TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1609_G02_M0
3ZT.seq
(398 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.176 Ncr_G_C2.176 34 0.095
NCR_G_C2.331 Ncr_G_C2.331 33 0.13
NCR_G_C2.306 Ncr_G_C2.306 32 0.25
NCR_G_C2.342 Ncr_G_C2.342 32 0.34
NCR_G_C2.025 Ncr_G_C2.025 30 0.88
NCR_G_C2.033 Ncr_G_C2.033 30 0.88
NCR_G_C2.741 Ncr_G_C2.741 30 1.2
NCR_G_C2.701 Ncr_G_C2.701 30 1.2
NCR_G_C2.058 Ncr_G_C2.058 30 1.2
NCR_G_C2.203 Ncr_G_C2.203 29 1.7
NCR_G_C2.263 Ncr_G_C2.263 29 1.7
NCR_G_C2.579 Ncr_G_C2.579 29 1.7
NCR_G_C2.647 Ncr_G_C2.647 29 1.7
NCR_G_C2.574 Ncr_G_C2.574 29 1.7
NCR_G_C2.037 Ncr_G_C2.037 25 2.1
NCR_G_C2.739 Ncr_G_C2.739 29 2.3
NCR_G_C2.202 Ncr_G_C2.202 29 2.3
NCR_G_C2.298 Ncr_G_C2.298 29 2.3
NCR_G_C2.570 Ncr_G_C2.570 27 2.7
NCR_G_C2.208 Ncr_G_C2.208 29 3.1
NCR_G_C2.503 Ncr_G_C2.503 29 3.1
NCR_G_C2.404 Ncr_G_C2.404 29 3.1
NCR_G_C2.448 Ncr_G_C2.448 29 3.1
NCR_G_C2.423 Ncr_G_C2.423 29 3.1
NCR_G_C2.271 Ncr_G_C2.271 29 3.1
NCR_G_C2.714 Ncr_G_C2.714 29 3.1
NCR_G_C2.086 Ncr_G_C2.086 24 3.4
NCR_G_C2.190 Ncr_G_C2.190 25 4.1
NCR_G_C2.663 Ncr_G_C2.663 28 4.3
NCR_G_C2.101 Ncr_G_C2.101 28 4.3
NCR_G_C2.215 Ncr_G_C2.215 28 4.3
NCR_G_C2.245 Ncr_G_C2.245 28 4.3
NCR_G_C2.168 Ncr_G_C2.168 28 4.3
NCR_G_C2.489 Ncr_G_C2.489 28 4.8
NCR_G_C2.088 Ncr_G_C2.088 28 5.0
NCR_G_C2.458 Ncr_G_C2.458 28 5.9
NCR_G_C2.217 Ncr_G_C2.217 28 5.9
NCR_G_C2.673 Ncr_G_C2.673 28 5.9
NCR_G_C2.043 Ncr_G_C2.043 28 5.9
NCR_G_C2.131 Ncr_G_C2.131 28 5.9
NCR_G_C2.723 Ncr_G_C2.723 28 5.9
NCR_G_C2.802 Ncr_G_C2.802 28 5.9
NCR_G_C2.452 Ncr_G_C2.452 28 5.9
NCR_G_C2.803 Ncr_G_C2.803 28 5.9
NCR_G_C2.364 Ncr_G_C2.364 28 5.9
NCR_G_C2.225 Ncr_G_C2.225 28 5.9
NCR_G_C2.668 Ncr_G_C2.668 28 5.9
NCR_G_C2.205 Ncr_G_C2.205 23 7.2
NCR_G_C2.327 Ncr_G_C2.327 27 8.1
NCR_G_C2.800 Ncr_G_C2.800 27 8.1
NCR_G_C2.687 Ncr_G_C2.687 27 8.1
NCR_G_C2.509 Ncr_G_C2.509 27 8.1
NCR_G_C2.112 Ncr_G_C2.112 27 8.1
NCR_G_C2.629 Ncr_G_C2.629 27 8.1
NCR_G_C2.151 Ncr_G_C2.151 27 8.1
NCR_G_C2.340 Ncr_G_C2.340 27 8.1
NCR_G_C2.265 Ncr_G_C2.265 27 8.1
NCR_G_C2.106 Ncr_G_C2.106 27 8.1
NCR_G_C2.310 Ncr_G_C2.310 27 8.1
NCR_G_C2.230 Ncr_G_C2.230 27 8.1
NCR_G_C2.095 Ncr_G_C2.095 27 8.1
NCR_G_C2.054 Ncr_G_C2.054 27 8.1
NCR_G_C2.007 Ncr_G_C2.007 27 8.1
NCR_G_C2.296 Ncr_G_C2.296 27 8.1
NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G... 27 8.1
NCR_G_C2.349 Ncr_G_C2.349 27 8.1
