TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_Mgr_IFAFSGB_nr/FgrNCT3P_
1610_G07_M14ZT.seq
(269 letters)
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
4717 sequences; 2,543,711 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CL1317CT1420CN2212 cl1317ct1420cn2212 COVERAGE:0.99; CRAWID: 1; ... 30 0.038
MGCM007BD08F.B mgcm007bD08f.b LENGTH:511bp ; DIRECTION:0 ; CLONE... 29 0.052
CL39CT45CN154 cl39ct45cn154 COVERAGE:0.98; CRAWID: 2; TOTAL_ESTS... 27 0.26
CL964CT1064CN1845 cl964ct1064cn1845 COVERAGE:0.99; CRAWID: 1; TO... 27 0.35
CL848CT944CN1719 cl848ct944cn1719 COVERAGE:0.98; CRAWID: 1; TOTA... 26 0.48
GI14180544 gi14180544 LENGTH:647bp ; DIRECTION:0 ; CLONE: n/a ; ... 26 0.48
MGMY005BC06F.B mgmy005bC06f.b LENGTH:253bp ; DIRECTION:0 ; CLONE... 26 0.48
CL198CT238CN617 cl198ct238cn617 COVERAGE:1.0; CRAWID: 1; TOTAL_E... 25 0.91
MGAP007AC11F.B mgap007aC11f.b LENGTH:390bp ; DIRECTION:0 ; CLONE... 25 0.91
CL850CT946CN1721 cl850ct946cn1721 COVERAGE:0.96; CRAWID: 1; TOTA... 25 1.3
MGCS010AG02F.B mgcs010aG02f.b LENGTH:473bp ; DIRECTION:0 ; CLONE... 25 1.3
CL75CT106CN366 cl75ct106cn366 COVERAGE:1.0; CRAWID: 1; TOTAL_EST... 24 1.7
CL648CT729CN1495 cl648ct729cn1495 COVERAGE:0.98; CRAWID: 1; TOTA... 24 1.7
CL1166CT1269CN2058 cl1166ct1269cn2058 COVERAGE:0.96; CRAWID: 1; ... 24 1.7
CL624CT702CN1457 cl624ct702cn1457 COVERAGE:0.99; CRAWID: 1; TOTA... 24 2.4
GI14180764 gi14180764 LENGTH:642bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 2.4
MGCS003CA06F.B mgcs003cA06f.b LENGTH:343bp ; DIRECTION:0 ; CLONE... 24 2.4
CL900CT999CN1778 cl900ct999cn1778 COVERAGE:0.99; CRAWID: 1; TOTA... 24 2.4
CL37CT43CN151 cl37ct43cn151 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS... 24 2.4
CL1302CT1405CN2196 cl1302ct1405cn2196 COVERAGE:0.98; CRAWID: 1; ... 24 2.4
CL245CT288CN705 cl245ct288cn705 COVERAGE:0.99; CRAWID: 1; TOTAL_... 24 3.2
CL54CT79CN277 cl54ct79cn277 COVERAGE:0.97; CRAWID: 2; TOTAL_ESTS... 24 3.2
MGCS003CE06F.B mgcs003cE06f.b LENGTH:297bp ; DIRECTION:0 ; CLONE... 24 3.2
MGAP008CD05F.B mgap008cD05f.b LENGTH:328bp ; DIRECTION:0 ; CLONE... 24 3.2
CL145CT182CN503 cl145ct182cn503 COVERAGE:0.98; CRAWID: 1; TOTAL_... 24 3.2
CL1327CT1430CN2222 cl1327ct1430cn2222 COVERAGE:0.99; CRAWID: 1; ... 24 3.2
MGCS009AG04F.B mgcs009aG04f.b LENGTH:519bp ; DIRECTION:0 ; CLONE... 23 4.5
MGCS008BD04F.B mgcs008bD04f.b LENGTH:296bp ; DIRECTION:0 ; CLONE... 23 4.5
MGCM008BD01F.B mgcm008bD01f.b LENGTH:432bp ; DIRECTION:0 ; CLONE... 23 4.5
MGNS007BH03F.B mgns007bH03f.b LENGTH:481bp ; DIRECTION:0 ; CLONE... 23 4.5
GI3391524G gi3391524g LENGTH:959bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 4.5
GI14181523 gi14181523 LENGTH:1207bp ; DIRECTION:0 ; CLONE: n/a ;... 23 4.5
CL40CT56CN169 cl40ct56cn169 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS... 23 4.5
CL1341CT1444CN2236 cl1341ct1444cn2236 COVERAGE:0.99; CRAWID: 1; ... 23 4.5
MGNS010BH07F.B mgns010bH07f.b LENGTH:551bp ; DIRECTION:0 ; CLONE... 23 4.5
CL782CT871CN1645 cl782ct871cn1645 COVERAGE:1.0; CRAWID: 1; TOTAL... 23 4.5
CL40CT57CN172 cl40ct57cn172 COVERAGE:0.94; CRAWID: 1; TOTAL_ESTS... 23 4.5
MGNS010AB04F.B mgns010aB04f.b LENGTH:505bp ; DIRECTION:0 ; CLONE... 23 4.5
CL1099CT1202CN1989 cl1099ct1202cn1989 COVERAGE:0.99; CRAWID: 1; ... 23 4.5
CL123CT158CN459 cl123ct158cn459 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 6.1
