TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1609_F09_K1
7ZT.seq
(502 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.258 Ncr_G_C2.258 35 0.036
NCR_G_C2.150 Ncr_G_C2.150 33 0.24
NCR_G_C2.597 Ncr_G_C2.597 31 0.86
NCR_G_C2.043 Ncr_G_C2.043 30 1.2
NCR_G_C2.687 Ncr_G_C2.687 30 1.2
NCR_G_C2.307 Ncr_G_C2.307 30 1.2
NCR_G_C2.042_3 Ncr_G_C2.042_3.seq Continuation (3 of 6) of Ncr_G... 24 1.5
NCR_G_C2.653 Ncr_G_C2.653 30 1.6
NCR_G_C2.588 Ncr_G_C2.588 30 1.6
NCR_G_C2.380 Ncr_G_C2.380 30 1.6
NCR_G_C2.139 Ncr_G_C2.139 24 1.9
NCR_G_C2.550 Ncr_G_C2.550 29 2.2
NCR_G_C2.645 Ncr_G_C2.645 29 2.2
NCR_G_C2.647 Ncr_G_C2.647 29 2.2
NCR_G_C2.022_2 Ncr_G_C2.022_2.seq Continuation (2 of 6) of Ncr_G... 29 2.2
NCR_G_C2.101 Ncr_G_C2.101 29 2.2
NCR_G_C2.845 Ncr_G_C2.845 29 2.2
NCR_G_C2.519 Ncr_G_C2.519 29 2.2
NCR_G_C2.445 Ncr_G_C2.445 29 2.2
NCR_G_C2.197 Ncr_G_C2.197 29 2.2
NCR_G_C2.422 Ncr_G_C2.422 29 2.2
NCR_G_C2.416 Ncr_G_C2.416 29 3.1
NCR_G_C2.535 Ncr_G_C2.535 29 3.1
NCR_G_C2.205 Ncr_G_C2.205 29 3.1
NCR_G_C2.023 Ncr_G_C2.023 29 3.1
NCR_G_C2.320 Ncr_G_C2.320 29 3.1
NCR_G_C2.508 Ncr_G_C2.508 29 3.1
NCR_G_C2.271 Ncr_G_C2.271 29 3.1
NCR_G_C2.640 Ncr_G_C2.640 29 3.1
NCR_G_C2.038 Ncr_G_C2.038 24 3.6
NCR_G_C2.298 Ncr_G_C2.298 29 3.6
NCR_G_C2.321 Ncr_G_C2.321 29 3.6
NCR_G_C2.706 Ncr_G_C2.706 25 3.9
NCR_G_C2.239 Ncr_G_C2.239 24 4.1
NCR_G_C2.219 Ncr_G_C2.219 29 4.2
NCR_G_C2.873 Ncr_G_C2.873 29 4.2
NCR_G_C2.265 Ncr_G_C2.265 29 4.2
NCR_G_C2.125 Ncr_G_C2.125 29 4.2
NCR_G_C2.379 Ncr_G_C2.379 29 4.2
NCR_G_C2.367 Ncr_G_C2.367 29 4.2
NCR_G_C2.068 Ncr_G_C2.068 29 5.0
NCR_G_C2.236 Ncr_G_C2.236 28 5.8
NCR_G_C2.788 Ncr_G_C2.788 28 5.8
NCR_G_C2.164 Ncr_G_C2.164 28 5.8
NCR_G_C2.041 Ncr_G_C2.041 28 5.8
NCR_G_C2.475 Ncr_G_C2.475 28 5.8
NCR_G_C2.110 Ncr_G_C2.110 28 5.8
NCR_G_C2.448 Ncr_G_C2.448 28 5.8
NCR_G_C2.726 Ncr_G_C2.726 28 5.8
NCR_G_C2.249 Ncr_G_C2.249 28 5.8
NCR_G_C2.296 Ncr_G_C2.296 28 5.8
NCR_G_C2.106 Ncr_G_C2.106 22 7.3
NCR_G_C2.568 Ncr_G_C2.568 28 8.0
NCR_G_C2.042_2 Ncr_G_C2.042_2.seq Continuation (2 of 6) of Ncr_G... 28 8.0
NCR_G_C2.042_1 Ncr_G_C2.042_1.seq Continuation (1 of 6) of Ncr_G... 28 8.0
NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G... 28 8.0
NCR_G_C2.225 Ncr_G_C2.225 28 8.0
NCR_G_C2.076 Ncr_G_C2.076 28 8.0
NCR_G_C2.394 Ncr_G_C2.394 28 8.0
NCR_G_C2.111 Ncr_G_C2.111 28 8.0
NCR_G_C2.156 Ncr_G_C2.156 28 8.0
NCR_G_C2.446 Ncr_G_C2.446 23 8.3
NCR_G_C2.054 Ncr_G_C2.054 28 9.3
>NCR_G_C2.258 Ncr_G_C2.258
Length = 28087
Score = 35.4 bits (71), Expect = 0.036
Identities = 15/43 (34%), Positives = 21/43 (47%)
Frame = -2 / +1
Query: 396 CEGRQSENAGLSALGHWCCAQIAQQCPPLVASHNNLPTLGSQV 268
C R E+ G ALGHW Q+ + P L + ++ P G V
Sbjct: 6898 CSERDPEHWGTGALGHWGFTQLVKPTPLLRVNFSDFP*EGDVV 7026
Score = 28.1 bits (55), Expect = 5.8
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +1 / -1
Query: 94 RCQLECGMGCLLMAQAP 144
