TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1606_E02_I0
4ZS5.seq
(395 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.664 Ncr_G_C2.664 47 9e-06
NCR_G_C2.023 Ncr_G_C2.023 34 0.068
NCR_G_C2.307 Ncr_G_C2.307 34 0.068
NCR_G_C2.203 Ncr_G_C2.203 30 0.87
NCR_G_C2.169 Ncr_G_C2.169 30 1.2
NCR_G_C2.538 Ncr_G_C2.538 30 1.2
NCR_G_C2.329 Ncr_G_C2.329 30 1.2
NCR_G_C2.743 Ncr_G_C2.743 29 1.6
NCR_G_C2.444 Ncr_G_C2.444 29 1.6
NCR_G_C2.378 Ncr_G_C2.378 29 2.3
NCR_G_C2.151 Ncr_G_C2.151 29 2.3
NCR_G_C2.568 Ncr_G_C2.568 27 3.0
NCR_G_C2.574 Ncr_G_C2.574 29 3.1
NCR_G_C2.202 Ncr_G_C2.202 29 3.1
NCR_G_C2.271 Ncr_G_C2.271 28 4.3
NCR_G_C2.727 Ncr_G_C2.727 28 4.3
NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G... 28 4.3
NCR_G_C2.380 Ncr_G_C2.380 28 4.3
NCR_G_C2.128 Ncr_G_C2.128 28 4.3
NCR_G_C2.592 Ncr_G_C2.592 28 4.3
NCR_G_C2.059 Ncr_G_C2.059 28 5.8
NCR_G_C2.332 Ncr_G_C2.332 28 5.8
NCR_G_C2.655 Ncr_G_C2.655 28 5.8
NCR_G_C2.764 Ncr_G_C2.764 28 5.8
NCR_G_C2.714 Ncr_G_C2.714 28 5.8
NCR_G_C2.653 Ncr_G_C2.653 28 5.8
NCR_G_C2.489 Ncr_G_C2.489 28 5.8
NCR_G_C2.163 Ncr_G_C2.163 28 5.8
NCR_G_C2.327 Ncr_G_C2.327 28 5.8
NCR_G_C2.367 Ncr_G_C2.367 28 5.8
NCR_G_C2.357 Ncr_G_C2.357 28 5.8
NCR_G_C2.322 Ncr_G_C2.322 28 5.8
NCR_G_C2.441 Ncr_G_C2.441 28 5.8
NCR_G_C2.541 Ncr_G_C2.541 26 7.8
NCR_G_C2.707 Ncr_G_C2.707 23 8.0
NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G... 27 8.0
NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of Ncr_G... 27 8.0
NCR_G_C2.147 Ncr_G_C2.147 27 8.0
NCR_G_C2.057 Ncr_G_C2.057 27 8.0
NCR_G_C2.227 Ncr_G_C2.227 27 8.0
NCR_G_C2.546 Ncr_G_C2.546 27 8.0
NCR_G_C2.560 Ncr_G_C2.560 27 8.0
>NCR_G_C2.664 Ncr_G_C2.664
Length = 54200
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 44933 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44829
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 44993 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44889
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 44969 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44865
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 44957 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44853
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 44981 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44877
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 45017 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44913
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 45005 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44901
Score = 46.9 bits (96), Expect = 9e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 44945 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44841
Score = 45.5 bits (93), Expect = 2e-05
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
+ E +D+ KDE K+E KD KDE KDE K + K E
