TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_Mgr_IFAFSGB_nr/FgrNCT3P_
1611_G03_N05ZT.seq
(458 letters)
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
4717 sequences; 2,543,711 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CL1294CT1397CN2188 cl1294ct1397cn2188 COVERAGE:0.99; CRAWID: 1; ... 117 5e-28
GI2537321G gi2537321g LENGTH:492bp ; DIRECTION:0 ; CLONE: n/a ; ... 33 0.009
CL245CT288CN705 cl245ct288cn705 COVERAGE:0.99; CRAWID: 1; TOTAL_... 32 0.019
CL936CT1035CN1815 cl936ct1035cn1815 COVERAGE:1.0; CRAWID: 1; TOT... 30 0.059
CL818CT912CN1686 cl818ct912cn1686 COVERAGE:0.96; CRAWID: 1; TOTA... 26 0.16
CL254CT300CN721 cl254ct300cn721 COVERAGE:0.99; CRAWID: 1; TOTAL_... 28 0.29
MGCS003BG02F.B mgcs003bG02f.b LENGTH:396bp ; DIRECTION:0 ; CLONE... 24 0.68
GI3391706G gi3391706g LENGTH:1027bp ; DIRECTION:0 ; CLONE: n/a ;... 27 0.75
GI14180582 gi14180582 LENGTH:655bp ; DIRECTION:0 ; CLONE: n/a ; ... 27 0.82
MGCS005DH01F.B mgcs005dH01f.b LENGTH:569bp ; DIRECTION:0 ; CLONE... 27 0.82
MGCM001BG04F.B mgcm001bG04f.b LENGTH:502bp ; DIRECTION:0 ; CLONE... 26 1.1
MGMY006BH12F.B mgmy006bH12f.b LENGTH:103bp ; DIRECTION:0 ; CLONE... 26 1.1
MGMY004AH12F.B mgmy004aH12f.b LENGTH:490bp ; DIRECTION:0 ; CLONE... 26 1.5
CL819CT913CN1687 cl819ct913cn1687 COVERAGE:0.99; CRAWID: 1; TOTA... 25 2.0
MGCS011DG05F.B mgcs011dG05f.b LENGTH:504bp ; DIRECTION:0 ; CLONE... 24 2.0
MGCM006DB08F.B mgcm006dB08f.b LENGTH:312bp ; DIRECTION:0 ; CLONE... 25 2.2
CL231CT274CN677 cl231ct274cn677 COVERAGE:0.99; CRAWID: 1; TOTAL_... 25 2.7
CL595CT670CN1419 cl595ct670cn1419 COVERAGE:1.0; CRAWID: 1; TOTAL... 25 2.7
CL595CT671CN1420 cl595ct671cn1420 COVERAGE:1.0; CRAWID: 1; TOTAL... 25 2.7
MGNS007DE07F.B mgns007dE07f.b LENGTH:264bp ; DIRECTION:0 ; CLONE... 25 2.7
CL485CT559CN1245 cl485ct559cn1245 COVERAGE:1.0; CRAWID: 1; TOTAL... 25 2.7
MGMY006DH07F.B mgmy006dH07f.b LENGTH:376bp ; DIRECTION:0 ; CLONE... 25 2.8
CL444CT514CN1163 cl444ct514cn1163 COVERAGE:0.92; CRAWID: 1; TOTA... 24 3.7
GI14180448 gi14180448 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 3.7
CL809CT900CN1674 cl809ct900cn1674 COVERAGE:0.98; CRAWID: 1; TOTA... 24 3.7
MGCS004CH12F.B mgcs004cH12f.b LENGTH:314bp ; DIRECTION:0 ; CLONE... 24 3.7
CL1140CT1243CN2032 cl1140ct1243cn2032 COVERAGE:0.99; CRAWID: 1; ... 24 3.7
CL1040CT1141CN1924 cl1040ct1141cn1924 COVERAGE:0.99; CRAWID: 1; ... 22 3.7
CL1260CT1363CN2153 cl1260ct1363cn2153 COVERAGE:0.97; CRAWID: 1; ... 24 4.1
CL857CT953CN1728 cl857ct953cn1728 COVERAGE:0.99; CRAWID: 1; TOTA... 24 4.2
MGCM008CE02F.B mgcm008cE02f.b LENGTH:489bp ; DIRECTION:0 ; CLONE... 24 4.2
GI14180141 gi14180141 LENGTH:695bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 5.1
CL574CT648CN1391 cl574ct648cn1391 COVERAGE:0.97; CRAWID: 1; TOTA... 24 5.1
CL983CT1084CN1866 cl983ct1084cn1866 COVERAGE:0.99; CRAWID: 1; TO... 24 5.1
GI14180597 gi14180597 LENGTH:1073bp ; DIRECTION:0 ; CLONE: n/a ;... 24 5.1
MGNS002AH08F.B mgns002aH08f.b LENGTH:498bp ; DIRECTION:0 ; CLONE... 24 5.1
MGNS013BF07F.B mgns013bF07f.b LENGTH:310bp ; DIRECTION:0 ; CLONE... 24 5.1
MGCM002AC06F.B mgcm002aC06f.b LENGTH:271bp ; DIRECTION:0 ; CLONE... 24 5.1
CL290CT342CN797 cl290ct342cn797 COVERAGE:0.97; CRAWID: 1; TOTAL_... 24 5.1
MGCS010BD08F.B mgcs010bD08f.b LENGTH:553bp ; DIRECTION:0 ; CLONE... 24 5.1
