TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_Mgr_IFAFSGB_nr/FgrNCT3P_
1610_H11_O22ZT.seq
(324 letters)
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
4717 sequences; 2,543,711 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGNS013AB01F.B mgns013aB01f.b LENGTH:213bp ; DIRECTION:0 ; CLONE... 23 0.66
MGCS002DC02F.B mgcs002dC02f.b LENGTH:158bp ; DIRECTION:0 ; CLONE... 24 1.2
CL1373CT1476CN2270 cl1373ct1476cn2270 COVERAGE:1.0; CRAWID: 2; T... 25 1.2
GI3391434G gi3391434g LENGTH:970bp ; DIRECTION:0 ; CLONE: n/a ; ... 25 1.2
CL808CT899CN1673 cl808ct899cn1673 COVERAGE:0.96; CRAWID: 1; TOTA... 25 1.2
MGCS010BF11F.B mgcs010bF11f.b LENGTH:354bp ; DIRECTION:0 ; CLONE... 25 1.7
CL1360CT1463CN2255 cl1360ct1463cn2255 COVERAGE:0.99; CRAWID: 1; ... 25 1.7
MGCS002BH08F.B mgcs002bH08f.b LENGTH:433bp ; DIRECTION:0 ; CLONE... 24 2.3
CL940CT1039CN1819 cl940ct1039cn1819 COVERAGE:1.0; CRAWID: 1; TOT... 24 2.3
GI14180906 gi14180906 LENGTH:650bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 2.3
GI14180636 gi14180636 LENGTH:651bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 2.3
GI14181302 gi14181302 LENGTH:670bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 2.3
GI3391625G gi3391625g LENGTH:1010bp ; DIRECTION:0 ; CLONE: n/a ;... 24 3.2
CL99CT132CN410 cl99ct132cn410 COVERAGE:0.99; CRAWID: 1; TOTAL_ES... 24 3.2
CL484CT558CN1241 cl484ct558cn1241 COVERAGE:0.97; CRAWID: 1; TOTA... 24 3.2
MGMY003AH05F.B mgmy003aH05f.b LENGTH:441bp ; DIRECTION:0 ; CLONE... 24 3.2
CL434CT504CN1140 cl434ct504cn1140 COVERAGE:1.0; CRAWID: 1; TOTAL... 24 3.2
CL397CT463CN1027 cl397ct463cn1027 COVERAGE:0.96; CRAWID: 1; TOTA... 21 3.3
CL887CT986CN1761 cl887ct986cn1761 COVERAGE:0.99; CRAWID: 1; TOTA... 22 4.3
CL79CT112CN375 cl79ct112cn375 COVERAGE:0.99; CRAWID: 1; TOTAL_ES... 24 4.4
MGCM001CB04F.B mgcm001cB04f.b LENGTH:433bp ; DIRECTION:0 ; CLONE... 24 4.4
MGCS004BA09F.B mgcs004bA09f.b LENGTH:306bp ; DIRECTION:0 ; CLONE... 24 4.4
CL632CT710CN1474 cl632ct710cn1474 COVERAGE:0.99; CRAWID: 1; TOTA... 24 4.4
MGCS010BF01F.B mgcs010bF01f.b LENGTH:290bp ; DIRECTION:0 ; CLONE... 24 4.4
MGCM004BA04F.B mgcm004bA04f.b LENGTH:187bp ; DIRECTION:0 ; CLONE... 24 4.4
MGNS010CG10F.B mgns010cG10f.b LENGTH:386bp ; DIRECTION:0 ; CLONE... 24 4.4
MGNS008BG03F.B mgns008bG03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE... 24 4.4
MGNS002CB12F.B mgns002cB12f.b LENGTH:283bp ; DIRECTION:0 ; CLONE... 24 4.4
MGMY002DB02F.B mgmy002dB02f.b LENGTH:381bp ; DIRECTION:0 ; CLONE... 24 4.4
MGCS010BB07F.B mgcs010bB07f.b LENGTH:161bp ; DIRECTION:0 ; CLONE... 24 4.4
GI3391413G gi3391413g LENGTH:898bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 4.4
MGNS001BF09F.B mgns001bF09f.b LENGTH:523bp ; DIRECTION:0 ; CLONE... 24 4.4
CL840CT936CN1711 cl840ct936cn1711 COVERAGE:0.99; CRAWID: 1; TOTA... 24 4.4
CL535CT609CN1332 cl535ct609cn1332 COVERAGE:0.97; CRAWID: 1; TOTA... 24 4.4
MGAP008BE05F.B mgap008bE05f.b LENGTH:455bp ; DIRECTION:0 ; CLONE... 23 6.0
CL1413CT1516CN2312 cl1413ct1516cn2312 COVERAGE:0.98; CRAWID: 1; ... 23 6.0
MGCS003CC06F.B mgcs003cC06f.b LENGTH:346bp ; DIRECTION:0 ; CLONE... 23 6.0
MGCM010DE06F.B mgcm010dE06f.b LENGTH:378bp ; DIRECTION:0 ; CLONE... 23 6.0
GI2537311G gi2537311g LENGTH:552bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 6.0
MGCS002DC03F.B mgcs002dC03f.b LENGTH:321bp ; DIRECTION:0 ; CLONE... 23 6.0
