TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1607_A11_B2
1ZS5.seq
(296 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.007 Ncr_G_C2.007 38 0.002
NCR_G_C2.341 Ncr_G_C2.341 33 0.11
NCR_G_C2.194 Ncr_G_C2.194 32 0.21
NCR_G_C2.681 Ncr_G_C2.681 31 0.39
NCR_G_C2.380 Ncr_G_C2.380 30 0.74
NCR_G_C2.700 Ncr_G_C2.700 30 0.74
NCR_G_C2.445 Ncr_G_C2.445 30 0.74
NCR_G_C2.258 Ncr_G_C2.258 29 1.0
NCR_G_C2.344 Ncr_G_C2.344 29 1.0
NCR_G_C2.364 Ncr_G_C2.364 29 1.4
NCR_G_C2.023 Ncr_G_C2.023 29 1.4
NCR_G_C2.588 Ncr_G_C2.588 29 1.4
NCR_G_C2.619 Ncr_G_C2.619 29 1.4
NCR_G_C2.032 Ncr_G_C2.032 29 1.9
NCR_G_C2.658 Ncr_G_C2.658 29 1.9
NCR_G_C2.295 Ncr_G_C2.295 29 1.9
NCR_G_C2.089 Ncr_G_C2.089 29 1.9
NCR_G_C2.189 Ncr_G_C2.189 29 1.9
NCR_G_C2.259 Ncr_G_C2.259 29 1.9
NCR_G_C2.236 Ncr_G_C2.236 26 2.6
NCR_G_C2.358 Ncr_G_C2.358 28 2.6
NCR_G_C2.769 Ncr_G_C2.769 28 2.6
NCR_G_C2.423 Ncr_G_C2.423 28 2.6
NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G... 28 2.6
NCR_G_C2.027 Ncr_G_C2.027 28 2.6
NCR_G_C2.156 Ncr_G_C2.156 28 2.6
NCR_G_C2.149 Ncr_G_C2.149 28 2.6
NCR_G_C2.125 Ncr_G_C2.125 28 3.6
NCR_G_C2.111 Ncr_G_C2.111 28 3.6
NCR_G_C2.356 Ncr_G_C2.356 28 3.6
NCR_G_C2.020 Ncr_G_C2.020 28 3.6
NCR_G_C2.205 Ncr_G_C2.205 27 5.0
NCR_G_C2.557 Ncr_G_C2.557 27 5.0
NCR_G_C2.677 Ncr_G_C2.677 27 5.0
NCR_G_C2.187 Ncr_G_C2.187 27 5.0
NCR_G_C2.162 Ncr_G_C2.162 27 5.0
NCR_G_C2.057 Ncr_G_C2.057 27 5.0
NCR_G_C2.446 Ncr_G_C2.446 27 5.0
NCR_G_C2.185 Ncr_G_C2.185 27 5.0
NCR_G_C2.240 Ncr_G_C2.240 27 6.8
NCR_G_C2.075 Ncr_G_C2.075 27 6.8
NCR_G_C2.851 Ncr_G_C2.851 27 6.8
NCR_G_C2.666 Ncr_G_C2.666 27 6.8
NCR_G_C2.709 Ncr_G_C2.709 27 6.8
NCR_G_C2.508 Ncr_G_C2.508 27 6.8
NCR_G_C2.260 Ncr_G_C2.260 27 6.8
NCR_G_C2.250 Ncr_G_C2.250 27 6.8
NCR_G_C2.115 Ncr_G_C2.115 27 6.8
NCR_G_C2.759 Ncr_G_C2.759 27 6.8
NCR_G_C2.617 Ncr_G_C2.617 27 6.8
NCR_G_C2.134 Ncr_G_C2.134 24 7.8
NCR_G_C2.132 Ncr_G_C2.132 23 7.9
NCR_G_C2.083 Ncr_G_C2.083 26 9.4
NCR_G_C2.585 Ncr_G_C2.585 26 9.4
NCR_G_C2.296 Ncr_G_C2.296 26 9.4
NCR_G_C2.322 Ncr_G_C2.322 26 9.4
NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of Ncr_G... 26 9.4
NCR_G_C2.642 Ncr_G_C2.642 26 9.4
NCR_G_C2.489 Ncr_G_C2.489 26 9.4
NCR_G_C2.232 Ncr_G_C2.232 26 9.4
NCR_G_C2.504 Ncr_G_C2.504 26 9.4
NCR_G_C2.493 Ncr_G_C2.493 26 9.4
NCR_G_C2.219 Ncr_G_C2.219 26 9.4
NCR_G_C2.338 Ncr_G_C2.338 26 9.4
NCR_G_C2.301 Ncr_G_C2.301 26 9.4
NCR_G_C2.532 Ncr_G_C2.532 26 9.4
NCR_G_C2.507 Ncr_G_C2.507 26 9.4
>NCR_G_C2.007 Ncr_G_C2.007
Length = 114811
Score = 38.2 bits (77), Expect = 0.002
Identities = 14/39 (35%), Positives = 20/39 (50%)
Frame = +2 / +3
Query: 161 IVEAWVDAFPPSLSVHNPXRSLDASCPWIVLHRHMIRTV 277
IV+ W+D P + ++ NP DA WIV R + V
Sbjct: 103047 IVQKWMDELPAAYALQNPDTQWDAENDWIVFQRRYLHLV 103163
>NCR_G_C2.341 Ncr_G_C2.341
Length = 89049
Score = 32.7 bits (65), Expect = 0.11
