TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_Mgr_IFAFSGB_nr/FgrNCT3P_
1607_H10_P19ZS5.seq
(338 letters)
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
4717 sequences; 2,543,711 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CL964CT1064CN1845 cl964ct1064cn1845 COVERAGE:0.99; CRAWID: 1; TO... 29 0.075
GI3391481G gi3391481g LENGTH:1044bp ; DIRECTION:0 ; CLONE: n/a ;... 28 0.20
MGAP007AB07F.B mgap007aB07f.b LENGTH:360bp ; DIRECTION:0 ; CLONE... 28 0.20
MGCS002BE05F.B mgcs002bE05f.b LENGTH:404bp ; DIRECTION:0 ; CLONE... 27 0.37
MGCM003AE11F.B mgcm003aE11f.b LENGTH:394bp ; DIRECTION:0 ; CLONE... 27 0.37
CL798CT888CN1662 cl798ct888cn1662 COVERAGE:1.0; CRAWID: 1; TOTAL... 27 0.51
CL456CT526CN1182 cl456ct526cn1182 COVERAGE:0.97; CRAWID: 1; TOTA... 27 0.51
CL798CT887CN1661 cl798ct887cn1661 COVERAGE:1.0; CRAWID: 1; TOTAL... 27 0.51
MGAP007CD12F.B mgap007cD12f.b LENGTH:572bp ; DIRECTION:0 ; CLONE... 26 0.70
CL115CT148CN439 cl115ct148cn439 COVERAGE:1.0; CRAWID: 2; TOTAL_E... 26 0.70
MGCM003DH12F.B mgcm003dH12f.b LENGTH:529bp ; DIRECTION:0 ; CLONE... 26 0.96
GI14180594 gi14180594 LENGTH:627bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 1.3
CL349CT408CN894 cl349ct408cn894 COVERAGE:0.96; CRAWID: 1; TOTAL_... 25 1.8
MGNS007CH08F.B mgns007cH08f.b LENGTH:453bp ; DIRECTION:0 ; CLONE... 25 1.8
MGCS010BF02F.B mgcs010bF02f.b LENGTH:523bp ; DIRECTION:0 ; CLONE... 25 1.8
CL502CT576CN1276 cl502ct576cn1276 COVERAGE:0.98; CRAWID: 1; TOTA... 25 1.8
MGNS009BG01F.B mgns009bG01f.b LENGTH:361bp ; DIRECTION:0 ; CLONE... 25 1.8
MGNS002BB01F.B mgns002bB01f.b LENGTH:499bp ; DIRECTION:0 ; CLONE... 25 1.8
MGNS013DH02F.B mgns013dH02f.b LENGTH:303bp ; DIRECTION:0 ; CLONE... 25 1.8
MGCM003BH11F.B mgcm003bH11f.b LENGTH:188bp ; DIRECTION:0 ; CLONE... 25 1.8
CL1003CT1104CN1887 cl1003ct1104cn1887 COVERAGE:0.97; CRAWID: 1; ... 25 1.8
MGCM003DD11F.B mgcm003dD11f.b LENGTH:457bp ; DIRECTION:0 ; CLONE... 24 2.5
MGMY006DA09F.B mgmy006dA09f.b LENGTH:378bp ; DIRECTION:0 ; CLONE... 24 2.5
CL764CT853CN1627 cl764ct853cn1627 COVERAGE:0.99; CRAWID: 1; TOTA... 24 2.5
CL562CT636CN1373 cl562ct636cn1373 COVERAGE:1.0; CRAWID: 1; TOTAL... 24 3.4
CL610CT688CN1439 cl610ct688cn1439 COVERAGE:1.0; CRAWID: 1; TOTAL... 24 3.4
MGCS006BF12F.B mgcs006bF12f.b LENGTH:264bp ; DIRECTION:0 ; CLONE... 24 3.4
MGNS010BB04F.B mgns010bB04f.b LENGTH:517bp ; DIRECTION:0 ; CLONE... 24 3.4
MGCS006AA10F.B mgcs006aA10f.b LENGTH:304bp ; DIRECTION:0 ; CLONE... 24 3.4
CL1281CT1384CN2175 cl1281ct1384cn2175 COVERAGE:0.98; CRAWID: 1; ... 24 3.4
CL976CT1077CN1858 cl976ct1077cn1858 COVERAGE:0.99; CRAWID: 1; TO... 24 3.4
MGAP008BC11F.B mgap008bC11f.b LENGTH:365bp ; DIRECTION:0 ; CLONE... 24 4.7
CL872CT970CN1745 cl872ct970cn1745 COVERAGE:1.0; CRAWID: 1; TOTAL... 24 4.7
CL1099CT1202CN1989 cl1099ct1202cn1989 COVERAGE:0.99; CRAWID: 1; ... 24 4.7
MGCS006DH04F.B mgcs006dH04f.b LENGTH:440bp ; DIRECTION:0 ; CLONE... 24 4.7
MGNS013AA03F.B mgns013aA03f.b LENGTH:335bp ; DIRECTION:0 ; CLONE... 24 4.7
CL356CT419CN937 cl356ct419cn937 COVERAGE:0.98; CRAWID: 1; TOTAL_... 24 4.7
CL361CT424CN943 cl361ct424cn943 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 6.4
CL235CT278CN685 cl235ct278cn685 COVERAGE:0.98; CRAWID: 1; TOTAL_... 23 6.4