CL181CT219CN572 cl181ct219cn572 COVERAGE:0.95; CRAWID: 1; TOTAL_... 23 6.1
MGCM008DD03F.B mgcm008dD03f.b LENGTH:509bp ; DIRECTION:0 ; CLONE... 23 6.1
MGNS007BA02F.B mgns007bA02f.b LENGTH:389bp ; DIRECTION:0 ; CLONE... 23 6.1
CL893CT992CN1770 cl893ct992cn1770 COVERAGE:0.99; CRAWID: 1; TOTA... 23 6.1
CL457CT528CN1186 cl457ct528cn1186 COVERAGE:0.99; CRAWID: 2; TOTA... 23 6.1
MGMY001BG01F.B mgmy001bG01f.b LENGTH:408bp ; DIRECTION:0 ; CLONE... 23 6.1
MGNS010CG10F.B mgns010cG10f.b LENGTH:386bp ; DIRECTION:0 ; CLONE... 23 6.1
MGCM001AF02F.B mgcm001aF02f.b LENGTH:387bp ; DIRECTION:0 ; CLONE... 23 6.1
MGCM006DH02F.B mgcm006dH02f.b LENGTH:532bp ; DIRECTION:0 ; CLONE... 23 6.1
CL50CT73CN265 cl50ct73cn265 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS... 23 6.1
MGCM012AF11F.B mgcm012aF11f.b LENGTH:381bp ; DIRECTION:0 ; CLONE... 23 6.1
MGCM001CA04F.B mgcm001cA04f.b LENGTH:381bp ; DIRECTION:0 ; CLONE... 23 6.1
CL189CT229CN604 cl189ct229cn604 COVERAGE:0.98; CRAWID: 1; TOTAL_... 22 8.4
CL975CT1076CN1857 cl975ct1076cn1857 COVERAGE:0.99; CRAWID: 1; TO... 22 8.4
CL1180CT1283CN2072 cl1180ct1283cn2072 COVERAGE:0.99; CRAWID: 1; ... 22 8.4
MGNS002AD06F.B mgns002aD06f.b LENGTH:434bp ; DIRECTION:0 ; CLONE... 22 8.4
CL805CT896CN1670 cl805ct896cn1670 COVERAGE:0.99; CRAWID: 1; TOTA... 22 8.4
CL1265CT1368CN2158 cl1265ct1368cn2158 COVERAGE:1.0; CRAWID: 1; T... 22 8.4
MGCS006AB04F.B mgcs006aB04f.b LENGTH:498bp ; DIRECTION:0 ; CLONE... 22 8.4
CL1289CT1392CN2183 cl1289ct1392cn2183 COVERAGE:0.98; CRAWID: 1; ... 22 8.4
GI14181227 gi14181227 LENGTH:665bp ; DIRECTION:0 ; CLONE: n/a ; ... 22 8.4
CL916CT1015CN1795 cl916ct1015cn1795 COVERAGE:1.0; CRAWID: 1; TOT... 22 8.4
MGCS011AA02F.B mgcs011aA02f.b LENGTH:528bp ; DIRECTION:0 ; CLONE... 22 8.4
MGCM008AG01F.B mgcm008aG01f.b LENGTH:398bp ; DIRECTION:0 ; CLONE... 22 8.4
MGCM003AC04F.B mgcm003aC04f.b LENGTH:404bp ; DIRECTION:0 ; CLONE... 22 8.4
GI14181139 gi14181139 LENGTH:1324bp ; DIRECTION:0 ; CLONE: n/a ;... 22 8.4
MGMY002DB02F.B mgmy002dB02f.b LENGTH:381bp ; DIRECTION:0 ; CLONE... 22 8.4
MGCM004BB12F.B mgcm004bB12f.b LENGTH:409bp ; DIRECTION:0 ; CLONE... 22 8.4
GI3392219G gi3392219g LENGTH:826bp ; DIRECTION:0 ; CLONE: n/a ; ... 22 8.4
>CL1317CT1420CN2212 cl1317ct1420cn2212 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:16; ESTS:mgns004aB07f.b,
Length = 638
Score = 29.9 bits (59), Expect = 0.038
Identities = 11/17 (64%), Positives = 13/17 (75%)
Frame = -2 / +3
Query: 58 PSFPTS*QKLLPSPRTH 8
PSFPTS + PSP+TH
Sbjct: 42 PSFPTSRTRF*PSPKTH 92
>MGCM007BD08F.B mgcm007bD08f.b LENGTH:511bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 511
Score = 29.5 bits (58), Expect = 0.052
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 82 LPCVESCMPSFPTS*QKLLPSP 17
LPC +S +PS P Q L+P+P
Sbjct: 80 LPCPKSIVPSQPKQKQALMPNP 15
>CL39CT45CN154 cl39ct45cn154 COVERAGE:0.98; CRAWID: 2;
TOTAL_ESTS:18; ESTS:gi14181521,mgmy001bG
Length = 1535
Score = 27.2 bits (53), Expect = 0.26
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 203 TNTRLPPSFLFKTRRRPTSR 144
+ +R S+LF TRRRPT R
Sbjct: 559 SRSRFLASWLFLTRRRPTGR 618
>CL964CT1064CN1845 cl964ct1064cn1845 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm001aF10f.b,mg
Length = 405
Score = 26.7 bits (52), Expect = 0.35
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2 / +2
Query: 235 SLPTSF*LQSRQIHVSPRASFSRLG 161
SLP+SF +QSR+ H + R S G
Sbjct: 176 SLPSSFSVQSRKYHPTRRRDASPFG 250