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1 / +2
Query: 106 IWTYQEHHGPCRCSGIPKNC 165
+W + HH C CSG NC
Sbjct: 34439 VWDFVHHHRSCNCSGRSTNC 34498
>NCR_G_C2.194 Ncr_G_C2.194
Length = 74501
Score = 31.8 bits (63), Expect = 0.21
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 212 GYEHSEREGRHPPKLQQFFGIPE 144
GY SE+ HPPK F+ +P
Sbjct: 21630 GYYISEQTSHHPPKSSYFYMVPG 21562
>NCR_G_C2.681 Ncr_G_C2.681
Length = 124507
Score = 30.8 bits (61), Expect = 0.39
Identities = 15/38 (39%), Positives = 18/38 (46%)
Frame = -1 / +2
Query: 194 REGRHPPKLQQFFGIPEHLHGP*CSWYVQIFQISAELS 81
R+GR P L +P HL G SW+ Q S LS
Sbjct: 94241 RKGRLPSALTPALSLPPHLSGDQGSWFRQ*TSFSQRLS 94354
>NCR_G_C2.380 Ncr_G_C2.380
Length = 179343
Score = 29.9 bits (59), Expect = 0.74
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 292 KHCECDSTDHMPVQNDPW 239
+ C CD +D +PV +D W
Sbjct: 125719 RRCSCDRSDCLPVMSDSW 125772
>NCR_G_C2.700 Ncr_G_C2.700
Length = 30638
Score = 29.9 bits (59), Expect = 0.74
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 214 WVMNTQRGREGIHPSFNNSLVFLNICMGRDVLG 116
W +T R REG S ++S +++ +C+ RD G
Sbjct: 12669 WHQSTSRKREGRLRSSDDSGIWILVCVPRDTTG 12767
>NCR_G_C2.445 Ncr_G_C2.445
Length = 167464
Score = 29.9 bits (59), Expect = 0.74
Identities = 13/35 (37%), Positives = 14/35 (39%)
Frame = +1 / -2
Query: 94 DIWKIWTYQEHHGPCRCSGIPKNC*SLGGCLPSLS 198
D W WT G C CS S GC P+ S
Sbjct: 120774 DSWPSWTTTGCSGSCSCSDSGSGWGSGAGCCPACS 120670
Score = 27.6 bits (54), Expect = 3.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3 / -1
Query: 102 PDICRIKLDCNFIWVKGEY 46
P IC + C F+W G Y
Sbjct: 8470 PSICSQSVSCRFLWFLGTY 8414
>NCR_G_C2.258 Ncr_G_C2.258
Length = 28087
Score = 29.5 bits (58), Expect = 1.0
Identities = 12/39 (30%), Positives = 19/39 (47%)
Frame = +1 / +2
Query: 61 PYEVAVQLNSADIWKIWTYQEHHGPCRCSGIPKNC*SLG 177
P ++ +++ + W I + H GP RC G N LG
Sbjct: 9533 PKKLGIEMACSTDWTIVVFF*HSGPRRCDGADINTNELG 9649
>NCR_G_C2.344 Ncr_G_C2.344
Length = 99019
Score = 29.5 bits (58), Expect = 1.0
Identities = 14/46 (30%), Positives = 23/46 (49%)
Frame = -3 / -2
Query: 288 IVNVTVRIICLCRTIHGHDASNDLXGL*TLREGGKASTQASTILWY 151
+V+ TV CLC + HD ND G + +GG + + L++
Sbjct: 44829 VVSNTVLCGCLCSCMIIHDMMNDWKGKGDVHDGGGE*MKCTVFLFW 44692
>NCR_G_C2.364 Ncr_G_C2.364
Length = 87437
Score = 29.0 bits (57), Expect = 1.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1 / +3
Query: 64 YEVAVQLNSADIWKIWTYQEHHGPC 138
Y+V L S D W++W + + G C
Sbjct: 37161 YDVLSLLASVDFWELWVWPLNKGTC 37235
>NCR_G_C2.023 Ncr_G_C2.023
Length = 117328
Score = 29.0 bits (57), Expect = 1.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / -1
Query: 151 IPKNC*SLGGCLPSLSEC 204
+P+NC +G CLP S C
Sbjct: 13243 VPRNCPGIGPCLPESSWC 13190
>NCR_G_C2.588 Ncr_G_C2.588
Length = 154785
Score = 29.0 bits (57), Expect = 1.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1 / -1