CL40CT63CN211 cl40ct63cn211 COVERAGE:0.98; CRAWID: 3; TOTAL_ESTS... 24 5.3
GI14181439 gi14181439 LENGTH:705bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 5.3
CL862CT960CN1735 cl862ct960cn1735 COVERAGE:0.99; CRAWID: 1; TOTA... 24 5.3
CL397CT463CN1027 cl397ct463cn1027 COVERAGE:0.96; CRAWID: 1; TOTA... 24 5.4
CL27CT33CN118 cl27ct33cn118 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:... 24 5.4
MGMY004AD04F.B mgmy004aD04f.b LENGTH:467bp ; DIRECTION:0 ; CLONE... 24 7.0
GI14180952 gi14180952 LENGTH:691bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 7.0
CL907CT1006CN1785 cl907ct1006cn1785 COVERAGE:0.98; CRAWID: 1; TO... 24 7.0
CL298CT350CN808 cl298ct350cn808 COVERAGE:0.97; CRAWID: 1; TOTAL_... 24 7.0
CL762CT851CN1625 cl762ct851cn1625 COVERAGE:0.99; CRAWID: 1; TOTA... 24 7.0
MGCS011BE03F.B mgcs011bE03f.b LENGTH:240bp ; DIRECTION:0 ; CLONE... 24 7.0
GI14181032 gi14181032 LENGTH:650bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 7.3
MGCM003CG01F.B mgcm003cG01f.b LENGTH:379bp ; DIRECTION:0 ; CLONE... 24 7.3
CL735CT821CN1594 cl735ct821cn1594 COVERAGE:0.99; CRAWID: 1; TOTA... 24 7.5
MGMY002DC05F.B mgmy002dC05f.b LENGTH:397bp ; DIRECTION:0 ; CLONE... 24 7.5
GI14180445 gi14180445 LENGTH:704bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 7.5
CL35CT41CN141 cl35ct41cn141 COVERAGE:1.0; CRAWID: 4; TOTAL_ESTS:... 24 7.7
CL40CT56CN169 cl40ct56cn169 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS... 23 9.6
CL1444CT1548CN2344 cl1444ct1548cn2344 COVERAGE:0.99; CRAWID: 1; ... 23 9.6
MGNS007BG04F.B mgns007bG04f.b LENGTH:485bp ; DIRECTION:0 ; CLONE... 23 9.6
MGCM012DE03F.B mgcm012dE03f.b LENGTH:240bp ; DIRECTION:0 ; CLONE... 23 9.6
MGAP008BB06F.B mgap008bB06f.b LENGTH:375bp ; DIRECTION:0 ; CLONE... 23 9.6
>CL1294CT1397CN2188 cl1294ct1397cn2188 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns002aG08f.b,m
Length = 593
Score = 117 bits (250), Expect = 5e-28
Identities = 49/86 (56%), Positives = 60/86 (68%)
Frame = +2 / +1
Query: 125 PDDSINRRIGLIRGDITELRIDAIVNAANKSLRGGSGVDGAIHSAAGPDLVKESGALGPI 304
P+ N RI L GDIT+L +DAIVNAAN++L GG GVDG+IH AAG L++E L
Sbjct: 319 PNKRFNDRIALYHGDITKLMVDAIVNAANETLLGGGGVDGSIHRAAGGGLLRECRTLDGC 498
Query: 305 DTGDAVITKGYKLPAKHVIHTVGPIF 382
DTGDA +T Y LP K VIH VGP++
Sbjct: 499 DTGDAKVTDAYDLPCKKVIHAVGPVY 576
Score = 50.5 bits (104), Expect = 5e-08
Identities = 35/79 (44%), Positives = 37/79 (46%)
Frame = -3 / -1
Query: 375 GPTVWMTCLAGSLYPLVMTASPVSMGPRAPDSLTRSGPAAL*MAPSTXXXXXXXXXXXLT 196
GPT MT L G V ASPVS SL PAA *+ PST LT
Sbjct: 569 GPTACMTFLQGRS*ASVTLASPVSHPSSVLHSLKSPPPAAR*IEPSTPPPPRRVSFAALT 390
Query: 195 MASIRSSVMSPRIKPMRLL 139
MAS S VMSP + MR L
Sbjct: 389 MASTMSLVMSP*YRAMRSL 333
Score = 36.8 bits (74), Expect(2) = 4e-04
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -2 / -3
Query: 220 EGLVGSVDDGVDTEFGDVSSDQTDASVDGII 128
+GL+ +D+GVD E GDV+ Q DA ++ ++
Sbjct: 414 KGLICGIDNGVDHELGDVAMIQGDAIIESLV 322
Score = 19.8 bits (37), Expect(2) = 4e-04
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1 / -2
Query: 317 HHRCRWGRELQTP 279
HHRC R TP
Sbjct: 511 HHRCHIHRVSYTP 473
>GI2537321G gi2537321g LENGTH:492bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 492
Score = 33.1 bits (66), Expect = 0.009
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 34 HQRYSQPHSALPRSRFYSL 90
HQR+S+PH LPR R ++L