>CL848CT944CN1719 cl848ct944cn1719 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:5; ESTS:mgmy003aG04f.b,mgc
Length = 541
Score = 26.3 bits (51), Expect = 0.48
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -2 / +1
Query: 112 YIATLTTKETLPCVESCMPSFPTS*QKLLPSPRTHPR 2
Y +T ++ C+ + P P S +++P P HP+
Sbjct: 106 YPSTNQILQSTACLTTKHPRTPRSLPRMMPHPSCHPQ 216
>GI14180544 gi14180544 LENGTH:647bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 647
Score = 26.3 bits (51), Expect = 0.48
Identities = 10/35 (28%), Positives = 19/35 (53%)
Frame = -1 / -1
Query: 215 TTKSTNTRLPPSFLFKTRRRPTSR**CHLLFPKDI 111
TT +T R+PP+F+ ++ P * + P ++
Sbjct: 617 TTAATTARMPPAFMTRSAAAPVCEG*AAVELPVEL 513
>MGMY005BC06F.B mgmy005bC06f.b LENGTH:253bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 253
Score = 26.3 bits (51), Expect = 0.48
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 185 PSFLFKTRRRP 153
PSFLF TR RP
Sbjct: 146 PSFLFTTRPRP 114
>CL198CT238CN617 cl198ct238cn617 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181181,mgap008cC
Length = 834
Score = 25.3 bits (49), Expect = 0.91
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2 / +3
Query: 70 ESCMPSFPTS*QKLLPSPRTH 8
++ PS P + LLPS H
Sbjct: 672 QAAQPSMPANPSTLLPSQHLH 734
>MGAP007AC11F.B mgap007aC11f.b LENGTH:390bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 390
Score = 25.3 bits (49), Expect = 0.91
Identities = 10/36 (27%), Positives = 18/36 (49%)
Frame = -2 / +3
Query: 112 YIATLTTKETLPCVESCMPSFPTS*QKLLPSPRTHP 5
Y A ++ + C+ +C+PS *++ P P P
Sbjct: 12 YTAAQVSQTLVNCLPACLPSLFAC*KRFPPPPFPGP 119
>CL850CT946CN1721 cl850ct946cn1721 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgmy003aH02f.b,mgc
Length = 531
Score = 24.9 bits (48), Expect = 1.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1 / +2
Query: 245 SSFKSPNFFLTTKSTNTRLPPS 180
+S P F L K NTRL PS
Sbjct: 434 TSNSHPYFSL*KKKKNTRLVPS 499
>MGCS010AG02F.B mgcs010aG02f.b LENGTH:473bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 473
Score = 24.9 bits (48), Expect = 1.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2 / +3
Query: 218 KRSWET*TKIYYVLC 262
K WE ++YY+LC
Sbjct: 333 KNGWELILRVYYLLC 377
>CL75CT106CN366 cl75ct106cn366 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:mgcs003bB09f.b; LENGT
Length = 391
Score = 24.4 bits (47), Expect = 1.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / +2
Query: 97 TTKETLPCVES 65
TT E LPC +S
Sbjct: 29 TTTEALPCQQS 61
>CL648CT729CN1495 cl648ct729cn1495 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:20; ESTS:gi2537266g,mgmy00
Length = 1058
Score = 24.4 bits (47), Expect = 1.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +1
Query: 101 SCDIYPLG 124
SCDIYPLG
Sbjct: 250 SCDIYPLG 273
>CL1166CT1269CN2058 cl1166ct1269cn2058 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm006aF03f.b,m
Length = 674
Score = 24.4 bits (47), Expect = 1.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 224 FFLTTKSTNTRLPPS 180
FFL K NTRL PS
Sbjct: 57 FFLEKKKKNTRLVPS 13
>CL624CT702CN1457 cl624ct702cn1457 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:9; ESTS:gi3391393g,mgmy003
Length = 1457
Score = 24.0 bits (46), Expect = 2.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2 / +2
Query: 94 TKETLPCVESCMPSFPTS*QKLLPSPRTHPR 2
TK+ C+P+ T +L P+P+ H R
Sbjct: 119 TKQANKQSPQCLPNPRTRLTRLRPNPKPHTR 211
