TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1607_D08_H1
5ZS5.seq
(246 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.083 Ncr_G_C2.083 38 0.002
NCR_G_C2.764 Ncr_G_C2.764 31 0.20
NCR_G_C2.694 Ncr_G_C2.694 31 0.20
NCR_G_C2.148 Ncr_G_C2.148 31 0.27
NCR_G_C2.519 Ncr_G_C2.519 31 0.27
NCR_G_C2.944 Ncr_G_C2.944 30 0.37
NCR_G_C2.745 Ncr_G_C2.745 30 0.51
NCR_G_C2.329 Ncr_G_C2.329 30 0.51
NCR_G_C2.042_5 Ncr_G_C2.042_5.seq Continuation (5 of 6) of Ncr_G... 29 0.70
NCR_G_C2.497 Ncr_G_C2.497 24 0.85
NCR_G_C2.541 Ncr_G_C2.541 29 0.96
NCR_G_C2.364 Ncr_G_C2.364 29 1.3
NCR_G_C2.630 Ncr_G_C2.630 29 1.3
NCR_G_C2.063 Ncr_G_C2.063 29 1.3
NCR_G_C2.102 Ncr_G_C2.102 29 1.3
NCR_G_C2.531 Ncr_G_C2.531 29 1.3
NCR_G_C2.529 Ncr_G_C2.529 29 1.3
NCR_G_C2.204 Ncr_G_C2.204 29 1.3
NCR_G_C2.256 Ncr_G_C2.256 29 1.3
NCR_G_C2.376 Ncr_G_C2.376 28 1.8
NCR_G_C2.646 Ncr_G_C2.646 28 1.8
NCR_G_C2.248 Ncr_G_C2.248 28 2.3
NCR_G_C2.130 Ncr_G_C2.130 28 2.5
NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G... 28 2.5
NCR_G_C2.559 Ncr_G_C2.559 28 2.5
NCR_G_C2.426 Ncr_G_C2.426 28 2.5
NCR_G_C2.151 Ncr_G_C2.151 27 2.7
NCR_G_C2.753 Ncr_G_C2.753 27 3.4
NCR_G_C2.107 Ncr_G_C2.107 27 3.4
NCR_G_C2.388 Ncr_G_C2.388 27 3.4
NCR_G_C2.592 Ncr_G_C2.592 27 3.4
NCR_G_C2.233 Ncr_G_C2.233 27 3.4
NCR_G_C2.655 Ncr_G_C2.655 27 3.4
NCR_G_C2.448 Ncr_G_C2.448 27 3.4
NCR_G_C2.099 Ncr_G_C2.099 27 3.8
NCR_G_C2.216 Ncr_G_C2.216 27 4.7
NCR_G_C2.434 Ncr_G_C2.434 27 4.7
NCR_G_C2.546 Ncr_G_C2.546 27 4.7
NCR_G_C2.236 Ncr_G_C2.236 27 4.7
NCR_G_C2.582 Ncr_G_C2.582 27 4.7
NCR_G_C2.019 Ncr_G_C2.019 27 4.7
NCR_G_C2.585 Ncr_G_C2.585 27 4.7
NCR_G_C2.441 Ncr_G_C2.441 27 4.7
NCR_G_C2.238 Ncr_G_C2.238 27 4.7
NCR_G_C2.569 Ncr_G_C2.569 27 4.7
NCR_G_C2.375 Ncr_G_C2.375 27 4.7
NCR_G_C2.564 Ncr_G_C2.564 27 4.7
NCR_G_C2.088 Ncr_G_C2.088 24 5.4
NCR_G_C2.352 Ncr_G_C2.352 26 6.4
NCR_G_C2.192 Ncr_G_C2.192 26 6.4
NCR_G_C2.654 Ncr_G_C2.654 26 6.4
NCR_G_C2.368 Ncr_G_C2.368 26 6.4
NCR_G_C2.775 Ncr_G_C2.775 26 6.4
NCR_G_C2.574 Ncr_G_C2.574 26 6.4
NCR_G_C2.205 Ncr_G_C2.205 26 6.4
NCR_G_C2.150 Ncr_G_C2.150 26 6.4
NCR_G_C2.692 Ncr_G_C2.692 26 6.4
NCR_G_C2.169 Ncr_G_C2.169 26 6.4
NCR_G_C2.514 Ncr_G_C2.514 26 6.4
NCR_G_C2.053 Ncr_G_C2.053 26 8.8
NCR_G_C2.690 Ncr_G_C2.690 26 8.8
NCR_G_C2.586 Ncr_G_C2.586 26 8.8
NCR_G_C2.439 Ncr_G_C2.439 26 8.8
NCR_G_C2.404 Ncr_G_C2.404 26 8.8
NCR_G_C2.065 Ncr_G_C2.065 26 8.8
NCR_G_C2.445 Ncr_G_C2.445 26 8.8
NCR_G_C2.430 Ncr_G_C2.430 26 8.8
NCR_G_C2.115 Ncr_G_C2.115 26 8.8
NCR_G_C2.433 Ncr_G_C2.433 26 8.8
NCR_G_C2.081 Ncr_G_C2.081 26 8.8
NCR_G_C2.116 Ncr_G_C2.116 26 8.8
NCR_G_C2.332 Ncr_G_C2.332 26 8.8
NCR_G_C2.681 Ncr_G_C2.681 26 8.8
NCR_G_C2.175 Ncr_G_C2.175 24 9.2
>NCR_G_C2.083 Ncr_G_C2.083
Length = 123429
Score = 37.7 bits (76), Expect = 0.002
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1 GMSMEELARLQEEQFAAARERHG*E 75
G+S+EEL R+Q EQFA A RH *E
Sbjct: 110308 GLSLEELERIQREQFADAAARHT*E 110234
>NCR_G_C2.764 Ncr_G_C2.764
Length = 54886