CL415CT482CN1083 cl415ct482cn1083 COVERAGE:0.99; CRAWID: 1; TOTA... 23 6.4
MGCS010AG08F.B mgcs010aG08f.b LENGTH:536bp ; DIRECTION:0 ; CLONE... 23 6.4
MGCS005DD05F.B mgcs005dD05f.b LENGTH:433bp ; DIRECTION:0 ; CLONE... 23 6.4
CL720CT805CN1576 cl720ct805cn1576 COVERAGE:0.99; CRAWID: 1; TOTA... 23 6.4
CL58CT84CN298 cl58ct84cn298 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS... 23 6.4
MGAP007CC02F.B mgap007cC02f.b LENGTH:406bp ; DIRECTION:0 ; CLONE... 23 6.4
GI14180823 gi14180823 LENGTH:709bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 6.4
GI14180445 gi14180445 LENGTH:704bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 6.4
CL206CT246CN630 cl206ct246cn630 COVERAGE:1.0; CRAWID: 3; TOTAL_E... 23 6.4
CL1262CT1365CN2155 cl1262ct1365cn2155 COVERAGE:0.97; CRAWID: 1; ... 23 6.4
CL896CT995CN1773 cl896ct995cn1773 COVERAGE:0.98; CRAWID: 1; TOTA... 23 6.4
MGCS002AE05F.B mgcs002aE05f.b LENGTH:470bp ; DIRECTION:0 ; CLONE... 23 6.4
CL1183CT1286CN2075 cl1183ct1286cn2075 COVERAGE:0.99; CRAWID: 1; ... 23 8.8
CL615CT693CN1445 cl615ct693cn1445 COVERAGE:0.99; CRAWID: 1; TOTA... 23 8.8
GI2537320G gi2537320g LENGTH:951bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.8
CL480CT553CN1233 cl480ct553cn1233 COVERAGE:0.99; CRAWID: 1; TOTA... 23 8.8
MGCS004AE09F.B mgcs004aE09f.b LENGTH:291bp ; DIRECTION:0 ; CLONE... 23 8.8
GI3392157G gi3392157g LENGTH:741bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.8
GI3391624G gi3391624g LENGTH:886bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.8
CL582CT656CN1402 cl582ct656cn1402 COVERAGE:1.0; CRAWID: 1; TOTAL... 23 8.8
MGMY003BA04F.B mgmy003bA04f.b LENGTH:440bp ; DIRECTION:0 ; CLONE... 23 8.8
MGCS006BD10F.B mgcs006bD10f.b LENGTH:212bp ; DIRECTION:0 ; CLONE... 23 8.8
MGCM008CA08F.B mgcm008cA08f.b LENGTH:376bp ; DIRECTION:0 ; CLONE... 23 8.8
MGCS005DE01F.B mgcs005dE01f.b LENGTH:465bp ; DIRECTION:0 ; CLONE... 23 8.8
MGCS001DC11F.B mgcs001dC11f.b LENGTH:370bp ; DIRECTION:0 ; CLONE... 23 8.8
MGMY002AB03F.B mgmy002aB03f.b LENGTH:511bp ; DIRECTION:0 ; CLONE... 23 8.8
MGAP007BF04F.B mgap007bF04f.b LENGTH:442bp ; DIRECTION:0 ; CLONE... 23 8.8
CL258CT304CN727 cl258ct304cn727 COVERAGE:0.98; CRAWID: 1; TOTAL_... 23 8.8
MGCM008BH05F.B mgcm008bH05f.b LENGTH:409bp ; DIRECTION:0 ; CLONE... 23 8.8
>CL964CT1064CN1845 cl964ct1064cn1845 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm001aF10f.b,mg
Length = 405
Score = 29.5 bits (58), Expect = 0.075
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2 / +1
Query: 14 STGCYAPRCTHFDAPDYSSGLGYGHPSIGNDNTHHR 121
+ GC A RC F PD G G +T HR
Sbjct: 226 TAGCVAIRCRGFSCPDNLQGYAKGSSGHLGRSTPHR 333
>GI3391481G gi3391481g LENGTH:1044bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1044
Score = 28.1 bits (55), Expect = 0.20
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1 / +2
Query: 137 RLRSSSGGECCHCQSTDVHIR 75
R RSSS G C C+ +H+R
Sbjct: 77 RKRSSSAGGLCWCRRNQMHLR 139
>MGAP007AB07F.B mgap007aB07f.b LENGTH:360bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 360
Score = 28.1 bits (55), Expect = 0.20
Identities = 10/29 (34%), Positives = 16/29 (54%)
Frame = +2 / -2
Query: 104 DNTHHRCSNEA*YDPSSLG*TNAICLAGV 190
+N H CS+ YDP L + IC++ +
Sbjct: 149 NNDRHGCSSSCPYDPLMLAASGRICVSSL 63
>MGCS002BE05F.B mgcs002bE05f.b LENGTH:404bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 404