RCQ+ECG LL A P
Sbjct: 12310 RCQIECGKSSLLAASFP 12260
>NCR_G_C2.150 Ncr_G_C2.150
Length = 137585
Score = 32.7 bits (65), Expect = 0.24
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 363 SALGHWCCAQIAQQCP 316
S GHWCC + A+ CP
Sbjct: 2848 STYGHWCCCRPAEACP 2801
>NCR_G_C2.597 Ncr_G_C2.597
Length = 14233
Score = 30.8 bits (61), Expect = 0.86
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1 / +2
Query: 358 TGSLVLCSDCPTVPSSGCKSQQPAYLRQPSPSHR 257
T S + S + PS+ +S+ PA+ QP+PS R
Sbjct: 7607 TSSSLSPSSLVSYPSTNIRSRTPAFTTQPAPSSR 7708
>NCR_G_C2.043 Ncr_G_C2.043
Length = 199771
Score = 30.4 bits (60), Expect = 1.2
Identities = 11/30 (36%), Positives = 16/30 (52%)
Frame = -2 / +3
Query: 93 SWPPTLGKRMHYCWQQSCRLVATIVHPRTI 4
SW +G R H CW S +++TI R +
Sbjct: 83265 SWQRIMGSRWHGCWLASVCVISTI*ESRGV 83354
Score = 27.6 bits (54), Expect = 8.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1 / +1
Query: 355 GSLVLCSDCPTVPSSGCKSQQPAYLRQPS 269
GSL +C P P GC++ + + PS
Sbjct: 2599 GSLSICPSTPPPPDFGCRTTEVK*IHYPS 2685
>NCR_G_C2.687 Ncr_G_C2.687
Length = 148317
Score = 30.4 bits (60), Expect = 1.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3 / +3
Query: 155 RCSQGACAMSRHPIPHSN*HRVGHQP 78
+CS G ++S+H + HS + V HQP
Sbjct: 66195 QCSFGHRSLSQHMVAHSQRYLVSHQP 66272
>NCR_G_C2.307 Ncr_G_C2.307
Length = 85225
Score = 30.4 bits (60), Expect = 1.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2 / +2
Query: 330 AQQCPPLVASHNNLPTLGSQVQVTD*LNWSMTD 232
A QCPP + LP L + + + L W+MT+
Sbjct: 64223 AAQCPPTTPTTALLPKLATDLPRSSTLRWTMTN 64321
>NCR_G_C2.042_3 Ncr_G_C2.042_3.seq Continuation (3 of 6) of Ncr_G_C2.042
from base 200001
Length = 110000
Score = 24.4 bits (47), Expect(2) = 1.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3 / -1
Query: 332 LPNSALLWLQVTTTCLP*AAKSKSPTN 252
LPN L++ TT C P + + PT+
Sbjct: 59729 LPNDTLIFNNSTTQCNPEKSSALLPTS 59649
Score = 23.5 bits (45), Expect(2) = 1.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3 / -1
Query: 491 IRIGVASGRLCNPYLLRPE 435
+ + +++ R CN YLL PE
Sbjct: 59867 VAV*LSAKRSCNVYLLHPE 59811
>NCR_G_C2.653 Ncr_G_C2.653
Length = 89660
Score = 29.9 bits (59), Expect = 1.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / +2
Query: 81 TLGKRMHYCWQQSCRLVATI 22
T GKR YC + CRL AT+
Sbjct: 35366 TAGKRYRYCTDRRCRL*ATV 35425
>NCR_G_C2.588 Ncr_G_C2.588
Length = 154785
Score = 29.9 bits (59), Expect = 1.6
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = -2 / -2
Query: 390 GRQSENAGLSALGHWCCAQIAQ 325
G ++ GLS LG WCC I +
Sbjct: 92372 GGSRDSCGLSVLGLWCCTCIGE 92307
>NCR_G_C2.380 Ncr_G_C2.380
Length = 179343
Score = 29.9 bits (59), Expect = 1.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2 / -2
Query: 144 GGLRHEQTSHPAF*LTPSWPPTLGKRMHYCWQQSCRLVATI 22
G R S * P++PP H W Q CRLV +I
Sbjct: 159974 GSSRRRSGSSTPL*PRPAFPPGPHIPQHLGWMQWCRLVPSI 159852
>NCR_G_C2.139 Ncr_G_C2.139
Length = 4587