NCR_G_C2.308 Ncr_G_C2.308 27 8.1
NCR_G_C2.630 Ncr_G_C2.630 27 8.1
>NCR_G_C2.176 Ncr_G_C2.176
Length = 48427
Score = 33.6 bits (67), Expect = 0.095
Identities = 14/32 (43%), Positives = 17/32 (52%)
Frame = -2 / +1
Query: 343 SITSPRWSSYKEDLKRRWISLEKTCDCRPTRF 248
S T+ RWSS K + R +S T CR RF
Sbjct: 20527 SETTARWSSTKASMSSRCLSPTPTRACRCKRF 20622
Score = 23.5 bits (45), Expect(2) = 3.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3 / -3
Query: 9 IMRSSAPFSLKSHQTSKA*KGTDSPH 86
+ RS+ P +S +SKA K SP
Sbjct: 38405 LSRSTPPAPPRSFPSSKACKTASSPS 38328
Score = 22.6 bits (43), Expect(2) = 3.8
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = +2 / -3
Query: 137 TRIWRFTRCRRSS 175
T WRFTR +SS
Sbjct: 38276 TTFWRFTRLPKSS 38238
>NCR_G_C2.331 Ncr_G_C2.331
Length = 34803
Score = 33.1 bits (66), Expect = 0.13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 92 PSIFYPHSHQDGVLVTRI 145
P +F PHSH DG+L TR+
Sbjct: 22310 PVVFPPHSHSDGLLSTRV 22363
>NCR_G_C2.306 Ncr_G_C2.306
Length = 32917
Score = 32.2 bits (64), Expect = 0.25
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1 / -1
Query: 100 ILSTFPPRWSPCHSHLAFYP 159
+LS FPP SP H H +YP
Sbjct: 15331 LLSIFPPASSPSHPHKKYYP 15272
>NCR_G_C2.342 Ncr_G_C2.342
Length = 52841
Score = 31.8 bits (63), Expect = 0.34
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = +1 / -1
Query: 100 ILSTFPPRWSPCHSH 144
+LS PPR SPCHSH
Sbjct: 17942 VLSIQPPRASPCHSH 17898
>NCR_G_C2.025 Ncr_G_C2.025
Length = 57588
Score = 30.4 bits (60), Expect = 0.88
Identities = 11/32 (34%), Positives = 18/32 (55%)
Frame = +2 / -1
Query: 35 PQKSSNK*GLKRNRFPASSPSIFYPHSHQDGV 130
P KS ++ + R + +PS+ Y H H DG+
Sbjct: 45594 PSKSPSQLAITRYACFSLAPSLLYKHQHHDGI 45499
Score = 29.0 bits (57), Expect = 2.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2 / -3
Query: 211 SLSFLRTTLQVFTASPTTGKTPNAS 137
++S+ + TL VFTA+ +TG+ P A+
Sbjct: 46108 TVSYTQDTLIVFTAASSTGRHPRAN 46034
>NCR_G_C2.033 Ncr_G_C2.033
Length = 166617
Score = 30.4 bits (60), Expect = 0.88
Identities = 10/28 (35%), Positives = 18/28 (63%)
Frame = -2 / +2
Query: 394 IPSSRYWLVHLG*SWSFSITSPRWSSYK 311
+P WLV + *+W+ SPRW++++
Sbjct: 131480 LPWGLVWLVRMR*TWAPRGVSPRWTTWR 131563
Score = 28.6 bits (56), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2 / -1
Query: 271 CDCRPTRFCTRRSSRE*WRK 212
C CR R C RR *WRK
Sbjct: 37050 CRCRRCRDCRRRKGLG*WRK 36991