Score = 27.2 bits (53), Expect = 0.37
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / -3
Query: 224 HDFSHKFLLDNRLPPDIWH*FTQVR 150
H F KFLL LP D+ H TQ R
Sbjct: 396 HSFLDKFLLAPLLPDDVRHAETQRR 322
Score = 23.1 bits (44), Expect = 6.4
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = +1 / -1
Query: 16 YWMLCSEMYSFRC 54
+W LC MY C
Sbjct: 314 FWFLCCFMYDLEC 276
>MGCM003AE11F.B mgcm003aE11f.b LENGTH:394bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 394
Score = 27.2 bits (53), Expect = 0.37
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = +1 / +1
Query: 235 SSIPLTTAWRSERAHMRRCMLSW 303
+S PL T WR R RC +W
Sbjct: 184 NSTPLHTPWRRPRRS*SRCTATW 252
>CL798CT888CN1662 cl798ct888cn1662 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:mgmy002aC03f.b; LEN
Length = 451
Score = 26.7 bits (52), Expect = 0.51
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 293 IQRLICALSDLQAVVNGML 237
++RL A DLQAVV+G+L
Sbjct: 432 LERLTAAPDDLQAVVDGVL 376
>CL456CT526CN1182 cl456ct526cn1182 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14180117,mgap007
Length = 733
Score = 26.7 bits (52), Expect = 0.51
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1 / -2
Query: 247 LTTAWRSERAHMRRCMLSWR 306
+T+ WRS R RR SWR
Sbjct: 420 VTSPWRSARRASRRSSRSWR 361
>CL798CT887CN1661 cl798ct887cn1661 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:mgns004dE05f.b; LEN
Length = 556
Score = 26.7 bits (52), Expect = 0.51
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 293 IQRLICALSDLQAVVNGML 237
++RL A DLQAVV+G+L
Sbjct: 390 LERLTAAPDDLQAVVDGVL 334
>MGAP007CD12F.B mgap007cD12f.b LENGTH:572bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 572
Score = 26.3 bits (51), Expect = 0.70
Identities = 14/39 (35%), Positives = 21/39 (52%)
Frame = -2 / -3
Query: 277 ALFRTSRPSSTVCLKGPIMTSLTSSFLITDSRQTYGISL 161
AL + P T C G + L +SFL+ SR+++G L
Sbjct: 174 ALS*RASPLVTFCSLGWFVVVLYNSFLVCLSRRSFGFYL 58
>CL115CT148CN439 cl115ct148cn439 COVERAGE:1.0; CRAWID: 2;
TOTAL_ESTS:1; ESTS:gi3392117g; LENGTH:7
Length = 794
Score = 26.3 bits (51), Expect = 0.70
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1 / -3
Query: 173 WH*FTQVRKDHIRLRSSSGGECCHC 99
W F++ RK I LRSSSG E C
Sbjct: 180 WALFSRPRKRKITLRSSSGFEEGFC 106
>MGCM003DH12F.B mgcm003dH12f.b LENGTH:529bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 529
Score = 25.8 bits (50), Expect = 0.96
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 152 RKDHIRLRSSSGGEC 108
R+DH +R SS +C
Sbjct: 482 RRDHFGIRCSSNYQC 438
>GI14180594 gi14180594 LENGTH:627bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 627
Score = 25.3 bits (49), Expect = 1.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1 / -2
Query: 164 FTQVRKDHIRLRSSSGGECCHCQS 93
+ + +D+ R SSSGG+C +S
Sbjct: 389 YMDLPRDYYRRESSSGGDCFKIRS 318
>CL349CT408CN894 cl349ct408cn894 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14180718,gi339177
Length = 789
Score = 24.9 bits (48), Expect = 1.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1 / +3
Query: 143 HIRLRSSSGGECCHCQ 96
HI R +GG CHC+
Sbjct: 330 HILRRPDAGGWLCHCR 377
>MGNS007CH08F.B mgns007cH08f.b LENGTH:453bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 453
