TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_Mgr_IFAFSGB_nr/FgrNCT3P_
1612_B03_D06ZT.seq
(577 letters)
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
4717 sequences; 2,543,711 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MGCS002BD06F.B mgcs002bD06f.b LENGTH:508bp ; DIRECTION:0 ; CLONE... 29 0.15
GI14181476 gi14181476 LENGTH:1050bp ; DIRECTION:0 ; CLONE: n/a ;... 29 0.28
MGCM012BA03F.B mgcm012bA03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE... 28 0.39
MGMY004AE07F.B mgmy004aE07f.b LENGTH:472bp ; DIRECTION:0 ; CLONE... 28 0.54
MGMY003CB07F.B mgmy003cB07f.b LENGTH:318bp ; DIRECTION:0 ; CLONE... 28 0.54
CL662CT745CN1512 cl662ct745cn1512 COVERAGE:0.97; CRAWID: 1; TOTA... 27 0.74
GI14180448 gi14180448 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ; ... 27 0.74
CL512CT586CN1296 cl512ct586cn1296 COVERAGE:0.99; CRAWID: 1; TOTA... 27 1.0
CL802CT893CN1667 cl802ct893cn1667 COVERAGE:0.97; CRAWID: 1; TOTA... 27 1.0
CL155CT192CN520 cl155ct192cn520 COVERAGE:0.95; CRAWID: 1; TOTAL_... 26 1.4
MGCM012DG10F.B mgcm012dG10f.b LENGTH:417bp ; DIRECTION:0 ; CLONE... 26 1.4
MGNS010AB04F.B mgns010aB04f.b LENGTH:505bp ; DIRECTION:0 ; CLONE... 26 1.4
MGCM008CG05F.B mgcm008cG05f.b LENGTH:305bp ; DIRECTION:0 ; CLONE... 26 1.4
CL422CT490CN1108 cl422ct490cn1108 COVERAGE:1.0; CRAWID: 1; TOTAL... 26 1.9
CL671CT754CN1522 cl671ct754cn1522 COVERAGE:1.0; CRAWID: 1; TOTAL... 26 1.9
CL831CT926CN1701 cl831ct926cn1701 COVERAGE:0.98; CRAWID: 1; TOTA... 26 1.9
MGMY004DH01F.B mgmy004dH01f.b LENGTH:410bp ; DIRECTION:0 ; CLONE... 26 1.9
CL31CT37CN129 cl31ct37cn129 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS... 25 2.6
CL221CT261CN659 cl221ct261cn659 COVERAGE:0.99; CRAWID: 1; TOTAL_... 25 2.6
CL607CT685CN1435 cl607ct685cn1435 COVERAGE:0.99; CRAWID: 1; TOTA... 25 2.6
GI3391521G gi3391521g LENGTH:1071bp ; DIRECTION:0 ; CLONE: n/a ;... 25 2.6
MGCS003AF01F.B mgcs003aF01f.b LENGTH:378bp ; DIRECTION:0 ; CLONE... 25 2.6
MGCS010AA09F.B mgcs010aA09f.b LENGTH:513bp ; DIRECTION:0 ; CLONE... 25 3.6
CL132CT168CN475 cl132ct168cn475 COVERAGE:0.96; CRAWID: 1; TOTAL_... 25 3.6
CL30CT36CN127 cl30ct36cn127 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS... 25 3.6
MGCS002BC09F.B mgcs002bC09f.b LENGTH:398bp ; DIRECTION:0 ; CLONE... 25 3.6
CL536CT610CN1333 cl536ct610cn1333 COVERAGE:1.0; CRAWID: 1; TOTAL... 24 5.0
GI14181124 gi14181124 LENGTH:666bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 5.0
CL334CT393CN873 cl334ct393cn873 COVERAGE:0.97; CRAWID: 1; TOTAL_... 24 5.0
CL906CT1005CN1784 cl906ct1005cn1784 COVERAGE:0.99; CRAWID: 1; TO... 24 5.0
CL202CT242CN626 cl202ct242cn626 COVERAGE:0.98; CRAWID: 1; TOTAL_... 24 5.0
GI14181384 gi14181384 LENGTH:726bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 5.0
CL928CT1027CN1807 cl928ct1027cn1807 COVERAGE:1.0; CRAWID: 1; TOT... 24 5.0
MGCM001BF04F.B mgcm001bF04f.b LENGTH:389bp ; DIRECTION:0 ; CLONE... 24 5.0
CL1413CT1516CN2312 cl1413ct1516cn2312 COVERAGE:0.98; CRAWID: 1; ... 24 5.0
GI3392149G gi3392149g LENGTH:900bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.8
GI3391763G gi3391763g LENGTH:748bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.8
GI3391981G gi3391981g LENGTH:818bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.8
CL411CT477CN1074 cl411ct477cn1074 COVERAGE:1.0; CRAWID: 1; TOTAL... 24 6.8