Query: 266 SYACAERSMGTMRLTIYXGYEHSEREGRHPPKL 168
SY C++ S+ T R + E S+++GR P L
Sbjct: 93549 SYRCSDASVCTYRSPMTSQTERSQKDGRSPGAL 93451
>NCR_G_C2.619 Ncr_G_C2.619
Length = 9007
Score = 29.0 bits (57), Expect = 1.4
Identities = 9/22 (40%), Positives = 11/22 (49%)
Frame = +2 / -1
Query: 179 DAFPPSLSVHNPXRSLDASCPW 244
D PP +S H R + CPW
Sbjct: 379 DPHPPRISAHKYPRQTNRGCPW 314
>NCR_G_C2.032 Ncr_G_C2.032
Length = 80998
Score = 28.6 bits (56), Expect = 1.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -1 / -3
Query: 233 MRLTIYXGYEHSEREGRHPPKLQQFFGIPEHLHGP*CSWYVQIFQISA 90
+R + G+ HS++ P+ ++ HL GP C F++ A
Sbjct: 53018 VRFRVCNGWVHSQQPPSRHPQCPFYYTNCPHLRGPLCGRLPMTFRVRA 52875
>NCR_G_C2.658 Ncr_G_C2.658
Length = 36557
Score = 28.6 bits (56), Expect = 1.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1 / +3
Query: 134 GP*CSWYVQIFQISAELSWTATSYGSRVN 48
G *CS+Y+ IFQ+S + YG + N
Sbjct: 14988 GK*CSYYLFIFQLSVWAGASGNRYGVKGN 15074
>NCR_G_C2.295 Ncr_G_C2.295
Length = 73468
Score = 28.6 bits (56), Expect = 1.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 38 GYQYSPLTHMKLQSSLIRQI 97
GY+Y L H++ QS LIR I
Sbjct: 405 GYRYKLLLHLQQQSDLIRSI 464
>NCR_G_C2.089 Ncr_G_C2.089
Length = 57515
Score = 28.6 bits (56), Expect = 1.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3 / +3
Query: 78 PA*FGRYLEDLDIPRTSRPMQMFRNTKELLKLGWMPSLPL 197
PA GR DLD R S+P+ L + WMP L L
Sbjct: 20178 PAGNGRQRPDLDGTRRSKPIPTMPRPIRLNSVLWMPLLLL 20297
>NCR_G_C2.189 Ncr_G_C2.189
Length = 127770
Score = 28.6 bits (56), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1 / +3
Query: 116 YVQIFQISAELSWTATSYGSRVNIDSPPSRVVGGLRR 6
+++ Q ELSWT +Y ++ +S +R V LRR
Sbjct: 83670 WLEFLQSYVELSWTRNNYLENIHRNSDCTRRVLKLRR 83780
>NCR_G_C2.259 Ncr_G_C2.259
Length = 185660
Score = 28.6 bits (56), Expect = 1.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 118 QEHHGPCRCSGIPKNC*SLGG 180
++H GPCRC +P + GG
Sbjct: 79831 RDHRGPCRCIDMPSGRGTKGG 79893
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 26.3 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 16/28 (56%)
Frame = +2 / -1
Query: 53 PLTHMKLQSSLIRQISGRFGHTKNITAH 136
PL + ++ I+ S F HTKNIT +
Sbjct: 71010 PLEQISFITACIQSYSFDFPHTKNITTY 70927
Score = 25.8 bits (50), Expect(2) = 2.6
Identities = 9/26 (34%), Positives = 16/26 (60%)
Frame = +1 / +1
Query: 136 CRCSGIPKNC*SLGGCLPSLSECS*P 213
C+C+G+ ++C + G L + CS P
Sbjct: 50845 CQCTGLARDCRTAGL*LDRRARCSQP 50922
Score = 19.8 bits (37), Expect(2) = 2.6
Identities = 4/14 (28%), Positives = 8/14 (56%)
Frame = +1 / +2
Query: 70 VAVQLNSADIWKIW 111
V + + D+W +W
Sbjct: 50777 VTIGGKAVDMWDLW 50818
>NCR_G_C2.358 Ncr_G_C2.358
Length = 98362
Score = 28.1 bits (55), Expect = 2.6
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2 / -2
Query: 161 IVEAWVDAFPPSLSVHNPXRSLDASCPWIVLHRHMIRTVTF 283