Score = 31.3 bits (62), Expect = 0.20
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2 / +1
Query: 20 SLVYKRSSSPQHESVTVESLNCLMGHVERSKRASGYFGIARR 145
+ +++ +SS HE + MGHV RS+ + FG+ RR
Sbjct: 14968 AFIFETTSSFLHERSLLLQA*VSMGHVRRSEVTAAEFGVLRR 15093
>NCR_G_C2.694 Ncr_G_C2.694
Length = 56391
Score = 31.3 bits (62), Expect = 0.20
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3 / +1
Query: 115 PFTSFNMTHETIQTLNRDALVLRRTA 38
PFTS + H T QT++ D+ L+R A
Sbjct: 7237 PFTSVSHQHSTFQTMDNDSPALQRQA 7314
>NCR_G_C2.148 Ncr_G_C2.148
Length = 98105
Score = 30.8 bits (61), Expect = 0.27
Identities = 14/42 (33%), Positives = 21/42 (49%)
Frame = -3 / +1
Query: 232 SQITRPLRHDKIPGSSKPNPVQXXXXXXXXXSNAKIP*RPFT 107
+Q RP+R K GS +P+P+Q +P RP+T
Sbjct: 49402 AQAQRPVRDHKETGSLQPHPLQGWAQCTLPPLQPPVPIRPWT 49527
Score = 25.8 bits (50), Expect = 8.8
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +3 / +1
Query: 15 RARSSTRGAVRRSTRASRLRV*IVSWVMLKEV 110
+A+ RG V R A L V* + WV++ EV
Sbjct: 26431 KAQIRKRGYVYRRPMA*ELGV*DLGWVVVVEV 26526
>NCR_G_C2.519 Ncr_G_C2.519
Length = 168333
Score = 30.8 bits (61), Expect = 0.27
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1 / -3
Query: 171 SSPASPVRQRLAMPKYPDALLLLST*PMR 85
SSP P + R A+P P ALL *P+R
Sbjct: 77578 SSPPPPAQSRSALPLSPTALLTQPP*PLR 77492
>NCR_G_C2.944 Ncr_G_C2.944
Length = 9326
Score = 30.4 bits (60), Expect = 0.37
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1 / +3
Query: 198 SQAHPSLIQSSPASPVRQRLAMPKYPDALLLL 103
S+ IQ+SPASPV L M P LLLL
Sbjct: 6378 SRVDTKKIQASPASPVLALLPMLDLPKLLLLL 6473
>NCR_G_C2.745 Ncr_G_C2.745
Length = 36727
Score = 29.9 bits (59), Expect = 0.51
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3 / -3
Query: 36 GAVRRSTRASRLRV*IVSWVMLKEVKGRQGILALLG 143
G R + A+R RV +W+ K V GRQG LG
Sbjct: 10052 GG*RHAAIATRCRVMDTAWIPPKAVLGRQGAFCGLG 9945
>NCR_G_C2.329 Ncr_G_C2.329
Length = 53959
Score = 29.9 bits (59), Expect = 0.51
Identities = 10/21 (47%), Positives = 16/21 (75%)
Frame = -3 / -2
Query: 238 VMSQITRPLRHDKIPGSSKPN 176
+M+ + RP+R K PGS++PN
Sbjct: 48339 MMTTLNRPMRSAKRPGSTRPN 48277
>NCR_G_C2.042_5 Ncr_G_C2.042_5.seq Continuation (5 of 6) of Ncr_G_C2.042
from base 400001
Length = 110000
Score = 29.5 bits (58), Expect = 0.70
Identities = 16/52 (30%), Positives = 25/52 (47%)
Frame = +3 / -2
Query: 15 RARSSTRGAVRRSTRASRLRV*IVSWVMLKEVKGRQGILALLGVDEQDWLDW 170
R+R R A R +R LRV*+++W + G+ LL ++ W W
Sbjct: 68845 RSRLGVRAAAR*FSRRFWLRV*VLAWPRRRVAL*MGGVSTLLAG*QK*WCCW 68690
>NCR_G_C2.497 Ncr_G_C2.497
Length = 192966
Score = 24.4 bits (47), Expect(2) = 0.85
Identities = 11/24 (45%), Positives = 14/24 (57%)
Frame = +3 / -3
Query: 48 RSTRASRLRV*IVSWVMLKEVKGR 119
R R SR R +SWV L +KG+
Sbjct: 48040 RIPRVSRWRAWRMSWVSLS*IKGK 47969
Score = 22.6 bits (43), Expect(2) = 0.85
Identities = 7/16 (43%), Positives = 10/16 (61%)
Frame = +1 / -1
Query: 157 TGWTGLD*AWMSLGFC 204
+GW G D A++ L F
Sbjct: 47904 SGWRGWDVAFLVLKFL 47857
>NCR_G_C2.541 Ncr_G_C2.541
Length = 108788