>NCR_G_C2.741 Ncr_G_C2.741
Length = 27510
Score = 29.9 bits (59), Expect = 1.2
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = +3 / +1
Query: 147 GVLPVVGEAVKTCRVVRRKLKLFRHYSRELRRVQKR 254
G P+ +TCR VRR + S LRRV R
Sbjct: 22573 GDCPIFRRRARTCRSVRRPPRAVMQVSSSLRRVGSR 22680
>NCR_G_C2.701 Ncr_G_C2.701
Length = 74456
Score = 29.9 bits (59), Expect = 1.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2 / -3
Query: 343 SITSPRWSSYKEDLKRRWISLEKTCDCRPTRFC 245
+++ +W S + ++ RW S T RPTR C
Sbjct: 68514 AVSGGKWRSSLDVVEPRW*STTPTATSRPTRSC 68416
>NCR_G_C2.058 Ncr_G_C2.058
Length = 62744
Score = 29.9 bits (59), Expect = 1.2
Identities = 11/34 (32%), Positives = 17/34 (49%)
Frame = -2 / -1
Query: 331 PRWSSYKEDLKRRWISLEKTCDCRPTRFCTRRSS 230
P+W + E++ + W + TC C R C R S
Sbjct: 35645 PQWPNCDEEVSQVWSTRVATCWCETFRRCLMRVS 35544
>NCR_G_C2.203 Ncr_G_C2.203
Length = 128723
Score = 29.5 bits (58), Expect = 1.7
Identities = 17/46 (36%), Positives = 22/46 (46%)
Frame = +3 / -2
Query: 102 SIHIPTKMESLSLAFGVLPVVGEAVKTCRVVRRKLKLFRHYSRELR 239
S H P + +L AF + PVV V VV +LK R +LR
Sbjct: 31885 SSHGPFEFRALRTAFLLFPVVVVVVVVVIVVTHRLKRRRQ*RHKLR 31748
Score = 27.2 bits (53), Expect = 8.1
Identities = 12/22 (54%), Positives = 15/22 (67%)
Frame = -1 / +3
Query: 386 LKILARPFRMILVL*HHLPEVV 321
L+ L RP ++ILVL HH VV
Sbjct: 7101 LRWLLRPRQLILVLLHHHSSVV 7166
>NCR_G_C2.263 Ncr_G_C2.263
Length = 20310
Score = 29.5 bits (58), Expect = 1.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2 / +1
Query: 5 LHHAQFSSFQPQKSSNK*GLKRNRFPASSPSIFYP 109
LHH SF PQ + L R R +SPS+ +P
Sbjct: 13879 LHHQPPLSFHPQLRPRRTRLLRPRSSITSPSLCFP 13983
>NCR_G_C2.579 Ncr_G_C2.579
Length = 3308
Score = 29.5 bits (58), Expect = 1.7
Identities = 14/44 (31%), Positives = 21/44 (46%)
Frame = +1 / +2
Query: 205 SNSFAIIPESYGEYKNESVDNRKSFPTKSIFS*DLLCKMTTSGR 336
+N +IP G K ++ K +PTK+ S C + T GR
Sbjct: 710 NNKPKVIPSEVGLNKKDNTSYIKYYPTKNYPSIQYNCNLITIGR 841
>NCR_G_C2.647 Ncr_G_C2.647
Length = 70271
Score = 29.5 bits (58), Expect = 1.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3 / +1
Query: 336 VMLKDQDHPKWTSQYLEDGMR 398
+MLK+Q HP Y+ DGMR
Sbjct: 18097 LMLKEQTHPDCDVLYVRDGMR 18159
>NCR_G_C2.574 Ncr_G_C2.574
Length = 180542
Score = 29.5 bits (58), Expect = 1.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1 / +1
Query: 76 IPRIQPVNILSTFPPRWSPCHSHLAFYPL 162
