TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_Mgr_IFAFSGB_nr/FgrNCT3P_
1606_F11_K22ZS5.seq
(457 letters)
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
4717 sequences; 2,543,711 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGMY002CC08F.B mgmy002cC08f.b LENGTH:433bp ; DIRECTION:0 ; CLONE... 27 0.037
MGCM005AC02F.B mgcm005aC02f.b LENGTH:388bp ; DIRECTION:0 ; CLONE... 27 0.48
MGNS006AG10F.B mgns006aG10f.b LENGTH:257bp ; DIRECTION:0 ; CLONE... 27 0.75
GI3391524G gi3391524g LENGTH:959bp ; DIRECTION:0 ; CLONE: n/a ; ... 27 0.75
CL156CT193CN521 cl156ct193cn521 COVERAGE:0.99; CRAWID: 1; TOTAL_... 26 1.0
MGCM012CD12F.B mgcm012cD12f.b LENGTH:389bp ; DIRECTION:0 ; CLONE... 26 1.0
GI14180438 gi14180438 LENGTH:703bp ; DIRECTION:0 ; CLONE: n/a ; ... 26 1.0
MGNS012AF09F.B mgns012aF09f.b LENGTH:429bp ; DIRECTION:0 ; CLONE... 26 1.4
MGCM008BE03F.B mgcm008bE03f.b LENGTH:433bp ; DIRECTION:0 ; CLONE... 26 1.4
MGNS001CE02F.B mgns001cE02f.b LENGTH:294bp ; DIRECTION:0 ; CLONE... 26 1.4
GI14180755 gi14180755 LENGTH:707bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 2.7
GI3391768G gi3391768g LENGTH:792bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 2.7
CL194CT234CN611 cl194ct234cn611 COVERAGE:0.98; CRAWID: 1; TOTAL_... 25 2.7
GI3391764G gi3391764g LENGTH:765bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 2.7
MGNS002BB06F.B mgns002bB06f.b LENGTH:355bp ; DIRECTION:0 ; CLONE... 25 2.7
CL704CT787CN1557 cl704ct787cn1557 COVERAGE:0.98; CRAWID: 1; TOTA... 25 2.7
CL704CT788CN1558 cl704ct788cn1558 COVERAGE:0.99; CRAWID: 1; TOTA... 25 2.7
MGCS006AA05F.B mgcs006aA05f.b LENGTH:573bp ; DIRECTION:0 ; CLONE... 25 2.7
CL1037CT1138CN1921 cl1037ct1138cn1921 COVERAGE:0.99; CRAWID: 1; ... 25 2.7
CL1390CT1493CN2289 cl1390ct1493cn2289 COVERAGE:0.99; CRAWID: 1; ... 24 3.7
GI14181219 gi14181219 LENGTH:980bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 3.7
CL118CT153CN454 cl118ct153cn454 COVERAGE:1.0; CRAWID: 1; TOTAL_E... 24 3.7
CL1465CT1569CN2365 cl1465ct1569cn2365 COVERAGE:1.0; CRAWID: 1; T... 24 3.7
CL1144CT1247CN2036 cl1144ct1247cn2036 COVERAGE:0.99; CRAWID: 1; ... 24 3.7
MGAP010CG05F.B mgap010cG05f.b LENGTH:437bp ; DIRECTION:0 ; CLONE... 24 3.7
GI14180886 gi14180886 LENGTH:642bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 3.7
MGMY002BA04F.B mgmy002bA04f.b LENGTH:271bp ; DIRECTION:0 ; CLONE... 24 3.7
CL289CT341CN796 cl289ct341cn796 COVERAGE:0.99; CRAWID: 1; TOTAL_... 24 5.0
CL655CT737CN1504 cl655ct737cn1504 COVERAGE:0.99; CRAWID: 1; TOTA... 24 5.0
MGNS013DH02F.B mgns013dH02f.b LENGTH:303bp ; DIRECTION:0 ; CLONE... 24 5.0
MGNS009CE08F.B mgns009cE08f.b LENGTH:424bp ; DIRECTION:0 ; CLONE... 24 5.0
CL1205CT1308CN2098 cl1205ct1308cn2098 COVERAGE:1.0; CRAWID: 1; T... 24 5.0
MGCM005BD11F.B mgcm005bD11f.b LENGTH:451bp ; DIRECTION:0 ; CLONE... 24 5.0
CL1278CT1381CN2172 cl1278ct1381cn2172 COVERAGE:0.99; CRAWID: 1; ... 24 5.0
CL631CT709CN1466 cl631ct709cn1466 COVERAGE:0.99; CRAWID: 2; TOTA... 24 5.0
MGCM006DA09F.B mgcm006dA09f.b LENGTH:334bp ; DIRECTION:0 ; CLONE... 24 5.0
CL497CT571CN1267 cl497ct571cn1267 COVERAGE:1.0; CRAWID: 2; TOTAL... 24 6.9
GI3047302G gi3047302g LENGTH:647bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.9
GI3391498G gi3391498g LENGTH:883bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.9
CL482CT555CN1237 cl482ct555cn1237 COVERAGE:0.99; CRAWID: 1; TOTA... 24 6.9
CL486CT560CN1246 cl486ct560cn1246 COVERAGE:0.99; CRAWID: 1; TOTA... 24 6.9
CL648CT729CN1495 cl648ct729cn1495 COVERAGE:0.98; CRAWID: 1; TOTA... 24 6.9
MGNS013BA01F.B mgns013bA01f.b LENGTH:425bp ; DIRECTION:0 ; CLONE... 24 6.9
CL1360CT1463CN2255 cl1360ct1463cn2255 COVERAGE:0.99; CRAWID: 1; ... 24 6.9
MGCS002DF08F.B mgcs002dF08f.b LENGTH:235bp ; DIRECTION:0 ; CLONE... 24 6.9
GI14181199 gi14181199 LENGTH:661bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.9
MGCS002DB04F.B mgcs002dB04f.b LENGTH:548bp ; DIRECTION:0 ; CLONE... 24 6.9
MGCM006AB09F.B mgcm006aB09f.b LENGTH:386bp ; DIRECTION:0 ; CLONE... 24 6.9
