TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1606_F11_K2
2ZS5.seq
(457 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.110 Ncr_G_C2.110 34 0.082
NCR_G_C2.511 Ncr_G_C2.511 33 0.21
NCR_G_C2.225 Ncr_G_C2.225 25 0.55
NCR_G_C2.559 Ncr_G_C2.559 31 0.76
NCR_G_C2.172 Ncr_G_C2.172 31 0.76
NCR_G_C2.523 Ncr_G_C2.523 30 1.0
NCR_G_C2.676 Ncr_G_C2.676 30 1.4
NCR_G_C2.624 Ncr_G_C2.624 30 1.4
NCR_G_C2.134 Ncr_G_C2.134 30 1.4
NCR_G_C2.588 Ncr_G_C2.588 29 2.0
NCR_G_C2.680 Ncr_G_C2.680 29 2.7
NCR_G_C2.592 Ncr_G_C2.592 29 2.7
NCR_G_C2.668 Ncr_G_C2.668 29 2.7
NCR_G_C2.615 Ncr_G_C2.615 29 2.7
NCR_G_C2.219 Ncr_G_C2.219 29 3.7
NCR_G_C2.725 Ncr_G_C2.725 29 3.7
NCR_G_C2.214 Ncr_G_C2.214 29 3.7
NCR_G_C2.521 Ncr_G_C2.521 29 3.7
NCR_G_C2.125 Ncr_G_C2.125 29 3.7
NCR_G_C2.564 Ncr_G_C2.564 29 3.7
NCR_G_C2.700 Ncr_G_C2.700 29 3.7
NCR_G_C2.391 Ncr_G_C2.391 26 4.2
NCR_G_C2.234 Ncr_G_C2.234 28 5.1
NCR_G_C2.042_1 Ncr_G_C2.042_1.seq Continuation (1 of 6) of Ncr_G... 28 5.1
NCR_G_C2.312 Ncr_G_C2.312 28 5.1
NCR_G_C2.236 Ncr_G_C2.236 28 7.0
NCR_G_C2.407 Ncr_G_C2.407 28 7.0
NCR_G_C2.256 Ncr_G_C2.256 28 7.0
NCR_G_C2.083 Ncr_G_C2.083 28 7.0
NCR_G_C2.661 Ncr_G_C2.661 28 7.0
NCR_G_C2.202 Ncr_G_C2.202 28 7.0
NCR_G_C2.101 Ncr_G_C2.101 28 7.0
NCR_G_C2.204 Ncr_G_C2.204 28 7.0
NCR_G_C2.773 Ncr_G_C2.773 28 7.0
NCR_G_C2.137 Ncr_G_C2.137 28 7.0
NCR_G_C2.259 Ncr_G_C2.259 26 8.5
NCR_G_C2.690 Ncr_G_C2.690 27 9.1
NCR_G_C2.672 Ncr_G_C2.672 27 9.6
NCR_G_C2.163 Ncr_G_C2.163 27 9.6
NCR_G_C2.692 Ncr_G_C2.692 27 9.6
NCR_G_C2.164 Ncr_G_C2.164 27 9.6
NCR_G_C2.354 Ncr_G_C2.354 27 9.6
NCR_G_C2.665 Ncr_G_C2.665 27 9.6
NCR_G_C2.487 Ncr_G_C2.487 27 9.6
NCR_G_C2.446 Ncr_G_C2.446 27 9.6
NCR_G_C2.042_5 Ncr_G_C2.042_5.seq Continuation (5 of 6) of Ncr_G... 27 9.6
NCR_G_C2.554 Ncr_G_C2.554 27 9.6
NCR_G_C2.357 Ncr_G_C2.357 27 9.6
NCR_G_C2.373 Ncr_G_C2.373 27 9.6
NCR_G_C2.687 Ncr_G_C2.687 27 9.6
NCR_G_C2.194 Ncr_G_C2.194 27 9.6
NCR_G_C2.508 Ncr_G_C2.508 27 9.6
NCR_G_C2.085 Ncr_G_C2.085 27 9.6
NCR_G_C2.896 Ncr_G_C2.896 27 9.6
>NCR_G_C2.110 Ncr_G_C2.110
Length = 102633
Score = 34.1 bits (68), Expect = 0.082
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 215 YLLARPVPGNISHHSTVQ 162
YLLA PVP N+SHH +Q
Sbjct: 26249 YLLASPVPPNVSHHGQLQ 26302
Score = 28.1 bits (55), Expect = 5.1
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -3 / -1
Query: 179 HHSTVQGNQPPRSVYNASFDGVGSSRSDERVTV 81
+H + G QPP YN + D + E V
Sbjct: 78297 NHGHLAGQQPPLLPYNPNVDFPSEDLARENFAV 78199
>NCR_G_C2.511 Ncr_G_C2.511
Length = 62614
Score = 32.7 bits (65), Expect = 0.21
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -1 / -2