Score = 22.6 bits (43), Expect = 6.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1 / +2
Query: 236 KSPNFFLTTKSTNTRLPPSFLFKTRRRPTS 147
+SP ++ TRL P+ TRR+P+S
Sbjct: 137 QSPQCLPNPRTRLTRLRPNPKPHTRRKPSS 226
>GI14180764 gi14180764 LENGTH:642bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 642
Score = 24.0 bits (46), Expect = 2.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1 / -2
Query: 1 HEDEYEDWEGVF 36
H D + DWEG F
Sbjct: 38 HNDRWADWEGRF 3
>MGCS003CA06F.B mgcs003cA06f.b LENGTH:343bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 343
Score = 24.0 bits (46), Expect = 2.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / +3
Query: 55 SFPTS*QKLLPSPRTHPR 2
SFPTS + SP HP+
Sbjct: 240 SFPTSLNTIESSPAAHPK 293
>CL900CT999CN1778 cl900ct999cn1778 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy004cG10f.b,mgm
Length = 545
Score = 24.0 bits (46), Expect = 2.4
Identities = 9/16 (56%), Positives = 12/16 (74%)
Frame = -2 / +3
Query: 193 VSPRASFSRLGGDQPL 146
+SPR+S L GD+PL
Sbjct: 291 LSPRSSGGSLAGDRPL 338
>CL37CT43CN151 cl37ct43cn151 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:21; ESTS:gi14181525,gi1418131
Length = 1180
Score = 24.0 bits (46), Expect = 2.4
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = +3 / +1
Query: 117 LWEEKVTSLARGWSPPSLEKEARGETCICR 206
+W+ ++T R W+ +L++++ E R
Sbjct: 466 MWQPRLTRSPRSWALEALKRQSNWEALSSR 555
>CL1302CT1405CN2196 cl1302ct1405cn2196 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgns002bF03f.b,m
Length = 1180
Score = 24.0 bits (46), Expect = 2.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1 / +3
Query: 254 HSKSSFKSPNFFLTTKSTNTRLPPSFLFK 168
+S S P+ T++S +T PP F+
Sbjct: 813 NSAPSSSCPSTSFTSRSASTSSPPCMPFR 899
>CL245CT288CN705 cl245ct288cn705 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi14181058,gi339155
Length = 1340
Score = 23.5 bits (45), Expect = 3.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1 / +2
Query: 203 TNTRLPPSFLFKTRRRPTSR 144
TNTR P F T RRP R
Sbjct: 35 TNTRQQPWFAPHTPRRPRCR 94
Score = 22.1 bits (42), Expect = 8.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / +2
Query: 191 LPPSFLFKTRRRPTS 147
LP SFL TRR P++
Sbjct: 323 LPVSFLPSTRRTPSA 367
>CL54CT79CN277 cl54ct79cn277 COVERAGE:0.97; CRAWID: 2;
TOTAL_ESTS:11; ESTS:gi14181493,gi1418104
Length = 1125
Score = 23.5 bits (45), Expect = 3.2
Identities = 9/22 (40%), Positives = 13/22 (58%)
Frame = -1 / +2
Query: 209 KSTNTRLPPSFLFKTRRRPTSR 144
++ + PPS TR RP+SR
Sbjct: 386 RAQTSTCPPSVTTATRSRPSSR 451
>MGCS003CE06F.B mgcs003cE06f.b LENGTH:297bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 297
Score = 23.5 bits (45), Expect = 3.2
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3 / -1
Query: 138 MSPSLPKGYISQLLLQRRRCPA*NHACQVSQQANKNSFPVL 16
M S+PK + +L + C N Q+ N ++FPV+
Sbjct: 237 MPCSVPKTQLLKLH*KAGTCSVHNQPTWCRQKNNSHTFPVI 115
>MGAP008CD05F.B mgap008cD05f.b LENGTH:328bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 328
Score = 23.5 bits (45), Expect = 3.2
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = +3 / -3
Query: 138 SLARGWSPPSLEKEARGETCICRLC 212
S R W PP + C CR C
Sbjct: 230 SRRRPWRPPQPGGLCGSDLCPCRAC 156
>CL145CT182CN503 cl145ct182cn503 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181320,mgcm001a
Length = 605
Score = 23.5 bits (45), Expect = 3.2
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1 / +3
Query: 230 PNFFLTTKSTNTRLPPSFLFKTRRRPTS 147
P+ + S +PP+ T RRP S