CL827CT921CN1695 cl827ct921cn1695 COVERAGE:0.98; CRAWID: 1; TOTA... 24 6.9
CL460CT531CN1195 cl460ct531cn1195 COVERAGE:0.99; CRAWID: 1; TOTA... 24 6.9
CL260CT306CN729 cl260ct306cn729 COVERAGE:0.99; CRAWID: 1; TOTAL_... 24 6.9
MGNS008BH03F.B mgns008bH03f.b LENGTH:279bp ; DIRECTION:0 ; CLONE... 24 6.9
MGNS001AF06F.B mgns001aF06f.b LENGTH:368bp ; DIRECTION:0 ; CLONE... 24 6.9
CL410CT476CN1072 cl410ct476cn1072 COVERAGE:0.96; CRAWID: 1; TOTA... 24 6.9
MGMY006DC01F.B mgmy006dC01f.b LENGTH:380bp ; DIRECTION:0 ; CLONE... 24 6.9
CL941CT1040CN1820 cl941ct1040cn1820 COVERAGE:1.0; CRAWID: 1; TOT... 24 6.9
CL128CT164CN470 cl128ct164cn470 COVERAGE:0.99; CRAWID: 1; TOTAL_... 24 6.9
MGNS011AA08F.B mgns011aA08f.b LENGTH:391bp ; DIRECTION:0 ; CLONE... 24 6.9
GI3392300G gi3392300g LENGTH:872bp ; DIRECTION:0 ; CLONE: n/a ; ... 21 8.6
GI14181418 gi14181418 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 9.5
CL46CT69CN253 cl46ct69cn253 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS... 23 9.5
CL831CT926CN1701 cl831ct926cn1701 COVERAGE:0.98; CRAWID: 1; TOTA... 23 9.5
CL402CT468CN1044 cl402ct468cn1044 COVERAGE:0.98; CRAWID: 2; TOTA... 23 9.5
GI3391650G gi3391650g LENGTH:831bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 9.5
GI14181253 gi14181253 LENGTH:660bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 9.5
CL1063CT1164CN1950 cl1063ct1164cn1950 COVERAGE:0.99; CRAWID: 1; ... 23 9.5
GI2537292G gi2537292g LENGTH:547bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 9.5
CL1376CT1479CN2274 cl1376ct1479cn2274 COVERAGE:0.99; CRAWID: 1; ... 23 9.5
MGMY002CH07F.B mgmy002cH07f.b LENGTH:448bp ; DIRECTION:0 ; CLONE... 23 9.5
MGCM012BA03F.B mgcm012bA03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE... 23 9.5
MGCM006CG12F.B mgcm006cG12f.b LENGTH:483bp ; DIRECTION:0 ; CLONE... 23 9.5
MGCM006AC01F.B mgcm006aC01f.b LENGTH:411bp ; DIRECTION:0 ; CLONE... 23 9.5
MGCM002AG01F.B mgcm002aG01f.b LENGTH:384bp ; DIRECTION:0 ; CLONE... 23 9.5
GI14181379 gi14181379 LENGTH:632bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 9.5
MGCS001DB05F.B mgcs001dB05f.b LENGTH:308bp ; DIRECTION:0 ; CLONE... 23 9.5
GI3391785G gi3391785g LENGTH:787bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 9.5
MGCM008DG05F.B mgcm008dG05f.b LENGTH:478bp ; DIRECTION:0 ; CLONE... 23 9.5
MGCM002AE01F.B mgcm002aE01f.b LENGTH:497bp ; DIRECTION:0 ; CLONE... 23 9.5
CL1459CT1563CN2359 cl1459ct1563cn2359 COVERAGE:0.98; CRAWID: 1; ... 23 9.5
CL1371CT1474CN2268 cl1371ct1474cn2268 COVERAGE:0.98; CRAWID: 1; ... 23 9.5
>MGMY002CC08F.B mgmy002cC08f.b LENGTH:433bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 433
Score = 27.2 bits (53), Expect(2) = 0.037
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3 / +1
Query: 225 KTPKSLRMI*SLRAEYATPITVRPCCHSRNFFL 323
+TP+SLRM L P+ + CC R+ L
Sbjct: 178 RTPRSLRMASDLSQAGTLPLRQQACCIYRSLSL 276
Score = 23.1 bits (44), Expect(2) = 0.037
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2 / +2
Query: 104 ENCQPHQSSHCKHF 145
E CQ + HCKH+
Sbjct: 95 ERCQVCRWRHCKHY 136
>MGCM005AC02F.B mgcm005aC02f.b LENGTH:388bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 388
Score = 26.7 bits (52), Expect(2) = 0.48
Identities = 9/24 (37%), Positives = 14/24 (57%)
Frame = +3 / -3
Query: 168 C*VMRYVAWHRSSQ*IWLKKTPKS 239
C*++R+ WH S Q W + +S
Sbjct: 176 C*ILRWRGWHASCQRRWSRNRSQS 105
Score = 19.4 bits (36), Expect(2) = 0.48
Identities = 5/16 (31%), Positives = 6/16 (37%)
Frame = +2 / -3
Query: 110 CQPHQSSHCKHFAEVD 157
C P S C+ D
Sbjct: 266 CYPKASQRCQRNPNQD 219
>MGNS006AG10F.B mgns006aG10f.b LENGTH:257bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 257
Score = 26.7 bits (52), Expect = 0.75
Identities = 15/60 (25%), Positives = 23/60 (38%)
Frame = -1 / -2
Query: 364 FIFGETQAISLSGLKKKFLEWQHGRTVIGVAYSARNDYIILRDFGVFFNHIYWLDLCQAT 185
F F QA+ L L H + + + +A N F + NH +WL + T
Sbjct: 253 FFFFFFQAVRTIFLSSLMLRGYHKQKYLTESDTAANRLTSTPTFSMLSNHTFWLSSARIT 74
>GI3391524G gi3391524g LENGTH:959bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 959