Sbjct: 218 HQRHSRPHGTLPRRRAFTL 274
>CL245CT288CN705 cl245ct288cn705 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi14181058,gi339155
Length = 1340
Score = 32.2 bits (64), Expect = 0.019
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2 / -3
Query: 415 GELLVRMSFTTEDWTDCVDDMLGRKFVSLGDDSITGVDGAESSRLLD 275
GE+ V + T+D VDD+L V+L ++ VDG ++L+D
Sbjct: 636 GEVDVLLGVETDDERGDVDDLLADADVALANEDTGVVDGLGETKLVD 496
>CL936CT1035CN1815 cl936ct1035cn1815 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy006aD06f.b,mgn
Length = 729
Score = 30.4 bits (60), Expect = 0.059
Identities = 16/35 (45%), Positives = 18/35 (50%)
Frame = -1 / +2
Query: 137 WNHQESRQFRPLEYSRRE*NLDLGRAE*GWEYR*C 33
W H RQ PL R E +L A+ G EYR*C
Sbjct: 572 W*HHAGRQALPLRQLRDEQDLGHQVADFGREYR*C 676
>CL818CT912CN1686 cl818ct912cn1686 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:11; ESTS:mgmy002bF10f.b,mg
Length = 1128
Score = 26.3 bits (51), Expect(2) = 0.16
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -2 / -3
Query: 454 ILRGQLETLAVAHGELLVRMSFTTEDWTDCVDDMLGRKFVSL 329
+L G ETL VA LLV + D V D+ G F SL
Sbjct: 754 LLDGLEETLQVAQVALLVEAGALEAEGVDDVVDLGGAVFESL 629
Score = 21.2 bits (40), Expect(2) = 0.16
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / -2
Query: 320 QHHRCRWGR 294
+HHR WGR
Sbjct: 545 RHHRQAWGR 519
>CL254CT300CN721 cl254ct300cn721 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14181024,gi339136
Length = 954
Score = 28.1 bits (55), Expect = 0.29
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3 / +1
Query: 378 IGPTVWMTCLAGSLYPLVMTASP 310
+GPT+W TC S P V ++ P
Sbjct: 364 VGPTLWETCTNISGAPAVFSSQP 432
>MGCS003BG02F.B mgcs003bG02f.b LENGTH:396bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 396
Score = 23.5 bits (45), Expect(2) = 0.68
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = -3 / -1
Query: 411 SFSLGCLSLPKIGPTVWMTCLA 346
S +LGC + +I P M C A
Sbjct: 156 SSALGCQCISRIAPGSMMACAA 91
Score = 22.1 bits (42), Expect(2) = 0.68
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -3 / -2
Query: 306 SMGPRAPDSLTRSGPAA 256
S GP P S SGPA+
Sbjct: 53 SRGPHHPTSSRASGPAS 3
>GI3391706G gi3391706g LENGTH:1027bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1027
Score = 26.7 bits (52), Expect = 0.75
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1 / +3
Query: 40 RYSQPHSALPRSRFYSLREYSNGRN 114
RY+ HS+ P RF + NGR+
Sbjct: 387 RYNNRHSSSPNDRFTLXIHHGNGRH 461
>GI14180582 gi14180582 LENGTH:655bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 655
Score = 26.7 bits (52), Expect = 0.82
Identities = 8/15 (53%), Positives = 12/15 (79%)
Frame = +3 / +1
Query: 414 PCATASVSSWPRRMA 458
PC +A ++SWPR +A
Sbjct: 217 PCCSAVLASWPRPLA 261
>MGCS005DH01F.B mgcs005dH01f.b LENGTH:569bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 569
Score = 26.7 bits (52), Expect = 0.82
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3 / +1
Query: 408 SSPCATASVSSWPRR 452
SSPC T+S +WP R
Sbjct: 61 SSPCRTSSRGNWPLR 105
>MGCM001BG04F.B mgcm001bG04f.b LENGTH:502bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 502
Score = 26.3 bits (51), Expect = 1.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2 / -3
Query: 101 PTGETAYSPDDSINRRIGLIRGDI 172
P GE A + D ++ R+G++ GDI
Sbjct: 299 PAGELAGAVDVRLDDRVGVVVGDI 228
>MGMY006BH12F.B mgmy006bH12f.b LENGTH:103bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 103