Score = 24.9 bits (48), Expect = 1.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1 / +3
Query: 134 LRSSSGGECCHCQSTDVH 81
LRS+ CCH ST +
Sbjct: 258 LRSARASRCCHSSSTSAN 311
>MGCS010BF02F.B mgcs010bF02f.b LENGTH:523bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 523
Score = 24.9 bits (48), Expect = 1.8
Identities = 9/22 (40%), Positives = 13/22 (58%)
Frame = +1 / +1
Query: 259 WRSERAHMRRCMLSWRLLLVAL 324
WR ++ +R WR LLVA+
Sbjct: 364 WRGQQVDIRPGRPGWRALLVAI 429
>CL502CT576CN1276 cl502ct576cn1276 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:7; ESTS:gi3392135g,mgmy003
Length = 833
Score = 24.9 bits (48), Expect = 1.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1 / -1
Query: 259 WRSERAHMRRCMLSWRL 309
WR + H R+ + +WRL
Sbjct: 164 WRRDARHQRQFVTTWRL 114
>MGNS009BG01F.B mgns009bG01f.b LENGTH:361bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 361
Score = 24.9 bits (48), Expect = 1.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2 / +2
Query: 247 TVCLKGPIMTSLTSSFLITDSRQTYGISLPK 155
T C + + +++TSS +T +RQ Y +L +
Sbjct: 239 TCC*RARVSSAMTSSTPLTAARQHYSSNLAR 331
>MGNS002BB01F.B mgns002bB01f.b LENGTH:499bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 499
Score = 24.9 bits (48), Expect = 1.8
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1 / -1
Query: 119 GGECCHCQ 96
GG CCHC+
Sbjct: 100 GGHCCHCR 77
>MGNS013DH02F.B mgns013dH02f.b LENGTH:303bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 303
Score = 24.9 bits (48), Expect = 1.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 322 MRLKAVSMRAYNVSYALFRTSRPSSTVCLKGPIMTS 215
M ++AVS Y + + RT SST ++ P+ +S
Sbjct: 274 MYMRAVSTSLYPRFWRMSRTLPNSSTDVMRAPVASS 167
>MGCM003BH11F.B mgcm003bH11f.b LENGTH:188bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 188
Score = 24.9 bits (48), Expect = 1.8
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = +1 / +1
Query: 244 PLTTAWRSERAHMRRCMLSWRL 309
P ++AW + RA C WRL
Sbjct: 49 PTSSAWPAARASRLCCRRCWRL 114
>CL1003CT1104CN1887 cl1003ct1104cn1887 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:5; ESTS:mgcm001dB01f.b,m
Length = 582
Score = 24.9 bits (48), Expect = 1.8
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -1 / -1
Query: 281 ICALSDLQAVVNGML 237
+CA ++L A+VNG+L
Sbjct: 309 VCATNNLGAIVNGLL 265
>MGCM003DD11F.B mgcm003dD11f.b LENGTH:457bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 457
Score = 24.4 bits (47), Expect = 2.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1 / -1
Query: 116 GECCHCQSTDV 84
G CC CQ DV
Sbjct: 325 GHCCRCQGEDV 293
>MGMY006DA09F.B mgmy006dA09f.b LENGTH:378bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 378
Score = 24.4 bits (47), Expect = 2.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2 / -2
Query: 179 LAGVGYQEGTCERSHDGTFQAYR*R 253
L YQ+ C R DG Q++R*+
Sbjct: 203 LCAAKYQQECCPRKTDGPGQSWR*Q 129
>CL764CT853CN1627 cl764ct853cn1627 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgmy001cD11f.b,mgm
Length = 726
Score = 24.4 bits (47), Expect = 2.5
Identities = 13/35 (37%), Positives = 21/35 (59%)
Frame = -2 / +1
Query: 265 TSRPSSTVCLKGPIMTSLTSSFLITDSRQTYGISL 161
TSRPSS+ + P+ ++ SS L + +R + SL
Sbjct: 193 TSRPSSSPSVSRPMTSAWRSSSLSSRARTSRS*SL 297
>CL562CT636CN1373 cl562ct636cn1373 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:3; ESTS:gi3391822g,mgap007a