Score = 26.7 bits (52), Expect = 0.75
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 212 LLARPVPGNISHHSTVQGNQP 150
+L +PG ++HH +V G+ P
Sbjct: 262 VLGDDIPGRMAHHLSVPGSSP 200
>CL156CT193CN521 cl156ct193cn521 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:7; ESTS:gi14181298,mgap007c
Length = 1241
Score = 26.3 bits (51), Expect = 1.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / -1
Query: 80 WRTSSALVRPGRENR 36
WRT + RPGRE+R
Sbjct: 374 WRTPACARRPGRESR 330
>MGCM012CD12F.B mgcm012cD12f.b LENGTH:389bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 389
Score = 26.3 bits (51), Expect = 1.0
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = -2 / -2
Query: 69 FSPGAAWPRESPRLR 25
FS GAAW R +PR R
Sbjct: 148 FSAGAAWTRVAPRER 104
>GI14180438 gi14180438 LENGTH:703bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 703
Score = 26.3 bits (51), Expect = 1.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 86 TVWRTSSALVRPG 48
+ W+TSSA+ RPG
Sbjct: 392 SAWKTSSAIARPG 430
>MGNS012AF09F.B mgns012aF09f.b LENGTH:429bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 429
Score = 25.8 bits (50), Expect = 1.4
Identities = 11/26 (42%), Positives = 13/26 (49%)
Frame = -2 / -3
Query: 207 GSTCARQHISSLNSPRQSTSAKCLQC 130
G TC + S SP S+ A CL C
Sbjct: 184 GRTCRTKWSSRRWSPSSSSMATCLDC 107
>MGCM008BE03F.B mgcm008bE03f.b LENGTH:433bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 433
Score = 25.8 bits (50), Expect = 1.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3 / -1
Query: 18 NGNGALAILAARPHQG*RCAPYCNS 92
+G G ++IL PH G + YC S
Sbjct: 145 SGGGGVSILRKSPHTGSFLSSYCPS 71
>MGNS001CE02F.B mgns001cE02f.b LENGTH:294bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 294
Score = 25.8 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 14/24 (57%)
Frame = +1 / -2
Query: 76 RHTVTRSSDRELPTPSKLAL*TLR 147
RH +TR+ D + P P + L LR
Sbjct: 149 RHAMTRAGDVQAPVPGRAHLGRLR 78
>GI14180755 gi14180755 LENGTH:707bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 707
Score = 24.9 bits (48), Expect = 2.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2 / +1
Query: 63 PGAAWPRESPRLRC 22
PG AW R +P + C
Sbjct: 598 PGCAWERAAPHIPC 639
>GI3391768G gi3391768g LENGTH:792bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 792
Score = 24.9 bits (48), Expect = 2.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / -2
Query: 34 WRFSRPGRTRAED 72
WRF RPG R D
Sbjct: 251 WRFGRPGLPRGRD 213
>CL194CT234CN611 cl194ct234cn611 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181191,gi339156
Length = 1050
Score = 24.9 bits (48), Expect = 2.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3 / -2
Query: 192 WHRSSQ*IWLKKTPKSLRM 248
WHR S W ++ P+S M
Sbjct: 491 WHRRSPWSWRRRAPRSSSM 435
Score = 23.1 bits (44), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (55%)
Frame = +1 / -3
Query: 37 RFSRPGRTRAEDVRHTVTRSSDR 105
R +RPGRT R TR+S R
Sbjct: 379 RRTRPGRTTDPSPRRRRTRASAR 311
>GI3391764G gi3391764g LENGTH:765bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 765
Score = 24.9 bits (48), Expect = 2.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3 / +1
Query: 116 VGSSRSDERVTVWRTSSALVRPG 48
+G D R+T WRTS + G
Sbjct: 616 IGHQEIDVRLTAWRTSCLDINTG 684
>MGNS002BB06F.B mgns002bB06f.b LENGTH:355bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 355
Score = 24.9 bits (48), Expect = 2.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1 / +3
Query: 439 NLPNPSDLIKTYEFAVQTEVP 377
++P P DL+K V T+VP
Sbjct: 177 DVPEPVDLMKVKRDYVATKVP 239
>CL704CT787CN1557 cl704ct787cn1557 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy003aB10f.b,mgm
Length = 452
Score = 24.9 bits (48), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / -2
Query: 291 RPCCHSRNFFLRPLR 335
R CC RNF +R LR
Sbjct: 436 RSCCFLRNFLVRYLR 392
>CL704CT788CN1558 cl704ct788cn1558 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgap008dG11f.b,mgm
Length = 635
Score = 24.9 bits (48), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / -3
Query: 291 RPCCHSRNFFLRPLR 335
