TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_Mgr_IFAFSGB_nr/FgrNCT3P_
1606_E02_I04ZS5.seq
(395 letters)
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
4717 sequences; 2,543,711 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CL197CT237CN616 cl197ct237cn616 COVERAGE:0.96; CRAWID: 1; TOTAL_... 26 0.87
CL471CT543CN1212 cl471ct543cn1212 COVERAGE:0.99; CRAWID: 1; TOTA... 26 1.2
CL543CT617CN1345 cl543ct617cn1345 COVERAGE:0.99; CRAWID: 1; TOTA... 26 1.2
CL166CT203CN539 cl166ct203cn539 COVERAGE:0.98; CRAWID: 1; TOTAL_... 26 1.2
CL136CT173CN484 cl136ct173cn484 COVERAGE:0.98; CRAWID: 1; TOTAL_... 25 1.6
CL85CT118CN386 cl85ct118cn386 COVERAGE:0.97; CRAWID: 1; TOTAL_ES... 25 1.6
MGCM008AB05F.B mgcm008aB05f.b LENGTH:461bp ; DIRECTION:0 ; CLONE... 25 1.6
GI14180948 gi14180948 LENGTH:645bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 1.6
GI3392315G gi3392315g LENGTH:873bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 1.6
GI3391836G gi3391836g LENGTH:775bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 2.3
CL15CT20CN74 cl15ct20cn74 COVERAGE:1.0; CRAWID: 2; TOTAL_ESTS:1;... 25 2.3
CL545CT619CN1349 cl545ct619cn1349 COVERAGE:0.99; CRAWID: 1; TOTA... 25 2.3
CL101CT134CN412 cl101ct134cn412 COVERAGE:1.0; CRAWID: 2; TOTAL_E... 25 2.3
CL1036CT1137CN1920 cl1036ct1137cn1920 COVERAGE:0.99; CRAWID: 1; ... 25 2.3
CL300CT352CN811 cl300ct352cn811 COVERAGE:0.97; CRAWID: 2; TOTAL_... 24 2.3
CL1129CT1232CN2020 cl1129ct1232cn2020 COVERAGE:0.98; CRAWID: 1; ... 24 3.1
GI14181224 gi14181224 LENGTH:373bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 3.1
CL442CT512CN1160 cl442ct512cn1160 COVERAGE:1.0; CRAWID: 2; TOTAL... 24 3.1
MGAP007BE03F.B mgap007bE03f.b LENGTH:327bp ; DIRECTION:0 ; CLONE... 24 3.1
CL524CT598CN1316 cl524ct598cn1316 COVERAGE:0.96; CRAWID: 2; TOTA... 24 4.3
CL484CT558CN1241 cl484ct558cn1241 COVERAGE:0.97; CRAWID: 1; TOTA... 24 4.3
CL796CT885CN1659 cl796ct885cn1659 COVERAGE:0.97; CRAWID: 1; TOTA... 24 4.3
CL777CT866CN1640 cl777ct866cn1640 COVERAGE:0.99; CRAWID: 1; TOTA... 24 4.3
CL10CT14CN33 cl10ct14cn33 COVERAGE:0.96; CRAWID: 2; TOTAL_ESTS:1... 24 4.3
MGNS013AA03F.B mgns013aA03f.b LENGTH:335bp ; DIRECTION:0 ; CLONE... 22 5.8
GI3391842G gi3391842g LENGTH:776bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 5.9
CL265CT311CN740 cl265ct311cn740 COVERAGE:1.0; CRAWID: 1; TOTAL_E... 24 5.9
MGNS008BE04F.B mgns008bE04f.b LENGTH:388bp ; DIRECTION:0 ; CLONE... 24 5.9
MGCS004AE03F.B mgcs004aE03f.b LENGTH:334bp ; DIRECTION:0 ; CLONE... 24 5.9
MGCM004AE02F.B mgcm004aE02f.b LENGTH:271bp ; DIRECTION:0 ; CLONE... 24 5.9
MGNS007AD09F.B mgns007aD09f.b LENGTH:471bp ; DIRECTION:0 ; CLONE... 24 5.9
MGMY002CH07F.B mgmy002cH07f.b LENGTH:448bp ; DIRECTION:0 ; CLONE... 24 5.9
GI14181418 gi14181418 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 5.9
GI14181079 gi14181079 LENGTH:643bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 5.9
CL1266CT1369CN2159 cl1266ct1369cn2159 COVERAGE:1.0; CRAWID: 1; T... 24 5.9
MGCM008AC06F.B mgcm008aC06f.b LENGTH:351bp ; DIRECTION:0 ; CLONE... 21 8.0
CL365CT428CN948 cl365ct428cn948 COVERAGE:1.0; CRAWID: 1; TOTAL_E... 23 8.1