Score = 29.0 bits (57), Expect = 0.96
Identities = 10/24 (41%), Positives = 15/24 (61%)
Frame = +3 / -1
Query: 117 RQGILALLGVDEQDWLDWTGLGLD 188
R+G + G + + W+ W GLGLD
Sbjct: 30848 RRGTVEERGRETRSWVIWAGLGLD 30777
>NCR_G_C2.364 Ncr_G_C2.364
Length = 87437
Score = 28.6 bits (56), Expect = 1.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1 / +1
Query: 198 SQAHPSLIQSSPASPVRQRLAM 133
S++ PS QSS P QR AM
Sbjct: 78541 SRSRPSSFQSSSPRPASQRCAM 78606
>NCR_G_C2.630 Ncr_G_C2.630
Length = 57359
Score = 28.6 bits (56), Expect = 1.3
Identities = 16/46 (34%), Positives = 23/46 (49%)
Frame = -1 / -3
Query: 207 MTKSQAHPSLIQSSPASPVRQRLAMPKYPDALLLLST*PMRQFRLS 70
+ S AHP +I + ++P+R LA P + LL S P F S
Sbjct: 47547 LPSSSAHPEVISNLYSTPLR*TLAKPSR*NDLLRPSYAPRNTFAAS 47410
Score = 25.8 bits (50), Expect = 8.8
Identities = 10/36 (27%), Positives = 16/36 (43%)
Frame = +2 / +3
Query: 8 PWKSSLVYKRSSSPQHESVTVESLNCLMGHVERSKR 115
PW + KRS++P+ S+ + H R R
Sbjct: 8736 PWVALAAQKRSAAPKATSIAAVQVQVKAQHCSRPSR 8843
>NCR_G_C2.063 Ncr_G_C2.063
Length = 8266
Score = 28.6 bits (56), Expect = 1.3
Identities = 11/30 (36%), Positives = 15/30 (49%)
Frame = +2 / +2
Query: 98 VERSKRASGYFGIARR*RTGLAGLDWIRLG 187
+ + KR +G G ARR G G W+ G
Sbjct: 3830 IRKGKRFAGLGGFARRTSAGWVGAGWVGTG 3919
>NCR_G_C2.102 Ncr_G_C2.102
Length = 54650
Score = 28.6 bits (56), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (53%)
Frame = -1 / +3
Query: 222 PARSVMTKSQAHPSLIQSSPASPVRQRLAMP 130
P+R+ T + P+L SSPASP A P
Sbjct: 25341 PSRAPPTSTYPDPALYLSSPASPAPASAAPP 25433
Score = 25.8 bits (50), Expect = 8.8
Identities = 11/29 (37%), Positives = 17/29 (57%)
Frame = -1 / -1
Query: 213 SVMTKSQAHPSLIQSSPASPVRQRLAMPK 127
S + K + + S Q S ASP QR+ +P+
Sbjct: 8108 SFIYKDRHNISKQQLSAASPAHQRVDIPR 8022
>NCR_G_C2.531 Ncr_G_C2.531
Length = 38188
Score = 28.6 bits (56), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (57%)
Frame = -1 / -1
Query: 219 ARSVMTKSQAHPSLIQSSPASPVRQRLAMPK 127
+R+ + A PSL Q P P+++ AMP+
Sbjct: 28624 SRTTLESKTAQPSLFQRLPRHPLKRL*AMPR 28532
>NCR_G_C2.529 Ncr_G_C2.529
Length = 103305
Score = 28.6 bits (56), Expect = 1.3
Identities = 10/19 (52%), Positives = 13/19 (67%)
Frame = +3 / +1
Query: 120 QGILALLGVDEQDWLDWTG 176
+G+L +G DE D DWTG
Sbjct: 52339 RGLLERMGSDEWDEWDWTG 52395
>NCR_G_C2.204 Ncr_G_C2.204
Length = 73435
Score = 28.6 bits (56), Expect = 1.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 126 ILALLGVDEQDWLDWTGL 179
ILAL+G+ W+ WTG+
Sbjct: 16694 ILALVGLGRNQWMLWTGM 16641
>NCR_G_C2.256 Ncr_G_C2.256
Length = 141304
Score = 28.6 bits (56), Expect = 1.3
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 244 DSVMSQITRPLRHDKIPGS 188
D++ +I+RP+RH K PG+
Sbjct: 13495 DALCVRISRPVRHSKFPGA 13439
>NCR_G_C2.376 Ncr_G_C2.376
Length = 11769
Score = 28.1 bits (55), Expect = 1.8
Identities = 11/29 (37%), Positives = 17/29 (57%)
Frame = -3 / +1
Query: 124 P*RPFTSFNMTHETIQTLNRDALVLRRTA 38
P PFT+ N H +++R + +LRR A
Sbjct: 226 PSSPFTNRNQHHRITASIHRSSSILRRRA 312
>NCR_G_C2.646 Ncr_G_C2.646