GI14180620 gi14180620 LENGTH:417bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 6.0
CL237CT280CN691 cl237ct280cn691 COVERAGE:1.0; CRAWID: 1; TOTAL_E... 23 6.0
MGCS009BE12F.B mgcs009bE12f.b LENGTH:325bp ; DIRECTION:0 ; CLONE... 23 8.3
MGCS006DC08F.B mgcs006dC08f.b LENGTH:478bp ; DIRECTION:0 ; CLONE... 23 8.3
CL350CT409CN895 cl350ct409cn895 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 8.3
CL1215CT1318CN2108 cl1215ct1318cn2108 COVERAGE:0.99; CRAWID: 1; ... 23 8.3
GI14180826 gi14180826 LENGTH:706bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.3
GI14180791 gi14180791 LENGTH:706bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.3
CL106CT139CN421 cl106ct139cn421 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 8.3
GI14180710 gi14180710 LENGTH:652bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.3
CL23CT29CN108 cl23ct29cn108 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS... 23 8.3
CL661CT744CN1511 cl661ct744cn1511 COVERAGE:0.98; CRAWID: 1; TOTA... 23 8.3
CL165CT202CN538 cl165ct202cn538 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 8.3
MGMY003DH06F.B mgmy003dH06f.b LENGTH:399bp ; DIRECTION:0 ; CLONE... 23 8.3
CL858CT956CN1731 cl858ct956cn1731 COVERAGE:0.99; CRAWID: 1; TOTA... 23 8.3
MGMY006AA05F.B mgmy006aA05f.b LENGTH:384bp ; DIRECTION:0 ; CLONE... 23 8.3
MGCS001DB09F.B mgcs001dB09f.b LENGTH:391bp ; DIRECTION:0 ; CLONE... 23 8.3
GI14180671 gi14180671 LENGTH:727bp ; DIRECTION:0 ; CLONE: n/a ; ... 23 8.3
CL744CT830CN1603 cl744ct830cn1603 COVERAGE:0.96; CRAWID: 1; TOTA... 23 8.3
CL923CT1022CN1802 cl923ct1022cn1802 COVERAGE:1.0; CRAWID: 1; TOT... 23 8.3
>MGNS013AB01F.B mgns013aB01f.b LENGTH:213bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 213
Score = 23.1 bits (44), Expect(2) = 0.66
Identities = 7/19 (36%), Positives = 13/19 (67%)
Frame = +1 / +3
Query: 175 YFFYFFLQRDMHCMQQELL 231
+FF+FF ++D+ Q+ L
Sbjct: 9 FFFFFFFKKDIWIENQKCL 65
Score = 20.3 bits (38), Expect(2) = 0.66
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 260 QNCIHSSIP 286
Q C+HS IP
Sbjct: 54 QKCLHSPIP 80
>MGCS002DC02F.B mgcs002dC02f.b LENGTH:158bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 158
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1 / +2
Query: 175 YFFYFFLQRDMHCMQQELLALLKGVQSIAK 264
+FF+FF Q M LL L K + K
Sbjct: 47 FFFFFFQQEHMTIKFSHLLILPKSENKLIK 136
Score = 17.6 bits (32), Expect(2) = 1.2
Identities = 4/10 (40%), Positives = 7/10 (70%)
Frame = +1 / +1
Query: 160 EHLQRYFFYF 189
E + +FF+F
Sbjct: 28 ELVSSFFFFF 57
>CL1373CT1476CN2270 cl1373ct1476cn2270 COVERAGE:1.0; CRAWID: 2;
TOTAL_ESTS:1; ESTS:mgcs004bH03f.b; L
Length = 516
Score = 25.3 bits (49), Expect = 1.2
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 160 EHLQRYFFYFFLQR 201
E + R+FF+FFLQ+
Sbjct: 15 ELVSRFFFFFFLQK 56
>GI3391434G gi3391434g LENGTH:970bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 970
Score = 25.3 bits (49), Expect = 1.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 145 MSYLSEHLQRYFFYFFLQRDM 207
++Y H YFF+FF Q+ +
Sbjct: 816 VNYKERHA*DYFFFFFFQQGL 754
>CL808CT899CN1673 cl808ct899cn1673 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgmy002aG12f.b,mgc
Length = 602
Score = 25.3 bits (49), Expect = 1.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 175 YFFYFFLQRDMH 210
+FF+FFL +D H