Score = 24.4 bits (47), Expect(2) = 1.9
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +2 / -1
Query: 263 TWTWLPKVGRLL*LATR 313
TWTWL RL LA+R
Sbjct: 3507 TWTWLRSNRRLAVLASR 3457
Score = 23.5 bits (45), Expect(2) = 1.9
Identities = 5/13 (38%), Positives = 5/13 (38%)
Frame = +2 / -1
Query: 116 WDVCSWRRPPDCT 154
W C W P T
Sbjct: 3537 WSCCKWAAIPTWT 3499
>NCR_G_C2.550 Ncr_G_C2.550
Length = 52027
Score = 29.5 bits (58), Expect = 2.2
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 34 CCDHCPPSYHP 2
CC CPPS+HP
Sbjct: 48491 CCCPCPPSFHP 48459
>NCR_G_C2.645 Ncr_G_C2.645
Length = 53172
Score = 29.5 bits (58), Expect = 2.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 398 SIRHSGFMTRYLFLGATGMDYRG 466
SIR GF R+LF+ TG++ RG
Sbjct: 1200 SIRPIGFFIRFLFVEKTGIEPRG 1268
>NCR_G_C2.647 Ncr_G_C2.647
Length = 70271
Score = 29.5 bits (58), Expect = 2.2
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = -2 / -3
Query: 381 SENAGLSALGHWCCAQIAQQCPP 313
+++AG LG W + +QQCPP
Sbjct: 42984 TDSAGCPQLGSWKTSTPSQQCPP 42916
>NCR_G_C2.022_2 Ncr_G_C2.022_2.seq Continuation (2 of 6) of Ncr_G_C2.022
from base 100001
Length = 110000
Score = 29.5 bits (58), Expect = 2.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2 / -2
Query: 63 HYCWQQSCRLVATIVHPRTIL 1
HYCW+ L +TI PR+ L
Sbjct: 44185 HYCWEVKVDLASTIPSPRSSL 44123
>NCR_G_C2.101 Ncr_G_C2.101
Length = 209184
Score = 29.5 bits (58), Expect = 2.2
Identities = 9/21 (42%), Positives = 12/21 (56%)
Frame = -2 / +1
Query: 99 TPSWPPTLGKRMHYCWQQSCR 37
+P +PP L + Y W SCR
Sbjct: 158281 SPRFPPRLSTCLRYLWSSSCR 158343
Score = 28.1 bits (55), Expect = 5.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1 / +2
Query: 319 PSSGCKSQQPAYLRQPSPSHR 257
P + + QQP +QP P+HR
Sbjct: 193553 PPTAAQQQQPQLSQQPQPNHR 193615
>NCR_G_C2.845 Ncr_G_C2.845
Length = 47890
Score = 29.5 bits (58), Expect = 2.2
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = -2 / -1
Query: 93 SWPPTLGKRMHYCWQQSC 40
+WPP R HY W++ C
Sbjct: 13468 AWPPRTRTRWHYQWRRPC 13415
Score = 28.1 bits (55), Expect = 5.8
Identities = 11/39 (28%), Positives = 16/39 (40%)
Frame = -1 / +3
Query: 370 WFIGTGSLVLCSDCPTVPSSGCKSQQPAYLRQPSPSHRL 254
WF L S CP + C + + R P P H++
Sbjct: 43887 WFAPRVIRFLVSGCPCTVQASCFHHRSSCFRVPDPLHQI 44003
>NCR_G_C2.519 Ncr_G_C2.519
Length = 168333
Score = 29.5 bits (58), Expect = 2.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2 / -3
Query: 11 RGWTMVATSRHDCCQQ*CIRLPRVGGQLGVN*NAGWDVCS 130
RG+++VA RHD + C LP G V * C+
Sbjct: 79648 RGFSVVAPHRHDNSRHVCKSLPPTDGVRQVL*PVQLVFCA 79529
>NCR_G_C2.445 Ncr_G_C2.445
Length = 167464
Score = 29.5 bits (58), Expect = 2.2
Identities = 10/34 (29%), Positives = 16/34 (46%)
Frame = -2 / -2
Query: 153 VQSGGLRHEQTSHPAF*LTPSWPPTLGKRMHYCW 52
++ G H P+ P P+ G+ +HYCW
Sbjct: 128190 IRPSGACHYYAPKPSTCRDPISTPSEGRTLHYCW 128089
>NCR_G_C2.197 Ncr_G_C2.197
Length = 75232