Score = 26.3 bits (51), Expect = 1.1
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = +3 / -3
Query: 12 SSQWASEASAIFPAS 56
SS W S A+A FPAS
Sbjct: 47 SSSWTSRATASFPAS 3
>MGMY004AH12F.B mgmy004aH12f.b LENGTH:490bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 490
Score = 25.8 bits (50), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (69%)
Frame = +3 / -1
Query: 300 PSTPVMLSSPRDTNFLP 350
PST V+LSSP + LP
Sbjct: 145 PSTSVLLSSPMSMSLLP 95
>CL819CT913CN1687 cl819ct913cn1687 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:6; ESTS:mgmy002bG06f.b,mgm
Length = 804
Score = 25.3 bits (49), Expect = 2.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1 / +2
Query: 7 EIHHNGHQKHQRYSQPHSA 63
+ +H+GH R+S PH A
Sbjct: 128 DFNHHGHSHGPRHSVPHHA 184
>MGCS011DG05F.B mgcs011dG05f.b LENGTH:504bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 504
Score = 24.4 bits (47), Expect(2) = 2.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3 / -3
Query: 366 VWMTCLAGSLYPLVMTASPV 307
+WM CL ++ V T SP+
Sbjct: 334 LWMACLVPAMAAFVRTQSPL 275
Score = 19.8 bits (37), Expect(2) = 2.0
Identities = 4/9 (44%), Positives = 7/9 (77%)
Frame = -3 / -2
Query: 312 PVSMGPRAP 286
P+++GP P
Sbjct: 242 PLALGPEVP 216
>MGCM006DB08F.B mgcm006dB08f.b LENGTH:312bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 312
Score = 25.3 bits (49), Expect = 2.2
Identities = 12/31 (38%), Positives = 14/31 (44%)
Frame = -2 / +2
Query: 94 RGENRIWISVELSEAGNIADASDAHCDESPR 2
R NR W+ S G IA A+ HC R
Sbjct: 155 RDSNRRWLPKWQSANGRIASANR*HCRRHAR 247
>CL231CT274CN677 cl231ct274cn677 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:1; ESTS:gi3391379g; LENGTH:
Length = 863
Score = 24.9 bits (48), Expect = 2.7
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = +1 / +1
Query: 31 KHQRYSQPHSALPRSRFYSLR 93
+H SQP LP+ Y LR
Sbjct: 181 RHPANSQPQLVLPKPHIYKLR 243
>CL595CT670CN1419 cl595ct670cn1419 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:mgap007cH07f.b; LEN
Length = 480
Score = 24.9 bits (48), Expect = 2.7
Identities = 10/22 (45%), Positives = 11/22 (49%)
Frame = +1 / -2
Query: 13 HHNGHQKHQRYSQPHSALPRSR 78
H H H R +Q ALP SR
Sbjct: 92 HRRRHPYHSRAAQSPQALPSSR 27
>CL595CT671CN1420 cl595ct671cn1420 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:gi3391623g; LENGTH:
Length = 943
Score = 24.9 bits (48), Expect = 2.7
Identities = 10/22 (45%), Positives = 11/22 (49%)
Frame = +1 / -1
Query: 13 HHNGHQKHQRYSQPHSALPRSR 78
H H H R +Q ALP SR
Sbjct: 289 HRRRHPYHSRAAQSPQALPSSR 224
>MGNS007DE07F.B mgns007dE07f.b LENGTH:264bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 264
Score = 24.9 bits (48), Expect = 2.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 410 ASR*DVFHYRRLDRLCG*HA 351
+SR D FH +D +CG*+A
Sbjct: 120 SSRRDYFHVGLIDLVCG*NA 61
>CL485CT559CN1245 cl485ct559cn1245 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3392212g,mgcs010d
Length = 1065
Score = 24.9 bits (48), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1 / +1
Query: 16 HNGHQKHQRYSQPHSALP 69
H GH+ H RY + ++A P
Sbjct: 301 HVGHRAHNRYYRQNAARP 354
>MGMY006DH07F.B mgmy006dH07f.b LENGTH:376bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 376
Score = 24.9 bits (48), Expect = 2.8
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +2 / -2
Query: 218 LRGGSGVDGAIHSAAGP 268
LR GV A+H AAGP