Query: 397 AVQTEVPQTDNFIFGETQAISLSGLKKKFLEWQHGRTVIGVAYSARNDYIIL 242
A E+P + I A + S L +++ W+H +T + Y+ N Y ++
Sbjct: 10683 ATGLELPPVEKLIVNYGDATNTSWLDERYHVWRHEQTGAAIGYAEDNGYALV 10528
>NCR_G_C2.225 Ncr_G_C2.225
Length = 107875
Score = 25.3 bits (49), Expect(2) = 0.55
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3 / -1
Query: 203 RPVPGNISHHSTVQGNQPPRSVYNASFDGVGSSR 102
RP ++SHH+ + PPR A D + S++
Sbjct: 73735 RPREADVSHHANPSTSLPPRRRLLADSDMMTSAQ 73634
Score = 24.0 bits (46), Expect(2) = 0.55
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 103 DLTNELQYGAHLQPWCG 53
D+ +E+ A + PWCG
Sbjct: 73528 DIDHEVDSTAMMLPWCG 73478
>NCR_G_C2.559 Ncr_G_C2.559
Length = 54441
Score = 30.8 bits (61), Expect = 0.76
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2 / +3
Query: 14 C*WQRSLGDSRGQAAPGLKMCAIL*LVRQ 100
C*WQR L R ++P + +C I+ RQ
Sbjct: 3699 C*WQRDLCHQRISSSPSINLCTIIAQDRQ 3785
Score = 29.0 bits (57), Expect = 2.7
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +2 / +3
Query: 179 EICCLAQVEPVNMVEEDSKVSQDDIVVTSRVCDANHSS 292
E+ CL ++ NM+ + + +V + CDA+H +
Sbjct: 31755 EVDCLLELHAGNMMTQVKSGAPSPAIVVAMACDADHGA 31868
>NCR_G_C2.172 Ncr_G_C2.172
Length = 97267
Score = 30.8 bits (61), Expect = 0.76
Identities = 16/45 (35%), Positives = 20/45 (43%)
Frame = +1 / +1
Query: 1 VPLVLLMATEPWRFSRPGRTRAEDVRHTVTRSSDRELPTPSKLAL 135
VPL+ P SRP T V ++ SSD + P P L L
Sbjct: 22813 VPLLFPHLPSPISLSRPIHTTTTPVNRKMSYSSDEDQPDPELLEL 22947
>NCR_G_C2.523 Ncr_G_C2.523
Length = 130581
Score = 30.4 bits (60), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3 / -3
Query: 200 PVPGNISHHSTVQGNQPPRSVYN 132
PVPG++ H G PP S++N
Sbjct: 22069 PVPGDLLPHELDHGQSPPTSLFN 22001
>NCR_G_C2.676 Ncr_G_C2.676
Length = 48155
Score = 29.9 bits (59), Expect = 1.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1 / +3
Query: 73 HLQPWCGLAARIAKAPLPLTER 8
HL+P C LA+R PLP ER
Sbjct: 6768 HLRPRCRLASRWTSEPLPREER 6833
>NCR_G_C2.624 Ncr_G_C2.624
Length = 145122
Score = 29.9 bits (59), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (53%)
Frame = -3 / +2
Query: 251 YHPERLWSLLQPYLLARPVPGNISHHSTVQG 159
Y R + L +LL P PGN++ HST G
Sbjct: 64265 YPSRRYFHKLPTHLLWGPGPGNLTLHSTASG 64357
>NCR_G_C2.134 Ncr_G_C2.134
Length = 36749
Score = 29.9 bits (59), Expect = 1.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3 / +3
Query: 257 RLYHPERLWSLLQPYLLARPVPGNISHHST 168
R Y PE S PY+ RP P SH ++
Sbjct: 29271 RKYSPEPRKSCAHPYVYRRPPPSRASHETS 29360
>NCR_G_C2.588 Ncr_G_C2.588
Length = 154785
Score = 29.5 bits (58), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1 / +3
Query: 22 ATEPWRFSRPGRTRAEDVRHTVTRSSDRELPTPSK 126