Length = 1095
Score = 24.0 bits (46), Expect = 3.4
Identities = 7/19 (36%), Positives = 14/19 (72%)
Frame = +1 / -3
Query: 274 AHMRRCMLSWRLLLVALTT 330
AHMR ++W+ +++A+ T
Sbjct: 709 AHMRTPNVAWQAMIIAVAT 653
>CL610CT688CN1439 cl610ct688cn1439 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3391523g,mgcm002b
Length = 987
Score = 24.0 bits (46), Expect = 3.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 173 ICLAGVGYQEGTCER 217
IC+ GVGYQ+ + R
Sbjct: 590 ICVLGVGYQDMSARR 634
>MGCS006BF12F.B mgcs006bF12f.b LENGTH:264bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 264
Score = 24.0 bits (46), Expect = 3.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 74 LGYGHPSIGNDNTHHRC 124
+GYG P++GN++ C
Sbjct: 260 VGYGAPAMGNNDQRRVC 210
>MGNS010BB04F.B mgns010bB04f.b LENGTH:517bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 517
Score = 24.0 bits (46), Expect = 3.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +3
Query: 146 DHIRLRSSSGGECCHCQSTD 87
DHIR+RS+ G CQ D
Sbjct: 354 DHIRIRSTMGILYYGCQCRD 413
>MGCS006AA10F.B mgcs006aA10f.b LENGTH:304bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 304
Score = 24.0 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1 / -3
Query: 262 RSERAHMRRCMLSWRL 309
RS R RRC WRL
Sbjct: 137 RSSRCTWRRCCSRWRL 90
>CL1281CT1384CN2175 cl1281ct1384cn2175 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:16; ESTS:mgns001cH01f.b,
Length = 1149
Score = 24.0 bits (46), Expect = 3.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 88 SVDWQ*QHSPPLLER 132
S+DW +HSP L R
Sbjct: 780 SIDWDRRHSPDLRNR 736
>CL976CT1077CN1858 cl976ct1077cn1858 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm001bE12f.b,mg
Length = 464
Score = 24.0 bits (46), Expect = 3.4
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1 / -3
Query: 175 MSGGSRLSRRNL*EKS*WDLSSIPLTTAWRSERAHMRRCMLSWR 306
+ G S R * S S P T WR R R SWR
Sbjct: 459 LGGSSTWGARGS*AASQRASSPRPSRTRWRKHRRARRTDPCSWR 328
>MGAP008BC11F.B mgap008bC11f.b LENGTH:365bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 365
Score = 23.5 bits (45), Expect = 4.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 229 DLSSIPLTTAWRSER 273
D +PL AWR+ER
Sbjct: 212 DRYMLPLAVAWRNER 168
>CL872CT970CN1745 cl872ct970cn1745 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy003cC03f.b,mgns
Length = 339
Score = 23.5 bits (45), Expect = 4.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 49 RCS*LFFRTRIWTSVDW 99
RC +FF +WT V W
Sbjct: 192 RCRTVFFCQVVWTQVWW 242
>CL1099CT1202CN1989 cl1099ct1202cn1989 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm004aG10f.b,m
Length = 426
Score = 23.5 bits (45), Expect = 4.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3 / +1
Query: 192 PTPARHMALVYPSEEG 145
P A HM L+Y + EG
Sbjct: 217 PVSAAHMGLIYVNPEG 264
>MGCS006DH04F.B mgcs006dH04f.b LENGTH:440bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 440
Score = 23.5 bits (45), Expect = 4.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1 / +2
Query: 244 PLTTAWRSERAHMRRCMLS 300
P +W S AH++RC L+
Sbjct: 41 PHQLSWPSNSAHVQRCGLT 97
>MGNS013AA03F.B mgns013aA03f.b LENGTH:335bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 335
Score = 23.5 bits (45), Expect = 4.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1 / -1