Sbjct: 210 LRAVVGVGAALHGAAGP 160
>CL444CT514CN1163 cl444ct514cn1163 COVERAGE:0.92; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14180290,gi14180
Length = 737
Score = 24.4 bits (47), Expect = 3.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1 / +3
Query: 19 NGHQKHQRYSQPHSALPRSR 78
+GH + QR+ PH P R
Sbjct: 72 HGHLRRQRHPHPHRRNPTQR 131
>GI14180448 gi14180448 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 671
Score = 24.4 bits (47), Expect = 3.7
Identities = 16/45 (35%), Positives = 20/45 (43%)
Frame = -3 / -1
Query: 405 SLGCLSLPKIGPTVWMTCLAGSLYPLVMTASPVSMGPRAPDSLTR 271
S+G LSL G VW L LY L+ S + G + L R
Sbjct: 233 SVGLLSL*PGGGPVWAAQLVAGLYMLLGGPSRTAGGAGSGARLAR 99
>CL809CT900CN1674 cl809ct900cn1674 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:17; ESTS:mgmy002aH02f.b,mg
Length = 1649
Score = 24.4 bits (47), Expect = 3.7
Identities = 9/24 (37%), Positives = 13/24 (53%)
Frame = +1 / -1
Query: 7 EIHHNGHQKHQRYSQPHSALPRSR 78
E H N QKH++ ++P P R
Sbjct: 1145 EYHQNKKQKHKKIARPGMKRPGPR 1074
>MGCS004CH12F.B mgcs004cH12f.b LENGTH:314bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 314
Score = 24.4 bits (47), Expect = 3.7
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = -1 / +2
Query: 311 RCRWGRELQTP*PGQ 267
RCR GREL+ P P Q
Sbjct: 155 RCRRGRELR*PRPDQ 199
>CL1140CT1243CN2032 cl1140ct1243cn2032 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgcm005bC01f.b,m
Length = 572
Score = 24.4 bits (47), Expect = 3.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1 / -2
Query: 164 LGSNRCVC*WNHQESRQFRP 105
LG+ RCV W + R+ RP
Sbjct: 337 LGA*RCV*TWRSAQGRKQRP 278
>CL1040CT1141CN1924 cl1040ct1141cn1924 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcm002cE11f.b,m
Length = 376
Score = 21.7 bits (41), Expect(2) = 3.7
Identities = 7/19 (36%), Positives = 13/19 (67%)
Frame = -3 / -1
Query: 345 GSLYPLVMTASPVSMGPRA 289
G+ +PL+ + + +GPRA
Sbjct: 349 GAQHPLLAEVADLDVGPRA 293
Score = 21.2 bits (40), Expect(2) = 3.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1 / -1
Query: 170 CLLGSNRCVC 141
CL G +RC C
Sbjct: 58 CLTGGSRCSC 29
>CL1260CT1363CN2153 cl1260ct1363cn2153 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:8; ESTS:mgcm012dD10f.b,m
Length = 1060
Score = 24.4 bits (47), Expect = 4.1
Identities = 13/34 (38%), Positives = 16/34 (46%)
Frame = -2 / -3
Query: 301 GAESSRLLDQVRSCSXXXXXXXXXXXAEGLVGSV 200
GA+ S+ LD+ S EGLVGSV
Sbjct: 338 GAQRSQGLDKDSSLDGHVQATGDTGALEGLVGSV 237
>CL857CT953CN1728 cl857ct953cn1728 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:5; ESTS:mgmy003bC06f.b,mgc
Length = 665
Score = 24.0 bits (46), Expect(2) = 4.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3 / -1
Query: 411 SPCATASVSSWPRR 452
S CA+ S +SWP++
Sbjct: 329 SSCASCSPTSWPKK 288
Score = 18.5 bits (34), Expect(2) = 4.2
Identities = 8/42 (19%), Positives = 19/42 (45%)
Frame = +2 / -3
Query: 164 GDITELRIDAIVNAANKSLRGGSGVDGAIHSAAGPDLVKESG 289
GD+ + +++ + A+ + G GA+ + V +G
Sbjct: 573 GDVGQQQVEELAAPAHVAAHGQGAERGAVVGTLARNEVDAAG 448
>MGCM008CE02F.B mgcm008cE02f.b LENGTH:489bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 489
Score = 23.5 bits (45), Expect(2) = 4.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2 / -3
Query: 55 EAGNIADASDAHCDESPR 2
E G D SD HCD R
Sbjct: 100 EEGGEKDLSDLHCDGLDR 47