+T P+ F P + +R T T+S P PSK
Sbjct: 18678 STHPFPFPNPVSYNSNHMRETQTQSRPGRCPKPSK 18782
>NCR_G_C2.680 Ncr_G_C2.680
Length = 7881
Score = 29.0 bits (57), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (58%)
Frame = +3 / -3
Query: 276 TPITVRPCCHSRNFFLRPLRDIACVSP 356
T + + P CHS+ FLR R ++C P
Sbjct: 1882 TTLDISPNCHSKFSFLRK*RAMSCFLP 1802
>NCR_G_C2.592 Ncr_G_C2.592
Length = 186696
Score = 29.0 bits (57), Expect = 2.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2 / +3
Query: 74 CAIL*LVRQIENCQPHQSSHCKHFAEVDCLGLL 172
C ++ R++ Q H+S C +VDCL L
Sbjct: 184542 CGLIYTARKLRTYQRHRSLRCDGDGDVDCLSNL 184640
>NCR_G_C2.668 Ncr_G_C2.668
Length = 78107
Score = 29.0 bits (57), Expect = 2.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1 / +3
Query: 4 PLVLLMATEPWRFSRPGRTRAEDVRHTVTRSSDRELPTPS 123
P L+ P R +RPG TR + T S LPTP+
Sbjct: 24153 PTSLVSRPTPARLTRPGSTRTTPMPTT*PSSGISWLPTPT 24272
>NCR_G_C2.615 Ncr_G_C2.615
Length = 130067
Score = 29.0 bits (57), Expect = 2.7
Identities = 10/24 (41%), Positives = 15/24 (61%)
Frame = -3 / +2
Query: 116 VGSSRSDERVTVWRTSSALVRPGR 45
V S+ SD R+ +WR S +R G+
Sbjct: 87794 VASAGSDGRIRIWRLESGDLRVGK 87865
>NCR_G_C2.219 Ncr_G_C2.219
Length = 282514
Score = 28.6 bits (56), Expect = 3.7
Identities = 12/34 (35%), Positives = 15/34 (43%)
Frame = +3 / -3
Query: 279 PITVRPCCHSRNFFLRPLRDIACVSPKMKLSVWG 380
P T P CHS FL L + +P M+ W
Sbjct: 44186 PCTRYPRCHSYLKFLNILLHLRTFNPNMRSRTWQ 44085
>NCR_G_C2.725 Ncr_G_C2.725
Length = 74583
Score = 28.6 bits (56), Expect = 3.7
Identities = 10/35 (28%), Positives = 20/35 (56%)
Frame = -1 / -2
Query: 457 VITRSINLPNPSDLIKTYEFAVQTEVPQTDNFIFG 353
+I +++ P+P+ L Y+F Q +V + +FG
Sbjct: 35522 LIKANLSTPSPTPLSALYQFTGQLDVHEPGKMVFG 35418
>NCR_G_C2.214 Ncr_G_C2.214
Length = 116813
Score = 28.6 bits (56), Expect = 3.7
Identities = 14/32 (43%), Positives = 17/32 (52%)
Frame = +1 / +1
Query: 37 RFSRPGRTRAEDVRHTVTRSSDRELPTPSKLA 132
RFS+ DVRH R S E+P PS L+
Sbjct: 106618 RFSQWNGAGVIDVRHEPLRDSLAEIPPPSALS 106713
>NCR_G_C2.521 Ncr_G_C2.521
Length = 150662
Score = 28.6 bits (56), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (49%)
Frame = -2 / -1
Query: 120 WGWQFSI*RTSYSMAHIFSPGAAWPRESPR 31
W W+ S RT + + H + G W R S R
Sbjct: 86111 WLWRRSWKRTGFGVEHFLAVGEGWVRISNR 86022
>NCR_G_C2.125 Ncr_G_C2.125
Length = 138790
Score = 28.6 bits (56), Expect = 3.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3 / -2
Query: 200 PVPGNISHHSTVQGNQPP 147
P P + SHH + G+QPP
Sbjct: 45618 PTPSSTSHH*STAGSQPP 45565
>NCR_G_C2.564 Ncr_G_C2.564
Length = 150940
Score = 28.6 bits (56), Expect = 3.7
Identities = 10/36 (27%), Positives = 16/36 (43%)
Frame = -1 / -3