+ E +D P ++ H S S PW+V H TF
Sbjct: 48480 MTECTLDGRPSRIAGHRSSPSPPLSRPWLVPHNFACSRWTF 48358
>NCR_G_C2.769 Ncr_G_C2.769
Length = 41985
Score = 28.1 bits (55), Expect = 2.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / -2
Query: 147 RNTKELLKLGWMPSLP 194
R T LL LGW PSLP
Sbjct: 39224 RATLALLSLGWKPSLP 39177
>NCR_G_C2.423 Ncr_G_C2.423
Length = 97362
Score = 28.1 bits (55), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3 / +2
Query: 129 VMFLVCPNLPDICRIKLDCNFIWVKGE 49
++ L CP P +C K C +W+ +
Sbjct: 41912 ILHLSCPLPPPVCPAK*RCTLLWLSSQ 41992
>NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G_C2.022
from base 400001
Length = 110000
Score = 28.1 bits (55), Expect = 2.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / -2
Query: 80 WTATSYGSRVNIDSPPSRVVG 18
WTA + G R+ + +P SR VG
Sbjct: 33745 WTARAVGYRLIVLAPESREVG 33683
>NCR_G_C2.027 Ncr_G_C2.027
Length = 84885
Score = 28.1 bits (55), Expect = 2.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1 / +3
Query: 209 YEHSEREGRHPPKLQQFFGIPEHLH 135
+ + E RHPP+ Q IP H+H
Sbjct: 71553 WSNREANQRHPPQSQDPSTIPPHIH 71627
>NCR_G_C2.156 Ncr_G_C2.156
Length = 67929
Score = 28.1 bits (55), Expect = 2.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3 / +3
Query: 162 ILWYS*TSAWAVMFLVCPNLPDICRIKLDCN 70
I W S S ++ +CP +C +L+C+
Sbjct: 13035 IAWVSRVSGTQILVGICPQYKSLCSDRLNCS 13127
>NCR_G_C2.149 Ncr_G_C2.149
Length = 60481
Score = 28.1 bits (55), Expect = 2.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 282 NVTVRIICLCRTIHGHDAS 226
N++VR ICLCR++ H +S
Sbjct: 1485 NLSVRTICLCRSLATH*SS 1541
>NCR_G_C2.125 Ncr_G_C2.125
Length = 138790
Score = 27.6 bits (54), Expect = 3.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2 / -2
Query: 197 LSVHNPXRSLDASCPWIVLHRHMIRTVTFTM 289
+ +HNP A PWI L + T++ T+
Sbjct: 31569 IHIHNPAAHTTAHHPWIPLLATTVATISSTL 31477
>NCR_G_C2.111 Ncr_G_C2.111
Length = 322912
Score = 27.6 bits (54), Expect = 3.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2 / +2
Query: 280 CDSTDHMPVQNDPWARCV 227
CDSTDH P + W V
Sbjct: 154379 CDSTDHCPWDEEKWKLAV 154432
Score = 26.3 bits (51), Expect = 9.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 211 VMNTQRGREGIHPSFNNSLVFLNICMG 131
V + R +G++P+F L+F+NI G
Sbjct: 205258 VASIHRTPKGVNPTFFQDLIFVNIKPG 205178
>NCR_G_C2.356 Ncr_G_C2.356
Length = 40340
Score = 27.6 bits (54), Expect = 3.6
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = -1 / +3
Query: 185 RHPPKLQQFFGIPEHLH 135
RHP LQ FG P+H H
Sbjct: 14988 RHPGTLQCHFGSPQHHH 15038
Score = 26.7 bits (52), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2 / +1
Query: 179 DAFPPSLSVHNPXRSLDASCP 241
DA P S S NP R SCP
Sbjct: 8761 DALPWSSSSRNPARGTRTSCP 8823
>NCR_G_C2.020 Ncr_G_C2.020
Length = 66556
Score = 27.6 bits (54), Expect = 3.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / -2