CL458CT529CN1191 cl458ct529cn1191 COVERAGE:0.99; CRAWID: 1; TOTA... 23 8.1
MGCS011DG05F.B mgcs011dG05f.b LENGTH:504bp ; DIRECTION:0 ; CLONE... 23 8.1
MGNS013BB11F.B mgns013bB11f.b LENGTH:360bp ; DIRECTION:0 ; CLONE... 23 8.1
MGCM006CF01F.B mgcm006cF01f.b LENGTH:217bp ; DIRECTION:0 ; CLONE... 23 8.1
CL529CT603CN1324 cl529ct603cn1324 COVERAGE:0.99; CRAWID: 1; TOTA... 23 8.1
MGNS010AD12F.B mgns010aD12f.b LENGTH:220bp ; DIRECTION:0 ; CLONE... 23 8.1
GI14181134 gi14181134 LENGTH:688bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.1
GI14180419 gi14180419 LENGTH:727bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.1
CL99CT132CN410 cl99ct132cn410 COVERAGE:0.99; CRAWID: 1; TOTAL_ES... 23 8.1
MGNS011BF03F.B mgns011bF03f.b LENGTH:374bp ; DIRECTION:0 ; CLONE... 21 8.5
>CL197CT237CN616 cl197ct237cn616 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181182,gi339153
Length = 971
Score = 26.3 bits (51), Expect = 0.87
Identities = 9/22 (40%), Positives = 13/22 (58%)
Frame = +2 / -3
Query: 326 DPNSSR*IVFPILVWNSVFILT 391
DPN +PI++WN V + T
Sbjct: 852 DPNYISKSKYPIIIWNKVRVFT 787
>CL471CT543CN1212 cl471ct543cn1212 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:5; ESTS:gi3392349g,mgcm012
Length = 885
Score = 25.8 bits (50), Expect = 1.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1 / +3
Query: 98 WNLSWVRPWFRP 63
WN WV PW P
Sbjct: 699 WNYKWVIPWGHP 734
>CL543CT617CN1345 cl543ct617cn1345 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:13; ESTS:gi3391602g,mgcs00
Length = 1126
Score = 25.8 bits (50), Expect = 1.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1 / +1
Query: 200 PLIPPWTSSLTPWTHP 153
P+ PP+ SL PW+ P
Sbjct: 238 PVAPPYQPSLPPWS*P 285
>CL166CT203CN539 cl166ct203cn539 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181274,gi141810
Length = 473
Score = 25.8 bits (50), Expect = 1.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2 / -1
Query: 227 LAKFGRLPMVWTW 265
LA RLPM WTW
Sbjct: 452 LAV*ARLPMTWTW 414
>CL136CT173CN484 cl136ct173cn484 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:36; ESTS:gi14180890,gi14180
Length = 1169
Score = 25.3 bits (49), Expect = 1.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1 / -3
Query: 98 WNLSWVRPWFRP*GCP*VPPLV 33
W WV W R G P P LV
Sbjct: 765 WGTPWVAVWVRVVGEPGAPDLV 700
>CL85CT118CN386 cl85ct118cn386 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181428,gi3391468
Length = 930
Score = 25.3 bits (49), Expect = 1.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -2
Query: 92 LSWVRPWFRP 63
L WVRPW RP
Sbjct: 473 LLWVRPWRRP 444
>MGCM008AB05F.B mgcm008aB05f.b LENGTH:461bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 461
Score = 25.3 bits (49), Expect = 1.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1 / +3
Query: 44 PPLVRPWVDPWA 9
PP RPW PW+
Sbjct: 141 PPPARPWWPPWS 176
>GI14180948 gi14180948 LENGTH:645bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 645
Score = 25.3 bits (49), Expect = 1.6
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -1 / +3
Query: 278 PLCEPKSIPLVVAQTSLVHTPNV*DEPLIPPWT 180
P C+P+ L++ S + P + PL+ P++
Sbjct: 531 PPCDPRKFELIIDNDSGTYPP*QSNPPLLAPFS 629