Query: 304 WQHGRTVIGVAYSARNDYIILRDFGVFFNHIYWLDL 197
W GRTV AR +++++ G W D+
Sbjct: 103646 WGSGRTVSSQGSDARREWVVMLQLGHSVEEAPWFDM 103539
>NCR_G_C2.700 Ncr_G_C2.700
Length = 30638
Score = 28.6 bits (56), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3 / +1
Query: 87 NSFVRSRTANPIKARIVNTSRRLIALDC*VMRY 185
NS++R+R + PI A +V I L+ + RY
Sbjct: 7222 NSYIRTRLSFPIAASLVFIENHQIVLNPYISRY 7320
>NCR_G_C2.391 Ncr_G_C2.391
Length = 68325
Score = 26.3 bits (51), Expect(2) = 4.2
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3 / -2
Query: 245 PERLWSLLQPYLLARPVPGNISHHSTVQGNQPPRSVYNASFDGVGSS 105
P +SL P L+RP P S V PPR S G+ S
Sbjct: 40547 PTSWFSLALPTFLSRPWPQVDMESSQVLPTLPPRHASRPSSFGIKES 40407
Score = 19.8 bits (37), Expect(2) = 4.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2 / -3
Query: 63 PGAAWPRESPRLRC 22
PG A R + RL C
Sbjct: 40396 PGDAGSRFARRLDC 40355
>NCR_G_C2.234 Ncr_G_C2.234
Length = 40564
Score = 28.1 bits (55), Expect = 5.1
Identities = 11/28 (39%), Positives = 16/28 (56%)
Frame = +3 / +1
Query: 84 CNSFVRSRTANPIKARIVNTSRRLIALD 167
C+ VRS T++PI+ + R L A D
Sbjct: 36247 CSGLVRSSTSDPIQQGRLLGGRALAASD 36330
>NCR_G_C2.042_1 Ncr_G_C2.042_1.seq Continuation (1 of 6) of Ncr_G_C2.042
from base 1
Length = 110000
Score = 28.1 bits (55), Expect = 5.1
Identities = 10/32 (31%), Positives = 16/32 (49%)
Frame = -2 / -1
Query: 456 SLHGQSIYQTRRISSRHMSSRFKPKFPKQTIS 361
+LH + RR RH+ S ++P P + S
Sbjct: 15902 ALHCSKVCANRRSQMRHLGSMYRPSLPAPSSS 15807
>NCR_G_C2.312 Ncr_G_C2.312
Length = 102336
Score = 28.1 bits (55), Expect = 5.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3 / +2
Query: 147 RRLIALDC*VMRYVAWHRSSQ*IWLKK 227
RR I L +RY+ W +SS * WL K
Sbjct: 84230 RRGILLRTGGVRYIYWRQSSY*SWLSK 84310
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 27.6 bits (54), Expect = 7.0
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3 / +1
Query: 212 LLARPVPGNISHHSTVQGNQPPRSVYNASFDGVGSSRSDERVTVWRTSS 66
+L+RP PG S ST + + PR S S RS R V T S
Sbjct: 158839 ILSRPTPGRSSPRSTRRSWRRPRGRLRPSRTRRPSRRSSMRPHVCSTRS 158985
>NCR_G_C2.407 Ncr_G_C2.407
Length = 67558
Score = 27.6 bits (54), Expect = 7.0
Identities = 11/35 (31%), Positives = 20/35 (56%)
Frame = -2 / +2
Query: 450 HGQSIYQTRRISSRHMSSRFKPKFPKQTISSSERH 346
HG+ ++ R S + +S+ F K KQ +S++H
Sbjct: 25241 HGRQSWEALRSSLQTISNPFAKKDHKQKKKNSQQH 25345
>NCR_G_C2.256 Ncr_G_C2.256
Length = 141304
Score = 27.6 bits (54), Expect = 7.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2 / +1
Query: 224 EDSKVSQDDIVVTSRVCDANHSSTVLPLKEFLL 322
E ++ DD++V + +HS +L LK F L
Sbjct: 130192 ETQRLPDDDVIVVDNMGVGHHSRWMLSLKRFWL 130290
>NCR_G_C2.083 Ncr_G_C2.083