Score = 29.5 bits (58), Expect = 2.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1 / +2
Query: 388 PLTIYPSQWLHDQIPISGRNRYGLQRRPEATP 483
P Y SQW H +P R YGL P P
Sbjct: 51695 PWISYSSQWRHAPLPSRQRYCYGLLLHPRHHP 51790
>NCR_G_C2.422 Ncr_G_C2.422
Length = 27484
Score = 29.5 bits (58), Expect = 2.2
Identities = 10/24 (41%), Positives = 14/24 (57%)
Frame = -3 / +1
Query: 149 SQGACAMSRHPIPHSN*HRVGHQP 78
S+ C+ +RHP PH + H H P
Sbjct: 11893 SRRRCSRNRHPHPHPHSHFHSHSP 11964
>NCR_G_C2.416 Ncr_G_C2.416
Length = 188447
Score = 29.0 bits (57), Expect = 3.1
Identities = 14/32 (43%), Positives = 18/32 (55%)
Frame = -1 / -3
Query: 358 TGSLVLCSDCPTVPSSGCKSQQPAYLRQPSPS 263
T +L+L CP +SG SQQ + PSPS
Sbjct: 96885 TPTLLLPLSCPWKENSGPPSQQTSQTPPPSPS 96790
>NCR_G_C2.535 Ncr_G_C2.535
Length = 4854
Score = 29.0 bits (57), Expect = 3.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1 / -2
Query: 4 DGTRVDNGRNKPA*LLPTVVHSFTQGWWPTRCQ 102
DG + G N+P VHS W+PT Q
Sbjct: 1229 DGDKAHEGPNEPCTPHLNAVHSHFDSWYPTPVQ 1131
>NCR_G_C2.205 Ncr_G_C2.205
Length = 197179
Score = 29.0 bits (57), Expect = 3.1
Identities = 10/34 (29%), Positives = 14/34 (40%)
Frame = -2 / +3
Query: 396 CEGRQSENAGLSALGHWCCAQIAQQCPPLVASHN 295
C R++ G WCC + P L A H+
Sbjct: 102681 CRTRRARQRAPQRQGRWCCQAGSHPSPHLCAKHD 102782
Score = 24.0 bits (46), Expect(2) = 4.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / +3
Query: 228 CLACLTLLSSF 196
CL C TL+S F
Sbjct: 189330 CLLC*TLMSRF 189362
Score = 22.1 bits (42), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 9/12 (74%)
Frame = -3 / +3
Query: 377 KMLVYRHWVIGA 342
+M+VYR W I A
Sbjct: 189246 RMVVYRFWAISA 189281
>NCR_G_C2.023 Ncr_G_C2.023
Length = 117328
Score = 29.0 bits (57), Expect = 3.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1 / -1
Query: 376 KCWFIGTGSLVLCSDCPTVPSSGCK 302
+CW G + C CP SS C+
Sbjct: 115702 ECWIAGAS*MCYCRRCPGTESSCCR 115628
>NCR_G_C2.320 Ncr_G_C2.320
Length = 80443
Score = 29.0 bits (57), Expect = 3.1
Identities = 9/17 (52%), Positives = 12/17 (69%)
Frame = -2 / -2
Query: 246 WSMTDICLACLTLLSSF 196
W + +CL CL LL+SF
Sbjct: 18966 WQLAGLCLLCLILLTSF 18916
>NCR_G_C2.508 Ncr_G_C2.508
Length = 105197
Score = 29.0 bits (57), Expect = 3.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1 / +3
Query: 379 RLSPLTIYPSQWLHDQIPI 435
R PL I P W HD PI
Sbjct: 71424 RYHPLKICPCNWRHDSSPI 71480
>NCR_G_C2.271 Ncr_G_C2.271
Length = 96618
Score = 29.0 bits (57), Expect = 3.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / -1
Query: 116 WDVCSWRRPPDCTWPA 163
+DV W PPDC W A
Sbjct: 59649 YDVGIWSDPPDCPWQA 59602
Score = 27.6 bits (54), Expect = 8.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3 / +3
Query: 128 SRHPIPHSN*HRVGHQPWVNECTTVGNSHAGLLRPLSTLVP 6
S P+P S H HQP V+ T + H LL+ L+P
Sbjct: 46050 SSSPLPSSLHHHHHHQPSVHHQTPPPHHHHHLLQLSPLLLP 46172
>NCR_G_C2.640 Ncr_G_C2.640
Length = 147149
Score = 29.0 bits (57), Expect = 3.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 113 GWDVCSWRRPP 145