Score = 19.8 bits (37), Expect(2) = 4.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2 / -3
Query: 202 VDDGVDTEFGDVSSDQTDASVDGIIRRVGSFA 107
VD+G + G + A DG++ VG A
Sbjct: 400 VDNGESGKAGVRAELTAPAGSDGVVTAVGGTA 305
>GI14180141 gi14180141 LENGTH:695bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 695
Score = 24.0 bits (46), Expect = 5.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1 / +1
Query: 10 IHHNGHQKHQRYSQPHSALPRSRFYSLREYSN 105
IH+ G HQ ++QP+S+ + + R +N
Sbjct: 181 IHNFGPTPHQIFNQPYSSREKGHLPNQRLDTN 276
>CL574CT648CN1391 cl574ct648cn1391 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3391748g,mgap008
Length = 801
Score = 24.0 bits (46), Expect = 5.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1 / +2
Query: 28 QKHQRYSQPHSALP 69
+KH YS HSALP
Sbjct: 740 RKHALYSVTHSALP 781
>CL983CT1084CN1866 cl983ct1084cn1866 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:15; ESTS:mgcm001bH02f.b,m
Length = 1221
Score = 24.0 bits (46), Expect = 5.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 452 SPRPT*DTRGSTW 414
SPRP DTR ++W
Sbjct: 1086 SPRPGRDTRSASW 1048
>GI14180597 gi14180597 LENGTH:1073bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1073
Score = 24.0 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 46 SQPHSALPRSRFYSL 90
+QPH+A P SR SL
Sbjct: 1022 TQPHTATPPSRLISL 1066
>MGNS002AH08F.B mgns002aH08f.b LENGTH:498bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 498
Score = 24.0 bits (46), Expect = 5.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1 / +3
Query: 10 IHHNGHQKHQRYSQPHSALPRSR 78
IH H +H+R ++PH + R +
Sbjct: 369 IHAKLHTRHRRGARPHILIRRPK 437
>MGNS013BF07F.B mgns013bF07f.b LENGTH:310bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 310
Score = 24.0 bits (46), Expect = 5.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1 / +3
Query: 37 QRYSQPHSALPRSRFYSLRE 96
QRY +PH+ R FY E
Sbjct: 159 QRYDEPHAPRRRQFFYGQLE 218
>MGCM002AC06F.B mgcm002aC06f.b LENGTH:271bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 271
Score = 24.0 bits (46), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3 / +1
Query: 357 TCLAGSLYPLVMTASPVSMG 298
+CL G L+PL ++ S+G
Sbjct: 169 SCLRGDLHPLALSPQSRSLG 228
>CL290CT342CN797 cl290ct342cn797 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14180934,mgcm001b
Length = 463
Score = 24.0 bits (46), Expect = 5.1
Identities = 11/35 (31%), Positives = 14/35 (39%)
Frame = -1 / -1
Query: 311 RCRWGRELQTP*PGQVLQXXXXXXXXXXXRGGTCW 207
RCRW L+ +VLQ G +CW
Sbjct: 208 RCRWRSLLRP*CTRRVLQRGRAPGSATGWSGCSCW 104
>MGCS010BD08F.B mgcs010bD08f.b LENGTH:553bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 553
Score = 24.0 bits (46), Expect = 5.1
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = -3 / -1
Query: 198 TMASIRSSVMSPRIKPM 148
+++++RSS+ S RI+PM
Sbjct: 478 SISAMRSSIASSRIRPM 428
>CL40CT63CN211 cl40ct63cn211 COVERAGE:0.98; CRAWID: 3;
TOTAL_ESTS:15; ESTS:gi14181519,gi1418138
Length = 1391
Score = 24.0 bits (46), Expect = 5.3
Identities = 8/30 (26%), Positives = 16/30 (52%)
Frame = +2 / +3
Query: 14 ITMGIRSISDIPSLTQLYRDPDSILSASIP 103
+ + +R + +PS +L P S S ++P
Sbjct: 486 LPLSLRPLPSVPSFARLLSLPSSPPSLALP 575
>GI14181439 gi14181439 LENGTH:705bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 705
Score = 24.0 bits (46), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2 / +1
Query: 8 RFITMGIRSISDIPSLTQLYRDPDS 82