R CC RNF +R LR
Sbjct: 375 RSCCFLRNFLVRYLR 331
>MGCS006AA05F.B mgcs006aA05f.b LENGTH:573bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 573
Score = 24.9 bits (48), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 88 TRSSDRELPTPSKLAL*TL 144
T S R+LPTPSK L TL
Sbjct: 103 TPESCRKLPTPSKPVLFTL 159
>CL1037CT1138CN1921 cl1037ct1138cn1921 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm002cD11f.b,m
Length = 462
Score = 24.9 bits (48), Expect = 2.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1 / +2
Query: 82 YGAHLQPWCGLAAR 41
YG H+Q WC +R
Sbjct: 239 YGCHIQGWCHSGSR 280
>CL1390CT1493CN2289 cl1390ct1493cn2289 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcs002dC01f.b,m
Length = 965
Score = 24.4 bits (47), Expect = 3.7
Identities = 5/14 (35%), Positives = 10/14 (70%)
Frame = -3 / +3
Query: 287 CDWRRILGS*RLYH 246
C+W RI+ +++H
Sbjct: 483 CNWSRIIAQEQIHH 524
>GI14181219 gi14181219 LENGTH:980bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 980
Score = 24.4 bits (47), Expect = 3.7
Identities = 10/24 (41%), Positives = 14/24 (57%)
Frame = -3 / -2
Query: 281 WRRILGS*RLYHPERLWSLLQPYL 210
WR GS +YH RL+ L+ Y+
Sbjct: 610 WRLAPGSVLIYHLSRLFLLIFSYM 539
>CL118CT153CN454 cl118ct153cn454 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181369,mgns012cG
Length = 953
Score = 24.4 bits (47), Expect = 3.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3 / +1
Query: 206 ARPVPGNISHHSTVQGNQ 153
A P+PG HH +QG+Q
Sbjct: 274 AVPLPGAACHH*PLQGHQ 327
>CL1465CT1569CN2365 cl1465ct1569cn2365 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcs010dH05f.b,mg
Length = 336
Score = 24.4 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1 / -1
Query: 73 HLQPWCGLAARIAKAPLPLTERE 5
H QPW +++P PLT RE
Sbjct: 234 HQQPWKHRPFGPSRSPEPLTPRE 166
>CL1144CT1247CN2036 cl1144ct1247cn2036 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm005bE02f.b,m
Length = 533
Score = 24.4 bits (47), Expect = 3.7
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3 / -2
Query: 80 WRTSSALVRPGRENRQGSVAINRTR 6
WR S RP +G + I TR
Sbjct: 352 WRFESTSARPVAAGVRGGLCIGATR 278
>MGAP010CG05F.B mgap010cG05f.b LENGTH:437bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 437
Score = 24.4 bits (47), Expect = 3.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3 / +2
Query: 194 PGNISHHSTVQGNQPPRSVYNASFDGVGSSRS 99
PG S T Q QPP+ S GSSRS
Sbjct: 35 PGQTSQLETNQDYQPPQ*WKTLSERSSGSSRS 130
>GI14180886 gi14180886 LENGTH:642bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 642
Score = 24.4 bits (47), Expect = 3.7
Identities = 13/34 (38%), Positives = 16/34 (46%)
Frame = -3 / -1
Query: 200 PVPGNISHHSTVQGNQPPRSVYNASFDGVGSSRS 99
P+PG T+ PPRS+ SF SS S
Sbjct: 357 PMPGGPQISVTIPLWTPPRSLVRPSFFDAASSVS 256
>MGMY002BA04F.B mgmy002bA04f.b LENGTH:271bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 271
Score = 24.4 bits (47), Expect = 3.7
Identities = 13/34 (38%), Positives = 17/34 (49%)
Frame = -1 / +2
Query: 265 ARNDYIILRDFGVFFNHIYWLDLCQATYLITQQS 164
AR D + D FF LD+C TYL +Q+
Sbjct: 80 AR*DGVTWADXXXFFLLS*GLDVCTLTYLQNEQA 181
>CL289CT341CN796 cl289ct341cn796 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:8; ESTS:gi14180936,gi253731
Length = 914
Score = 24.0 bits (46), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (58%)
Frame = -2 / +3
Query: 384 KFPKQTISSSERHRRYL*VASRRNSLS 304
+ P + S + R RR+L VASR S S
Sbjct: 276 RLPSTSPSVAPRLRRFLSVASRSRSTS 356
>CL655CT737CN1504 cl655ct737cn1504 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi2537249g,mgap008
Length = 2004
Score = 24.0 bits (46), Expect = 5.0
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = -3 / +3
Query: 257 RLYHPERLWSLLQPYLLARPV 195
RL HPE+ + PY PV
Sbjct: 675 RLRHPEQKRHRIIPYPRGHPV 737
>MGNS013DH02F.B mgns013dH02f.b LENGTH:303bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 303
Score = 24.0 bits (46), Expect = 5.0
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = +3 / +2
Query: 54 PHQG*RCAPYCNSFVRSRTANPIKAR 131
P +G RC Y VR +P +AR
Sbjct: 164 PGRGYRCPHYIRGRVRQGPRHPPEAR 241