GI14181506 gi14181506 LENGTH:740bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.8
CL1034CT1135CN1918 cl1034ct1135cn1918 COVERAGE:0.97; CRAWID: 1; ... 24 6.8
MGCS009DE07F.B mgcs009dE07f.b LENGTH:465bp ; DIRECTION:0 ; CLONE... 24 6.8
MGCS006AG08F.B mgcs006aG08f.b LENGTH:558bp ; DIRECTION:0 ; CLONE... 24 6.8
MGNS012AA03F.B mgns012aA03f.b LENGTH:343bp ; DIRECTION:0 ; CLONE... 24 6.8
MGMY004CC05F.B mgmy004cC05f.b LENGTH:416bp ; DIRECTION:0 ; CLONE... 24 6.8
MGCS006DD03F.B mgcs006dD03f.b LENGTH:505bp ; DIRECTION:0 ; CLONE... 24 6.8
GI2537320G gi2537320g LENGTH:951bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.8
GI3391867G gi3391867g LENGTH:757bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.8
GI3391480G gi3391480g LENGTH:925bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 6.8
MGCS009DE04F.B mgcs009dE04f.b LENGTH:354bp ; DIRECTION:0 ; CLONE... 24 6.8
CL20CT26CN84 cl20ct26cn84 COVERAGE:0.97; CRAWID: 1; TOTAL_ESTS:2... 24 6.8
GI2537263G gi2537263g LENGTH:510bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 9.4
GI14181227 gi14181227 LENGTH:665bp ; DIRECTION:0 ; CLONE: n/a ; ... 24 9.4
CL773CT862CN1636 cl773ct862cn1636 COVERAGE:0.98; CRAWID: 1; TOTA... 24 9.4
CL999CT1100CN1882 cl999ct1100cn1882 COVERAGE:0.97; CRAWID: 1; TO... 24 9.4
CL892CT991CN1769 cl892ct991cn1769 COVERAGE:0.99; CRAWID: 1; TOTA... 24 9.4
MGNS010BD01F.B mgns010bD01f.b LENGTH:419bp ; DIRECTION:0 ; CLONE... 24 9.4
MGCS006CB08F.B mgcs006cB08f.b LENGTH:490bp ; DIRECTION:0 ; CLONE... 24 9.4
CL991CT1092CN1874 cl991ct1092cn1874 COVERAGE:0.96; CRAWID: 1; TO... 24 9.4
MGNS008BG10F.B mgns008bG10f.b LENGTH:436bp ; DIRECTION:0 ; CLONE... 24 9.4
MGCS010CB12F.B mgcs010cB12f.b LENGTH:540bp ; DIRECTION:0 ; CLONE... 24 9.4
MGAP008CF06F.B mgap008cF06f.b LENGTH:485bp ; DIRECTION:0 ; CLONE... 24 9.4
MGNS007DH11F.B mgns007dH11f.b LENGTH:364bp ; DIRECTION:0 ; CLONE... 24 9.4
MGCS009BD11F.B mgcs009bD11f.b LENGTH:365bp ; DIRECTION:0 ; CLONE... 24 9.4
MGCS009AA06F.B mgcs009aA06f.b LENGTH:522bp ; DIRECTION:0 ; CLONE... 24 9.4
CL1191CT1294CN2083 cl1191ct1294cn2083 COVERAGE:0.99; CRAWID: 1; ... 24 9.4
GI2537322G gi2537322g LENGTH:2750bp ; DIRECTION:0 ; CLONE: n/a ;... 23 9.9
>MGCS002BD06F.B mgcs002bD06f.b LENGTH:508bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 508
Score = 29.5 bits (58), Expect = 0.15
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2 / +2
Query: 468 TKCCIPGLPERILAQGTSRSLIGQSSWPHAGDMARTGS 355
T+C +P LP RIL R + +S +A +RT +
Sbjct: 89 TRCLLPPLPPRILVVFAMRRALSRSITANASRTSRTSA 202
>GI14181476 gi14181476 LENGTH:1050bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1050
Score = 28.6 bits (56), Expect = 0.28
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3 / -2
Query: 204 RRSFGCHYLCTCSSSLKYGCNTI 272
RR+FG Y+CTC L G + +
Sbjct: 569 RRAFGQRYVCTCLRCLTRGMSAL 501
>MGCM012BA03F.B mgcm012bA03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 395
Score = 28.1 bits (55), Expect = 0.39
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3 / -2
Query: 213 FGCHYLCTCSSSLKYGCNTIRFSS 284
F CHYLC + TI + S
Sbjct: 103 FACHYLCRSKMKCEIAAQTIEYQS 32
>MGMY004AE07F.B mgmy004aE07f.b LENGTH:472bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 472
Score = 27.6 bits (54), Expect = 0.54
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2 / -1
Query: 396 SSWPHAGDMARTGSSTHSFP 337