Sbjct: 309 PSCIINAASAGVAIPPAAKLTTGRRPKS 392
>CL1327CT1430CN2222 cl1327ct1430cn2222 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007aH03f.b,m
Length = 849
Score = 23.5 bits (45), Expect = 3.2
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 263 NKVHSKSSFKS 231
N++H K S+KS
Sbjct: 294 NRIHCKRSYKS 262
>MGCS009AG04F.B mgcs009aG04f.b LENGTH:519bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 519
Score = 23.1 bits (44), Expect = 4.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2 / -1
Query: 35 LLACWETW 58
LLACW+ W
Sbjct: 285 LLACWKNW 262
>MGCS008BD04F.B mgcs008bD04f.b LENGTH:296bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 296
Score = 23.1 bits (44), Expect = 4.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3 / -2
Query: 117 LWEEKVTSLARGWSPPSLEKEARGETCICRL 209
+W+++ +LA+ S R ET + RL
Sbjct: 235 IWKKERIALAKSSLESSSSAAWRAETSLQRL 143
>MGCM008BD01F.B mgcm008bD01f.b LENGTH:432bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 432
Score = 23.1 bits (44), Expect = 4.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2 / +2
Query: 61 MPSFPTS*QKLLPSPRTHP 5
+P+ P + PSPR+HP
Sbjct: 374 VPTTPKTCTSPTPSPRSHP 430
>MGNS007BH03F.B mgns007bH03f.b LENGTH:481bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 481
Score = 23.1 bits (44), Expect = 4.5
Identities = 7/20 (35%), Positives = 8/20 (40%)
Frame = +2 / +1
Query: 2 TRMSTRTGKEFLLACWETWH 61
T R+ CW TWH
Sbjct: 289 TSACVRSATRSTHTCWPTWH 348
>GI3391524G gi3391524g LENGTH:959bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 959
Score = 23.1 bits (44), Expect = 4.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1 / +1
Query: 221 FLTTKSTNTRLPPSFLFKTRRRPTSR 144
F TT+ PPS + RRP+SR
Sbjct: 19 FPTTRVATPAKPPSARSLSFRRPSSR 96
>GI14181523 gi14181523 LENGTH:1207bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1207
Score = 23.1 bits (44), Expect = 4.5
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = -2 / +2
Query: 28 LPSPRTHP 5
+PSPRTHP
Sbjct: 902 VPSPRTHP 925
>CL40CT56CN169 cl40ct56cn169 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:24; ESTS:gi14180935,mgcm004dC
Length = 1076
Score = 23.1 bits (44), Expect = 4.5
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = +2 / -1
Query: 44 CWETWH 61
CW TWH
Sbjct: 191 CWRTWH 174
>CL1341CT1444CN2236 cl1341ct1444cn2236 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns008bC05f.b,m
Length = 482
Score = 23.1 bits (44), Expect = 4.5
Identities = 9/22 (40%), Positives = 10/22 (44%)
Frame = -2 / +3
Query: 85 TLPCVESCMPSFPTS*QKLLPS 20
T P + PS PTS PS
Sbjct: 132 TSPAMSGTCPSLPTSTTASRPS 197
>MGNS010BH07F.B mgns010bH07f.b LENGTH:551bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 551
Score = 23.1 bits (44), Expect = 4.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3 / -2
Query: 165 SLEKEARGETCICRLCS 215
SL + + +C+CR CS
Sbjct: 106 SLLSQRKQRSCLCRQCS 56
>CL782CT871CN1645 cl782ct871cn1645 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy001dE10f.b,mgmy
Length = 357
Score = 23.1 bits (44), Expect = 4.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3 / +3
Query: 144 ARGWSPPSLEKEARGETC 197
A+ W PPSL+ R C
Sbjct: 294 AQRWIPPSLQHSTRNLHC 347
>CL40CT57CN172 cl40ct57cn172 COVERAGE:0.94; CRAWID: 1;
TOTAL_ESTS:32; ESTS:mgcm001aF12f.b,mgcm0
Length = 651
Score = 23.1 bits (44), Expect = 4.5
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = +2 / -2
Query: 44 CWETWH 61
CW TWH