Sbjct: 45029 EEEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44925
Score = 45.0 bits (92), Expect = 3e-05
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE + +KE
Sbjct: 44909 KDEKKDEKKDEKKDEKKDEKKDEKKDEKTEEKEKE 44805
Score = 45.0 bits (92), Expect = 3e-05
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K E +D+ KDE K+E KD KDE KDE K + +E
Sbjct: 44921 KDEKKDEKKDEKKDEKKDEKKDEKKDEKKDEKTEE 44817
Score = 42.3 bits (86), Expect = 2e-04
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2 / -1
Query: 8 EPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
E ++ KDE K+E KD KDE KDE K + K E
Sbjct: 45035 EAEEEKKDEKKDEKKDEKKDEKKDEKKDEKKDE 44937
Score = 36.3 bits (73), Expect = 0.014
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTD 94
K E +D+ KDE K+E KD KDE +E + +
Sbjct: 44897 KDEKKDEKKDEKKDEKKDEKKDEKTEEKEKE 44805
Score = 35.9 bits (72), Expect = 0.019
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2 / -1
Query: 20 QPKDEPKEELKDNLKDETKDEPKTDSKKE 106
+ ++E K+E KD KDE KDE K + K E
Sbjct: 45035 EAEEEKKDEKKDEKKDEKKDEKKDEKKDE 44949
Score = 33.6 bits (67), Expect = 0.094
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / -1
Query: 32 EPKEELKDNLKDETKDEPKTDSKKE 106
E +EE KD KDE KDE K + K E
Sbjct: 45035 EAEEEKKDEKKDEKKDEKKDEKKDE 44961
Score = 28.6 bits (56), Expect = 3.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K + + KDE + K + K + KDE + + KKE
Sbjct: 45329 KKDEKKNEKDETEAAEKKDEKKDEKDETEAEEKKE 45225
>NCR_G_C2.023 Ncr_G_C2.023
Length = 117328
Score = 34.1 bits (68), Expect = 0.068
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1 / +3
Query: 89 SWVRPWFRP*GCP*VPPLVRPWVDP 15
+++ P+ P* CP PLVRPW +P
Sbjct: 102405 NFLGPYLEP*PCPASGPLVRPWHEP 102479
>NCR_G_C2.307 Ncr_G_C2.307
Length = 85225
Score = 34.1 bits (68), Expect = 0.068
Identities = 13/24 (54%), Positives = 18/24 (74%)
Frame = +2 / -1
Query: 23 PKDEPKEELKDNLKDETKDEPKTD 94
PKD+ KE+L+++LKDE DE D
Sbjct: 51301 PKDDVKEDLQEDLKDELTDELTRD 51230
Score = 31.3 bits (62), Expect = 0.46
Identities = 13/35 (37%), Positives = 21/35 (59%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K + ++ KDE +EL +L+ + KD+P D K E
Sbjct: 51286 KEDLQEDLKDELTDELTRDLEGDLKDKPNEDMKPE 51182
Score = 29.9 bits (59), Expect = 1.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 11 PRDQPKDEPKEELKDNLKDETKDEPKTDSK 100
P+D K++ +E+LKD L DE + + D K
Sbjct: 51301 PKDDVKEDLQEDLKDELTDELTRDLEGDLK 51212
Score = 27.6 bits (54), Expect = 5.8
Identities = 11/35 (31%), Positives = 21/35 (59%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
KHE + + KE +K+++K E ++ DSK++
Sbjct: 51442 KHELEEDLDEGVKEVVKEDVKQELNEDIVEDSKED 51338
>NCR_G_C2.203 Ncr_G_C2.203
Length = 128723
Score = 30.4 bits (60), Expect = 0.87
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +2 / +1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSK 100