+PR++P+++L F S C F+PL
Sbjct: 165400 LPRVKPLSVLFPFRHELSTCLRRCVFFPL 165486
Score = 27.6 bits (54), Expect = 5.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3 / +3
Query: 183 RFSLLRRQRVKRQMRVTRTPS 121
RFSL + R +R++R PS
Sbjct: 161682 RFSLFSSVNLPRPLRLSRPPS 161744
Score = 27.2 bits (53), Expect = 8.1
Identities = 9/21 (42%), Positives = 14/21 (65%)
Frame = +2 / -1
Query: 83 ASSPSIFYPHSHQDGVLVTRI 145
ASS ++ +PHSH +L T +
Sbjct: 73919 ASSSTVVHPHSHSHAILSTAL 73857
>NCR_G_C2.037 Ncr_G_C2.037
Length = 55136
Score = 25.3 bits (49), Expect(2) = 2.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3 / +3
Query: 168 RRQRVKRQMRVTRTPSWWE 112
R+Q V ++ R RTP W
Sbjct: 45900 RKQAVGKRPRFRRTPRRWA 45956
Score = 21.7 bits (41), Expect(2) = 2.1
Identities = 5/13 (38%), Positives = 7/13 (53%)
Frame = -2 / +3
Query: 292 WISLEKTCDCRPT 254
W + + CRPT
Sbjct: 45744 WFAWRTSASCRPT 45782
>NCR_G_C2.739 Ncr_G_C2.739
Length = 74477
Score = 29.0 bits (57), Expect = 2.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2 / -3
Query: 295 RWISLEKTCDCRPTRFCTRRSSR 227
RW + E+ C CRP + T R +R
Sbjct: 55563 RWTARERRCWCRPPAWSTPRRAR 55495
>NCR_G_C2.202 Ncr_G_C2.202
Length = 148112
Score = 29.0 bits (57), Expect = 2.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 334 SPRWSSYKEDLKRRWISLEKTCDCRPTRFCTRRSS 230
+P SS+ +R + + +CRP CTRRS+
Sbjct: 17099 TP*ISSHAPKTRRSQLRSRRKLNCRPVAECTRRSA 16995
>NCR_G_C2.298 Ncr_G_C2.298
Length = 253576
Score = 29.0 bits (57), Expect = 2.3
Identities = 10/28 (35%), Positives = 15/28 (52%)
Frame = +1 / -3
Query: 61 LEKEQIPRIQPVNILSTFPPRWSPCHSH 144
LE ++ R + + +FPP W CH H
Sbjct: 153311 LEADEGERARALR*RQSFPPPWLGCHDH 153228
Score = 28.1 bits (55), Expect = 4.3
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = -2 / -3
Query: 331 PRWSSYKEDLKRRWISLEKTCDC 263
P W YK+ RW L K+C C
Sbjct: 185477 PVW*RYKQMKSHRWSILPKSCVC 185409
Score = 27.6 bits (54), Expect = 5.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1 / -1
Query: 25 LLSASKVIKQVRLEKEQIPRIQPVNILSTFPPRWSPCHSHLAFYPLSAK 171
L SA K ++ L + IP + N+L+T PP + PLS +
Sbjct: 48253 LASAYKRVQPAHL*HDDIPGVSWRNVLNTLPPNHNRSILRTLTSPLSPR 48107
>NCR_G_C2.570 Ncr_G_C2.570
Length = 65061
Score = 26.7 bits (52), Expect(2) = 2.7
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = -3 / +2
Query: 171 LRRQRVKRQMRVTRTPSW 118
L R RVKR++ R+PSW
Sbjct: 41474 LGRSRVKRRVGQVRSPSW 41527