GW +C WR+PP
Sbjct: 9279 GWVICEWRQPP 9311
>NCR_G_C2.038 Ncr_G_C2.038
Length = 68631
Score = 24.4 bits (47), Expect(2) = 3.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 317 LLWLQVTTTCLP*AAKSKSP 258
LLWL + + CLP A +P
Sbjct: 25034 LLWLMLLSRCLPSAPPPAAP 25093
Score = 22.1 bits (42), Expect(2) = 3.6
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = -2 / +3
Query: 369 GLSALGHWCC 340
G+ G WCC
Sbjct: 24978 GMEVAGFWCC 25007
>NCR_G_C2.298 Ncr_G_C2.298
Length = 253576
Score = 29.0 bits (57), Expect = 3.6
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3 / +2
Query: 24 WSQQAGMTVANSSAFVYPGLVANSVSIRMRDGMSAHGAGPLTAP 155
W ++ + + S + Y ++ +SVS + + + PLTAP
Sbjct: 7682 WRRRRSLAIDPSESCAYSSIINSSVSPSLSECWETNRLSPLTAP 7813
>NCR_G_C2.321 Ncr_G_C2.321
Length = 66076
Score = 29.0 bits (57), Expect = 3.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3 / +3
Query: 300 DLQPEEGTVGQSEHSTNDPVPINQHFQTVSPHNLSVTVAS*PDTYF 437
DLQP G++ H P+ ++QHFQ + + A P F
Sbjct: 18918 DLQPPAGSLYLPPHP*ARPILVSQHFQVNNCEQAKILYAPFPAPSF 19055
>NCR_G_C2.706 Ncr_G_C2.706
Length = 27623
Score = 25.3 bits (49), Expect(2) = 3.9
Identities = 9/21 (42%), Positives = 12/21 (56%)
Frame = -1 / +2
Query: 328 PTVPSSGCKSQQPAYLRQPSP 266
PT PSS + P + QP+P
Sbjct: 9689 PTTPSSAAPAVDPTPVTQPAP 9751
Score = 21.2 bits (40), Expect(2) = 3.9
Identities = 4/11 (36%), Positives = 7/11 (63%)
Frame = -2 / +1
Query: 348 WCCAQIAQQCP 316
+CC+ +A C
Sbjct: 9547 YCCSSVAFSCS 9579
>NCR_G_C2.239 Ncr_G_C2.239
Length = 49522
Score = 23.5 bits (45), Expect(3) = 4.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 152 CSQGACAMSRHPIPHS 105
CS+ A +S HP+P S
Sbjct: 2891 CSRAASPVSSHPLPCS 2844
Score = 22.1 bits (42), Expect(3) = 4.1
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -3 / -3
Query: 89 GHQPWVNECTTV 54
GHQ W C++V
Sbjct: 2819 GHQQWQGSCSSV 2784
Score = 18.5 bits (34), Expect(3) = 4.1
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3 / -3
Query: 65 CTTVGNSHAGLLRP 24
CT VG + G RP
Sbjct: 2768 CTEVGATLRGCRRP 2727
>NCR_G_C2.219 Ncr_G_C2.219
Length = 282514
Score = 28.6 bits (56), Expect = 4.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3 / -1
Query: 155 RCSQGACAMSRHPIPHSN*HRVGHQPWV 72
RC G R PH GHQPWV
Sbjct: 153682 RCCYGGPLFVRKRYPHLGK*SSGHQPWV 153599
Score = 27.6 bits (54), Expect = 8.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2 / -1
Query: 86 GQLGVN*NAGWDVCSWRRPP 145
G++G *N + VC+WR P
Sbjct: 277627 GEIGRR*NRAYSVCAWRGGP 277568
>NCR_G_C2.873 Ncr_G_C2.873
Length = 38390
Score = 28.6 bits (56), Expect = 4.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2 / +1
Query: 351 HWCCAQIAQQCPP 313
HWCC AQQ P
Sbjct: 30658 HWCCWHTAQQASP 30696
>NCR_G_C2.265 Ncr_G_C2.265
Length = 91342
Score = 28.6 bits (56), Expect = 4.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3 / -2
Query: 161 QARCSQGACAMSRHPIPHSN*HRVGHQPWV 72