Sbjct: 146 CWRTWH 129
>MGNS010AB04F.B mgns010aB04f.b LENGTH:505bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 505
Score = 23.1 bits (44), Expect = 4.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3 / -3
Query: 231 SQLLFNYKVDKYTSPPELPFQDSEETNLSLVM 136
S L F ++ TSP PF D +++ +L++
Sbjct: 185 STLKFLQNQNRATSPGWTPFHDQQQSGETLLI 90
>CL1099CT1202CN1989 cl1099ct1202cn1989 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm004aG10f.b,m
Length = 426
Score = 23.1 bits (44), Expect = 4.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3 / -2
Query: 177 PFQDSEETNLSLVMSPSLPKGYISQL 100
PF DSE + + PSLP+ Y + L
Sbjct: 182 PFLDSEPSMTPDSL*PSLPEEYRTSL 105
>CL123CT158CN459 cl123ct158cn459 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:8; ESTS:gi14181360,gi141808
Length = 1807
Score = 22.6 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 215 TTKSTNTRLPPSFLFKTRRRPTS 147
TT+ + LPP+ TR RP++
Sbjct: 1039 TTRISAILLPPTSTVATRMRPST 1107
>CL181CT219CN572 cl181ct219cn572 COVERAGE:0.95; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi14181231,gi141805
Length = 1585
Score = 22.6 bits (43), Expect = 6.1
Identities = 8/23 (34%), Positives = 13/23 (55%)
Frame = +3 / +1
Query: 129 KVTSLARGWSPPSLEKEARGETC 197
++ +AR W PP+ K +R C
Sbjct: 706 RLQQIARVWFPPNTTKLSRKLLC 774
>MGCM008DD03F.B mgcm008dD03f.b LENGTH:509bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 509
Score = 22.6 bits (43), Expect = 6.1
Identities = 10/22 (45%), Positives = 15/22 (67%)
Frame = +3 / +3
Query: 192 TCICRLCS*KEVGRLKRRFTMY 257
T C+L +*KEV +L++ T Y
Sbjct: 123 THTCQLLN*KEVTKLEQAETTY 188
>MGNS007BA02F.B mgns007bA02f.b LENGTH:389bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 389
Score = 22.6 bits (43), Expect = 6.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 201 CRLCS*KEVGRLKRRFT 251
CR+C ++ G KRRF+
Sbjct: 218 CRICWHQDCGWRKRRFS 268
>CL893CT992CN1770 cl893ct992cn1770 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy004aF11f.b,mgn
Length = 502
Score = 22.6 bits (43), Expect = 6.1
Identities = 9/17 (52%), Positives = 12/17 (69%)
Frame = -2 / +1
Query: 61 MPSFPTS*QKLLPSPRT 11
+PS PT+* +L P P T
Sbjct: 259 LPSPPTA*SRLPPMPAT 309
>CL457CT528CN1186 cl457ct528cn1186 COVERAGE:0.99; CRAWID: 2;
TOTAL_ESTS:3; ESTS:gi3391409g,mgmy003
Length = 1057
Score = 22.6 bits (43), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3 / +2
Query: 153 WSPPSLEKEARGETCIC 203
W+PP+ ARG+ C
Sbjct: 56 WNPPACRNSARGKLHGC 106
>MGMY001BG01F.B mgmy001bG01f.b LENGTH:408bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 408
Score = 22.6 bits (43), Expect = 6.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 197 TRLPPSFLFKTRRR 156
TR PP F+T++R
Sbjct: 181 TRCPPQLQFRTKKR 222
>MGNS010CG10F.B mgns010cG10f.b LENGTH:386bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 386
Score = 22.6 bits (43), Expect = 6.1
Identities = 10/22 (45%), Positives = 11/22 (49%)
Frame = -2 / -3
Query: 67 SCMPSFPTS*QKLLPSPRTHPR 2
SC+ P S LP R HPR
Sbjct: 189 SCLLDLPESPVASLP*SRLHPR 124
>MGCM001AF02F.B mgcm001aF02f.b LENGTH:387bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 387
Score = 22.6 bits (43), Expect = 6.1
Identities = 10/36 (27%), Positives = 18/36 (49%)
Frame = -1 / +1
Query: 257 VHSKSSFKSPNFFLTTKSTNTRLPPSFLFKTRRRPT 150
+HSK + + +F + N P+FL ++PT
Sbjct: 97 LHSKPTLEDLSFRTSITQRNLEDRPNFLMHPIQQPT 204
>MGCM006DH02F.B mgcm006dH02f.b LENGTH:532bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 532