Sbjct: 599 FFFFFFLNKDSH 564
>MGCS010BF11F.B mgcs010bF11f.b LENGTH:354bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 354
Score = 24.9 bits (48), Expect = 1.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 175 YFFYFFLQRDMHCMQ 219
+FF+FFL C+Q
Sbjct: 352 FFFFFFLSSQQRCIQ 308
>CL1360CT1463CN2255 cl1360ct1463cn2255 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns011aH08f.b,m
Length = 539
Score = 24.9 bits (48), Expect = 1.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1 / -3
Query: 175 YFFYFFLQRDMHCMQQELLAL 237
+FF+FFL+ M C +L L
Sbjct: 537 FFFFFFLRAGMRCGLADLSIL 475
>MGCS002BH08F.B mgcs002bH08f.b LENGTH:433bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 433
Score = 24.4 bits (47), Expect = 2.3
Identities = 10/32 (31%), Positives = 17/32 (52%)
Frame = +1 / +3
Query: 160 EHLQRYFFYFFLQRDMHCMQQELLALLKGVQS 255
E + +FF+FF RD +++ L L+ S
Sbjct: 12 ELVSSFFFFFFCIRDQSTLEELLSHLMYSYDS 107
>CL940CT1039CN1819 cl940ct1039cn1819 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy006bG10f.b,mgm
Length = 532
Score = 24.4 bits (47), Expect = 2.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +3
Query: 139 PVMSYLSEHLQRYFFY 186
P+ +YLS H YFFY
Sbjct: 354 PLPNYLSFHPTPYFFY 401
>GI14180906 gi14180906 LENGTH:650bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 650
Score = 24.4 bits (47), Expect = 2.3
Identities = 9/34 (26%), Positives = 17/34 (49%)
Frame = +1 / +3
Query: 142 VMSYLSEHLQRYFFYFFLQRDMHCMQQELLALLK 243
++S+ +FF+FF Q+ + L A L+
Sbjct: 51 ILSFFPIFFHLFFFFFFFQKKTFFAKANLRATLR 152
>GI14180636 gi14180636 LENGTH:651bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 651
Score = 24.4 bits (47), Expect = 2.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / +1
Query: 61 FQIFYALCFDSLHRRRQDLI 2
F +FY+LCF +L R LI
Sbjct: 76 FNVFYSLCFVTLADRLIGLI 135
>GI14181302 gi14181302 LENGTH:670bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 670
Score = 24.4 bits (47), Expect = 2.3
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 6 RSWRRL*RLSKQR 44
RSWRR+ RLS+ R
Sbjct: 649 RSWRRMXRLSRPR 611
>GI3391625G gi3391625g LENGTH:1010bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1010
Score = 24.0 bits (46), Expect = 3.2
Identities = 8/24 (33%), Positives = 13/24 (53%)
Frame = -2 / +1
Query: 143 TGHLYRHPIPISDRLIPTWRAQVQ 72
T RHP P+S P+W+ + +
Sbjct: 217 TSRYPRHPEPVSHHPDPSWQRRAR 288
>CL99CT132CN410 cl99ct132cn410 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181404,mgcm005bE
Length = 956
Score = 24.0 bits (46), Expect = 3.2
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -2 / +3
Query: 101 LIPTWRAQVQLSWFPDL 51
LIP W AQ+ W P L
Sbjct: 855 LIPYWLAQIAPYWGPPL 905
>CL484CT558CN1241 cl484ct558cn1241 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:5; ESTS:mgmy001aA08f.b,mgc
Length = 1267
Score = 24.0 bits (46), Expect = 3.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 160 EHLQRYFFYFFLQR 201
E+ R FF+FFL+R
Sbjct: 1022 ENYSRVFFFFFLRR 981
>MGMY003AH05F.B mgmy003aH05f.b LENGTH:441bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 441
Score = 24.0 bits (46), Expect = 3.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 178 FFYFFLQRDMHCMQ 219
F+YFFL R +H Q
Sbjct: 399 FYYFFLIRHIHARQ 440
>CL434CT504CN1140 cl434ct504cn1140 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:gi14180334; LENGTH:
Length = 794