KHE ++P++E + D+ E +++PK++S+
Sbjct: 101407 KHESDEKPREEALPKTADDQLKEQQEDPKSESE 101505
Score = 27.2 bits (53), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 35 PKEELKDNLKDETKDEPKTDSKK 103
P +E+KD K E K EP+ +K
Sbjct: 86477 PSDEIKDGDKQEEKKEPELAKRK 86545
>NCR_G_C2.169 Ncr_G_C2.169
Length = 54533
Score = 29.9 bits (59), Expect = 1.2
Identities = 15/39 (38%), Positives = 16/39 (40%)
Frame = -1 / -2
Query: 266 PKSIPLVVAQTSLVHTPNV*DEPLIPPWTSSLTPWTHPL 150
P S PL S T D P +PP T P HPL
Sbjct: 16030 PPSPPLTQTTLSATTTSTSTDHPPLPPGTHHPPPHPHPL 15914
>NCR_G_C2.538 Ncr_G_C2.538
Length = 60272
Score = 29.9 bits (59), Expect = 1.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1 / +2
Query: 251 LVVAQTSLVHTPNV*DEPLIPPWTSSLTPWTHPL 150
L + SL HTP++ PP+ SSLT H L
Sbjct: 55115 LTITSNSLSHTPSLPHHESSPPFFSSLTQPIHNL 55216
>NCR_G_C2.329 Ncr_G_C2.329
Length = 53959
Score = 29.9 bits (59), Expect = 1.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2 / -3
Query: 23 PKDEPKEELKDNLKDETKDEPKTDS 97
P+D PK E+K K DEP T +
Sbjct: 10286 PRDRPKREIKSQQKPWIADEPPTST 10212
>NCR_G_C2.743 Ncr_G_C2.743
Length = 14349
Score = 29.5 bits (58), Expect = 1.6
Identities = 12/31 (38%), Positives = 19/31 (60%)
Frame = -3 / +2
Query: 366 TSIGNTIYLELFGSYSSPSKVNKHTNCPTSI 274
TS+ + ELF + +SPS V+ + N P +I
Sbjct: 13109 TSLRRVSFSELFSAVASPSSVHSNPNPPRNI 13201
>NCR_G_C2.444 Ncr_G_C2.444
Length = 9591
Score = 29.5 bits (58), Expect = 1.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1 / +3
Query: 344 TLSCSGPTVALQK*TSILIVPHPLCEPKSIPLVVAQTSLVH 222
T +C GP++ Q S+ V L P+S L + +SL H
Sbjct: 7860 TSTCPGPSLLAQTPVSVFTVYRLLLLPRSSSLSITASSLSH 7982
>NCR_G_C2.378 Ncr_G_C2.378
Length = 19243
Score = 29.0 bits (57), Expect = 2.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 240 GDYQWYGLGFTQWM 281
GDY W G G T+WM
Sbjct: 8560 GDYLWTGFGETRWM 8601
>NCR_G_C2.151 Ncr_G_C2.151
Length = 130934
Score = 29.0 bits (57), Expect = 2.3
Identities = 12/28 (42%), Positives = 16/28 (56%)
Frame = +2 / +2
Query: 23 PKDEPKEELKDNLKDETKDEPKTDSKKE 106
P +E KEE K+ KDE K+E + E
Sbjct: 93557 PAEEKKEEEKEEKKDEKKEEAAAAAPSE 93640
>NCR_G_C2.568 Ncr_G_C2.568
Length = 267169
Score = 27.2 bits (53), Expect(2) = 3.0
Identities = 12/32 (37%), Positives = 16/32 (49%)
Frame = -1 / -2
Query: 278 PLCEPKSIPLVVAQTSLVHTPNV*DEPLIPPW 183
P C P VA+T L+H P+ + PPW
Sbjct: 237585 PSCSQTP*PSDVAETHLLHQPSGTLQRTPPPW 237490
Score = 18.9 bits (35), Expect(2) = 3.0
Identities = 5/7 (71%), Positives = 7/7 (99%)
Frame = -1 / -1
Query: 194 IPPWTSS 174
IPPW+S+
Sbjct: 237400 IPPWSST 237380
>NCR_G_C2.574 Ncr_G_C2.574
Length = 180542
Score = 28.6 bits (56), Expect = 3.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 293 LIVPHPLCEPKSIP 252
++ PHPLC+P S P
Sbjct: 99874 ILGPHPLCQPSSFP 99915
>NCR_G_C2.202 Ncr_G_C2.202
Length = 148112