Length = 41756
Score = 28.1 bits (55), Expect = 1.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 124 VFWHC*ALTNRTGWT 168
VFWHC* + N+ G T
Sbjct: 2409 VFWHC*IVLNKIGMT 2453
>NCR_G_C2.248 Ncr_G_C2.248
Length = 42139
Score = 27.6 bits (54), Expect(2) = 2.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 111 KGRQGILALLGVDEQDWLDW 170
KGRQ +AL GVDE DW
Sbjct: 35839 KGRQTSVALAGVDEAGPHDW 35780
Score = 18.0 bits (33), Expect(2) = 2.3
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = +2 / -2
Query: 29 YKRSSSPQHESVTVESLNCLMGHV 100
Y P H + T + +CL +V
Sbjct: 35973 YMGHVDPAHPTATGDLESCLQSNV 35902
>NCR_G_C2.130 Ncr_G_C2.130
Length = 35253
Score = 27.6 bits (54), Expect = 2.5
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = +1 / +1
Query: 142 ALTNRTGWTGLD*AWMSLG 198
AL + GW G +* W+ LG
Sbjct: 23338 ALNLKGGWLGSE*MWLYLG 23394
>NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G_C2.022
from base 200001
Length = 110000
Score = 27.6 bits (54), Expect = 2.5
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1 / -3
Query: 186 PSLIQSSPASPVRQRLAMPKYPDALLLLST*PMRQFRLS 70
PSLIQ P R PDA LL++ P R LS
Sbjct: 22659 PSLIQMQPTKEDGTRSKPTLVPDAPLLIANGPCRSPALS 22543
>NCR_G_C2.559 Ncr_G_C2.559
Length = 54441
Score = 27.6 bits (54), Expect = 2.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 163 WTGLD*AWMSLGF 201
WTGLD W+SL F
Sbjct: 8744 WTGLDDTWISLSF 8706
>NCR_G_C2.426 Ncr_G_C2.426
Length = 53350
Score = 27.6 bits (54), Expect = 2.5
Identities = 11/19 (57%), Positives = 14/19 (72%)
Frame = +1 / +3
Query: 13 EELARLQEEQFAAARERHG 69
E+ ARLQEE+ A +RHG
Sbjct: 15228 EDTARLQEERGQAVPDRHG 15284
>NCR_G_C2.151 Ncr_G_C2.151
Length = 130934
Score = 27.2 bits (53), Expect(2) = 2.7
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -1 / +3
Query: 186 PSLIQSSPASPVRQRLAMPKYPDALLLLST*PMRQFRLSTVTLSCC 49
P L S P + P P LST P + R ST T C
Sbjct: 128145 PPLNSSLPVPRAPRVTPQPTTPPPCKTLSTPPSPRVRCSTWTTGCT 128282
Score = 18.0 bits (33), Expect(2) = 2.7
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -1 / +3
Query: 222 PARSVMTKSQAHPSLIQSSPA 160
P+R T P + SSPA
Sbjct: 127995 PSRLGATAINTPPPALSSSPA 128057
>NCR_G_C2.753 Ncr_G_C2.753
Length = 34058
Score = 27.2 bits (53), Expect = 3.4
Identities = 9/32 (28%), Positives = 16/32 (49%)
Frame = +2 / +3
Query: 47 PQHESVTVESLNCLMGHVERSKRASGYFGIAR 142
P H+ + ++ C+ R R G+ G+AR
Sbjct: 32901 PGHQHLALQCPRCVAAFHPRRLRGQGFRGLAR 32996
>NCR_G_C2.107 Ncr_G_C2.107
Length = 97891
Score = 27.2 bits (53), Expect = 3.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1 / +1
Query: 210 VMTKSQAHPSLIQSSPASPVRQRLAM 133
++T + AHP +SSP S R R +
Sbjct: 5080 ILTLTNAHPQKARSSPRSTTRARAGL 5157
>NCR_G_C2.388 Ncr_G_C2.388
Length = 80958
Score = 27.2 bits (53), Expect = 3.4
Identities = 12/18 (66%), Positives = 13/18 (71%)
Frame = +3 / -2
Query: 12 GRARSSTRGAVRRSTRAS 65
G RS TRG+V RSTR S
Sbjct: 20426 GSVRSRTRGSVPRSTRFS 20373
>NCR_G_C2.592 Ncr_G_C2.592
Length = 186696
Score = 27.2 bits (53), Expect = 3.4