Q RC +G C + R I +N QPWV
Sbjct: 41514 QRRCLEGGCLLCRRTICDANVVLRHDQPWV 41425
>NCR_G_C2.125 Ncr_G_C2.125
Length = 138790
Score = 28.6 bits (56), Expect = 4.2
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = -2 / +2
Query: 390 GRQSENAGLSALGHWCC 340
GRQS+ G+S WCC
Sbjct: 87701 GRQSQQPGVSGTKAWCC 87751
>NCR_G_C2.379 Ncr_G_C2.379
Length = 245776
Score = 28.6 bits (56), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3 / -3
Query: 443 RPEIGIWS*SHCDG*IVRGDSLKMLVYRHWVIGAV 339
RP +G + + * VRGDS+ V R WV G +
Sbjct: 102101 RPSLGS*TAASTPA*AVRGDSMYGNVRRCWVFGGI 101997
Score = 27.6 bits (54), Expect = 8.0
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2 / -1
Query: 116 WDVCSWRRPPDCTWP 160
W V WR P TWP
Sbjct: 90898 WTVADWRAPSSETWP 90854
>NCR_G_C2.367 Ncr_G_C2.367
Length = 88285
Score = 28.6 bits (56), Expect = 4.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2 / +2
Query: 348 WCCAQIAQQCPPLVASHNNLPTLGSQVQVTD*LNWSMTDI 229
WC Q PP +A N+PT Q+ + L D+
Sbjct: 19070 WCVPTDRQCVPPFLA*PGNIPTFNGQLHLRKSLQAGSLDV 19189
>NCR_G_C2.068 Ncr_G_C2.068
Length = 163893
Score = 28.6 bits (56), Expect = 5.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3 / -1
Query: 69 VYPGLVANSVSIRMRDGMSAHGAGPL 146
++PGLVA+ +S R R +S GPL
Sbjct: 110715 MFPGLVADILSFRRRRWLSRVAIGPL 110638
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 28.1 bits (55), Expect = 5.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2 / -3
Query: 402 IDCEGRQSENAGLSALGHWCCAQ 334
+D +GR GL A+G WC +
Sbjct: 6088 MDVQGRGEVPVGLMAMGEWCAEE 6020
>NCR_G_C2.788 Ncr_G_C2.788
Length = 27212
Score = 28.1 bits (55), Expect = 5.8
Identities = 13/42 (30%), Positives = 20/42 (46%)
Frame = -3 / -1
Query: 137 CAMSRHPIPHSN*HRVGHQPWVNECTTVGNSHAGLLRPLSTL 12
C + + HS HR+ P +C++V LRP S+L
Sbjct: 13988 CLAKKADVSHSMLHRLSVTPQDTDCSSVVTLQPSPLRP*SSL 13863
>NCR_G_C2.164 Ncr_G_C2.164
Length = 75564
Score = 28.1 bits (55), Expect = 5.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 430 PISGRNRYGLQRRPEA 477
P+ G+NRYG Q +P++
Sbjct: 61610 PVQGQNRYGAQNQPKS 61563
>NCR_G_C2.041 Ncr_G_C2.041
Length = 93302
Score = 28.1 bits (55), Expect = 5.8
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1 / -2
Query: 76 QGWWPTRCQLECG 114
+ WWP C+ +CG
Sbjct: 28684 EAWWPCGCERDCG 28646
>NCR_G_C2.475 Ncr_G_C2.475
Length = 39686
Score = 28.1 bits (55), Expect = 5.8
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2 / +2
Query: 398 SIRHSGFMTRYLFLGATGMDYRG 466
SI GF+TR+LF+ +G++ RG
Sbjct: 19469 SIGPIGFVTRFLFIEKSGIEPRG 19537
>NCR_G_C2.110 Ncr_G_C2.110
Length = 102633
Score = 28.1 bits (55), Expect = 5.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / -3
Query: 75 GKRMHYCWQQSCRLVATI 22
GKR HY WQ C + T+
Sbjct: 17467 GKRGHYSWQGGCPWLGTL 17414
>NCR_G_C2.448 Ncr_G_C2.448
Length = 102021
Score = 28.1 bits (55), Expect = 5.8
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = +1 / +3