>GI3392315G gi3392315g LENGTH:873bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 873
Score = 25.3 bits (49), Expect = 1.6
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = -2 / -3
Query: 277 HCVNPSPYHW*SP 239
H +NPSP HW P
Sbjct: 550 HPLNPSPLHWGLP 512
>GI3391836G gi3391836g LENGTH:775bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 775
Score = 24.9 bits (48), Expect = 2.3
Identities = 14/43 (32%), Positives = 22/43 (50%)
Frame = -1 / -2
Query: 338 SCSGPTVALQK*TSILIVPHPLCEPKSIPLVVAQTSLVHTPNV 210
S GP L++ IL VP P+ +P+ + V + + V NV
Sbjct: 516 SIPGPVGRLKRHGXILKVPIPVEDPRXVLXDVLELAXVVRGNV 388
>CL15CT20CN74 cl15ct20cn74 COVERAGE:1.0; CRAWID: 2; TOTAL_ESTS:1;
ESTS:gi3392217g; LENGTH:846b
Length = 846
Score = 24.9 bits (48), Expect = 2.3
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +3 / +3
Query: 237 LGDYQWYGLGFTQWMWDN 290
+G + W+ F W WD+
Sbjct: 312 VGKWSWFFSKFAPWAWDS 365
>CL545CT619CN1349 cl545ct619cn1349 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:9; ESTS:gi3391908g,mgmy003
Length = 783
Score = 24.9 bits (48), Expect = 2.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1 / +1
Query: 53 P*VPPLVRPWVDPWA 9
P PPL RPW P A
Sbjct: 175 PREPPLRRPWTSPTA 219
>CL101CT134CN412 cl101ct134cn412 COVERAGE:1.0; CRAWID: 2;
TOTAL_ESTS:1; ESTS:gi3392005g; LENGTH:7
Length = 766
Score = 24.9 bits (48), Expect = 2.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1 / -1
Query: 220 VWTSEVWATTNGMDLGSHNG 279
+W + +WA N LG+ +G
Sbjct: 595 IWQTRIWAAQNWKPLGAISG 536
>CL1036CT1137CN1920 cl1036ct1137cn1920 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm002cD09f.b,m
Length = 469
Score = 24.9 bits (48), Expect = 2.3
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = -3 / -1
Query: 360 IGNTIYLELFGSYSSPSK 307
+GN + L L GS+S PSK
Sbjct: 373 VGNCLELGLQGSFSFPSK 320
>CL300CT352CN811 cl300ct352cn811 COVERAGE:0.97; CRAWID: 2;
TOTAL_ESTS:10; ESTS:gi14180174,mgmy001
Length = 958
Score = 24.4 bits (47), Expect(2) = 2.3
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / +3
Query: 89 SWVRPWFRP 63
+W RPWF P
Sbjct: 222 TWARPWFAP 248
Score = 18.5 bits (34), Expect(2) = 2.3
Identities = 3/5 (60%), Positives = 3/5 (60%)
Frame = -1 / +1
Query: 29 PWVDP 15
PW P
Sbjct: 247 PWYTP 261
>CL1129CT1232CN2020 cl1129ct1232cn2020 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:6; ESTS:mgcm005aA11f.b,m
Length = 402
Score = 24.4 bits (47), Expect = 3.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2 / +3
Query: 286 SHIHCVNPSPYHW*SPK 236
SH+ C P P W +PK
Sbjct: 30 SHLPCHPPHPTRWPTPK 80
>GI14181224 gi14181224 LENGTH:373bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 373
Score = 24.4 bits (47), Expect = 3.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2 / -2
Query: 329 PNSSR*IVFPILVWNSVFILTF 394
P + + + PIL+W+S F+ F
Sbjct: 108 PRTRKAALEPILIWHSFFLFFF 43
>CL442CT512CN1160 cl442ct512cn1160 COVERAGE:1.0; CRAWID: 2;
TOTAL_ESTS:1; ESTS:gi14180293; LENGTH:
Length = 774
Score = 24.4 bits (47), Expect = 3.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / -2
Query: 98 WNLSWVRPWF 69
WNL W RP F
Sbjct: 731 WNLQWTRPRF 702