Query: 105 LPDICRIKLDCNFIW 61
LPD CR+ DC +W
Sbjct: 25551 LPDRCRLSADCGGLW 25507
Score = 26.3 bits (51), Expect = 9.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1 / -3
Query: 142 CSGIPKNC*SLGGCLPSLSEC 204
C+ +P +C CLPS C
Sbjct: 27140 CAPLPGHCRGECSCLPSFRRC 27078
>NCR_G_C2.205 Ncr_G_C2.205
Length = 197179
Score = 27.2 bits (53), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1 / +2
Query: 269 GSYACAERSMGTMRLTIYXGYEHSEREGR 183
G + + MGTM G+ HSER GR
Sbjct: 8933 GWWVVMDGCMGTMGYRWMDGWRHSERGGR 9019
Score = 27.2 bits (53), Expect = 5.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2 / -3
Query: 182 AFPPSLSVHNPXRSLDASCP 241
A PP S+H P L SCP
Sbjct: 42959 AAPPPFSLHQPSPRLRRSCP 42900
>NCR_G_C2.557 Ncr_G_C2.557
Length = 84113
Score = 27.2 bits (53), Expect = 5.0
Identities = 10/24 (41%), Positives = 15/24 (61%)
Frame = +2 / +3
Query: 188 PPSLSVHNPXRSLDASCPWIVLHR 259
PPSLS + +S+D+ W+ L R
Sbjct: 40353 PPSLSPASLSKSMDSRLDWVALAR 40424
>NCR_G_C2.677 Ncr_G_C2.677
Length = 79423
Score = 27.2 bits (53), Expect = 5.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 47 YSPLTHMKLQSSLIRQISGR 106
Y P+T+ KL+ +LI + GR
Sbjct: 77191 YPPITYPKLKINLIYKFKGR 77250
>NCR_G_C2.187 Ncr_G_C2.187
Length = 100470
Score = 27.2 bits (53), Expect = 5.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3 / +1
Query: 267 IICLCRTIHGHDASND 220
++C CR++H H ND
Sbjct: 65455 VLCGCRSLHSHSGLND 65502
>NCR_G_C2.162 Ncr_G_C2.162
Length = 33378
Score = 27.2 bits (53), Expect = 5.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3 / -1
Query: 198 REGGKASTQASTILWYS*TSAWAVMFLVCPNLP 100
+E G S +AS++L +AW + L+C ++P
Sbjct: 30759 KEPGTLSLRASSVLRDELDNAWRYV*LICTHVP 30661
Score = 26.3 bits (51), Expect = 9.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2 / +3
Query: 128 TAHADVQEYQRIVEAWVDAFPPSLSVH 208
T+H + R E+W+D F ++ VH
Sbjct: 2520 TSHKGINPLIRYHESWIDCFAFTIIVH 2600
>NCR_G_C2.057 Ncr_G_C2.057
Length = 66877
Score = 27.2 bits (53), Expect = 5.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1 / +3
Query: 94 DIWKIWTYQEHHGPCRCSG 150
++W HH PCRC G
Sbjct: 34614 NLWSFDYLTTHHRPCRCLG 34670
>NCR_G_C2.446 Ncr_G_C2.446
Length = 145200
Score = 27.2 bits (53), Expect = 5.0
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -2 / +3
Query: 292 KHCECDSTDHMPVQNDPWARCV*RSXWVMNTQRGREGIHPSFNNS 158
+HC C S P+ + R V + +V++T + + NS
Sbjct: 128211 QHCRCSSWTTTPINAGSFGRAVGQQRYVLDTGVEDDSDETDYENS 128345
Score = 26.7 bits (52), Expect = 6.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 15 APHDSAWRAINIHP 56
APH SAW A+N P
Sbjct: 20292 APHRSAWTAVNHQP 20333
Score = 26.3 bits (51), Expect = 9.4
Identities = 11/23 (47%), Positives = 12/23 (51%)
Frame = +2 / +2
Query: 155 QRIVEAWVDAFPPSLSVHNPXRS 223
QR + V FPP L H P RS
Sbjct: 105632 QRTWQCQVGVFPPVLRAHPPRRS 105700
>NCR_G_C2.185 Ncr_G_C2.185