Score = 28.6 bits (56), Expect = 3.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / +1
Query: 307 SKQAY*LSHIHCVNPSPYHW*SPK 236
SK Y L HI VNP YH +P+
Sbjct: 62701 SKVGYLLPHIRAVNPLAYHEETPE 62772
Score = 27.6 bits (54), Expect = 5.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3 / -3
Query: 288 CPTSIV*TQVHTIGSRPNFASPYSKC 211
CPT+ V T+VH G NF+ C
Sbjct: 141507 CPTASVQTEVHVAGITGNFSFTTHTC 141430
>NCR_G_C2.271 Ncr_G_C2.271
Length = 96618
Score = 28.1 bits (55), Expect = 4.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1 / +1
Query: 193 ISGSSQTFGVWTSEVWATTNGMDLGSHNGCGTISMLV 303
++GSS+ T+ VW+T G HN G + LV
Sbjct: 74815 LAGSSRCARKTTTPVWSTLTGTSTYLHNLSGLLRRLV 74925
>NCR_G_C2.727 Ncr_G_C2.727
Length = 67009
Score = 28.1 bits (55), Expect = 4.3
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 289 LSHIHCVNPSPY 254
L+H+HC NP+P+
Sbjct: 28525 LTHLHCTNPNPH 28490
>NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G_C2.022
from base 200001
Length = 110000
Score = 28.1 bits (55), Expect = 4.3
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3 / +3
Query: 324 YSSPSKVNKHTNCPTSIV*TQVHTIGSRPN 235
++ P +H CP + T VH++ ++P+
Sbjct: 11451 FTKPHPAREHARCPIKRLDTSVHSLTNQPH 11540
>NCR_G_C2.380 Ncr_G_C2.380
Length = 179343
Score = 28.1 bits (55), Expect = 4.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2 / +1
Query: 8 EPRDQPKDEPKEELKDNLKDETKDEPKTD 94
EPR +P+ +PK E +D+ + E + + K +
Sbjct: 20353 EPRGEPEPQPKAEHEDDPEQEAEPKIKPE 20439
Score = 28.1 bits (55), Expect = 4.3
Identities = 11/35 (31%), Positives = 20/35 (56%)
Frame = +2 / +2
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSKKE 106
K +P+ +PK +PK + K NL+ + K + +E
Sbjct: 22307 KRKPKRKPKRKPKRKSKRNLQPRGARQQKRQAGRE 22411
>NCR_G_C2.128 Ncr_G_C2.128
Length = 227066
Score = 28.1 bits (55), Expect = 4.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 232 EVWATTNGMDLGSHNGCGTI 291
+V A NG++ GSHNG G +
Sbjct: 151712 DVHAAGNGVEGGSHNGAGDV 151653
>NCR_G_C2.592 Ncr_G_C2.592
Length = 186696
Score = 28.1 bits (55), Expect = 4.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2 / -2
Query: 14 RDQPKDEPKEELKDNLKDETKDEPKTD 94
RD+ + + E + LKDE ++EPK++
Sbjct: 37526 RDEDEAHLRYEYESRLKDEDEEEPKSE 37446
>NCR_G_C2.059 Ncr_G_C2.059
Length = 89435
Score = 27.6 bits (54), Expect = 5.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1 / +2
Query: 29 PWVDPWARA 3
PW+DPW RA
Sbjct: 84884 PWIDPWTRA 84910
>NCR_G_C2.332 Ncr_G_C2.332
Length = 41927
Score = 27.6 bits (54), Expect = 5.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 218 PNV*DEPLIPPWT 180
P++ D P+IPPWT
Sbjct: 17362 PSIEDAPVIPPWT 17400
>NCR_G_C2.655 Ncr_G_C2.655
Length = 36062
Score = 27.6 bits (54), Expect = 5.8
Identities = 10/32 (31%), Positives = 17/32 (52%)
Frame = +2 / -2
Query: 17 DQPKDEPKEELKDNLKDETKDEPKTDSKKECR 112
++PK+E K + K++ EPK D E +
Sbjct: 14221 EKPKEEEKPAAAEEAKEDKPAEPKADVATEAK 14126