Query: 412 WLHDQIPISGRNRYGLQR 465
+LH P+ GRNRY L+R
Sbjct: 19374 YLHAPCPLHGRNRYHLRR 19427
>NCR_G_C2.726 Ncr_G_C2.726
Length = 11402
Score = 28.1 bits (55), Expect = 5.8
Identities = 11/29 (37%), Positives = 15/29 (50%)
Frame = +1 / -3
Query: 406 SQWLHDQIPISGRNRYGLQRRPEATPIRI 492
S W + + ISGR R RP TP+ +
Sbjct: 8400 SHWRRNFVHISGRRRISCAARPLRTPLLV 8314
>NCR_G_C2.249 Ncr_G_C2.249
Length = 18606
Score = 28.1 bits (55), Expect = 5.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1 / -2
Query: 82 WWPTRCQLECGMGCLL 129
WWP RC CLL
Sbjct: 140 WWPWRCTTAASSSCLL 93
>NCR_G_C2.296 Ncr_G_C2.296
Length = 137551
Score = 28.1 bits (55), Expect = 5.8
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +1 / -3
Query: 301 TCNQRRALLGNLSTAPMTQCR*TSIFRLSPLT 396
TC+ +L L T+P + CR TS R +P T
Sbjct: 29117 TCDSVDSLKYQLETSPSSSCRRTSATRRTPGT 29022
Score = 27.6 bits (54), Expect = 9.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 423 PDTYFWAQQVWITEATRGNPYSY 491
PDT A Q WI T+G+ ++Y
Sbjct: 42395 PDTIASAWQSWIGNVTKGSTFAY 42327
>NCR_G_C2.106 Ncr_G_C2.106
Length = 177512
Score = 22.1 bits (42), Expect(3) = 7.3
Identities = 5/11 (45%), Positives = 5/11 (45%)
Frame = +2 / +3
Query: 125 CSWRRPPDCTW 157
C WR P W
Sbjct: 49578 CCWRHQPQEGW 49610
Score = 21.7 bits (41), Expect(3) = 7.3
Identities = 9/26 (34%), Positives = 12/26 (45%)
Frame = +1 / +3
Query: 196 ERGEQSQACKANVSHRPIQLVGDLDL 273
ERG Q C + RP+ + D L
Sbjct: 49647 ERGCQGDRCYCHRHFRPVSTLRDTSL 49724
Score = 18.9 bits (35), Expect(3) = 7.3
Identities = 4/5 (80%), Positives = 4/5 (80%)
Frame = +2 / +3
Query: 35 SRHDC 49
SRH C
Sbjct: 49566 SRHQC 49580
>NCR_G_C2.568 Ncr_G_C2.568
Length = 267169
Score = 27.6 bits (54), Expect = 8.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 125 CSWRRPPDCTW 157
C WR+P DC+W
Sbjct: 8058 CYWRQPFDCSW 8026
Score = 25.8 bits (50), Expect(2) = 9.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2 / -3
Query: 351 HWCCAQIAQQCPPLVASHNNLPTLG 277
H CC Q+ Q + S N+L + G
Sbjct: 190814 HTCCEQVG*QTSSYIGSENDLASSG 190740
Score = 18.9 bits (35), Expect(2) = 9.0
Identities = 4/5 (80%), Positives = 4/5 (80%)
Frame = -1 / -3
Query: 454 HTCCA 440
HTCC
Sbjct: 190814 HTCCE 190800
>NCR_G_C2.042_2 Ncr_G_C2.042_2.seq Continuation (2 of 6) of
Ncr_G_C2.042 from base 100001
Length = 110000
Score = 27.6 bits (54), Expect = 8.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -2
Query: 343 LCSDCPTVPSSGCKSQQP 290
L CP+ PS+GC S P
Sbjct: 4291 LIMPCPSPPSNGCSSSSP 4238
Score = 27.6 bits (54), Expect = 8.0
Identities = 9/26 (34%), Positives = 16/26 (60%)
Frame = -2 / +2
Query: 393 EGRQSENAGLSALGHWCCAQIAQQCP 316
+ R +++ G+ A+ C +AQQCP
Sbjct: 56933 DDRHTDSGGVPAIASRWCVFLAQQCP 57010
>NCR_G_C2.042_1 Ncr_G_C2.042_1.seq Continuation (1 of 6) of Ncr_G_C2.042
from base 1
Length = 110000
Score = 27.6 bits (54), Expect = 8.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -1