Score = 19.8 bits (37), Expect(2) = 2.7
Identities = 5/15 (33%), Positives = 9/15 (59%)
Frame = -3 / +3
Query: 96 DGLDAGNLFLFKPYL 52
DG++ G+ F +L
Sbjct: 41610 DGMEGGSTFTIDGFL 41654
>NCR_G_C2.208 Ncr_G_C2.208
Length = 202230
Score = 28.6 bits (56), Expect = 3.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -3
Query: 122 LGGNVDRILTGWMRGICSFS 63
L G V L GW+RG+ SFS
Sbjct: 42037 LMGRVSGTLCGWVRGVISFS 41978
>NCR_G_C2.503 Ncr_G_C2.503
Length = 39824
Score = 28.6 bits (56), Expect = 3.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3 / +1
Query: 177 KTCRVVRRKLKLFRHYSRELRRVQKRVGRQSQ 272
K+C++ R+ +K F+H S + Q R G Q++
Sbjct: 2848 KSCQITRQDIKHFKHASFQTLS*QGREGEQAR 2943
>NCR_G_C2.404 Ncr_G_C2.404
Length = 264766
Score = 28.6 bits (56), Expect = 3.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 271 CDCRPTRFCTRRS 233
CDC P R+C RRS
Sbjct: 158126 CDCCPERYCYRRS 158088
Score = 28.6 bits (56), Expect = 3.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2 / -3
Query: 292 WISLEKTCDCRPTRFCTRRSSRE*WRKSL 206
WI L++ C P R SR+ WRK L
Sbjct: 183851 WIRLQRWCISAPR*CHKRNRSRDAWRKEL 183765
>NCR_G_C2.448 Ncr_G_C2.448
Length = 102021
Score = 28.6 bits (56), Expect = 3.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 349 SFSITSPRWSSYKEDLKRRWISLEKTCDC 263
SF + W S+ +D +R +S+ +TC C
Sbjct: 69922 SFHVPCFVWDSHIQDSRRALMSINRTCYC 69836
>NCR_G_C2.423 Ncr_G_C2.423
Length = 97362
Score = 28.6 bits (56), Expect = 3.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2 / -1
Query: 74 RFPASSPSIFYPHSHQDGVLVTRIWRFTRCRR 169
RFP SSP + P H + R R R RR
Sbjct: 2961 RFPLSSPGLVSPGRHSQSTICQRRQRRRRRRR 2866
>NCR_G_C2.271 Ncr_G_C2.271
Length = 96618
Score = 28.6 bits (56), Expect = 3.1
Identities = 11/19 (57%), Positives = 14/19 (72%)
Frame = +3 / +2
Query: 216 RHYSRELRRVQKRVGRQSQ 272
RH+SR R Q+R GRQS+
Sbjct: 78344 RHHSRRARLTQRRHGRQSR 78400
>NCR_G_C2.714 Ncr_G_C2.714
Length = 49289
Score = 28.6 bits (56), Expect = 3.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1 / -3
Query: 196 VESSNSFAIIPESYGEYKNESVDNRKSFPTKSIF 297
++S F I + Y YKNE + +R SFP S F
Sbjct: 20262 LQSWRHFCIYLDIYRCYKNEQLLSRWSFPLPSSF 20161
>NCR_G_C2.086 Ncr_G_C2.086
Length = 127572
Score = 24.0 bits (46), Expect(2) = 3.4
Identities = 6/16 (37%), Positives = 7/16 (43%)
Frame = -3 / -3
Query: 159 RVKRQMRVTRTPSWWE 112
R+ R PSWW
Sbjct: 36499 RLTRSRSSLSAPSWWH 36452