++WP + D AR S +H FP
Sbjct: 301 NAWPCSVDTARFSSQSHLFP 242
>MGMY003CB07F.B mgmy003cB07f.b LENGTH:318bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 318
Score = 27.6 bits (54), Expect = 0.54
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3 / -2
Query: 216 GCHYLCTCSSSLKYG 260
GC Y+CTC SS+ G
Sbjct: 311 GCAYVCTCLSSVASG 267
>CL662CT745CN1512 cl662ct745cn1512 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgap007aD01f.b,mgm
Length = 628
Score = 27.2 bits (53), Expect = 0.74
Identities = 11/23 (47%), Positives = 13/23 (55%)
Frame = +2 / -1
Query: 488 LYLQGVILLYDFPCICPIAPIRH 556
L LQ + L FP CP AP+ H
Sbjct: 529 LCLQSLSLPNRFPSSCPCAPLEH 461
>GI14180448 gi14180448 LENGTH:671bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 671
Score = 27.2 bits (53), Expect = 0.74
Identities = 14/34 (41%), Positives = 16/34 (46%)
Frame = +1 / -3
Query: 325 RARHREAMS*TPSPCHVASVRPR*LANQRSTCPL 426
R HR MS P P V S P +N R+T L
Sbjct: 534 RGIHRHTMSSMPPPSSVISYEPLPQSNLRTTTQL 433
>CL512CT586CN1296 cl512ct586cn1296 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgns001aA01f.b,mgn
Length = 1309
Score = 26.7 bits (52), Expect = 1.0
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = -2 / +3
Query: 363 TGSSTHSFPVSSTTMNAVFTWQEYEI 286
TGS T S PV+S + TW +
Sbjct: 528 TGSRTSSLPVTSLCLPCTVTWTRLSV 605
>CL802CT893CN1667 cl802ct893cn1667 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy002aE07f.b,mgm
Length = 465
Score = 26.7 bits (52), Expect = 1.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 462 CCIPGLPERILAQGTSRSLI 403
CC G+ ++A GT RSLI
Sbjct: 151 CCARGVEPSVIAGGTVRSLI 92
>CL155CT192CN520 cl155ct192cn520 COVERAGE:0.95; CRAWID: 1;
TOTAL_ESTS:4; ESTS:gi14181299,gi339237
Length = 1148
Score = 26.3 bits (51), Expect = 1.4
Identities = 12/29 (41%), Positives = 14/29 (47%)
Frame = +1 / +3
Query: 301 PSKDSIHCRARHREAMS*TPSPCHVASVR 387
P D + CR RHR A S +AS R
Sbjct: 510 PRSDQLGCRLRHRPAHXPAVSSRSLASTR 596
>MGCM012DG10F.B mgcm012dG10f.b LENGTH:417bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 417
Score = 26.3 bits (51), Expect = 1.4
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = +1 / -1
Query: 295 FLPSKDSIHCRA 330
FLP K S+HCR+
Sbjct: 327 FLPRKSSVHCRS 292
>MGNS010AB04F.B mgns010aB04f.b LENGTH:505bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 505
Score = 26.3 bits (51), Expect = 1.4
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = +2 / +1
Query: 413 LLVPWASIRSGNPGMQHLVRTW 478
LLVPW+ IRS G ++ W
Sbjct: 316 LLVPWSWIRSWIQGSSEDIQVW 381
>MGCM008CG05F.B mgcm008cG05f.b LENGTH:305bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 305
Score = 26.3 bits (51), Expect = 1.4
Identities = 9/24 (37%), Positives = 13/24 (53%)
Frame = +2 / +2
Query: 47 RTCLKCLRSPLQNYLTPNSKLILW 118
RTC RSP + P++ +LW
Sbjct: 44 RTCWTRFRSPSSHIFQPSAAFLLW 115
>CL422CT490CN1108 cl422ct490cn1108 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi14180403,mgap010c
Length = 1027
Score = 25.8 bits (50), Expect = 1.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 50 TCLKCLRSPLQNYLTPNS 103
TCL CLR+ L++ L P +
Sbjct: 584 TCLLCLRASLKSMLPPTT 637
>CL671CT754CN1522 cl671ct754cn1522 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgap007bB07f.b,mgns
Length = 846
Score = 25.8 bits (50), Expect = 1.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1 / +3