Query: 343 LCSDCPTVPSSGCKSQQP 290
L CP+ PS+GC S P
Sbjct: 104291 LIMPCPSPPSNGCSSSSP 104238
>NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G_C2.022
from base 200001
Length = 110000
Score = 27.6 bits (54), Expect = 8.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 339 AQIAQQCPPLVASHNNLPTL 280
+Q+A CPP V H LPT+
Sbjct: 39642 SQLAILCPPKVPRHMELPTM 39583
>NCR_G_C2.225 Ncr_G_C2.225
Length = 107875
Score = 27.6 bits (54), Expect = 8.0
Identities = 15/43 (34%), Positives = 20/43 (45%)
Frame = -1 / -1
Query: 376 KCWFIGTGSLVLCSDCPTVPSSGCKSQQPAYLRQPSPSHRLIE 248
+C F TG + CPT G S YL +PSP + I+
Sbjct: 73252 ECRF*TTGLMRFS*VCPTFERRGPDSFHVHYLSKPSPPSQPID 73124
>NCR_G_C2.076 Ncr_G_C2.076
Length = 241344
Score = 27.6 bits (54), Expect = 8.0
Identities = 11/32 (34%), Positives = 18/32 (55%)
Frame = +1 / +1
Query: 379 RLSPLTIYPSQWLHDQIPISGRNRYGLQRRPE 474
RLSP + P + + + R++ G QRRP+
Sbjct: 238810 RLSPRSALPRSKIRGRTEVPPRSKRGSQRRPQ 238905
>NCR_G_C2.394 Ncr_G_C2.394
Length = 74819
Score = 27.6 bits (54), Expect = 8.0
Identities = 11/31 (35%), Positives = 15/31 (47%)
Frame = -1 / +3
Query: 361 GTGSLVLCSDCPTVPSSGCKSQQPAYLRQPS 269
G G + C+DCP S C S A +P+
Sbjct: 38892 GGGDQISCTDCPLSSSDNC*SAGQAAYCKPN 38984
>NCR_G_C2.111 Ncr_G_C2.111
Length = 322912
Score = 27.6 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -1 / -3
Query: 52 ATVMPACCDHCPPSYHP 2
AT P+C H PP HP
Sbjct: 249491 ATPRPSCSPHHPPKVHP 249441
>NCR_G_C2.156 Ncr_G_C2.156
Length = 67929
Score = 27.6 bits (54), Expect = 8.0
Identities = 13/39 (33%), Positives = 16/39 (40%)
Frame = -2 / +3
Query: 399 DCEGRQSENAGLSALGHWCCAQIAQQCPPLVASHNNLPT 283
D EG + G WCC +A Q P S+ PT
Sbjct: 14871 DYEGEAPRDGPHRVAG*WCCWCVAGQ*APSYFSYAPSPT 14987
>NCR_G_C2.446 Ncr_G_C2.446
Length = 145200
Score = 22.6 bits (43), Expect(2) = 8.3
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1 / +3
Query: 406 SQWLHDQIPISGRNRYGLQRRPEATP 483
++W ++P R GL R+P + P
Sbjct: 91641 TRWRTPELPTRKRPISGLMRKPTSDP 91718
Score = 22.6 bits (43), Expect(2) = 8.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3 / +2
Query: 303 LQPEEGTVGQSEHSTND 353
L P+E VG+ E + D
Sbjct: 91604 LLPDEMVVGEDEDAVED 91654
>NCR_G_C2.054 Ncr_G_C2.054
Length = 33329
Score = 27.6 bits (54), Expect = 9.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3 / -3
Query: 6 WYEGGQWSQQAGMTVANSSAFVYPGLV 86
WYE +W+ ++ + SS V G+V
Sbjct: 8694 WYESSRWAMRSSFCLRRSSVVVGVGVV 8614
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 58579080
Number of Sequences: 995
Number of extensions: 997509
Number of successful extensions: 60899
Number of sequences better than 10.0: 63
length of query: 167
length of database: 12,656,439
effective HSP length: 47
effective length of query: 119
effective length of database: 12,609,674
effective search space: 1500551206
effective search space used: 1500551206
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)