>MGNS009CE08F.B mgns009cE08f.b LENGTH:424bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 424
Score = 24.0 bits (46), Expect = 5.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3 / +3
Query: 297 CCHSRNFFLRPLR 335
CCH R RPLR
Sbjct: 228 CCHERQVDSRPLR 266
>CL1205CT1308CN2098 cl1205ct1308cn2098 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm008bB07f.b,mg
Length = 400
Score = 24.0 bits (46), Expect = 5.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2 / +1
Query: 63 PGAAWPRESP 34
P +WPR SP
Sbjct: 151 PSRSWPRRSP 180
>MGCM005BD11F.B mgcm005bD11f.b LENGTH:451bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 451
Score = 24.0 bits (46), Expect = 5.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3 / +1
Query: 116 VGSSRSDERVTVWRTSSALVRPGRENRQGS 27
VGS+ S RT+S+ +RP R R S
Sbjct: 28 VGSTTSLTNPVTTRTTSSTLRPLRNTRPSS 117
>CL1278CT1381CN2172 cl1278ct1381cn2172 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns001cC11f.b,m
Length = 436
Score = 24.0 bits (46), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (53%)
Frame = +3 / -1
Query: 84 CNSFVRSRTANPIKARIVNTSRRL 155
C+S RSR P+ + T +RL
Sbjct: 184 CSSLARSRPFAPVLSATTTTEKRL 113
>CL631CT709CN1466 cl631ct709cn1466 COVERAGE:0.99; CRAWID: 2;
TOTAL_ESTS:8; ESTS:gi2537319g,mgmy001
Length = 825
Score = 24.0 bits (46), Expect = 5.0
Identities = 10/22 (45%), Positives = 11/22 (49%)
Frame = -3 / -2
Query: 290 NCDWRRILGS*RLYHPERLWSL 225
+C W R GS H RLW L
Sbjct: 497 SCPWHRAPGSTAERHR*RLWRL 432
>MGCM006DA09F.B mgcm006dA09f.b LENGTH:334bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 334
Score = 24.0 bits (46), Expect = 5.0
Identities = 15/42 (35%), Positives = 20/42 (46%)
Frame = +3 / +3
Query: 6 SRSVNGNGALAILAARPHQG*RCAPYCNSFVRSRTANPIKAR 131
SRS GNG + AA+ +G*R C R R + + R
Sbjct: 159 SRSGLGNGRSMVRAAQEEEG*RPRR*CVKGRRQRGQDACRRR 284
>CL497CT571CN1267 cl497ct571cn1267 COVERAGE:1.0; CRAWID: 2;
TOTAL_ESTS:1; ESTS:gi3392158g; LENGTH:
Length = 870
Score = 23.5 bits (45), Expect = 6.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 359 LRRDTGDISKWPQEEIP*VAT 297
LRR T +WP++ +P V++
Sbjct: 672 LRRQTTKNHQWPKQPVPSVSS 610
>GI3047302G gi3047302g LENGTH:647bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 647
Score = 23.5 bits (45), Expect = 6.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3 / -1
Query: 110 SSRSDERVTVWRTSSALVRPG 48
SS RV+VW+ + LVR G
Sbjct: 266 SSTKYTRVSVWKQACRLVRNG 204
>GI3391498G gi3391498g LENGTH:883bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 883
Score = 23.5 bits (45), Expect = 6.9
Identities = 9/22 (40%), Positives = 16/22 (71%)
Frame = +1 / +3
Query: 64 AEDVRHTVTRSSDRELPTPSKL 129
AE + V+ +SDR++P P++L
Sbjct: 165 AEVPKRWVSDASDRKVPRPARL 230
>CL482CT555CN1237 cl482ct555cn1237 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:gi3392275g,mgcm004
Length = 882
Score = 23.5 bits (45), Expect = 6.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 383 SSPNRQFHLRRD 348
++PNR FH+R D
Sbjct: 176 ATPNRDFHIRLD 211
>CL486CT560CN1246 cl486ct560cn1246 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3392196g,mgap007
Length = 792
Score = 23.5 bits (45), Expect = 6.9
Identities = 12/39 (30%), Positives = 20/39 (50%)
Frame = -3 / -3
Query: 176 HSTVQGNQPPRSVYNASFDGVGSSRSDERVTVWRTSSAL 60
H+T P+S Y+ + + + S R+ + W SSAL
Sbjct: 763 HNTHSKQHHPKSNYSTA*ETLPSFRARPFFSAWVGSSAL 647
>CL648CT729CN1495 cl648ct729cn1495 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:20; ESTS:gi2537266g,mgmy00
Length = 1058
Score = 23.5 bits (45), Expect = 6.9
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3 / -3
Query: 279 PITVRPCCHSRNFFLRPLRDIACVSPKMKL 368
P T+R CC N +R V+P ++
Sbjct: 471 PCTIRRCCSLMNSSIRSRMGDCSVTPDSRI 382
>MGNS013BA01F.B mgns013bA01f.b LENGTH:425bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 425
Score = 23.5 bits (45), Expect = 6.9
Identities = 9/27 (33%), Positives = 16/27 (58%)
Frame = +2 / +3
Query: 341 RLCLSEDEIVCLGNFGLNRELICLDEI 421
R C+S ++VC+ + L L+ LD +
Sbjct: 315 RRCVSAGKVVCVLDRTLEHTLVLLDGV 395