Query: 161 TQVRKDHIRLRSSSGGECCH 102
+Q RK H++ R GG C
Sbjct: 155 SQGRKSHLQCRRC*GGWECQ 96
>CL356CT419CN937 cl356ct419cn937 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi14180690,gi339179
Length = 826
Score = 23.5 bits (45), Expect = 4.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1 / -2
Query: 244 PLTTAWRSERAHMRR 288
P T AW AHMRR
Sbjct: 654 PKTLAWLKVLAHMRR 610
>CL361CT424CN943 cl361ct424cn943 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:gi14180679,gi141806
Length = 1270
Score = 23.1 bits (44), Expect = 6.4
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +2 / +2
Query: 26 YAPRCTHFDAPDYSS 70
Y R +HF P YSS
Sbjct: 284 YGRRHSHFQVPQYSS 328
>CL235CT278CN685 cl235ct278cn685 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:7; ESTS:gi14181088,gi141810
Length = 933
Score = 23.1 bits (44), Expect = 6.4
Identities = 7/16 (43%), Positives = 9/16 (55%)
Frame = +3 / +2
Query: 135 PDMILPHLGKLMPYVW 182
P+ I PH G + P W
Sbjct: 761 PEQISPHKGAIYPPYW 808
>CL415CT482CN1083 cl415ct482cn1083 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgmy002dA12f.b,mgm
Length = 495
Score = 23.1 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1 / -2
Query: 254 VVNGMLERSHHDFSHKFLL 198
V+N SHH F +FLL
Sbjct: 416 VINSARHSSHHLFKPQFLL 360
>MGCS010AG08F.B mgcs010aG08f.b LENGTH:536bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 536
Score = 23.1 bits (44), Expect = 6.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1 / +3
Query: 137 RLRSSSGGECCHC 99
R RSS G CC C
Sbjct: 249 RKRSSDGLRCCKC 287
>MGCS005DD05F.B mgcs005dD05f.b LENGTH:433bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 433
Score = 23.1 bits (44), Expect = 6.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1 / -1
Query: 119 GGECCHC 99
GGECC C
Sbjct: 388 GGECCCC 368
>CL720CT805CN1576 cl720ct805cn1576 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy001aA01f.b,mgn
Length = 561
Score = 23.1 bits (44), Expect = 6.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2 / +3
Query: 122 CSNEA*YDPSSLG*TNAICLAGVGYQEGTCERS 220
CS++ Y+P ++ N I L GV +G + S
Sbjct: 342 CSDKYPYEPPTIHFINKINLPGVDPTDGRVDPS 440
>CL58CT84CN298 cl58ct84cn298 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:23; ESTS:gi14181479,gi1418147
Length = 2063
Score = 23.1 bits (44), Expect = 6.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -1 / +2
Query: 161 TQVRKDHIRLRSSSGGECCH 102
+ V KDH+ G CCH
Sbjct: 341 SHVHKDHLCRPHGPPGLCCH 400
>MGAP007CC02F.B mgap007cC02f.b LENGTH:406bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 406
Score = 23.1 bits (44), Expect = 6.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1 / +3
Query: 137 RLRSSSGGECCH 102
RLRS S CCH
Sbjct: 258 RLRSRSATTCCH 293
>GI14180823 gi14180823 LENGTH:709bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 709
Score = 23.1 bits (44), Expect = 6.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1 / -1
Query: 146 DHIRLRSSSGGECCHCQSTDVHI 78
++ + SS G E CH D HI
Sbjct: 226 ENTHMNSSCGNEYCHEDC*DRHI 158
>GI14180445 gi14180445 LENGTH:704bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 704
Score = 23.1 bits (44), Expect = 6.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 111 VLSLPIDGCPYPS 73
VLSL DGCP+ S
Sbjct: 434 VLSLRRDGCPHQS 472
>CL206CT246CN630 cl206ct246cn630 COVERAGE:1.0; CRAWID: 3;