Identities = 10/17 (58%), Positives = 12/17 (69%)
Frame = -1 / +1
Query: 204 TKSQAHPSLIQSSPASP 154
T S HPSLI + P+SP
Sbjct: 185977 TNSSIHPSLITNHPSSP 186027
>NCR_G_C2.233 Ncr_G_C2.233
Length = 15106
Score = 27.2 bits (53), Expect = 3.4
Identities = 13/37 (35%), Positives = 20/37 (53%)
Frame = -1 / +1
Query: 231 VR*PARSVMTKSQAHPSLIQSSPASPVRQRLAMPKYP 121
+R P RSV+ S P + + S + +RLA P+ P
Sbjct: 4387 IRRPRRSVLRMSTRTPWTLMA*HQSTIPRRLARPRKP 4497
>NCR_G_C2.655 Ncr_G_C2.655
Length = 36062
Score = 27.2 bits (53), Expect = 3.4
Identities = 9/21 (42%), Positives = 14/21 (65%)
Frame = -3 / -2
Query: 229 QITRPLRHDKIPGSSKPNPVQ 167
Q+ RP+R + G+S P P+Q
Sbjct: 7162 QVNRPVRQGAVHGTSIPTPLQ 7100
>NCR_G_C2.448 Ncr_G_C2.448
Length = 102021
Score = 27.2 bits (53), Expect = 3.4
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3 / +3
Query: 99 LKEVKGRQGILALLGVDEQDWLDWT 173
L++ + RQG + + + E+ W+ WT
Sbjct: 29592 LEKARVRQGRIQTMAMGEKAWIQWT 29666
>NCR_G_C2.099 Ncr_G_C2.099
Length = 83630
Score = 26.7 bits (52), Expect(2) = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 183 SLIQSSPASPVRQRLAMPKYP 121
++I SSPASP R A+P P
Sbjct: 62561 AVIASSPASPPRSASAVPSSP 62623
Score = 18.0 bits (33), Expect(2) = 3.8
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2 / +1
Query: 221 PPAPS*QNP 195
PP PS +P
Sbjct: 62503 PPLPSQSHP 62529
>NCR_G_C2.216 Ncr_G_C2.216
Length = 48088
Score = 26.7 bits (52), Expect = 4.7
Identities = 12/18 (66%), Positives = 13/18 (71%)
Frame = +3 / +1
Query: 6 VHGRARSSTRGAVRRSTR 59
VH R RSS R AV RS+R
Sbjct: 11104 VHARCRSSGRRAVLRSSR 11157
>NCR_G_C2.434 Ncr_G_C2.434
Length = 52670
Score = 26.7 bits (52), Expect = 4.7
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 21 RSSTRGAVRRSTRASR 68
RSSTR + RRSTR SR
Sbjct: 24121 RSSTRTSWRRSTRTSR 24074
>NCR_G_C2.546 Ncr_G_C2.546
Length = 112644
Score = 26.7 bits (52), Expect = 4.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3 / +3
Query: 112 FTSFNMTHETIQTLNRDALVLRRTAPLVDERALPW 8
F + TH I+ + ++L T L ERA PW
Sbjct: 66360 FAALVATHSRIKRSSSLLILLLSTENLAPERAAPW 66464
Score = 25.8 bits (50), Expect = 8.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3 / -1
Query: 138 LGVDEQDWLDWTG 176
+G+DE WL WTG
Sbjct: 112596 IGMDEIAWLRWTG 112558
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 26.7 bits (52), Expect = 4.7
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +3 / +1
Query: 156 DWLDWTGLGLDE 191
DW DWT LG +E
Sbjct: 296512 DWFDWTHLGKEE 296547
Score = 26.7 bits (52), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2 / -3
Query: 98 VERSKRASGYFGIARR*RTGLAGLD 172
+ERSKR S Y G+ + R L +D
Sbjct: 23602 MERSKRESKYMGVPKEAREALQWID 23528
>NCR_G_C2.582 Ncr_G_C2.582
Length = 45833
Score = 26.7 bits (52), Expect = 4.7
Identities = 10/21 (47%), Positives = 15/21 (70%)
Frame = -1 / -3
Query: 99 T*PMRQFRLSTVTLSCCGELL 37
T*P++ FRL ++ + CGE L
Sbjct: 183 T*PIQIFRLCSIPIQLCGESL 121
>NCR_G_C2.019 Ncr_G_C2.019
Length = 128680
Score = 26.7 bits (52), Expect = 4.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 14 KSSLVYKRSSSPQHESVTVESLNCLMG 94