Score = 22.1 bits (42), Expect(2) = 3.4
Identities = 6/18 (33%), Positives = 11/18 (60%)
Frame = -2 / -2
Query: 319 SYKEDLKRRWISLEKTCD 266
S KED + R+ ++ + D
Sbjct: 36668 SLKEDFRNRFRNISRLMD 36615
>NCR_G_C2.190 Ncr_G_C2.190
Length = 20582
Score = 24.9 bits (48), Expect(2) = 4.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / +2
Query: 247 CTRRSSRE*WRKSLSFLR 194
CTR++SRE W + + LR
Sbjct: 17438 CTRQTSRENWLEKAATLR 17491
Score = 21.2 bits (40), Expect(2) = 4.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 372 SSI*DDLGPLASP 334
+S+*DD GP A P
Sbjct: 17399 TSL*DDFGPSALP 17437
>NCR_G_C2.663 Ncr_G_C2.663
Length = 35951
Score = 28.1 bits (55), Expect = 4.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1 / -1
Query: 55 VRLEKEQIPRIQPVNILSTFPPRWSP 132
VRL + PR++P NI T PP P
Sbjct: 6530 VRLPR*NHPRVRPFNITVTVPPSILP 6453
>NCR_G_C2.101 Ncr_G_C2.101
Length = 209184
Score = 28.1 bits (55), Expect = 4.3
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -3 / -1
Query: 396 SSHPQDIGSSI*DDLGPLASPPRGGHLTKKISR 298
SS P + SSI PP GG LTKK R
Sbjct: 102069 SSSPNNSSSSIDQPTYTAHPPPPGGKLTKKRER 101971
>NCR_G_C2.215 Ncr_G_C2.215
Length = 79770
Score = 28.1 bits (55), Expect = 4.3
Identities = 15/45 (33%), Positives = 19/45 (41%)
Frame = -3 / +2
Query: 300 REDGFRWKRLAIVDRLVFVLAVALGNNGERV*AFYELLCRFSLLR 166
R DG W+ I RL+F + + F L C F LLR
Sbjct: 3539 RGDGGNWRLAKIGQRLLFFHNTTMSKRTPSISNFPPLRCLFYLLR 3673
Score = 27.6 bits (54), Expect = 5.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2 / +3
Query: 107 PHSHQDGVLVTRIWRFTRCRRSSENLQSSS*KAQTLS 217
P SH +L R W T C SS ++ S +T S
Sbjct: 63435 PTSHGTSLLFQRTWAVTACSSSSSSVCDSISSTKTRS 63545
>NCR_G_C2.245 Ncr_G_C2.245
Length = 12520
Score = 28.1 bits (55), Expect = 4.3
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = -3 / +1
Query: 327 GGHLTKKISREDGFRWKRL 271
GGH T + R+DG W R+
Sbjct: 5305 GGHYTVDVRRQDGREWVRI 5361
>NCR_G_C2.168 Ncr_G_C2.168
Length = 28005
Score = 28.1 bits (55), Expect = 4.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2 / +1
Query: 8 HHAQFSSFQPQKSSNK*GLKRNRFPASSPSIFYPH 112
HH +S +P LK N P SPS +PH
Sbjct: 13573 HHGIKASQEPMPYQRLTPLKANAIPHPSPSPHHPH 13677
>NCR_G_C2.489 Ncr_G_C2.489
Length = 72191
Score = 27.6 bits (54), Expect = 5.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2 / -3
Query: 80 PASSPSIFYPHSHQDGVLVTRIWRFTRCRRSSENLQSSS*KAQTLSPLFP 229