>CL1360CT1463CN2255 cl1360ct1463cn2255 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns011aH08f.b,m
Length = 539
Score = 23.5 bits (45), Expect = 6.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3 / +1
Query: 3 SSRSVNGNGALAILAARPHQG*RCAPYCNSFVRSRTANP 119
S+ S LA +RP R +P +S SRT P
Sbjct: 187 SASSSTTASCLASTTSRPRPSTRASPAASSVASSRTWPP 303
>MGCS002DF08F.B mgcs002dF08f.b LENGTH:235bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 235
Score = 23.5 bits (45), Expect = 6.9
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1 / +2
Query: 31 PWRFSRPGRTRAEDVRHTVTRSSDRELPTPSK 126
P R RPGR + R R + R P P +
Sbjct: 125 PRRVDRPGRPPRQGTRRHPRRGAARLPPPPPR 220
>GI14181199 gi14181199 LENGTH:661bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 661
Score = 23.5 bits (45), Expect = 6.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3 / -1
Query: 152 PPRSVYNASFDGVGSSRSDER 90
PPRSV G+SRS++R
Sbjct: 460 PPRSVGQPPRGWAGASRSEDR 398
>MGCS002DB04F.B mgcs002dB04f.b LENGTH:548bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 548
Score = 23.5 bits (45), Expect = 6.9
Identities = 12/42 (28%), Positives = 19/42 (44%)
Frame = +1 / +3
Query: 160 PWTVE**DMLPGTGRASKYG*RRLQSLSG*YSRYEPSMRRQS 285
PW + PGT R+S+ R + Y + P+ +R S
Sbjct: 369 PWNPKTQTQPPGTSRSSRRATRPSSRTTSRYPPHRPTPQRWS 494
>MGCM006AB09F.B mgcm006aB09f.b LENGTH:386bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 386
Score = 23.5 bits (45), Expect = 6.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / +2
Query: 287 CDWRRILGS*RLYHPERLWSLL 222
C RR L +HP RLWS+L
Sbjct: 191 CLQRRSLRFPLRHHPCRLWSVL 256
>CL827CT921CN1695 cl827ct921cn1695 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgmy002cH03f.b,mgc
Length = 451
Score = 23.5 bits (45), Expect = 6.9
Identities = 10/34 (29%), Positives = 16/34 (46%)
Frame = +3 / +2
Query: 216 WLKKTPKSLRMI*SLRAEYATPITVRPCCHSRNF 317
WL+ +P+ R + S R + + R C S F
Sbjct: 170 WLQHSPRLSRRLLSTRRSCSKSLPTRSCLSSMVF 271
>CL460CT531CN1195 cl460ct531cn1195 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3392381g,mgcs005
Length = 920
Score = 23.5 bits (45), Expect = 6.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -2
Query: 328 HLEISPVSLRR*NC 369
+ +S VSLRR*NC
Sbjct: 880 YTHVSTVSLRR*NC 839
>CL260CT306CN729 cl260ct306cn729 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181009,gi339148
Length = 1077
Score = 23.5 bits (45), Expect = 6.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2 / -3
Query: 207 GSTCARQHISSLNSPRQSTSAK 142
GSTC R+ + PR+ A+
Sbjct: 646 GSTCRRERTTDRRQPRRRRGAR 581
>MGNS008BH03F.B mgns008bH03f.b LENGTH:279bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 279
Score = 23.5 bits (45), Expect = 6.9
Identities = 12/39 (30%), Positives = 17/39 (42%)
Frame = +3 / +3
Query: 216 WLKKTPKSLRMI*SLRAEYATPITVRPCCHSRNFFLRPL 332
W+ K P SL *+ + ++ P SR L PL
Sbjct: 138 WISKPPTSLAGA*NGSVPWQQLLSSHPL*PSRPLLLLPL 254
>MGNS001AF06F.B mgns001aF06f.b LENGTH:368bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 368
Score = 23.5 bits (45), Expect = 6.9
Identities = 10/28 (35%), Positives = 14/28 (49%)
Frame = -3 / +3
Query: 152 PPRSVYNASFDGVGSSRSDERVTVWRTS 69
PP ++ G +R ER VWRT+
Sbjct: 207 PPLPQAGSTISCCGWTRICERAAVWRTA 290
>CL410CT476CN1072 cl410ct476cn1072 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14180456,gi14180
Length = 1100
Score = 23.5 bits (45), Expect = 6.9
Identities = 13/42 (30%), Positives = 17/42 (39%)
Frame = -3 / +1
Query: 398 RGSNRSSPNRQFHLRRDTGDISKWPQEEIP*VATRSNCDWRR 273
R R NRQ+ +R KW +E + R WRR
Sbjct: 220 RDRQRDRRNRQWERQRQWQRQWKWQREWLRRQRPRVRQQWRR 345
>MGMY006DC01F.B mgmy006dC01f.b LENGTH:380bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 380
Score = 23.5 bits (45), Expect = 6.9
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = -3 / +2
Query: 200 PVPGNISHHSTVQGNQPPRSVYNASF 123
P P I+HH+ N P R+ SF
Sbjct: 182 PPPAVINHHNHRLFNSPARTASQHSF 259
>CL941CT1040CN1820 cl941ct1040cn1820 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy006cB09f.b,mgc
Length = 437