+ SL S+S Q +++ ESL C+ G
Sbjct: 65864 RDSLDCHGSNSSQPQALNCESLGCVAG 65944
>NCR_G_C2.585 Ncr_G_C2.585
Length = 245975
Score = 26.7 bits (52), Expect = 4.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 6 VHGRARSSTRGAVRRSTRASRLR 74
V GRAR R A+RR T + R R
Sbjct: 139904 VEGRARGRRRSAIRRRTGSPR*R 139836
>NCR_G_C2.441 Ncr_G_C2.441
Length = 223615
Score = 26.7 bits (52), Expect = 4.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 159 WLDWTGLGL 185
WLDW GLGL
Sbjct: 43380 WLDWAGLGL 43406
>NCR_G_C2.238 Ncr_G_C2.238
Length = 254242
Score = 26.7 bits (52), Expect = 4.7
Identities = 9/17 (52%), Positives = 13/17 (75%)
Frame = +2 / -3
Query: 29 YKRSSSPQHESVTVESL 79
YKR +P+HE+ VES+
Sbjct: 246257 YKRLDAPRHETTAVESV 246207
>NCR_G_C2.569 Ncr_G_C2.569
Length = 192756
Score = 26.7 bits (52), Expect = 4.7
Identities = 13/29 (44%), Positives = 17/29 (57%)
Frame = -1 / -2
Query: 183 SLIQSSPASPVRQRLAMPKYPDALLLLST 97
S + S PAS + R+ + YP ALL L T
Sbjct: 138320 SAVCSHPASTHQDRVYVRGYPKALLQLGT 138234
>NCR_G_C2.375 Ncr_G_C2.375
Length = 58902
Score = 26.7 bits (52), Expect = 4.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1 / -3
Query: 222 PARSVMTKSQAHPSLIQSSPASPVRQRLAMPKYPDALLLLS 100
P R+ + + SL S+ +SPV LA Y L+ LS
Sbjct: 20977 PLRTSLFSLASPCSLAYSTDSSPVSLSLAYSDYDTELMALS 20855
>NCR_G_C2.564 Ncr_G_C2.564
Length = 150940
Score = 26.7 bits (52), Expect = 4.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2 / +3
Query: 8 PWKSSLVYKRSSSPQHESVTVES 76
PW+ L+ RSSSP +VT S
Sbjct: 97044 PWRRLLLLVRSSSPPPAAVTFSS 97112
Score = 25.8 bits (50), Expect = 8.8
Identities = 9/22 (40%), Positives = 13/22 (58%)
Frame = +3 / -2
Query: 153 QDWLDWTGLGLDEPGILS*RSG 218
++W DW + PG+LS R G
Sbjct: 28545 KEWEDWGRVTGQNPGVLSERGG 28480
>NCR_G_C2.088 Ncr_G_C2.088
Length = 45573
Score = 24.4 bits (47), Expect(2) = 5.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1 / +3
Query: 115 GVRVFWHC*ALTNRTGWTGL 174
G+ W C ALT G G+
Sbjct: 387 GIETMWRCVALTTSRGTLGM 446
Score = 19.8 bits (37), Expect(2) = 5.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 53 HESVTVESLNCL 88
H+S + S+NCL
Sbjct: 251 HQSSALSSVNCL 286
>NCR_G_C2.352 Ncr_G_C2.352
Length = 22244
Score = 26.3 bits (51), Expect = 6.4
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = +3 / -1
Query: 132 ALLGVDEQDWLDWTGLGLDEP 194
ALLG +W W LG+D P
Sbjct: 5174 ALLGPYRGEWKAWAILGMDPP 5112
>NCR_G_C2.192 Ncr_G_C2.192
Length = 20973
Score = 26.3 bits (51), Expect = 6.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1 / +3
Query: 135 MPKYPDALLLLST*PMRQFRLSTVTL 58
+P YP L++ T QF +S+ TL
Sbjct: 10257 LPVYPSVTLIVLTSEEAQFPMSSTTL 10334
>NCR_G_C2.654 Ncr_G_C2.654
Length = 73204
Score = 26.3 bits (51), Expect = 6.4
Identities = 11/24 (45%), Positives = 12/24 (49%)
Frame = +2 / -2
Query: 80 NCLMGHVERSKRASGYFGIARR*R 151
NC GH E K + G ARR R
Sbjct: 66969 NCSHGHQEHGKEPCSHLGRARRHR 66898
>NCR_G_C2.368 Ncr_G_C2.368
Length = 44122
Score = 26.3 bits (51), Expect = 6.4