>MGAP007BE03F.B mgap007bE03f.b LENGTH:327bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 327
Score = 24.4 bits (47), Expect = 3.1
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2 / -2
Query: 5 HEPRDQPKDEPKEELKDNLKDETKDEPKTDSK 100
H+ D ++P DN+ DEP D +
Sbjct: 308 HDAEDTEGEDPDTNDSDNVSHLVADEPTPDGE 213
>CL524CT598CN1316 cl524ct598cn1316 COVERAGE:0.96; CRAWID: 2;
TOTAL_ESTS:3; ESTS:gi3392014g,mgmy002
Length = 1129
Score = 24.0 bits (46), Expect = 4.3
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1 / -1
Query: 86 WVRPWFRP 63
W RPW+RP
Sbjct: 151 WGRPWYRP 128
>CL484CT558CN1241 cl484ct558cn1241 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:5; ESTS:mgmy001aA08f.b,mgc
Length = 1267
Score = 24.0 bits (46), Expect = 4.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 47 VPPLVRPWVDPWARA 3
+PPL RP + W RA
Sbjct: 395 IPPLSRPRTEGWNRA 351
>CL796CT885CN1659 cl796ct885cn1659 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:6; ESTS:mgmy002aB06f.b,mgm
Length = 839
Score = 24.0 bits (46), Expect = 4.3
Identities = 7/21 (33%), Positives = 12/21 (56%)
Frame = +3 / +3
Query: 255 YGLGFTQWMWDN*YACLLLKG 317
+ LG +W W + +C+L G
Sbjct: 714 FPLGLKEWQWVHQRSCMLCDG 776
>CL777CT866CN1640 cl777ct866cn1640 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy001dC06f.b,mgm
Length = 482
Score = 24.0 bits (46), Expect = 4.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1 / -3
Query: 86 WVRPWFRP*GCP*VPPLVRPWVD 18
W R R * +PP +PW+D
Sbjct: 255 WPRLMSRR*PVKRLPPSTKPWID 187
>CL10CT14CN33 cl10ct14cn33 COVERAGE:0.96; CRAWID: 2; TOTAL_ESTS:14;
ESTS:gi14181485,gi14181483
Length = 1983
Score = 24.0 bits (46), Expect = 4.3
Identities = 9/22 (40%), Positives = 11/22 (49%)
Frame = -1 / +2
Query: 218 PNV*DEPLIPPWTSSLTPWTHP 153
P+ PL+PP L PW P
Sbjct: 1004 PSPWPSPLLPPLPLPLPPWA*P 1069
>MGNS013AA03F.B mgns013aA03f.b LENGTH:335bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 335
Score = 21.7 bits (41), Expect(2) = 5.8
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = -1 / +1
Query: 74 WFRP*GC 54
W RP GC
Sbjct: 208 WLRPGGC 228
Score = 19.8 bits (37), Expect(2) = 5.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1 / +3
Query: 344 TLSCSGPTVA 315
T+SC P VA
Sbjct: 66 TMSCCAPLVA 95
>GI3391842G gi3391842g LENGTH:776bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 776
Score = 23.5 bits (45), Expect = 5.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / -2
Query: 217 GVWTSEVWATTNGM 258
GVWTS W T++ +
Sbjct: 247 GVWTSASWPTSDSV 206
>CL265CT311CN740 cl265ct311cn740 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:3; ESTS:gi14180992,gi3391777
Length = 1398
Score = 23.5 bits (45), Expect = 5.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2 / +2
Query: 17 DQPKDEPKEELKDNLKDETKDEPKTDSK 100
+QPK E K E DEPK K
Sbjct: 554 EQPKKEAKPAAAPAAAAEEDDEPKPQPK 637
>MGNS008BE04F.B mgns008bE04f.b LENGTH:388bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 388
Score = 23.5 bits (45), Expect = 5.9
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2 / -3
Query: 257 WTWVHTMDVGQLVCLFTFEGLL*DPNSSR*IVFPILVWNSVF 382
W V +D+G ++ F P + R + + W+SVF
Sbjct: 239 WRGVVKLDIGWVLVWSAFNCSNVSPLTGRIVTMLVREWSSVF 114