Query: 331 RHREAMS*TPSPCHVASVRPR*LANQ 408
RHR+ + +PSPC + P L+ Q
Sbjct: 108 RHRKILPSSPSPCAHSGASPTRLSTQ 185
>CL831CT926CN1701 cl831ct926cn1701 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:12; ESTS:mgmy002dB10f.b,mg
Length = 691
Score = 25.8 bits (50), Expect = 1.9
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = -2 / -3
Query: 552 RIGAMGQMHGKSYSRMTP 499
RIG +G + G +R TP
Sbjct: 251 RIGPLGDLGGDGPARSTP 198
>MGMY004DH01F.B mgmy004dH01f.b LENGTH:410bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 410
Score = 25.8 bits (50), Expect = 1.9
Identities = 10/28 (35%), Positives = 13/28 (45%)
Frame = -2 / -1
Query: 387 PHAGDMARTGSSTHSFPVSSTTMNAVFT 304
P AGD+ TG HS S + +F
Sbjct: 143 PSAGDLICTGGCLHSLSGSLLRILWLFA 60
>CL31CT37CN129 cl31ct37cn129 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:5;
ESTS:gi14181534,gi14181364
Length = 950
Score = 25.3 bits (49), Expect = 2.6
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = -2 / +3
Query: 318 NAVFTWQEYEIPMKIVLYCIHTSATM 241
+A TW I M I Y +HT T+
Sbjct: 222 SAALTWVAAAIVMGITAYFVHTERTV 299
>CL221CT261CN659 cl221ct261cn659 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:9; ESTS:gi14181138,mgcm008d
Length = 846
Score = 25.3 bits (49), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = -2 / +3
Query: 81 CNGLLKHFRQVLHSHLKIFWLSR 13
C LL+ R+ LH H W SR
Sbjct: 432 CGWLLRQVRRYLHLHRLAGWRSR 500
>CL607CT685CN1435 cl607ct685cn1435 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3391571g,mgcm002
Length = 983
Score = 25.3 bits (49), Expect = 2.6
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = +3 / -1
Query: 168 GREPGKWRMEL*RRSFG 218
G PG WRME+ R G
Sbjct: 239 GSSPGGWRMEMQTRPLG 189
Score = 24.4 bits (47), Expect = 5.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 182 QMANGTLTQIFWLPLPLHLF 241
Q+A TLT W+P PL F
Sbjct: 576 QLARYTLTIGEWVPAPLEFF 517
>GI3391521G gi3391521g LENGTH:1071bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 1071
Score = 25.3 bits (49), Expect = 2.6
Identities = 8/18 (44%), Positives = 9/18 (49%)
Frame = -2 / +3
Query: 396 SSWPHAGDMARTGSSTHS 343
S WPH D A TH+
Sbjct: 378 SYWPHPADQAEVEGKTHT 431
>MGCS003AF01F.B mgcs003aF01f.b LENGTH:378bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 378
Score = 25.3 bits (49), Expect = 2.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1 / +3
Query: 283 RNFVFLPSKDSIHCRARHREAMS*TPSPCHVASVR 387
R+ + L + R RE + P PCH S+R
Sbjct: 51 RSLLRLHRPTRLEPRRLRRERIGMAPRPCHRGSLR 155
>MGCS010AA09F.B mgcs010aA09f.b LENGTH:513bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 513
Score = 24.9 bits (48), Expect = 3.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3 / -2
Query: 219 CHYLCTCSSSLKYGCNTIR 275
C C C+++ + GC T R
Sbjct: 242 CRRTCPCATARRRGCGTAR 186
>CL132CT168CN475 cl132ct168cn475 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:6; ESTS:gi14181343,mgap007b
Length = 946
Score = 24.9 bits (48), Expect = 3.6
Identities = 10/29 (34%), Positives = 14/29 (47%)
Frame = -2 / +1
Query: 90 R*FCNGLLKHFRQVLHSHLKIFWLSRNLC 4
R F +KH Q+ H+H + W R C
Sbjct: 91 RGFFTMAIKHNNQIPHNHFRKDWQRRVRC 177
>CL30CT36CN127 cl30ct36cn127 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:3;
ESTS:gi3392250g,mgmy002bF0
Length = 957
Score = 24.9 bits (48), Expect = 3.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 412 STCPLGKYTLR 444
+TCP GKYT R