Score = 24.0 bits (46), Expect = 3.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2 / +2
Query: 137 HLYRHPIPISDRLIPTWRAQVQL 69
HL HP+ + R+ WR +QL
Sbjct: 368 HLTEHPLCNNIRVFRGWRCPLQL 436
>CL397CT463CN1027 cl397ct463cn1027 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:12; ESTS:gi14180504,mgmy00
Length = 746
Score = 21.2 bits (40), Expect(2) = 3.3
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1 / -1
Query: 139 PVMSYLSEHLQRYFFYF 189
PV S S +FF+F
Sbjct: 698 PVFSPFSRTSLEFFFFF 648
Score = 20.8 bits (39), Expect(2) = 3.3
Identities = 6/14 (42%), Positives = 9/14 (63%)
Frame = +1 / -2
Query: 175 YFFYFFLQRDMHCM 216
+FF+FFL C+
Sbjct: 658 FFFFFFLGTKKSCL 617
>CL887CT986CN1761 cl887ct986cn1761 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy004aA12f.b,mgn
Length = 810
Score = 22.1 bits (42), Expect(2) = 4.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 175 YFFYFFLQRD 204
+FF+FF QR+
Sbjct: 221 FFFFFFFQRE 192
Score = 19.4 bits (36), Expect(2) = 4.3
Identities = 7/24 (29%), Positives = 12/24 (49%)
Frame = +1 / -2
Query: 121 G*RYR*PVMSYLSEHLQRYFFYFF 192
G R+ + + R+FF+FF
Sbjct: 278 GGRFEGELAGLIQRTSPRFFFFFF 207
>CL79CT112CN375 cl79ct112cn375 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:12; ESTS:gi14180729,gi141806
Length = 1279
Score = 23.5 bits (45), Expect = 4.4
Identities = 8/23 (34%), Positives = 16/23 (68%)
Frame = +3 / +1
Query: 90 SRYQSIRNWDGMTI*MTCYELPI 158
S ++S W+G+T ++C+ LP+
Sbjct: 637 SSHESNGLWEGLTPLVSCFCLPL 705
>MGCM001CB04F.B mgcm001cB04f.b LENGTH:433bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 433
Score = 23.5 bits (45), Expect = 4.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 160 EHLQRYFFYFF 192
E+L R FF+FF
Sbjct: 8 ENLSRVFFFFF 40
>MGCS004BA09F.B mgcs004bA09f.b LENGTH:306bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 306
Score = 23.5 bits (45), Expect = 4.4
Identities = 8/18 (44%), Positives = 13/18 (71%)
Frame = +1 / +2
Query: 166 LQRYFFYFFLQRDMHCMQ 219
L+ +FF+FFL + C+Q
Sbjct: 17 LEFFFFFFFLVARILCIQ 70
>CL632CT710CN1474 cl632ct710cn1474 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:gi2537313g,mgap010
Length = 617
Score = 23.5 bits (45), Expect = 4.4
Identities = 7/12 (58%), Positives = 9/12 (74%)
Frame = +1 / +1
Query: 175 YFFYFFLQRDMH 210
+FF+FF QR H
Sbjct: 10 FFFFFFFQRGPH 45
>MGCS010BF01F.B mgcs010bF01f.b LENGTH:290bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 290
Score = 23.5 bits (45), Expect = 4.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1 / -2
Query: 175 YFFYFFLQRDMHCMQQELLALLKGVQSIA 261
+FF+FFL R ++ L L Q +A
Sbjct: 286 FFFFFFLSRRIYSDNYVPLVLNSSTQIVA 200
>MGCM004BA04F.B mgcm004bA04f.b LENGTH:187bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 187
Score = 23.5 bits (45), Expect = 4.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 14 ATPVKAIKTKSIEDLETMRVEPEPAKS 94
ATP+ A + K++ED+++ +P S
Sbjct: 33 ATPIAAQEVKALEDVQSPFYLAQPVAS 113
>MGNS010CG10F.B mgns010cG10f.b LENGTH:386bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 386
Score = 23.5 bits (45), Expect = 4.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 322 CSTRIICIMYR 290
C TR+IC+M R
Sbjct: 313 CPTRVICVMAR 281
>MGNS008BG03F.B mgns008bG03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 395
Score = 23.5 bits (45), Expect = 4.4
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 151 YLSEHLQRYFFYFFLQR 201