TOTAL_ESTS:1; ESTS:gi3391450g; LENGTH:1
Length = 1026
Score = 23.1 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1 / +2
Query: 155 VRKDHIRLRSSSGGECCHC 99
VR+ H LRS+S C C
Sbjct: 629 VRERHXSLRSNSVNHTCTC 685
>CL1262CT1365CN2155 cl1262ct1365cn2155 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns001aA02f.b,m
Length = 440
Score = 23.1 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1 / -1
Query: 254 VVNGMLERSHHDFSHKFLL 198
+VN +R HH F FLL
Sbjct: 425 IVNTTTDRPHHLFKPHFLL 369
>CL896CT995CN1773 cl896ct995cn1773 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:17; ESTS:mgmy004aH01f.b,mg
Length = 795
Score = 23.1 bits (44), Expect = 6.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2 / -3
Query: 185 GVGYQEGTCERSHDGTFQAYR*RRP 259
GVG TC H Q R RRP
Sbjct: 256 GVGRGGATCSGLHHAATQHRRARRP 182
>MGCS002AE05F.B mgcs002aE05f.b LENGTH:470bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 470
Score = 23.1 bits (44), Expect = 6.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2 / +2
Query: 50 DAPDYSSGLGYGHPSIGNDNTHHRCSNEA 136
D D GL HP +G+ H C ++
Sbjct: 290 DHDDIRQGLCCPHPQLGSRIRSHTCVQDS 376
>CL1183CT1286CN2075 cl1183ct1286cn2075 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgcm007aB01f.b,m
Length = 510
Score = 22.6 bits (43), Expect = 8.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3 / +1
Query: 111 VLSLPIDGCPYPSPE 67
+ LPI+G P P P+
Sbjct: 100 IQKLPINGAPTPQPK 144
>CL615CT693CN1445 cl615ct693cn1445 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3391496g,mgmy002
Length = 1014
Score = 22.6 bits (43), Expect = 8.8
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = +3 / +2
Query: 144 ILPHLGKLMPYVWRESVIKKE 206
ILPH G YV+R KK+
Sbjct: 695 ILPHNG*AXSYVYRNRRTKKK 757
>GI2537320G gi2537320g LENGTH:951bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 951
Score = 22.6 bits (43), Expect = 8.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1 / -3
Query: 259 WRSERAHMRRCMLSWRLL 312
WRS H RR WR L
Sbjct: 613 WRSADKHSRR*RSRWRWL 560
>CL480CT553CN1233 cl480ct553cn1233 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:6; ESTS:gi2537287g,gi25372
Length = 1531
Score = 22.6 bits (43), Expect = 8.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1 / +3
Query: 62 SQEHRNEYISEHSIQYF 12
S HRN YI I YF
Sbjct: 1458 SPRHRNVYIMNE*ILYF 1508
>MGCS004AE09F.B mgcs004aE09f.b LENGTH:291bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 291
Score = 22.6 bits (43), Expect = 8.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1 / -1
Query: 262 RSERAHMRRCMLSW 303
RSER RRC SW
Sbjct: 258 RSERCAGRRCRGSW 217
>GI3392157G gi3392157g LENGTH:741bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 741
Score = 22.6 bits (43), Expect = 8.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / -1
Query: 274 AHMRRCMLSWRLLLVALTTS 333
+++R C+L W LL LT S
Sbjct: 63 SYLR*CVLQWLLLRGELTES 4
>GI3391624G gi3391624g LENGTH:886bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 886
Score = 22.6 bits (43), Expect = 8.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1 / -2
Query: 244 PLTTAWRSERA 276
PLT AWR RA
Sbjct: 474 PLTPAWRGPRA 442
>CL582CT656CN1402 cl582ct656cn1402 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:gi3391712g; LENGTH:
Length = 1230