>MGCS004AE03F.B mgcs004aE03f.b LENGTH:334bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 334
Score = 23.5 bits (45), Expect = 5.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2 / -2
Query: 245 LPMVWTWVHTMDVGQLV 295
L VW + H VG+LV
Sbjct: 81 LSRVWPY*HLYVVGRLV 31
>MGCM004AE02F.B mgcm004aE02f.b LENGTH:271bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 271
Score = 23.5 bits (45), Expect = 5.9
Identities = 9/22 (40%), Positives = 11/22 (49%)
Frame = -1 / -2
Query: 215 NV*DEPLIPPWTSSLTPWTHPL 150
N P PP TS++ PW L
Sbjct: 99 NAKPHPRAPPVTSAVRPWRENL 34
>MGNS007AD09F.B mgns007aD09f.b LENGTH:471bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 471
Score = 23.5 bits (45), Expect = 5.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2 / -2
Query: 248 PMVWTWVHT 274
P VW WVHT
Sbjct: 311 P*VWKWVHT 285
>MGMY002CH07F.B mgmy002cH07f.b LENGTH:448bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 448
Score = 23.5 bits (45), Expect = 5.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1 / -1
Query: 194 IPPWTSSLTP 165
IP W+SS P
Sbjct: 142 IPTWSSSQPP 113
>GI14181418 gi14181418 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 671
Score = 23.5 bits (45), Expect = 5.9
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1 / +1
Query: 296 ILIVPHPLCEPKSIPLVVAQTSLVHTPNV*DEPLIPPWTSSLTPWTHP 153
IL H C P P +L P P PP+ TP T P
Sbjct: 502 ILNTSHGACAPHPEPGTHHPAALTAPPLRVPYPPPPPYPRPFTPTTLP 645
>GI14181079 gi14181079 LENGTH:643bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 643
Score = 23.5 bits (45), Expect = 5.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1 / +2
Query: 182 TSSLTPWTHP 153
T SL+ WTHP
Sbjct: 368 TLSLSHWTHP 397
>CL1266CT1369CN2159 cl1266ct1369cn2159 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns001aE04f.b,mg
Length = 522
Score = 23.5 bits (45), Expect = 5.9
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -1 / -2
Query: 98 WNLSWVRPW 72
W LSW PW
Sbjct: 332 WYLSWFTPW 306
>MGCM008AC06F.B mgcm008aC06f.b LENGTH:351bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 351
Score = 20.8 bits (39), Expect(2) = 8.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -3 / +2
Query: 381 NTLFQTSIGNTIYLELFGSYSSPS 310
N F++ I +T +FGS ++P+
Sbjct: 167 NRQFKSPIMSTPDAGIFGSSTAPA 238
Score = 20.3 bits (38), Expect(2) = 8.0
Identities = 5/13 (38%), Positives = 7/13 (53%)
Frame = -1 / +3
Query: 89 SWVRPWFRP*GCP 51
+W +PW R P
Sbjct: 291 AWAKPWRRRSSAP 329
>CL365CT428CN948 cl365ct428cn948 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:gi14180661; LENGTH:7
Length = 781
Score = 23.1 bits (44), Expect = 8.1
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2 / -2
Query: 17 DQPKDEPKEELKD 55
D+P +EP++EL++
Sbjct: 513 DEPPEEPRDELEE 475
>CL458CT529CN1191 cl458ct529cn1191 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3392390g,mgns010
Length = 866
Score = 23.1 bits (44), Expect = 8.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / +2
Query: 258 HTIGSRPNFASPYSKC 211
HTI SRP F++ + C
Sbjct: 302 HTIASRPCFSTGAASC 349
>MGCS011DG05F.B mgcs011dG05f.b LENGTH:504bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 504
Score = 23.1 bits (44), Expect = 8.1