+++E ++ +FF+FFL+R
Sbjct: 77 HVAEVMR*FFFFFFLRR 27
>MGNS002CB12F.B mgns002cB12f.b LENGTH:283bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 283
Score = 23.5 bits (45), Expect = 4.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2 / +1
Query: 125 HPIPISDRLIPTWR 84
HP P L PTWR
Sbjct: 100 HPSPYVPPLAPTWR 141
>MGMY002DB02F.B mgmy002dB02f.b LENGTH:381bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 381
Score = 23.5 bits (45), Expect = 4.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 178 FFYFFLQRDMHCMQQEL 228
FF+F + D+H +Q+L
Sbjct: 46 FFFFLKKNDLHFFRQKL 96
>MGCS010BB07F.B mgcs010bB07f.b LENGTH:161bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 161
Score = 23.5 bits (45), Expect = 4.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 175 YFFYFFLQRD 204
+FF+FFL RD
Sbjct: 154 FFFFFFLSRD 125
>GI3391413G gi3391413g LENGTH:898bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 898
Score = 23.5 bits (45), Expect = 4.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2 / +3
Query: 134 LYRHPIPISDRLIPTWRAQVQLSWFPDLLCSL 39
L+RHP + + + L W P L CSL
Sbjct: 453 LFRHPFIYFSKST*SPQTYXPLFWSPYLRCSL 548
>MGNS001BF09F.B mgns001bF09f.b LENGTH:523bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 523
Score = 23.5 bits (45), Expect = 4.4
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = +1 / +1
Query: 160 EHLQRYFFYFFLQRDMHC 213
E+ + FF+FFL D C
Sbjct: 28 ENSXQXFFFFFLDSDRGC 81
>CL840CT936CN1711 cl840ct936cn1711 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:11; ESTS:mgmy003aB07f.b,mg
Length = 916
Score = 23.5 bits (45), Expect = 4.4
Identities = 9/22 (40%), Positives = 13/22 (58%)
Frame = +3 / -3
Query: 57 WKP*ELNLSPPSRYQSIRNWDG 122
W P +LSP ++ S R W+G
Sbjct: 551 WFPFFFSLSPSNQSSSGRPWEG 486
>CL535CT609CN1332 cl535ct609cn1332 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3391940g,mgns012
Length = 783
Score = 23.5 bits (45), Expect = 4.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2 / -1
Query: 125 HPIPISDRLIPTWRAQVQLSW 63
HP P DR++ + + ++ SW
Sbjct: 522 HPNPRXDRMVESXASTLKASW 460
>MGAP008BE05F.B mgap008bE05f.b LENGTH:455bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 455
Score = 23.1 bits (44), Expect = 6.0
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +1 / -3
Query: 187 FFLQRDMHCMQQELLAL 237
FFL RD C +ELL L
Sbjct: 285 FFLARDGGCEAKELLQL 235
>CL1413CT1516CN2312 cl1413ct1516cn2312 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgcs004bA05f.b,m
Length = 662
Score = 23.1 bits (44), Expect = 6.0
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = +1 / -1
Query: 175 YFFYFFLQRDMH 210
+FF+FFL+R+++
Sbjct: 662 FFFFFFLRRNVY 627
>MGCS003CC06F.B mgcs003cC06f.b LENGTH:346bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 346
Score = 23.1 bits (44), Expect = 6.0
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1 / +3
Query: 160 EHLQRYFFYFFLQRDMHCMQQELLALLKGVQSIAKL 267
E + +FF+FF + + CM + ++G + + +L
Sbjct: 30 ELVSSFFFFFFF*QKLGCMTCTIDVHVQGFKPMHRL 137
>MGCM010DE06F.B mgcm010dE06f.b LENGTH:378bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 378
Score = 23.1 bits (44), Expect = 6.0
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = -2 / -2
Query: 128 RHPIPISDRLIPTWRAQVQLSWFP 57
RHP P P W + + W P
Sbjct: 215 RHPSPCISHRRPPWPTRA*IRWPP 144
>GI2537311G gi2537311g LENGTH:552bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 552