Score = 23.5 bits (45), Expect = 6.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / +2
Query: 57 AAWPRESP 34
AAWPR SP
Sbjct: 239 AAWPRVSP 262
>CL128CT164CN470 cl128ct164cn470 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181350,gi339197
Length = 826
Score = 23.5 bits (45), Expect = 6.9
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = +2 / -2
Query: 59 PGLKMCAIL*LVRQIENCQPHQSSHC 136
PGL+ C * V +C+P S C
Sbjct: 720 PGLQSCVRC*TVYLHSSCRPGHPSTC 643
>MGNS011AA08F.B mgns011aA08f.b LENGTH:391bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 391
Score = 23.5 bits (45), Expect = 6.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1 / -2
Query: 34 WRFSRPGRTRAEDVRHTVTRSSDRELPT 117
WR + AED R R SD + T
Sbjct: 354 WRLGERNQNIAEDNRRVECRQSDSSMVT 271
>GI3392300G gi3392300g LENGTH:872bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 872
Score = 21.2 bits (40), Expect(2) = 8.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2 / +2
Query: 420 ISSRHMSSRFKPKFPKQTISSSERHRRYL 334
+SSRHM+S P T +E+ R +
Sbjct: 476 LSSRHMTSSMLAVRPANTKLYAEKAHRII 562
Score = 19.8 bits (37), Expect(2) = 8.6
Identities = 6/14 (42%), Positives = 10/14 (70%)
Frame = -1 / +2
Query: 340 ISLSGLKKKFLEWQ 299
+ +SGL+ K L W+
Sbjct: 653 LKVSGLRAKSLRWK 694
>GI14181418 gi14181418 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 671
Score = 23.1 bits (44), Expect = 9.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 108 TANPIKARIVNTSR 149
TANPI + NTSR
Sbjct: 275 TANPINKKTKNTSR 316
>CL46CT69CN253 cl46ct69cn253 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:10; ESTS:gi14181503,gi1418107
Length = 1221
Score = 23.1 bits (44), Expect = 9.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1 / -2
Query: 31 PWRFSRPGRTR 63
PWR +PGR R
Sbjct: 359 PWRHRQPGRQR 327
>CL831CT926CN1701 cl831ct926cn1701 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:12; ESTS:mgmy002dB10f.b,mg
Length = 691
Score = 23.1 bits (44), Expect = 9.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 177 SLNSPRQSTSAKC 139
SL SPR +TSA C
Sbjct: 292 SLMSPRSTTSAPC 330
>CL402CT468CN1044 cl402ct468cn1044 COVERAGE:0.98; CRAWID: 2;
TOTAL_ESTS:2; ESTS:gi14180399,gi14180
Length = 1128
Score = 23.1 bits (44), Expect = 9.5
Identities = 9/24 (37%), Positives = 13/24 (53%)
Frame = -1 / -3
Query: 223 FNHIYWLDLCQATYLITQQSKAIN 152
++ IYW +C A L T Q A +
Sbjct: 892 YHIIYWHQICHA*PLSTNQQTAFD 821
>GI3391650G gi3391650g LENGTH:831bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 831
Score = 23.1 bits (44), Expect = 9.5
Identities = 10/22 (45%), Positives = 15/22 (67%)
Frame = -2 / +1
Query: 207 GSTCARQHISSLNSPRQSTSAK 142
GST R S+ ++PR ST+A+
Sbjct: 211 GSTAPRPT*SAPSAPRSSTAAR 276
>GI14181253 gi14181253 LENGTH:660bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 660
Score = 23.1 bits (44), Expect = 9.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / +2
Query: 20 WQRSLGDSRGQAAPGLKMC 76
WQRSL SRG G +C
Sbjct: 197 WQRSLPRSRG**RAGCHVC 253
>CL1063CT1164CN1950 cl1063ct1164cn1950 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm003aE12f.b,m
Length = 569
Score = 23.1 bits (44), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / +1
Query: 187 TYLITQQSKAINLREV 140
T+LI KAINLR V
Sbjct: 34 TFLINSIPKAINLRRV 81
>GI2537292G gi2537292g LENGTH:547bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 547
Score = 23.1 bits (44), Expect = 9.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3 / -1
Query: 248 HPERLWSLLQPYLLARPVPGNISHHST 168
HP + LL P PVP + +H T
Sbjct: 433 HPSCAFLLLSPKSTPHPVPPSNAHLQT 353
>CL1376CT1479CN2274 cl1376ct1479cn2274 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcs001dC01f.b,m
Length = 572
Score = 23.1 bits (44), Expect = 9.5
Identities = 11/29 (37%), Positives = 13/29 (43%)
Frame = +1 / +2
Query: 4 PLVLLMATEPWRFSRPGRTRAEDVRHTVT 90
P LL+ TEP S R HT+T
Sbjct: 131 PSRLLLRTEPSNLSASSRISTRGQLHTLT 217
>MGMY002CH07F.B mgmy002cH07f.b LENGTH:448bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 448
Score = 23.1 bits (44), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = -3 / +2