>NCR_G_C2.764 Ncr_G_C2.764
Length = 54886
Score = 27.6 bits (54), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1 / -3
Query: 269 EPKSIPLVVAQTSLVHTPNV*DEPLIPPWT 180
E ++ PL A+ + H V D+P + PWT
Sbjct: 40403 EGETGPLETAEDIVTHVIAVDDDPSLSPWT 40314
>NCR_G_C2.714 Ncr_G_C2.714
Length = 49289
Score = 27.6 bits (54), Expect = 5.8
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = +3 / -1
Query: 237 LGDYQWYGLGFTQ 275
LG +QWY L F Q
Sbjct: 42809 LGHWQWYWLWFYQ 42771
>NCR_G_C2.653 Ncr_G_C2.653
Length = 89660
Score = 27.6 bits (54), Expect = 5.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / -2
Query: 248 PMVWTWVHTMDVGQLVCLFTFEGLL 322
P VWTW + G LV F +G L
Sbjct: 78160 PFVWTWEGGLPTGGLVDRFLGQGKL 78086
>NCR_G_C2.489 Ncr_G_C2.489
Length = 72191
Score = 27.6 bits (54), Expect = 5.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2 / -1
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEPKTDSK 100
K E +D+ KEE + ++ E K E K +SK
Sbjct: 2768 KKEKKDKKSKTDKEEEEPVVEKEEKAESKKESK 2670
>NCR_G_C2.163 Ncr_G_C2.163
Length = 52618
Score = 27.6 bits (54), Expect = 5.8
Identities = 9/27 (33%), Positives = 13/27 (47%)
Frame = -1 / +2
Query: 98 WNLSWVRPWFRP*GCP*VPPLVRPWVD 18
W W R W+ P P P +R W++
Sbjct: 27164 WMRLWARRWWCPARLPRGPAALRQWIE 27244
>NCR_G_C2.327 Ncr_G_C2.327
Length = 167595
Score = 27.6 bits (54), Expect = 5.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 IVPHPLCEPKSIPLVVAQTSLVHTPNV*DEPLIPP 186
+ P PL +P I + +L+H P + D + PP
Sbjct: 142898 VPPRPLLQPFLITMPSTLLTLIHIPMLVDPLITPP 142794
>NCR_G_C2.367 Ncr_G_C2.367
Length = 88285
Score = 27.6 bits (54), Expect = 5.8
Identities = 12/28 (42%), Positives = 14/28 (49%)
Frame = +2 / +3
Query: 2 KHEPRDQPKDEPKEELKDNLKDETKDEP 85
K EP +P EPK+E L E EP
Sbjct: 3408 KPEPEPKPVSEPKKEKAPELLPEKLPEP 3491
>NCR_G_C2.357 Ncr_G_C2.357
Length = 48218
Score = 27.6 bits (54), Expect = 5.8
Identities = 13/32 (40%), Positives = 16/32 (49%)
Frame = -1 / -1
Query: 353 TLFTLSCSGPTVALQK*TSILIVPHPLCEPKS 258
+L L CSG VAL T+ P P+ P S
Sbjct: 6338 SLHMLRCSGYAVALSTTTTTTTTPPPIHHPSS 6243
>NCR_G_C2.322 Ncr_G_C2.322
Length = 116391
Score = 27.6 bits (54), Expect = 5.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1 / +3
Query: 293 LIVPHPLCEPKSIPLVVAQTSLVHTPNV*DEPLIPPWTS 177
L +P L + + +TS + N+ D PLI P TS
Sbjct: 93756 LHIPRQLGSTRRSRITTPKTSAITPFNLLDPPLITPMTS 93872
>NCR_G_C2.441 Ncr_G_C2.441
Length = 223615
Score = 27.6 bits (54), Expect = 5.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 254 VWTWVHTMDVGQLVCLFTFEGLL*DPN 334
+W+W++ DV V LFT L +P+
Sbjct: 185492 IWSWIYGHDVAWSVTLFTIIPSLREPD 185572
>NCR_G_C2.541 Ncr_G_C2.541
Length = 108788
Score = 26.3 bits (51), Expect(2) = 7.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3 / -3
Query: 360 IGNTIYLELFGSYSSPSKVNKHTNCPTSI 274
IGNT+ L + P N TNCP +I