Identities = 9/21 (42%), Positives = 10/21 (46%)
Frame = +1 / +1
Query: 160 GWTGLD*AWMSLGFCHDGAGG 222
GW+G D W G C G G
Sbjct: 43945 GWSGRDWDWSG*GVCWGGGSG 44007
>NCR_G_C2.775 Ncr_G_C2.775
Length = 60236
Score = 26.3 bits (51), Expect = 6.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3 / +3
Query: 232 SQITRPLRHDKIPGSSKPN 176
SQ+ RP RH++ GS P+
Sbjct: 30825 SQVPRPDRHEQRGGSLLPH 30881
>NCR_G_C2.574 Ncr_G_C2.574
Length = 180542
Score = 26.3 bits (51), Expect = 6.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1 / -1
Query: 121 RVFWHC*ALTNRTGWTGLD*AWMSL 195
RV+WHC L + W WM++
Sbjct: 62264 RVWWHCFRLGI*SSWWFTTMRWMTI 62190
>NCR_G_C2.205 Ncr_G_C2.205
Length = 197179
Score = 26.3 bits (51), Expect = 6.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 157 TGWTGLD*AWM 189
TGWTGLD W+
Sbjct: 49775 TGWTGLDTRWL 49743
>NCR_G_C2.150 Ncr_G_C2.150
Length = 137585
Score = 26.3 bits (51), Expect = 6.4
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 211 RHDKIPGSSKPNP 173
RHD+ PG S+P+P
Sbjct: 31445 RHDRQPGRSRPHP 31483
>NCR_G_C2.692 Ncr_G_C2.692
Length = 31530
Score = 26.3 bits (51), Expect = 6.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1 / +1
Query: 222 PARSVMTKSQAHPSLIQSS 166
P RSV +S+ HPS++ +S
Sbjct: 3580 PTRSVQLRSRNHPSIMSTS 3636
>NCR_G_C2.169 Ncr_G_C2.169
Length = 54533
Score = 26.3 bits (51), Expect = 6.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 77 LNCLMGHVERSKRASGYFGIA 139
L CL+GH RS + S Y IA
Sbjct: 372 LACLLGHCARSVQGSSY*QIA 434
>NCR_G_C2.514 Ncr_G_C2.514
Length = 17724
Score = 26.3 bits (51), Expect = 6.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3 / +1
Query: 217 PLRHDKIPGSSKPN 176
PLR+D+IP SS P+
Sbjct: 7909 PLRNDRIPASSTPH 7950
>NCR_G_C2.053 Ncr_G_C2.053
Length = 105864
Score = 25.8 bits (50), Expect = 8.8
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +2 / +3
Query: 8 PWKSSLVYKRSSSPQHESVTVESLNCLMGHVERSKRAS 121
PW L+Y S +S+TV C++ ++ + S
Sbjct: 90747 PWICKLIYTGSQEQS*QSLTVTDSTCVLRVSQQQEHGS 90860
>NCR_G_C2.690 Ncr_G_C2.690
Length = 112273
Score = 25.8 bits (50), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 174 QSSPASPVRQRLAMPKYPDALLLLS 100
Q P +P A P P ALL+LS
Sbjct: 84750 QRKPPNPPTAPAARPAAPPALLVLS 84676
>NCR_G_C2.586 Ncr_G_C2.586
Length = 49947
Score = 25.8 bits (50), Expect = 8.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / -3
Query: 15 RARSSTRGAVRRSTRASRLR 74
RA ++T GA+RRS R R R
Sbjct: 49096 RAATATAGAIRRSCRYPRSR 49037
>NCR_G_C2.439 Ncr_G_C2.439
Length = 63445
Score = 25.8 bits (50), Expect = 8.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 18 ARSSTRGAVRRSTRASRLR 74
ARSSTRGA RS SR++
Sbjct: 3760 ARSSTRGATVRSYTWSRMK 3704
>NCR_G_C2.404 Ncr_G_C2.404
Length = 264766
Score = 25.8 bits (50), Expect = 8.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / +2
Query: 189 HPSLIQSSPASPVRQRLAMPKYPDALLL 106
HP L Q +R R + +YPD +LL
Sbjct: 121253 HPQLQQLPQTPMLRHRRRVLRYPDLVLL 121336
>NCR_G_C2.065 Ncr_G_C2.065
Length = 67958