Length = 123429
Score = 27.6 bits (54), Expect = 7.0
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = -2 / -2
Query: 87 YSMAHIFSPGAAWPRESPRLRCH 19
Y H +PG AW R P +CH
Sbjct: 59300 YPQQHPGTPGDAWGRYRPMDQCH 59232
>NCR_G_C2.661 Ncr_G_C2.661
Length = 81294
Score = 27.6 bits (54), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (56%)
Frame = -3 / -2
Query: 158 NQPPRSVYNASFDGVGSSRSDERVTVWR 75
N + V++ + S RSDER TVWR
Sbjct: 31187 NNNTQLVHSTTRRQTRSRRSDERATVWR 31104
Score = 27.2 bits (53), Expect = 9.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 194 AQVEPVNMVEEDSKVSQDDIVVTSRVCDANHSSTVL 301
+ + P + + +++ D +VV R+C A +VL
Sbjct: 52640 SSIRPWSQLSRSFRITADQLVVVLRLCRALRVLSVL 52747
>NCR_G_C2.202 Ncr_G_C2.202
Length = 148112
Score = 27.6 bits (54), Expect = 7.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3 / -2
Query: 233 WSLLQPYLLARPVPGNISHHSTVQGNQPPRS 141
W + + LL P+P S HS Q + PPR+
Sbjct: 67303 WYV*RAPLLLLPLPSLRSFHSVSQTSSPPRA 67211
>NCR_G_C2.101 Ncr_G_C2.101
Length = 209184
Score = 27.6 bits (54), Expect = 7.0
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +3 / +2
Query: 285 TVRPCCHSRNFFLRPLR 335
T RPCCH+ N L P R
Sbjct: 36914 TCRPCCHAWNHRLSPNR 36964
>NCR_G_C2.204 Ncr_G_C2.204
Length = 73435
Score = 27.6 bits (54), Expect = 7.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / -3
Query: 75 HIFSPGAAWPRESPRLRCH*QNER 4
H +PG PR+ PRL H*Q R
Sbjct: 28712 HHQAPGRQGPRQLPRLWLH*QGPR 28641
>NCR_G_C2.773 Ncr_G_C2.773
Length = 40580
Score = 27.6 bits (54), Expect = 7.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3 / -2
Query: 270 YATPITVRPCCHSRNF 317
Y P +RPCC NF
Sbjct: 33385 YGVPHALRPCCSKNNF 33338
>NCR_G_C2.137 Ncr_G_C2.137
Length = 19991
Score = 27.6 bits (54), Expect = 7.0
Identities = 9/26 (34%), Positives = 12/26 (45%)
Frame = -2 / -3
Query: 186 HISSLNSPRQSTSAKCLQCEL*WGWQ 109
H+ L + + S C C *WGW
Sbjct: 6558 HVGVLGTAELAISGCCCYCCC*WGWY 6481
>NCR_G_C2.259 Ncr_G_C2.259
Length = 185660
Score = 25.8 bits (50), Expect(2) = 8.5
Identities = 9/22 (40%), Positives = 14/22 (62%)
Frame = +2 / -2
Query: 20 WQRSLGDSRGQAAPGLKMCAIL 85
W++ LG RG + G +MC+ L
Sbjct: 23704 WRQGLGIGRGWPSKGKRMCSPL 23639
Score = 18.9 bits (35), Expect(2) = 8.5
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +3 / -2
Query: 72 CAPYCNSF 95
C+P C SF
Sbjct: 23650 CSPLCRSF 23627
>NCR_G_C2.690 Ncr_G_C2.690
Length = 112273
Score = 26.7 bits (52), Expect(2) = 9.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3 / +1
Query: 236 LWSLLQPYLLARPVPGNISHH 174
LW LL+P P+ ++ HH
Sbjct: 20110 LWQLLEPLNFLHPLHDSVKHH 20172
Score = 18.0 bits (33), Expect(2) = 9.1