Sbjct: 730 ATCPTGKYTTR 762
>MGCS002BC09F.B mgcs002bC09f.b LENGTH:398bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 398
Score = 24.9 bits (48), Expect = 3.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3 / +1
Query: 150 YPP*GYGREPGKWRMEL*RRSFGCHYLCTCSSSLKYGCNTIRFS 281
+PP R KW + R + LC S+S T+R S
Sbjct: 100 WPPARESRPWSKWLLTSTRAGWPLARLCATSTSTSRASRTLRIS 231
>CL536CT610CN1333 cl536ct610cn1333 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:gi3391901g,mgns012c
Length = 992
Score = 24.4 bits (47), Expect = 5.0
Identities = 11/29 (37%), Positives = 13/29 (43%)
Frame = +1 / -3
Query: 49 NLSEMFEKPITELSDPKLKVDIMDKTSYC 135
N EMF P+ S + KVD YC
Sbjct: 438 NHYEMFRLPVDPCSRERAKVDADGGDEYC 352
>GI14181124 gi14181124 LENGTH:666bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 666
Score = 24.4 bits (47), Expect = 5.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 402 GQSSWPHAGD 373
G +SWPH GD
Sbjct: 148 GTASWPHPGD 119
>CL334CT393CN873 cl334ct393cn873 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:33; ESTS:gi14180776,gi14180
Length = 1639
Score = 24.4 bits (47), Expect = 5.0
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2 / +3
Query: 531 MHGKSYSRMTPCR*RLNLHVLTKCCIPGLPERILAQGTSRSLIGQSSWP 385
+H R PC R +H++ + P Q SL+ SSWP
Sbjct: 168 VHSFKTKRQ*PCASRKYIHLIPPSFLNENPLYPSNQSKCASLLLLSSWP 314
>CL906CT1005CN1784 cl906ct1005cn1784 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy004dE01f.b,mg
Length = 530
Score = 24.4 bits (47), Expect = 5.0
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = +2 / +3
Query: 374 SPACGQDDWPINDLLVPWASIRSGNP 451
SPA WP + LLVP ++ P
Sbjct: 114 SPAPSWSPWPPSSLLVPLSTTECTRP 191
>CL202CT242CN626 cl202ct242cn626 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:3; ESTS:gi14181172,gi141811
Length = 988
Score = 24.4 bits (47), Expect = 5.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 395 HLGRTLATWQGLGV 354
H+GR A W+GLG+
Sbjct: 625 HVGRRHAGWRGLGM 584
>GI14181384 gi14181384 LENGTH:726bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 726
Score = 24.4 bits (47), Expect = 5.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 210 SFGCHYLCTCSSSLK 254
S+GCH+ TC +S K
Sbjct: 132 SWGCHHNSTCFTSAK 176
>CL928CT1027CN1807 cl928ct1027cn1807 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgmy005cF06f.b,mgc
Length = 834
Score = 24.4 bits (47), Expect = 5.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2 / -2
Query: 287 ISYSCQVKTAFIVVLDTGKL*VELPVLAMSPAC 385
ISY C + I + G L E+ V A SPAC
Sbjct: 173 ISYVCLGRKR*IRGRNGGNLAREITVYAWSPAC 75
>MGCM001BF04F.B mgcm001bF04f.b LENGTH:389bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 389
Score = 24.4 bits (47), Expect = 5.0
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1 / +1
Query: 43 VENLSEMFEKPITELSDPKLKVDIMDKTSYCNK 141
V+ E E P + DP +VDI + C +
Sbjct: 283 VDGFREQGENPHISVEDPFFQVDIKEGFKACRR 381
>CL1413CT1516CN2312 cl1413ct1516cn2312 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgcs004bA05f.b,m
Length = 662
Score = 24.4 bits (47), Expect = 5.0
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 413 LLVPWASIR 439
LLVPWASIR
Sbjct: 214 LLVPWASIR 188
>GI3392149G gi3392149g LENGTH:900bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 900
Score = 24.0 bits (46), Expect = 6.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3 / +1
Query: 219 CHYLCTCSSSLKYGCNTIR 275