Score = 23.1 bits (44), Expect = 6.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 175 YFFYFFLQRDMH 210
+FF+FF R +H
Sbjct: 542 FFFFFFFSRSIH 507
>MGCS002DC03F.B mgcs002dC03f.b LENGTH:321bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 321
Score = 23.1 bits (44), Expect = 6.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2 / +3
Query: 92 TWRAQVQLSWFPDLLCS 42
T R + L+W+P L C+
Sbjct: 99 TQRDTIPLNWYPFLFCN 149
>GI14180620 gi14180620 LENGTH:417bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 417
Score = 23.1 bits (44), Expect = 6.0
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 166 LQRYFFYFFL 195
L+R+FF+FFL
Sbjct: 228 LRRFFFFFFL 257
>CL237CT280CN691 cl237ct280cn691 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181083,mgmy005dC
Length = 770
Score = 23.1 bits (44), Expect = 6.0
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1 / +2
Query: 175 YFFYFFLQRDMHCMQQ 222
+FF+FF HC+++
Sbjct: 575 FFFFFFF*HARHCIRE 622
>MGCS009BE12F.B mgcs009bE12f.b LENGTH:325bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 325
Score = 22.6 bits (43), Expect = 8.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / -1
Query: 166 LQRYFFYFFLQRDM 207
L +FF+FF R+M
Sbjct: 97 LPSFFFFFFFPREM 56
>MGCS006DC08F.B mgcs006dC08f.b LENGTH:478bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 478
Score = 22.6 bits (43), Expect = 8.3
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 166 LQRYFFYFFLQRDMHCM 216
L+ +FF+F+L++ ++ M
Sbjct: 44 LEFFFFFFYLEKQLY*M 94
>CL350CT409CN895 cl350ct409cn895 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi14180716,mgap007a
Length = 665
Score = 22.6 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = +3 / +3
Query: 258 CKTVSTAVFQIR 293
CK VS +VFQ+R
Sbjct: 429 CKQVSRSVFQLR 464
>CL1215CT1318CN2108 cl1215ct1318cn2108 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm008dF07f.b,m
Length = 785
Score = 22.6 bits (43), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / -1
Query: 321 VQLVLFVSCIVSGILLWIQF 262
V L LFV C+V +L I F
Sbjct: 479 VDLELFVKCVVPKVLHVIPF 420
>GI14180826 gi14180826 LENGTH:706bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 706
Score = 22.6 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = -1 / +3
Query: 282 ILLWIQFCNTLN 247
ILLW CNTL+
Sbjct: 315 ILLWSVVCNTLS 350
>GI14180791 gi14180791 LENGTH:706bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 706
Score = 22.6 bits (43), Expect = 8.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3 / -3
Query: 213 YAAGVISIVKRRSEYCKTVSTAVFQIRYMIQIIRVE 320
YAAG+ISI+ +S A+ IR + +R +
Sbjct: 335 YAAGMISIISSLGNLSVGMSIALQCIR*AYRTLRTD 228
>CL106CT139CN421 cl106ct139cn421 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181392,gi339200
Length = 799
Score = 22.6 bits (43), Expect = 8.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1 / -2
Query: 93 DLAGSGSTLMVSRSSMLFVLIAFTGV 16
DL GSGS+ RSS ++ T V
Sbjct: 252 DLCGSGSSFEAMRSSSTLLVTPRTEV 175
>GI14180710 gi14180710 LENGTH:652bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 652
Score = 22.6 bits (43), Expect = 8.3
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1 / +1
Query: 37 NKEHRRSGN 63
+K HRR GN
Sbjct: 601 HKRHRRRGN 627
>CL23CT29CN108 cl23ct29cn108 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:2;
ESTS:gi14181557,gi3391478g
Length = 1268