Score = 22.6 bits (43), Expect = 8.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3 / +2
Query: 156 LGKLMPYVWR 185
LG L PYVW+
Sbjct: 950 LGNLPPYVWK 979
>MGMY003BA04F.B mgmy003bA04f.b LENGTH:440bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 440
Score = 22.6 bits (43), Expect = 8.8
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = +1 / +1
Query: 235 SSIPLTTAWRSERAHMRR 288
SS+P WR ER+ + R
Sbjct: 307 SSLPTRQRWRRERSMLSR 360
>MGCS006BD10F.B mgcs006bD10f.b LENGTH:212bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 212
Score = 22.6 bits (43), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / +2
Query: 32 PRCTHFDAPDYSSGL 76
PR THF +YSS L
Sbjct: 41 PRETHFPRAEYSSQL 85
>MGCM008CA08F.B mgcm008cA08f.b LENGTH:376bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 376
Score = 22.6 bits (43), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2 / +3
Query: 86 HPSIGNDNTHHRCSNEA 136
HP + NTHH S+++
Sbjct: 138 HPELIPRNTHHEMSSQS 188
>MGCS005DE01F.B mgcs005dE01f.b LENGTH:465bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 465
Score = 22.6 bits (43), Expect = 8.8
Identities = 8/26 (30%), Positives = 13/26 (49%)
Frame = -1 / +2
Query: 239 LERSHHDFSHKFLLDNRLPPDIWH*F 162
L S +D+SH ++ D+W F
Sbjct: 2 LHNSQNDYSHPCFSCGKVTGDLWERF 79
>MGCS001DC11F.B mgcs001dC11f.b LENGTH:370bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 370
Score = 22.6 bits (43), Expect = 8.8
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 286 RCMLSWRLLLVAL 324
RC+L WR+++ L
Sbjct: 249 RCLLHWRMMMCLL 211
>MGMY002AB03F.B mgmy002aB03f.b LENGTH:511bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 511
Score = 22.6 bits (43), Expect = 8.8
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = +2 / +3
Query: 287 VVCSHGDCF*SH*QHRL 337
V G+C *SH* H+L
Sbjct: 333 VTAEKGNCT*SH*VHKL 383
>MGAP007BF04F.B mgap007bF04f.b LENGTH:442bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 442
Score = 22.6 bits (43), Expect = 8.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1 / -1
Query: 137 RLRSSSGGECC 105
RLR + GG CC
Sbjct: 295 RLRCAEGGPCC 263
>CL258CT304CN727 cl258ct304cn727 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181013,gi339146
Length = 945
Score = 22.6 bits (43), Expect = 8.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 280 YALFRTSRPSSTVCLKGPIMTSLTSS 203
+ L RT RPS ++ I SLT+S
Sbjct: 539 HTLVRTHRPSRSISTLVFISASLTAS 462
>MGCM008BH05F.B mgcm008bH05f.b LENGTH:409bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 409
Score = 22.6 bits (43), Expect = 8.8
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 125 SSGGECCHCQSTDVH 81
+SGG+C C + +H
Sbjct: 345 NSGGDCFKCCAQKLH 389
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
Posted date: Mar 22, 2002 5:31 PM
Number of letters in database: 2,543,711
Number of sequences in database: 4717
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2283313
Number of Sequences: 4717
Number of extensions: 34799
Number of successful extensions: 1293
Number of sequences better than 10.0: 93
length of query: 112
length of database: 847,903
effective HSP length: 37
effective length of query: 75
effective length of database: 673,374
effective search space: 50503050
effective search space used: 50503050
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 43 (22.6 bits)