C +LC SSSL C + R
Sbjct: 505 CKHLCVPSSSLLASCTSTR 561
>GI3391763G gi3391763g LENGTH:748bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 748
Score = 24.0 bits (46), Expect = 6.8
Identities = 7/13 (53%), Positives = 9/13 (68%)
Frame = +3 / +1
Query: 219 CHYLCTCSSSLKY 257
C +LC+CS S Y
Sbjct: 301 CRHLCSCSHSATY 339
>GI3391981G gi3391981g LENGTH:818bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 818
Score = 24.0 bits (46), Expect = 6.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2 / -3
Query: 327 TTMNAVFTWQEYEIPMKIVLYCIHTSATMN 238
T+ V EY P+KI+ C HT N
Sbjct: 684 TSYQVVHQPLEYSHPLKILARC*HTDIHAN 595
>CL411CT477CN1074 cl411ct477cn1074 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:1; ESTS:gi14180453; LENGTH:
Length = 786
Score = 24.0 bits (46), Expect = 6.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2 / -1
Query: 38 WLWRTCLKCLRS 73
W WR C C RS
Sbjct: 441 WFWRVCGWCTRS 406
>GI14181506 gi14181506 LENGTH:740bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 740
Score = 24.0 bits (46), Expect = 6.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1 / +1
Query: 334 HREAMS*TPSPCHVASVR 387
HR TPSPCH ++R
Sbjct: 640 HRTPT*PTPSPCHPPTLR 693
>CL1034CT1135CN1918 cl1034ct1135cn1918 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgcm002cB06f.b,m
Length = 680
Score = 24.0 bits (46), Expect = 6.8
Identities = 12/34 (35%), Positives = 15/34 (43%)
Frame = +3 / +2
Query: 471 GHGGLISTYKVSSCYMTSHAFAPLPRFGTTCFDL 572
G GGL S SS + T R G TC ++
Sbjct: 146 GSGGLASARMASSKFGTKAMIVEGGRIGGTCVNV 247
>MGCS009DE07F.B mgcs009dE07f.b LENGTH:465bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 465
Score = 24.0 bits (46), Expect = 6.8
Identities = 7/22 (31%), Positives = 11/22 (49%)
Frame = +3 / +1
Query: 207 RSFGCHYLCTCSSSLKYGCNTI 272
+ GCH TCS++ C +
Sbjct: 43 KQLGCHVTATCSTAKAQFCKDL 108
>MGCS006AG08F.B mgcs006aG08f.b LENGTH:558bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 558
Score = 24.0 bits (46), Expect = 6.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +3
Query: 325 RARHREAMS*TPSPCH 372
RAR R+ T SPCH
Sbjct: 147 RARQRQNCQRTKSPCH 194
>MGNS012AA03F.B mgns012aA03f.b LENGTH:343bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 343
Score = 24.0 bits (46), Expect = 6.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 193 IRHLPGSRPYPQGG 152
++HLPG+RP+ G
Sbjct: 164 LKHLPGARPWTHVG 205
>MGMY004CC05F.B mgmy004cC05f.b LENGTH:416bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 416
Score = 24.0 bits (46), Expect = 6.8
Identities = 10/32 (31%), Positives = 11/32 (34%)
Frame = -2 / -1
Query: 396 SSWPHAGDMARTGSSTHSFPVSSTTMNAVFTW 301
SSWPH M + P T V W
Sbjct: 161 SSWPHDSMMLSMPQPSS*IPSCGTIDRVVLVW 66
>MGCS006DD03F.B mgcs006dD03f.b LENGTH:505bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 505
Score = 24.0 bits (46), Expect = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1 / +2
Query: 535 PHCPDSAP 558
PHCP SAP
Sbjct: 14 PHCPTSAP 37
>GI2537320G gi2537320g LENGTH:951bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 951
Score = 24.0 bits (46), Expect = 6.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2 / -2
Query: 38 WLWRTCLKCLRS 73
W W TC+ LRS
Sbjct: 152 WFWITCVSVLRS 117
>GI3391867G gi3391867g LENGTH:757bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 757