Sbjct: 98280 IGNTLST*LSSNKHYPKSNNGPTNCPDTI 98194
Score = 18.5 bits (34), Expect(2) = 7.8
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2 / -2
Query: 292 *LSHIHCVNPS 260
*+ I CV PS
Sbjct: 98191 *IGPITCVTPS 98159
>NCR_G_C2.707 Ncr_G_C2.707
Length = 7434
Score = 23.1 bits (44), Expect(2) = 8.0
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = -1 / -2
Query: 197 LIPPWTSSLTPWTHP 153
L+ P LTPWT P
Sbjct: 5036 LLTPSILPLTPWTCP 4992
Score = 22.1 bits (42), Expect(2) = 8.0
Identities = 7/13 (53%), Positives = 8/13 (60%)
Frame = -1 / -2
Query: 53 P*VPPLVRPWVDP 15
P PPL+ PW P
Sbjct: 4904 PPPPPLLPPWAHP 4866
>NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of
Ncr_G_C2.022 from base 400001
Length = 110000
Score = 27.2 bits (53), Expect = 8.0
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = -1 / -1
Query: 338 SCSGPTVALQK*TSILIVPHPLC 270
SCSGP + + + +L+VP P C
Sbjct: 8819 SCSGPRASPSQVSIMLLVPAPQC 8751
>NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of Ncr_G_C2.022
from base 300001
Length = 110000
Score = 27.2 bits (53), Expect = 8.0
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = -1 / -3
Query: 338 SCSGPTVALQK*TSILIVPHPLC 270
SCSGP + + + +L+VP P C
Sbjct: 108819 SCSGPRASPSQVSIMLLVPAPQC 108751
>NCR_G_C2.147 Ncr_G_C2.147
Length = 124885
Score = 27.2 bits (53), Expect = 8.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 199 GSSQTFGVWTSEVWA 243
GS+ TF VWT+ WA
Sbjct: 110741 GSNGTF*VWTATGWA 110785
>NCR_G_C2.057 Ncr_G_C2.057
Length = 66877
Score = 27.2 bits (53), Expect = 8.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1 / -3
Query: 248 VVAQTSLVHTPNV*DEPLIPPWTSSLTPWTHP 153
VVA+ VHT N + PW S THP
Sbjct: 13424 VVARVGRVHTGNGVGHGGVWPWRGSAKAGTHP 13329
>NCR_G_C2.227 Ncr_G_C2.227
Length = 73574
Score = 27.2 bits (53), Expect = 8.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 59 GCP*VPPLVRPW 24
GC *+PPLVR W
Sbjct: 48705 GCS*LPPLVREW 48740
>NCR_G_C2.546 Ncr_G_C2.546
Length = 112644
Score = 27.2 bits (53), Expect = 8.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +2
Query: 77 PWFRP*GCP*VPPLVRPW 24
PW RP*GCP P W
Sbjct: 80273 PWARP*GCPS*APRPSRW 80326
>NCR_G_C2.560 Ncr_G_C2.560
Length = 32286
Score = 27.2 bits (53), Expect = 8.0
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1 / -2
Query: 56 CP*VPPLVRPWVDP 15
C PP RPW P
Sbjct: 31490 CRHQPPSCRPWASP 31449
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 30629287
Number of Sequences: 995
Number of extensions: 450995
Number of successful extensions: 26170
Number of sequences better than 10.0: 42
length of query: 131
length of database: 12,656,439
effective HSP length: 44
effective length of query: 87
effective length of database: 12,612,659
effective search space: 1097301333
effective search space used: 1097301333
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 52 (26.7 bits)