 gcgcctcaagaag 447
|||||||||||||
Sbjct: 96 gcgcctcaagaag 108
>MGMY002DH09F.B mgmy002dH09f.b 15 460
Length = 419
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 264 cgctggtgagctc 276
|||||||||||||
Sbjct: 407 cgctggtgagctc 395
>MGMY002DE12F.B mgmy002dE12f.b 20 438
Length = 368
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 424 gaggatcttgagc 436
|||||||||||||
Sbjct: 133 gaggatcttgagc 121
>MGMY001AB02F.B mgmy001aB02f.b 29 598
Length = 527
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 425 aggatcttgagcg 437
|||||||||||||
Sbjct: 385 aggatcttgagcg 373
>MGCM002AF02F.B mgcm002aF02f.b 5 421
Length = 364
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 350 tcaaccgacagcg 362
|||||||||||||
Sbjct: 26 tcaaccgacagcg 38
>MGCM001DH06F.B mgcm001dH06f.b 21 574
Length = 486
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 424 gaggatcttgagc 436
|||||||||||||
Sbjct: 356 gaggatcttgagc 368
>MGCM001DA03F.B mgcm001dA03f.b 160 452
Length = 254
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 599 gtgacggctggtt 611
|||||||||||||
Sbjct: 9 gtgacggctggtt 21
>MGAP010CD07F.B mgap010cD07f.b 108 437
Length = 329
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 201 gggtgtcggtcgc 213
|||||||||||||
Sbjct: 62 gggtgtcggtcgc 50
>MGAP008CE05F.B mgap008cE05f.b 23 573
Length = 506
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 134 ttctccgtcttct 146
|||||||||||||
Sbjct: 376 ttctccgtcttct 388
>MGAP008CC03F.B mgap008cC03f.b 50 469
Length = 399
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 429 tcttgagcgcctc 441
|||||||||||||
Sbjct: 383 tcttgagcgcctc 371
>MGAP007CH07F.B mgap007cH07f.b 122 602
Length = 480
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 301 gtcaccatcctcc 313
|||||||||||||
Sbjct: 320 gtcaccatcctcc 332
>MGAP007CB10F.B mgap007cB10f.b 114 535
Length = 421
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 277 acctccgaagagc 289
|||||||||||||
Sbjct: 185 acctccgaagagc 197
>MGAP007BG09F.B mgap007bG09f.b 23 569
Length = 494
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 299 tcgtcaccatcct 311
|||||||||||||
Sbjct: 253 tcgtcaccatcct 265
>MGAP007BC03F.B mgap007bC03f.b 27 479
Length = 401
Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 449 tccgcgctcaccg 461
|||||||||||||
Sbjct: 320 tccgcgctcaccg 308
Database: /phillip/Ncr/MgIFAFSall
Posted date: Feb 13, 2002 12:25 PM
Number of letters in database: 785,635
Number of sequences in database: 2061
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 347
Number of Sequences: 2061
Number of extensions: 347
Number of successful extensions: 105
Number of sequences better than 10.0: 35
length of query: 768
length of database: 785,635
effective HSP length: 14
effective length of query: 754
effective length of database: 756,781
effective search space: 570612874
effective search space used: 570612874
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 13 (26.3 bits)