R+ T+G + P T Y DPDS
Sbjct: 319 RWQTLGANRDASPPHATLTYNDPDS 393
>CL862CT960CN1735 cl862ct960cn1735 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy003bE04f.b,mgc
Length = 465
Score = 24.0 bits (46), Expect = 5.3
Identities = 11/30 (36%), Positives = 15/30 (49%)
Frame = +2 / -2
Query: 221 RGGSGVDGAIHSAAGPDLVKESGALGPIDT 310
+G V G + GPD V + +GP DT
Sbjct: 440 KGDKEVVGQLARLVGPDSVAGAIVVGPEDT 351
>CL397CT463CN1027 cl397ct463cn1027 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:12; ESTS:gi14180504,mgmy00
Length = 746
Score = 24.0 bits (46), Expect = 5.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 294 SAPSTPVMLSSPRDTN 341
SAPST S+PR TN
Sbjct: 341 SAPSTLTRTSAPRTTN 388
>CL27CT33CN118 cl27ct33cn118 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:1;
ESTS:gi14181551; LENGTH:627
Length = 627
Score = 24.0 bits (46), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (58%)
Frame = +3 / +1
Query: 12 SSQWASEASAIFPASLSSTEIQILFSP 92
SS + S+ F LSS+E +LFSP
Sbjct: 493 SSPIPATYSSSFLVYLSSSEFPVLFSP 573
>MGMY004AD04F.B mgmy004aD04f.b LENGTH:467bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 467
Score = 23.5 bits (45), Expect = 7.0
Identities = 11/19 (57%), Positives = 13/19 (67%)
Frame = -3 / +3
Query: 195 MASIRSSVMSPRIKPMRLL 139
M SIRSS SPR+ M +L
Sbjct: 165 MLSIRSSWKSPRLVVMAML 221
>GI14180952 gi14180952 LENGTH:691bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 691
Score = 23.5 bits (45), Expect = 7.0
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1 / -2
Query: 317 HHRCRWGR 294
H RC+WGR
Sbjct: 234 HQRCQWGR 211
>CL907CT1006CN1785 cl907ct1006cn1785 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy004dF04f.b,mg
Length = 392
Score = 23.5 bits (45), Expect = 7.0
Identities = 9/26 (34%), Positives = 12/26 (45%)
Frame = +1 / +3
Query: 1 REEIHHNGHQKHQRYSQPHSALPRSR 78
R + HH HQ + + H A R R
Sbjct: 285 RRQEHHRHQGSHQGHHRVHRACHRER 362
>CL298CT350CN808 cl298ct350cn808 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:7; ESTS:gi14180900,mgmy001a
Length = 1113
Score = 23.5 bits (45), Expect = 7.0
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = +1 / -3
Query: 13 HHNGHQKHQRYSQPHSALPRSR 78
H +G + +RY Q PRSR
Sbjct: 649 HQSGGTRRRRYGQ*GGGRPRSR 584
>CL762CT851CN1625 cl762ct851cn1625 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:5; ESTS:mgmy001cD04f.b,mgm
Length = 682
Score = 23.5 bits (45), Expect = 7.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1 / +3
Query: 449 PRPT*DTRGST 417
PRPT +R ST
Sbjct: 429 PRPTPPSRSST 461
>MGCS011BE03F.B mgcs011bE03f.b LENGTH:240bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 240
Score = 23.5 bits (45), Expect = 7.0
Identities = 10/24 (41%), Positives = 13/24 (53%)
Frame = -3 / -2
Query: 384 PKIGPTVWMTCLAGSLYPLVMTAS 313
PK+G TC +YP+ M AS
Sbjct: 113 PKVGWESLPTCQIR*IYPMTMLAS 42
>GI14181032 gi14181032 LENGTH:650bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 650
Score = 23.5 bits (45), Expect = 7.3
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 38 SDIPSLTQLYRDP 76
SD+PSL+ + RDP
Sbjct: 330 SDVPSLSIMLRDP 368
>MGCM003CG01F.B mgcm003cG01f.b LENGTH:379bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 379
Score = 23.5 bits (45), Expect = 7.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 221 RGGSGVDGAIH 253
+GG GVDG +H
Sbjct: 201 KGGGGVDGELH 169