Length = 128626
Score = 27.2 bits (53), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2 / -3
Query: 289 HCECDSTDHMPVQNDPWARC 230
HC C T+H + +D RC
Sbjct: 104810 HCNCPGTNH*DISSDQKIRC 104751
>NCR_G_C2.240 Ncr_G_C2.240
Length = 40011
Score = 26.7 bits (52), Expect = 6.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1 / +3
Query: 254 AERSMGTMRLTIYXGYEHSEREGRHPP 174
AER GT + +Y G ER R+PP
Sbjct: 31002 AERYAGTGLMCVY*GSTKKERIKRYPP 31082
>NCR_G_C2.075 Ncr_G_C2.075
Length = 33884
Score = 26.7 bits (52), Expect = 6.8
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1 / +1
Query: 100 WKIWTYQEHHGPCRCSGIPK 159
W+++ H GP RC P+
Sbjct: 11647 WRVYPRGHHRGPGRCRSCPR 11706
>NCR_G_C2.851 Ncr_G_C2.851
Length = 16919
Score = 26.7 bits (52), Expect = 6.8
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -1 / +1
Query: 257 CAERSMGTMRLTIYXGYEHSEREGRHP 177
C + S G IY Y +GRHP
Sbjct: 6604 CRDGSSGVWEFGIYSKYPELGADGRHP 6684
>NCR_G_C2.666 Ncr_G_C2.666
Length = 46519
Score = 26.7 bits (52), Expect = 6.8
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = -3 / +1
Query: 264 ICLCRTIHG 238
ICLCRT+HG
Sbjct: 1135 ICLCRTLHG 1161
>NCR_G_C2.709 Ncr_G_C2.709
Length = 16696
Score = 26.7 bits (52), Expect = 6.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1 / -3
Query: 107 IFQISAELSWTATSYGSRVNIDSPPSRVVG 18
IFQ+S +W G R+ SPP VG
Sbjct: 13595 IFQMSTVPTWPGFGAGLRMVSPSPPPTAVG 13506
>NCR_G_C2.508 Ncr_G_C2.508
Length = 105197
Score = 26.7 bits (52), Expect = 6.8
Identities = 11/24 (45%), Positives = 16/24 (65%)
Frame = -1 / -1
Query: 98 ISAELSWTATSYGSRVNIDSPPSR 27
+S E TATS S++ + +PPSR
Sbjct: 65765 LSIEAPGTATSAPSQLRLQAPPSR 65694
>NCR_G_C2.260 Ncr_G_C2.260
Length = 61881
Score = 26.7 bits (52), Expect = 6.8
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -1 / -2
Query: 269 GSYACAERSMGTMRLTIYXGYEHSEREGRHPPKLQ 165
G C S + L+++ H+E GR+P L+
Sbjct: 36629 GPGVCRSSSRSALHLSLFLRLTHTEAFGRNPADLE 36525
Score = 26.7 bits (52), Expect = 6.8
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +1 / +2
Query: 82 LNSADIWKIWTYQEHHGPCRCS 147
L+S W W +HHG C
Sbjct: 29129 LDSKSTWSYWKGAKHHGLWWCC 29194
>NCR_G_C2.250 Ncr_G_C2.250
Length = 11858
Score = 26.7 bits (52), Expect = 6.8
Identities = 7/15 (46%), Positives = 9/15 (59%)
Frame = +1 / -2
Query: 100 WKIWTYQEHHGPCRC 144
W+ W +H G CRC
Sbjct: 79 WRFWWEGKHTGRCRC 35
>NCR_G_C2.115 Ncr_G_C2.115
Length = 55252
Score = 26.7 bits (52), Expect = 6.8
Identities = 11/34 (32%), Positives = 16/34 (46%)
Frame = -1 / +1
Query: 239 GTMRLTIYXGYEHSEREGRHPPKLQQFFGIPEHL 138
G R + H R P +L++FFG+P L
Sbjct: 32740 GGNREVFFTDVRHLSRLCLFPSRLREFFGLPRSL 32841
>NCR_G_C2.759 Ncr_G_C2.759
Length = 32694
Score = 26.7 bits (52), Expect = 6.8
Identities = 7/19 (36%), Positives = 10/19 (51%)
Frame = -2 / +3
Query: 286 CECDSTDHMPVQNDPWARC 230
CE +P++ PW RC