Score = 22.6 bits (43), Expect = 6.1
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = -1 / +1
Query: 221 FLTTKSTNTRLPPSFLFKTRR 159
FLT+ TRLPP + RR
Sbjct: 13 FLTSSLI*TRLPPLIVMLLRR 75
>CL50CT73CN265 cl50ct73cn265 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:gi14181499,mgcs008aG0
Length = 780
Score = 22.6 bits (43), Expect = 6.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2 / -2
Query: 97 TTKETLPCVESCMPSF 50
T+ L CV CMP F
Sbjct: 266 TSSFRLVCVSDCMPPF 219
>MGCM012AF11F.B mgcm012aF11f.b LENGTH:381bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 381
Score = 22.6 bits (43), Expect = 6.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / +2
Query: 77 LRRIMHAKFP 48
LRR HAKFP
Sbjct: 62 LRRFRHAKFP 91
>MGCM001CA04F.B mgcm001cA04f.b LENGTH:381bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 381
Score = 22.6 bits (43), Expect = 6.1
Identities = 10/32 (31%), Positives = 16/32 (49%)
Frame = -3 / +2
Query: 192 SPPELPFQDSEETNLSLVMSPSLPKGYISQLL 97
+PP P + +L L++ P L K + LL
Sbjct: 176 TPPRPPRPPARPASLPLLLPPRLLKVFPRPLL 271
>CL189CT229CN604 cl189ct229cn604 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi14181202,gi339153
Length = 966
Score = 22.1 bits (42), Expect = 8.4
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = -1 / +3
Query: 248 KSSFKSPNFFLTTKSTNT 195
K+ FK P FF+T + T
Sbjct: 93 KTYFK*PTFFITNRHCRT 146
>CL975CT1076CN1857 cl975ct1076cn1857 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgcm001bE08f.b,mg
Length = 508
Score = 22.1 bits (42), Expect = 8.4
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = -3 / -3
Query: 129 SLPKGYISQLLLQRRRCPA*N 67
S P G + L+L RCP N
Sbjct: 386 SAPSGTLPSLVLPECRCPMPN 324
>CL1180CT1283CN2072 cl1180ct1283cn2072 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm006dC06f.b,m
Length = 482
Score = 22.1 bits (42), Expect = 8.4
Identities = 10/28 (35%), Positives = 13/28 (45%)
Frame = +3 / -3
Query: 156 SPPSLEKEARGETCICRLCS*KEVGRLK 239
+P S R +C C C EVG L+
Sbjct: 405 APASAACCGRSVSCCCWPCCVSEVGELR 322
>MGNS002AD06F.B mgns002aD06f.b LENGTH:434bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 434
Score = 22.1 bits (42), Expect = 8.4
Identities = 8/24 (33%), Positives = 12/24 (49%)
Frame = +3 / +2
Query: 123 EEKVTSLARGWSPPSLEKEARGET 194
E+ V+ L RGW ++ R T
Sbjct: 218 EDCVSFLGRGWGVLVIQLYGRRPT 289
>CL805CT896CN1670 cl805ct896cn1670 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy002aF07f.b,mgm
Length = 472
Score = 22.1 bits (42), Expect = 8.4
Identities = 10/21 (47%), Positives = 11/21 (51%)
Frame = -2 / +1
Query: 79 PCVESCMPSFPTS*QKLLPSP 17
PC SC PS T L+ SP
Sbjct: 220 PCFSSCYPSRAT*PMALVWSP 282
>CL1265CT1368CN2158 cl1265ct1368cn2158 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns001aD09f.b,mg
Length = 574
Score = 22.1 bits (42), Expect = 8.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +3 / -3
Query: 144 ARGWSPPSLEKEARGETCICRL 209
AR W P G C+ RL
Sbjct: 104 ARCWHNPPTVSILLGMDCLVRL 39
>MGCS006AB04F.B mgcs006aB04f.b LENGTH:498bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 498
Score = 22.1 bits (42), Expect = 8.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = +3 / -2
Query: 153 WSPPSLEKEARGETC 197
WSPP + G +C
Sbjct: 377 WSPPGAKGRRNGSSC 333
>CL1289CT1392CN2183 cl1289ct1392cn2183 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgns002aD09f.b,m
Length = 497