Score = 22.6 bits (43), Expect = 8.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1 / -3
Query: 175 YFFYFFLQRDMHC 213
+FF+FF + HC
Sbjct: 975 FFFFFFYRPXRHC 937
>CL661CT744CN1511 cl661ct744cn1511 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgap007aC08f.b,mga
Length = 536
Score = 22.6 bits (43), Expect = 8.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1 / +3
Query: 172 RYFFYFFLQRDMHCMQQELL 231
R FF+FF R+M LL
Sbjct: 12 RVFFFFFFGRNMFDRDTFLL 71
>CL165CT202CN538 cl165ct202cn538 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181275,gi339157
Length = 1067
Score = 22.6 bits (43), Expect = 8.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1 / -2
Query: 175 YFFYFFLQRDMHCMQ 219
+FF+FF Q D + Q
Sbjct: 697 FFFFFFSQGDWYAFQ 653
>MGMY003DH06F.B mgmy003dH06f.b LENGTH:399bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 399
Score = 22.6 bits (43), Expect = 8.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / +2
Query: 62 TMRVEPEPAKSVSI 103
T+R P AKSVS+
Sbjct: 179 TVRYVPRLAKSVSV 220
>CL858CT956CN1731 cl858ct956cn1731 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:16; ESTS:mgns004aE08f.b,mg
Length = 439
Score = 22.6 bits (43), Expect = 8.3
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +1 / -2
Query: 175 YFFYFFLQRDMHC 213
+FF+FF+ R ++C
Sbjct: 438 FFFFFFMIRYVYC 400
>MGMY006AA05F.B mgmy006aA05f.b LENGTH:384bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 384
Score = 22.6 bits (43), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2 / +2
Query: 128 RHPIPISDRLIPTWRAQVQLS 66
RHP P L P+ R ++S
Sbjct: 269 RHPSPPPHPLAPSPRLPSRVS 331
>MGCS001DB09F.B mgcs001dB09f.b LENGTH:391bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 391
Score = 22.6 bits (43), Expect = 8.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2 / +1
Query: 266 CIHSSIPDTIHDTNNT 313
CI PDT H +NT
Sbjct: 7 CIFKHSPDTFHCLHNT 54
>GI14180671 gi14180671 LENGTH:727bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 727
Score = 22.6 bits (43), Expect = 8.3
Identities = 4/13 (30%), Positives = 8/13 (60%)
Frame = -3 / -1
Query: 322 CSTRIICIMYRIW 284
C R+ C++ +W
Sbjct: 157 CRRRVFCLLRGLW 119
>CL744CT830CN1603 cl744ct830cn1603 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:6; ESTS:mgmy001bD02f.b,mgm
Length = 821
Score = 22.6 bits (43), Expect = 8.3
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = +1 / -2
Query: 175 YFFYFFLQ 198
YFF+FFLQ
Sbjct: 748 YFFFFFLQ 725
>CL923CT1022CN1802 cl923ct1022cn1802 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy005cA01f.b,mgm
Length = 483
Score = 22.6 bits (43), Expect = 8.3
Identities = 6/7 (85%), Positives = 7/7 (99%)
Frame = -2 / -2
Query: 284 EYCCGYS 264
E+CCGYS
Sbjct: 482 EFCCGYS 462
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
Posted date: Mar 22, 2002 5:31 PM
Number of letters in database: 2,543,711
Number of sequences in database: 4717
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1865978
Number of Sequences: 4717
Number of extensions: 22646
Number of successful extensions: 1944
Number of sequences better than 10.0: 86
length of query: 108
length of database: 847,903
effective HSP length: 37
effective length of query: 70
effective length of database: 673,374
effective search space: 47136180
effective search space used: 47136180
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 43 (22.6 bits)