Query: 134 NASFDGVGSSRSDERVTVWRTS 69
+ASF S+R R + WRTS
Sbjct: 179 SASFGQPRSTRCSRRSSSWRTS 244
Score = 23.1 bits (44), Expect = 9.5
Identities = 11/26 (42%), Positives = 12/26 (45%)
Frame = -3 / +2
Query: 386 RSSPNRQFHLRRDTGDISKWPQEEIP 309
RSS Q H R T S WP +P
Sbjct: 254 RSSSLSQGHSRSWTSGTSCWPATGVP 331
>MGCM012BA03F.B mgcm012bA03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 395
Score = 23.1 bits (44), Expect = 9.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2 / -3
Query: 92 VRQIENCQPHQSSHCKHFAE 151
VRQI +CQ S+C E
Sbjct: 300 VRQIYSCQRRPQSYCVRVEE 241
>MGCM006CG12F.B mgcm006cG12f.b LENGTH:483bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 483
Score = 23.1 bits (44), Expect = 9.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3 / -2
Query: 330 LRDIACVSPKMKLSVW 377
LRD C+S KM S W
Sbjct: 335 LRDGICLSLKMSWSAW 288
>MGCM006AC01F.B mgcm006aC01f.b LENGTH:411bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 411
Score = 23.1 bits (44), Expect = 9.5
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 295 GRTVIGVAYSAR 260
GRT+IGVA++ R
Sbjct: 239 GRTMIGVAFNTR 204
>MGCM002AG01F.B mgcm002aG01f.b LENGTH:384bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 384
Score = 23.1 bits (44), Expect = 9.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 438 IYQTRRISSRHMSSRFKP 385
+++TRRISS SS + P
Sbjct: 273 LHRTRRISSHPTSSTWSP 326
>GI14181379 gi14181379 LENGTH:632bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 632
Score = 23.1 bits (44), Expect = 9.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 104 ENCQPHQSSH 133
E CQPHQ H
Sbjct: 379 EVCQPHQEQH 408
>MGCS001DB05F.B mgcs001dB05f.b LENGTH:308bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 308
Score = 23.1 bits (44), Expect = 9.5
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = -2 / +1
Query: 207 GSTCARQHISSLNSPRQSTSAK 142
G C R H+S + SPR A+
Sbjct: 202 GRPCPRTHMSLIPSPRTLRRAR 267
>GI3391785G gi3391785g LENGTH:787bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 787
Score = 23.1 bits (44), Expect = 9.5
Identities = 8/22 (36%), Positives = 13/22 (58%)
Frame = +2 / +1
Query: 182 ICCLAQVEPVNMVEEDSKVSQD 247
+CC A V P N V+ + ++D
Sbjct: 580 LCCYALVVPTNSVDGSTCYNRD 645
>MGCM008DG05F.B mgcm008dG05f.b LENGTH:478bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 478
Score = 23.1 bits (44), Expect = 9.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 161 GNQPPRSVYNASFDGVGSSR 102
G +PP+ V + GV +SR
Sbjct: 129 GARPPKPVLSGPHAGVSASR 188
>MGCM002AE01F.B mgcm002aE01f.b LENGTH:497bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 497
Score = 23.1 bits (44), Expect = 9.5
Identities = 10/26 (38%), Positives = 11/26 (41%)
Frame = +3 / +3
Query: 75 APYCNSFVRSRTANPIKARIVNTSRR 152
A YC RT N + R V RR
Sbjct: 222 AGYCPKVAGRRTKNAPRPRSVKPGRR 299
>CL1459CT1563CN2359 cl1459ct1563cn2359 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcs009dB10f.b,m
Length = 618
Score = 23.1 bits (44), Expect = 9.5
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +3 / -3
Query: 177 MRYVAWHRSSQ*IWLK 224
M +V+W +S +WL+
Sbjct: 190 MMFVSWEKSKYRVWLR 143
>CL1371CT1474CN2268 cl1371ct1474cn2268 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns012cF09f.b,m
Length = 517
Score = 23.1 bits (44), Expect = 9.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3 / +2
Query: 297 CCHSRNFFLRP 329
CC RNFF P
Sbjct: 32 CCMQRNFFSHP 64
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
Posted date: Mar 22, 2002 5:31 PM
Number of letters in database: 2,543,711
Number of sequences in database: 4717
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3141832
Number of Sequences: 4717
Number of extensions: 45851
Number of successful extensions: 1940
Number of sequences better than 10.0: 111
length of query: 152
length of database: 847,903
effective HSP length: 39
effective length of query: 112
effective length of database: 663,940
effective search space: 74361280
effective search space used: 74361280
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 44 (23.1 bits)