Score = 22.1 bits (42), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -1 / +1
Query: 209 KSTNTRLPPSFLFKTRRRPT 150
+S+ T PP + + R PT
Sbjct: 403 RSSETATPPLSMLQNRATPT 462
>GI14181227 gi14181227 LENGTH:665bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 665
Score = 22.1 bits (42), Expect = 8.4
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = -3 / +2
Query: 192 SPPELPFQDSEETNLSLVMSP 130
+PP LPF + LS SP
Sbjct: 464 TPPHLPFLSTSRPTLSPNTSP 526
>CL916CT1015CN1795 cl916ct1015cn1795 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy005bD04f.b,mgn
Length = 664
Score = 22.1 bits (42), Expect = 8.4
Identities = 10/18 (55%), Positives = 11/18 (60%)
Frame = +2 / +3
Query: 74 AGQRLLCSKSCDIYPLGR 127
A Q LLC S D YP+ R
Sbjct: 579 ASQGLLC*PSDDCYPVFR 632
>MGCS011AA02F.B mgcs011aA02f.b LENGTH:528bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 528
Score = 22.1 bits (42), Expect = 8.4
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = -2 / -2
Query: 55 SFPTS*QKLLPSPRT 11
S PT+ L PS RT
Sbjct: 485 SLPTALSPLSPSTRT 441
>MGCM008AG01F.B mgcm008aG01f.b LENGTH:398bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 398
Score = 22.1 bits (42), Expect = 8.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / +2
Query: 202 QIHVSPRASFSRLGGDQP 149
Q H+SP+ LGGD P
Sbjct: 149 QQHLSPQDIGVALGGDDP 202
>MGCM003AC04F.B mgcm003aC04f.b LENGTH:404bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 404
Score = 22.1 bits (42), Expect = 8.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2 / -1
Query: 61 MPSFPTS*QKLLPSPRTHPR 2
+PSF TS L PSP R
Sbjct: 395 LPSFSTSQPPLRPSPGARHR 336
>GI14181139 gi14181139 LENGTH:1324bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1324
Score = 22.1 bits (42), Expect = 8.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 189 PPELPFQDSEETNLSLVMSPS 127
PP P + + +LSL++SP+
Sbjct: 1307 PPRAPRRRAVRLSLSLLLSPA 1245
>MGMY002DB02F.B mgmy002dB02f.b LENGTH:381bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 381
Score = 22.1 bits (42), Expect = 8.4
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = -2 / -2
Query: 130 FSSQRIYIATLTTKETLPCVES 65
FSS+ + + ETLPC S
Sbjct: 290 FSSRFVRCCVFRSLETLPCESS 225
>MGCM004BB12F.B mgcm004bB12f.b LENGTH:409bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 409
Score = 22.1 bits (42), Expect = 8.4
Identities = 9/28 (32%), Positives = 14/28 (49%)
Frame = +3 / +2
Query: 96 VRVAIYILWEEKVTSLARGWSPPSLEKE 179
+R+ +YI+ + S WS PS E
Sbjct: 5 IRIPVYIIDRHRRLSSDSLWSNPSSRGE 88
>GI3392219G gi3392219g LENGTH:826bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 826
Score = 22.1 bits (42), Expect = 8.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3 / -2
Query: 123 EEKVTSLARGWSPPSLEKEARGETC 197
+E+ T S PSL ARG C
Sbjct: 297 QERTTQCVEDESVPSLHPLARGLDC 223
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
Posted date: Mar 22, 2002 5:31 PM
Number of letters in database: 2,543,711
Number of sequences in database: 4717
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1605904
Number of Sequences: 4717
Number of extensions: 19075
Number of successful extensions: 1080
Number of sequences better than 10.0: 98
length of query: 89
length of database: 847,903
effective HSP length: 37
effective length of query: 52
effective length of database: 673,374
effective search space: 35015448
effective search space used: 35015448
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 42 (22.1 bits)