>CL735CT821CN1594 cl735ct821cn1594 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:9; ESTS:mgmy001bA09f.b,mgm
Length = 1123
Score = 23.5 bits (45), Expect = 7.5
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = +3 / +2
Query: 267 LTWSRSLELSAPSTPVMLSSPR 332
L W R+ L S+P +SSPR
Sbjct: 503 LPWHRTTPLLRSSSPGPVSSPR 568
>MGMY002DC05F.B mgmy002dC05f.b LENGTH:397bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 397
Score = 23.5 bits (45), Expect = 7.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / -3
Query: 399 LTRSSPCATASVSSWP 446
+T + PC SVS WP
Sbjct: 194 VTDTDPCWPLSVSPWP 147
>GI14180445 gi14180445 LENGTH:704bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 704
Score = 23.5 bits (45), Expect = 7.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3 / -1
Query: 393 DILTRSSPCATASVSSWP 446
DIL S PC S + WP
Sbjct: 170 DILPLSLPCFATSGAYWP 117
>CL35CT41CN141 cl35ct41cn141 COVERAGE:1.0; CRAWID: 4; TOTAL_ESTS:1;
ESTS:gi3391531g; LENGTH:102
Length = 1028
Score = 23.5 bits (45), Expect = 7.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 457 AILRGQLETLAVAHGEL 407
A LRG++E + ++HG L
Sbjct: 277 AFLRGRIEPIVLSHGLL 227
>CL40CT56CN169 cl40ct56cn169 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:24; ESTS:gi14180935,mgcm004dC
Length = 1076
Score = 23.1 bits (44), Expect = 9.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -1 / -1
Query: 149 CVC*WNHQESRQFRPLEYSRRE*NLDLGRAE 57
C W H+ Q+RP + S R D+ + +
Sbjct: 413 CPWPWRHE*DPQYRPWQCSGRHSRPDVAKPQ 321
>CL1444CT1548CN2344 cl1444ct1548cn2344 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgcs006dF11f.b,m
Length = 540
Score = 23.1 bits (44), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +1 / +3
Query: 13 HHNGHQKHQR 42
HH GH +H R
Sbjct: 66 HHTGHPRHSR 95
>MGNS007BG04F.B mgns007bG04f.b LENGTH:485bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 485
Score = 23.1 bits (44), Expect = 9.6
Identities = 11/35 (31%), Positives = 13/35 (36%)
Frame = +1 / +3
Query: 16 HNGHQKHQRYSQPHSALPRSRFYSLREYSNGRNCL 120
H H H+R S P RF G+N L
Sbjct: 372 HKAHHHHERQSSPRHDKSLPRFV*HSPGPRGQNSL 476
>MGCM012DE03F.B mgcm012dE03f.b LENGTH:240bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 240
Score = 23.1 bits (44), Expect = 9.6
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = -1 / -1
Query: 419 TWRASR*DVFHYRRLDRLCG* 357
+WR R H+RR R CG*
Sbjct: 132 SWRTRRDGERHHRR*HRPCG* 70
>MGAP008BB06F.B mgap008bB06f.b LENGTH:375bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 375
Score = 23.1 bits (44), Expect = 9.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1 / +3
Query: 13 HHNGHQKHQRYSQPHSALPRSRFYSLREYS 102
HH+ H K R + + Y+L E+S
Sbjct: 132 HHSRHDKKARKKRRKELIKTKNNYNLYEWS 221
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
Posted date: Mar 22, 2002 5:31 PM
Number of letters in database: 2,543,711
Number of sequences in database: 4717
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2798901
Number of Sequences: 4717
Number of extensions: 36411
Number of successful extensions: 1743
Number of sequences better than 10.0: 82
length of query: 152
length of database: 847,903
effective HSP length: 39
effective length of query: 113
effective length of database: 663,940
effective search space: 75025220
effective search space used: 75025220
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 44 (23.1 bits)