Score = 24.0 bits (46), Expect = 6.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3 / +2
Query: 162 GYGREPGKWRMEL*RRSFGCH 224
G+GR G WR+E ++ G H
Sbjct: 263 GHGRRQGGWRVEARVQAQGGH 325
>GI3391480G gi3391480g LENGTH:925bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 925
Score = 24.0 bits (46), Expect = 6.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 482 FNLYLQGVILLYDFPCICPI 541
+N Y+ G+I++ D C C +
Sbjct: 857 YNFYI*GIIVM*DLLCDCDV 916
>MGCS009DE04F.B mgcs009dE04f.b LENGTH:354bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 354
Score = 24.0 bits (46), Expect = 6.8
Identities = 14/38 (36%), Positives = 17/38 (43%)
Frame = +1 / +2
Query: 124 TSYCNKRRVILLEDTAENLANGEWNFNADLLAATTSAP 237
+S+C R IL+ TA N W LLA S P
Sbjct: 86 SSHCKVRDCILVHSTALAPRNSIWLSANQLLATYGSWP 199
>CL20CT26CN84 cl20ct26cn84 COVERAGE:0.97; CRAWID: 1; TOTAL_ESTS:26;
ESTS:gi14181560,gi14181292
Length = 1300
Score = 24.0 bits (46), Expect = 6.8
Identities = 6/14 (42%), Positives = 9/14 (63%)
Frame = +2 / +2
Query: 395 DWPINDLLVPWASI 436
DW D L+PW ++
Sbjct: 1223 DWKTGDPLIPWKAV 1264
>GI2537263G gi2537263g LENGTH:510bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 510
Score = 23.5 bits (45), Expect = 9.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2 / -2
Query: 134 ATSVVLSSLRIRPRTWQMANG 196
ATS++ +S RP W+M G
Sbjct: 311 ATSILFASSISRPVRWRMKTG 249
>GI14181227 gi14181227 LENGTH:665bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 665
Score = 23.5 bits (45), Expect = 9.4
Identities = 10/22 (45%), Positives = 11/22 (49%)
Frame = +3 / +2
Query: 249 LKYGCNTIRFSSEFRILAK*RQ 314
L GC T S R LA *R+
Sbjct: 41 LSSGCQTTAPSQRCRCLAS*RR 106
>CL773CT862CN1636 cl773ct862cn1636 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgmy001dB05f.b,mgm
Length = 517
Score = 23.5 bits (45), Expect = 9.4
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2 / -2
Query: 237 RCRGSGSQKICVKVPFAICQVLGRILKED 151
RC + S +CV + F +C ++ L +D
Sbjct: 279 RCVMTASSLMCV*MWFGVCGIISARLGDD 193
>CL999CT1100CN1882 cl999ct1100cn1882 COVERAGE:0.97; CRAWID: 1;
TOTAL_ESTS:10; ESTS:mgcm001cG12f.b,m
Length = 802
Score = 23.5 bits (45), Expect = 9.4
Identities = 13/29 (44%), Positives = 14/29 (47%)
Frame = +1 / -3
Query: 358 PSPCHVASVRPR*LANQRSTCPLGKYTLR 444
P PCH ASV R L S P + T R
Sbjct: 665 PLPCHRASVFERHLRTPTSGIPECERTKR 579
>CL892CT991CN1769 cl892ct991cn1769 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgmy004aF08f.b,mgm
Length = 539
Score = 23.5 bits (45), Expect = 9.4
Identities = 7/15 (46%), Positives = 12/15 (79%)
Frame = +1 / -1
Query: 118 DKTSYCNKRRVILLE 162
DKTS+CN +I+++
Sbjct: 128 DKTSFCNPESLIVVD 84
>MGNS010BD01F.B mgns010bD01f.b LENGTH:419bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 419
Score = 23.5 bits (45), Expect = 9.4
Identities = 11/23 (47%), Positives = 13/23 (55%)
Frame = -2 / +2
Query: 378 GDMARTGSSTHSFPVSSTTMNAV 310
G + + SST P SS TM AV
Sbjct: 44 GPRSCSTSSTRPHPNSSITMAAV 112
>MGCS006CB08F.B mgcs006cB08f.b LENGTH:490bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 490
Score = 23.5 bits (45), Expect = 9.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2 / +1
Query: 422 PWASIRSGNPGMQHLVRTW 478
PW SIR +P + R+W
Sbjct: 271 PWCSIRHNSPMLPAR*RSW 327
>CL991CT1092CN1874 cl991ct1092cn1874 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgcm001cB11f.b,mg
Length = 532