Identities = 6/14 (42%), Positives = 7/14 (49%)
Frame = -2 / +2
Query: 69 FSPGAAWPRESPRL 28
+ P AW E RL
Sbjct: 20213 YRPSLAWL*EKHRL 20254
>NCR_G_C2.672 Ncr_G_C2.672
Length = 83703
Score = 27.2 bits (53), Expect = 9.6
Identities = 11/27 (40%), Positives = 13/27 (47%)
Frame = -3 / +1
Query: 113 GSSRSDERVTVWRTSSALVRPGRENRQ 33
G RS R+ +WR S GR RQ
Sbjct: 72421 GRGRSGLRIRIWRERSEETCRGRSLRQ 72501
>NCR_G_C2.163 Ncr_G_C2.163
Length = 52618
Score = 27.2 bits (53), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = -3 / -3
Query: 248 HPERLWSLLQPYLLARPVPGNIS 180
H + L L QP LL +P+P ++S
Sbjct: 45728 HFDLLQLLSQPLLLPQPLPHHLS 45660
>NCR_G_C2.692 Ncr_G_C2.692
Length = 31530
Score = 27.2 bits (53), Expect = 9.6
Identities = 15/47 (31%), Positives = 19/47 (39%)
Frame = +2 / +2
Query: 233 KVSQDDIVVTSRVCDANHSSTVLPLKEFLLEAT*RYRLCLSEDEIVC 373
K DD + R C S +E+LL RYR E E+ C
Sbjct: 21815 KTVPDDCYLLDRCCCPRLGSDGHEWREYLLSQLLRYRRRHCEGEVAC 21955
>NCR_G_C2.164 Ncr_G_C2.164
Length = 75564
Score = 27.2 bits (53), Expect = 9.6
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = -2 / -1
Query: 66 SPGAAWPRESPRLRCH*QNERN 1
+P AW ESPRLR +R+
Sbjct: 57582 APAGAWQNESPRLRTPSDQQRH 57517
>NCR_G_C2.354 Ncr_G_C2.354
Length = 29520
Score = 27.2 bits (53), Expect = 9.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2 / -3
Query: 287 SSTVLPLKEFLLEAT*RYRLCL 352
S V+PLKEFLLE R L L
Sbjct: 11083 SPQVIPLKEFLLECILRMMLTL 11018
>NCR_G_C2.665 Ncr_G_C2.665
Length = 25552
Score = 27.2 bits (53), Expect = 9.6
Identities = 9/24 (37%), Positives = 14/24 (57%)
Frame = -2 / -3
Query: 408 HMSSRFKPKFPKQTISSSERHRRY 337
H ++ F P P ++S+ER RY
Sbjct: 11726 HCATPFSPLSPSVNVTSAERASRY 11655
>NCR_G_C2.487 Ncr_G_C2.487
Length = 71499
Score = 27.2 bits (53), Expect = 9.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2 / +3
Query: 152 VDCLGLLSDEICCLAQVEPVNMV 220
VDCL L++ CC A +E +V
Sbjct: 34302 VDCLSLVTSSSCCNAFMEAAEVV 34370
>NCR_G_C2.446 Ncr_G_C2.446
Length = 145200
Score = 27.2 bits (53), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (56%)
Frame = +1 / -1
Query: 61 RAEDVRHTVTRSSDRELPTPS 123
RA V+HT R DR P PS
Sbjct: 61623 RAHPVKHTRARQFDRTQPNPS 61561
>NCR_G_C2.042_5 Ncr_G_C2.042_5.seq Continuation (5 of 6) of Ncr_G_C2.042
from base 400001
Length = 110000
Score = 27.2 bits (53), Expect = 9.6
Identities = 10/24 (41%), Positives = 12/24 (49%)
Frame = +3 / -2
Query: 54 PHQG*RCAPYCNSFVRSRTANPIK 125
PH G R CN + R R+ P K
Sbjct: 75199 PHDGNRAGV*CNRWFRDRSCEPYK 75128
>NCR_G_C2.554 Ncr_G_C2.554
Length = 25588
Score = 27.2 bits (53), Expect = 9.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3 / -1