Sbjct: 26640 CEASDAQRVPMRELPWVRC 26696
>NCR_G_C2.617 Ncr_G_C2.617
Length = 51456
Score = 26.7 bits (52), Expect = 6.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3 / +2
Query: 177 TQASTILWYS*TSAWAVMFLVCPNLPDICRIKLD 76
T+ +LW T A +F+ CP+L D+ +++D
Sbjct: 17444 TRLGFVLWKDWT*WVASVFVSCPSLVDLSVLRVD 17545
>NCR_G_C2.134 Ncr_G_C2.134
Length = 36749
Score = 23.5 bits (45), Expect(2) = 7.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 221 SLDASCPWIVLHRHMIRT 274
SLD CP + R++IRT
Sbjct: 16822 SLDRDCPDVRPRRYLIRT 16875
Score = 20.8 bits (39), Expect(2) = 7.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +1 / +1
Query: 100 WKIWTYQEHHGPCRCSGIP 156
W T Q HH P IP
Sbjct: 16705 WPY*TVQSHHSPFAKMTIP 16761
>NCR_G_C2.132 Ncr_G_C2.132
Length = 33196
Score = 23.1 bits (44), Expect(2) = 7.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1 / -1
Query: 64 YEVAVQLNSADIWKIWTYQEHHG 132
+ +AV ++S D W+ T EH G
Sbjct: 32734 FYLAVCVSSYDRWRTETSHEHDG 32666
Score = 21.2 bits (40), Expect(2) = 7.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 11 VGPPRLGLEGYQ 46
+G PRLGLE ++
Sbjct: 32861 LGSPRLGLEAWR 32826
>NCR_G_C2.083 Ncr_G_C2.083
Length = 123429
Score = 26.3 bits (51), Expect = 9.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3 / -3
Query: 285 VNVTVRIICLCRTIHGHDASNDLXG 211
VN+ +IC CR GH ++ G
Sbjct: 65260 VNLNGHLICGCRATRGHKQGSEALG 65186
Score = 26.3 bits (51), Expect = 9.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2 / -3
Query: 212 PXRSLDASCPWIVLHRHMI 268
P R A CPW +L R ++
Sbjct: 4822 PHRLCQAQCPWAMLPRQLL 4766
>NCR_G_C2.585 Ncr_G_C2.585
Length = 245975
Score = 26.3 bits (51), Expect = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +1
Query: 118 QEHHGPCRC 144
Q HHGPC C
Sbjct: 197545 QHHHGPCSC 197571
>NCR_G_C2.296 Ncr_G_C2.296
Length = 137551
Score = 26.3 bits (51), Expect = 9.4
Identities = 13/32 (40%), Positives = 20/32 (61%)
Frame = -2 / +3
Query: 151 FLNICMGRDVLGMSKSSRYLPN*AGLQLHMGQ 56
FL IC G +L +SKS++ +P+ A L + Q
Sbjct: 134439 FLTICSGVVLLQLSKSAKDVPDAAVLSGDLDQ 134534
>NCR_G_C2.322 Ncr_G_C2.322
Length = 116391
Score = 26.3 bits (51), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = +1 / -2
Query: 139 RCSGIPKNC*SLGGCLP 189
RC+G + LGGCLP
Sbjct: 94976 RCNGPSRRASDLGGCLP 94926
>NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of Ncr_G_C2.022
from base 300001
Length = 110000
Score = 26.3 bits (51), Expect = 9.4
Identities = 11/24 (45%), Positives = 13/24 (53%)
Frame = -1 / +1
Query: 86 LSWTATSYGSRVNIDSPPSRVVGG 15
LSW+ G R PP+RV GG
Sbjct: 89959 LSWSLQDVGWRRRWREPPNRVPGG 90030
>NCR_G_C2.642 Ncr_G_C2.642
Length = 116778
Score = 26.3 bits (51), Expect = 9.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2 / +2
Query: 244 PWARCV*RSXWVMNTQRGREGIHPSFNNS 158
PW RCV* + T++ + +PS S
Sbjct: 6485 PWCRCV*EQENLSKTKKTNQNPNPSMKAS 6571