Score = 23.5 bits (45), Expect = 9.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1 / -3
Query: 112 IMDKTSYCNKRRVILLEDTAENLANG 189
++ K S C+ RRV E+ + NG
Sbjct: 389 MVKKKSTCSDRRVTFFEECEALIQNG 312
>MGNS008BG10F.B mgns008bG10f.b LENGTH:436bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 436
Score = 23.5 bits (45), Expect = 9.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1 / -1
Query: 448 SWYAAFS*DMEV*SLPTRCHPAI 516
SWY + S V +P C P I
Sbjct: 154 SWYVSLSWRSSVTKIPRLCSPGI 86
>MGCS010CB12F.B mgcs010cB12f.b LENGTH:540bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 540
Score = 23.5 bits (45), Expect = 9.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / +2
Query: 411 SLIGQSSWPHAGDMARTGS 355
+LIG W HA + RT S
Sbjct: 152 TLIGTDQWQHAVQLFRTRS 208
>MGAP008CF06F.B mgap008cF06f.b LENGTH:485bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 485
Score = 23.5 bits (45), Expect = 9.4
Identities = 11/38 (28%), Positives = 18/38 (46%)
Frame = -2 / -3
Query: 345 SFPVSSTTMNAVFTWQEYEIPMKIVLYCIHTSATMNRC 232
++ V+S T+NA EYE ++L M+ C
Sbjct: 159 TYLVTSRTVNANTPQCEYEFQAPLLLLSRRRLCPMHAC 46
>MGNS007DH11F.B mgns007dH11f.b LENGTH:364bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 364
Score = 23.5 bits (45), Expect = 9.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 348 HSFPVSSTTMNAV 310
H PVSS+ MNAV
Sbjct: 178 HLIPVSSSAMNAV 216
>MGCS009BD11F.B mgcs009bD11f.b LENGTH:365bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 365
Score = 23.5 bits (45), Expect = 9.4
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = +2 / +3
Query: 521 FPCICPIAPIRHHLFRL 571
FP P P+R HLF L
Sbjct: 96 FPLHFPPCPLRSHLFSL 146
>MGCS009AA06F.B mgcs009aA06f.b LENGTH:522bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 522
Score = 23.5 bits (45), Expect = 9.4
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3 / -1
Query: 468 LGHGGLISTYKVSSCYMTSHAFAPLPRFGTTCFDL 572
+GH S + VS C + S P G CF L
Sbjct: 297 MGHFSGRSVWWVSMCALRSLKILPHSGCGQRCFSL 193
>CL1191CT1294CN2083 cl1191ct1294cn2083 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgcm007bA10f.b,m
Length = 660
Score = 23.5 bits (45), Expect = 9.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 417 SRSLIGQSSWPHAGDMARTGS 355
+ +L ++SWP + MAR+ S
Sbjct: 561 TETLRSRTSWPESSAMARSAS 499
>GI2537322G gi2537322g LENGTH:2750bp ; DIRECTION:0 ; CLONE: n/a ;
CLONELIB: n/a ; TISSUE:[]
Length = 2750
Score = 22.6 bits (43), Expect(2) = 9.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 181 ANGEWNFNADLLA 219
+NG W + ADL+A
Sbjct: 2524 SNGNWLYQADLVA 2562
Score = 18.5 bits (34), Expect(2) = 9.9
Identities = 9/21 (42%), Positives = 10/21 (46%)
Frame = +2 / +2
Query: 47 RTCLKCLRSPLQNYLTPNSKL 109
R C +C R N LT S L
Sbjct: 2456 RRC*ECFRGHWCNSLTTGSWL 2518
Database: /phillip/Ncr/Mgr_IFAFSGB_nr
Posted date: Mar 22, 2002 5:31 PM
Number of letters in database: 2,543,711
Number of sequences in database: 4717
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4269157
Number of Sequences: 4717
Number of extensions: 66479
Number of successful extensions: 2693
Number of sequences better than 10.0: 93
length of query: 192
length of database: 847,903
effective HSP length: 39
effective length of query: 152
effective length of database: 663,940
effective search space: 100918880
effective search space used: 100918880
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 45 (23.5 bits)