Query: 255 SLRAEYATPITVRPCCHSRNFFLRPLRDIACVSPKMK 365
SL A AT + PCC RPL I P ++
Sbjct: 21331 SLTATAATATAMSPCCSGEKQKQRPLSSIPPTRPFLR 21221
>NCR_G_C2.357 Ncr_G_C2.357
Length = 48218
Score = 27.2 bits (53), Expect = 9.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 360 SSERHRRYL*VASRRNSLSGNTV 292
S ER R+Y+* SRR+ LS ++V
Sbjct: 4409 SVERRRQYM*ARSRRSGLSVSSV 4477
>NCR_G_C2.373 Ncr_G_C2.373
Length = 152539
Score = 27.2 bits (53), Expect = 9.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3 / +1
Query: 200 PVPGNISHHSTVQGNQPPRSVYNAS 126
P PG+I++++ ++PP VY+ S
Sbjct: 120916 PRPGDINNNNNANNSRPPCRVYSRS 120990
>NCR_G_C2.687 Ncr_G_C2.687
Length = 148317
Score = 27.2 bits (53), Expect = 9.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2 / -1
Query: 423 RISSRHMSSRFKPKFPKQTISSSERHRRYL*VASRR 316
RISSR ++ R + + I+S + +R+Y+ +SRR
Sbjct: 148122 RISSRKINKRNSKRRSSRRINSRKINRKYIKRSSRR 148015
>NCR_G_C2.194 Ncr_G_C2.194
Length = 74501
Score = 27.2 bits (53), Expect = 9.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1 / +3
Query: 106 LDLTNELQYGAHLQPWC 56
LD+ N L Y AH+ W
Sbjct: 1587 LDVANRLVYSAHVYSWS 1637
>NCR_G_C2.508 Ncr_G_C2.508
Length = 105197
Score = 27.2 bits (53), Expect = 9.6
Identities = 13/41 (31%), Positives = 19/41 (45%)
Frame = +2 / -1
Query: 119 HQSSHCKHFAEVDCLGLLSDEICCLAQVEPVNMVEEDSKVS 241
H + HC + E + DE+ C A + V EDS V+
Sbjct: 84602 HLAGHCCEYHEQRGIAAGDDEVQCRAIQAATSAVGEDSAVA 84480
>NCR_G_C2.085 Ncr_G_C2.085
Length = 47946
Score = 27.2 bits (53), Expect = 9.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2 / -3
Query: 60 GAAWPRESPRLR 25
G AWPR S R R
Sbjct: 19783 GCAWPRRSRRAR 19748
Score = 27.2 bits (53), Expect = 9.6
Identities = 13/45 (28%), Positives = 21/45 (45%)
Frame = +3 / +1
Query: 255 SLRAEYATPITVRPCCHSRNFFLRPLRDIACVSPKMKLSVWGTSV 389
+LR + P VR CC + +R R S +S WG+++
Sbjct: 4306 TLRLQTPYPCAVRVCCTPKRS*IRTSRLPGSSSMPSPVSTWGSTL 4440
>NCR_G_C2.896 Ncr_G_C2.896
Length = 25814
Score = 27.2 bits (53), Expect = 9.6
Identities = 8/28 (28%), Positives = 16/28 (56%)
Frame = +2 / +3
Query: 347 CLSEDEIVCLGNFGLNRELICLDEIRRV 430
C D +CLG G++ ++C ++R +
Sbjct: 6264 CAGVDHGICLGVLGISIYMLCFGKLRSI 6347
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 45095552
Number of Sequences: 995
Number of extensions: 702199
Number of successful extensions: 38600
Number of sequences better than 10.0: 54
length of query: 152
length of database: 12,656,439
effective HSP length: 47
effective length of query: 104
effective length of database: 12,609,674
effective search space: 1311406096
effective search space used: 1311406096
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)