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -1 / -1
Query: 86 WVRPWFRP 63
W RPW RP
Sbjct: 402 WPRPWRRP 379
>MGNS013BB11F.B mgns013bB11f.b LENGTH:360bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 360
Score = 23.1 bits (44), Expect = 8.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -1 / +1
Query: 98 WNLSWVRPWFRP 63
+ ++W RPW RP
Sbjct: 37 FRIAWRRPWRRP 72
>MGCM006CF01F.B mgcm006cF01f.b LENGTH:217bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 217
Score = 23.1 bits (44), Expect = 8.1
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1 / +1
Query: 188 PWTSSLTPWT 159
PW S +PWT
Sbjct: 172 PWASGSSPWT 201
>CL529CT603CN1324 cl529ct603cn1324 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi3391991g,mgcm002
Length = 1020
Score = 23.1 bits (44), Expect = 8.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 293 LIVPHPLCEP 264
L+VP PLC+P
Sbjct: 105 LVVPLPLCQP 76
>MGNS010AD12F.B mgns010aD12f.b LENGTH:220bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 220
Score = 23.1 bits (44), Expect = 8.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2 / +3
Query: 23 PKDEPKEELKDNLKDETKDEPKT 91
P D+ +E K N K + D+P++
Sbjct: 54 PSDQIQEGYKRNRKGKAADQPRS 122
>GI14181134 gi14181134 LENGTH:688bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 688
Score = 23.1 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2 / +3
Query: 274 CVNPSPYHW*SP 239
C P P HW* P
Sbjct: 633 CHRPGPCHW*CP 668
>GI14180419 gi14180419 LENGTH:727bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 727
Score = 23.1 bits (44), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 191 PPWTSSLTPWTHPL 150
P TSSLT WT+ L
Sbjct: 232 PAVTSSLTTWTYNL 273
>CL99CT132CN410 cl99ct132cn410 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181404,mgcm005bE
Length = 956
Score = 23.1 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 10/16 (61%)
Frame = -1 / +3
Query: 200 PLIPPWTSSLTPWTHP 153
PLIP W + + P+ P
Sbjct: 852 PLIPYWLAQIAPYWGP 899
>MGNS011BF03F.B mgns011bF03f.b LENGTH:374bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 374
Score = 20.8 bits (39), Expect(2) = 8.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -1 / +2
Query: 278 PLCEPKSIPLVVAQTSLVHT 219
P PKS+ V+ S+ H+
Sbjct: 242 PSTTPKSLRRVLISFSISHS 301
Score = 20.3 bits (38), Expect(2) = 8.5
Identities = 11/31 (35%), Positives = 14/31 (44%)
Frame = -1 / +1
Query: 344 TLSCSGPTVALQK*TSILIVPHPLCEPKSIP 252
T+ GP VA+ K I PH P + P
Sbjct: 91 TIGFLGPNVAILKHQIINRCPHCPTHPNA*P 183
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
Posted date: Mar 22, 2002 5:31 PM
Number of letters in database: 2,543,711
Number of sequences in database: 4717
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2101602
Number of Sequences: 4717
Number of extensions: 28204
Number of successful extensions: 1231
Number of sequences better than 10.0: 63
length of query: 131
length of database: 847,903
effective HSP length: 37
effective length of query: 94
effective length of database: 673,374
effective search space: 63297156
effective search space used: 63297156
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 43 (22.6 bits)