>NCR_G_C2.489 Ncr_G_C2.489
Length = 72191
Score = 26.3 bits (51), Expect = 9.4
Identities = 13/31 (41%), Positives = 16/31 (50%)
Frame = +2 / -1
Query: 149 EYQRIVEAWVDAFPPSLSVHNPXRSLDASCP 241
E+ R + V AFP S H P +S AS P
Sbjct: 71777 EFSRWLSYSVAAFPGLES*HRPAKSTTASSP 71685
>NCR_G_C2.232 Ncr_G_C2.232
Length = 60784
Score = 26.3 bits (51), Expect = 9.4
Identities = 12/32 (37%), Positives = 16/32 (49%)
Frame = +1 / +1
Query: 175 GGCLPSLSECS*PX*IVRRIVPMDRSAQAYDP 270
G C P E S P +V+R+ DR + DP
Sbjct: 34087 GDCWP*HKEDSLPEALVQRLTRRDRGSTRQDP 34182
>NCR_G_C2.504 Ncr_G_C2.504
Length = 7984
Score = 26.3 bits (51), Expect = 9.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1 / -3
Query: 100 WKIWTYQEHHGPCRCSGIPKN 162
W W Y EHH P G N
Sbjct: 4292 WVAWGYSEHHEPTYRGGSAVN 4230
>NCR_G_C2.493 Ncr_G_C2.493
Length = 19706
Score = 26.3 bits (51), Expect = 9.4
Identities = 11/39 (28%), Positives = 16/39 (40%)
Frame = -1 / +3
Query: 248 RSMGTMRLTIYXGYEHSEREGRHPPKLQQFFGIPEHLHG 132
+S GT R+ Y + + PPK + P LH
Sbjct: 5724 KSNGTCRMHACHAYPSTTPSLKVPPKCINSYSTPSKLHK 5840
>NCR_G_C2.219 Ncr_G_C2.219
Length = 282514
Score = 26.3 bits (51), Expect = 9.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 191 PSLSVHNPXRSLDASC 238
P++S H+P LD+ C
Sbjct: 165542 PTISSHHPSPPLDSPC 165589
>NCR_G_C2.338 Ncr_G_C2.338
Length = 35685
Score = 26.3 bits (51), Expect = 9.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2 / +1
Query: 38 GYQYSPLTHMKLQSSLIRQISGRFGHTKNITAHADVQEYQ 157
G+ SPL + L S+ + + S R G + A Q++Q
Sbjct: 16864 GHVGSPLRNSSLASAFVSEDSNRQGSLTGESLSALTQQFQ 16983
>NCR_G_C2.301 Ncr_G_C2.301
Length = 71471
Score = 26.3 bits (51), Expect = 9.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1 / -3
Query: 131 P*CSWYVQIFQISAELSWTATSYGSRVNI 45
P W+ +Q +A+ + TSY S++N+
Sbjct: 50598 PPVRWW*YAYQRAAQFLYDRTSYQSQLNM 50512
>NCR_G_C2.532 Ncr_G_C2.532
Length = 14158
Score = 26.3 bits (51), Expect = 9.4
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1 / -1
Query: 272 YGSYACAERSMGTMRLTIYXGYEHSEREGRHPPKLQ 165
Y + + ++ +M ++ Y H + GRHPP +Q
Sbjct: 7036 YSIFLPSSGTVLSMDRAVF*HYLHLQGAGRHPPNVQ 6929
>NCR_G_C2.507 Ncr_G_C2.507
Length = 196904
Score = 26.3 bits (51), Expect = 9.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / -3
Query: 206 HNPXRSLDASCPWIV 250
H+P SL SC WIV
Sbjct: 59679 HHPMSSLSRSCVWIV 59635
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 34608528
Number of Sequences: 995
Number of extensions: 543503
Number of successful extensions: 29302
Number of sequences better than 10.0: 67
length of query: 98
length of database: 12,656,439
effective HSP length: 44
effective length of query: 54
effective length of database: 12,612,659
effective search space: 681083586
effective search space used: 681083586
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 51 (26.3 bits)