Score = 25.8 bits (50), Expect = 8.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / -3
Query: 195 QAHPSLIQSSPASPVRQRLA 136
Q+H IQ+ P SP+RQ ++
Sbjct: 46278 QSHIGTIQTQPTSPLRQSVS 46219
>NCR_G_C2.445 Ncr_G_C2.445
Length = 167464
Score = 25.8 bits (50), Expect = 8.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 13 EELARLQEEQFAAARERHG*ESELS 87
EEL+RL+ + A R ES+L+
Sbjct: 84678 EELSRLESAEAGATDSREEWESQLA 84604
>NCR_G_C2.430 Ncr_G_C2.430
Length = 226714
Score = 25.8 bits (50), Expect = 8.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3 / +1
Query: 241 SVMSQITRPLRHDKIPGSSK 182
+V S +TRPLR +IP S++
Sbjct: 217900 AVTSLLTRPLRRSRIPYSTE 217959
>NCR_G_C2.115 Ncr_G_C2.115
Length = 55252
Score = 25.8 bits (50), Expect = 8.8
Identities = 9/22 (40%), Positives = 15/22 (67%)
Frame = -1 / -2
Query: 186 PSLIQSSPASPVRQRLAMPKYP 121
P+L +SSPASP ++ ++ P
Sbjct: 34722 PALPESSPASPTKEHASLAASP 34657
>NCR_G_C2.433 Ncr_G_C2.433
Length = 43583
Score = 25.8 bits (50), Expect = 8.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -3
Query: 159 WLDWTGLGLD 188
WLDWTG G D
Sbjct: 29220 WLDWTGGGTD 29191
>NCR_G_C2.081 Ncr_G_C2.081
Length = 48897
Score = 25.8 bits (50), Expect = 8.8
Identities = 10/24 (41%), Positives = 13/24 (53%)
Frame = -1 / +3
Query: 210 VMTKSQAHPSLIQSSPASPVRQRL 139
V+ Q H +Q SP P+R RL
Sbjct: 42612 VLPPRQVHSLQVQGSPVPPLRPRL 42683
>NCR_G_C2.116 Ncr_G_C2.116
Length = 72284
Score = 25.8 bits (50), Expect = 8.8
Identities = 9/16 (56%), Positives = 12/16 (74%)
Frame = +2 / +3
Query: 131 GIARR*RTGLAGLDWI 178
G+ R*RTG+ GL W+
Sbjct: 24837 GVVSR*RTGMRGLVWM 24884
>NCR_G_C2.332 Ncr_G_C2.332
Length = 41927
Score = 25.8 bits (50), Expect = 8.8
Identities = 11/26 (42%), Positives = 13/26 (49%)
Frame = -1 / -2
Query: 198 SQAHPSLIQSSPASPVRQRLAMPKYP 121
++A P SSP SP R P YP
Sbjct: 20095 TRASPPSTSSSPPSPPSCRATNPSYP 20018
>NCR_G_C2.681 Ncr_G_C2.681
Length = 124507
Score = 25.8 bits (50), Expect = 8.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 216 RSVMTKSQAHPSLIQSSPASPVRQRLAMPKY 124
RSV +S + PS + AS R++MP +
Sbjct: 25726 RSVFEQSSSSPSSASAPAASTSSNRVSMPSF 25818
>NCR_G_C2.175 Ncr_G_C2.175
Length = 57986
Score = 24.0 bits (46), Expect(2) = 9.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1 / -1
Query: 163 WTGLD*AWMSLGFCHDGAGG 222
WTGLD G+ H G+ G
Sbjct: 23915 WTGLDWTEWGNGWSHSGSPG 23856
Score = 19.4 bits (36), Expect(2) = 9.2
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +3 / -3
Query: 162 LDWTG 176
LDWTG
Sbjct: 23916 LDWTG 23902
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 22790221
Number of Sequences: 995
Number of extensions: 288949
Number of successful extensions: 17235
Number of sequences better than 10.0: 74
length of query: 82
length of database: 12,656,439
effective HSP length: 44
effective length of query: 37
effective length of database: 12,612,659
effective search space: 466668383
effective search space used: 466668383
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 50 (25.8 bits)