P+ + Y +DG V R R + R S +SS*+++ PL P
Sbjct: 67509 PSKTLPTVYRIGEEDGARVYRQQRILQSRSISYQQSTSS*RSKLARPLLP 67360
Score = 23.1 bits (44), Expect(2) = 4.8
Identities = 6/14 (42%), Positives = 9/14 (63%)
Frame = -3 / +2
Query: 120 WWECG*NIDGLDAG 79
WW C ++ G+D G
Sbjct: 22001 WWWCRGSLGGMDGG 22042
Score = 22.6 bits (43), Expect(2) = 4.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3 / +1
Query: 291 GFRWKRLAIVDRLVFVLAVAL 229
GF W+ +RL+FVL V +
Sbjct: 21940 GFFWRVFGGRERLLFVLIVTM 22002
>NCR_G_C2.088 Ncr_G_C2.088
Length = 45573
Score = 27.6 bits (54), Expect(2) = 5.0
Identities = 11/19 (57%), Positives = 13/19 (67%)
Frame = -2 / +3
Query: 328 RWSSYKEDLKRRWISLEKT 272
R S+ D KRRWISL +T
Sbjct: 28386 RVKSWSADTKRRWISLGET 28442
Score = 18.0 bits (33), Expect(2) = 5.0
Identities = 4/9 (44%), Positives = 6/9 (66%)
Frame = -2 / +3
Query: 274 TCDCRPTRF 248
+C CR +R
Sbjct: 28467 SCRCRWSRM 28493
>NCR_G_C2.458 Ncr_G_C2.458
Length = 32375
Score = 27.6 bits (54), Expect = 5.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 298 RRWISLEKTCDCRPTRFCTRR 236
+RW S+ T CR R+C R+
Sbjct: 21032 QRWQSVTDTSACRRNRYCARQ 21094
Score = 27.2 bits (53), Expect = 8.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 74 RFPASSPSIFYPHSHQDGV 130
RFPA+SP+ +PH Q +
Sbjct: 22443 RFPATSPASTHPHRFQTSI 22387
>NCR_G_C2.217 Ncr_G_C2.217
Length = 51556
Score = 27.6 bits (54), Expect = 5.9
Identities = 11/32 (34%), Positives = 18/32 (55%)
Frame = +1 / +1
Query: 121 RWSPCHSHLAFYPLSAKQ*KPAE*FVESSNSF 216
RW+P S + F P+S PA +E+ +S+
Sbjct: 31393 RWTPISSSVTFTPISTYHPSPATSVLEACHSW 31488
>NCR_G_C2.673 Ncr_G_C2.673
Length = 11645
Score = 27.6 bits (54), Expect = 5.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3 / +3
Query: 186 CRFSLLRRQRVKRQMRVTRTPSWWEC 109
CRFS L+ + V + R TR SW C
Sbjct: 2718 CRFSRLQHRNVGVKKRHTRRTSWNLC 2795
>NCR_G_C2.043 Ncr_G_C2.043
Length = 199771
Score = 27.6 bits (54), Expect = 5.9
Identities = 15/52 (28%), Positives = 23/52 (43%)
Frame = +1 / +2
Query: 4 TASCAVQLLSASKVIKQVRLEKEQIPRIQPVNILSTFPPRWSPCHSHLAFYP 159
T S L+ ++ V L Q+P + L T PP++ P S L+ P
Sbjct: 84725 TFSFIFSLIEIPLPLRLVPLVAPQMPAVAVTPTLQTPPPKYRPGSSQLSTVP 84880
>NCR_G_C2.131 Ncr_G_C2.131
Length = 15239
Score = 27.6 bits (54), Expect = 5.9
Identities = 11/23 (47%), Positives = 15/23 (64%)
Frame = -2 / -2
Query: 220 WRKSLSFLRTTLQVFTASPTTGK 152
WRK ++ R+TL+ ASP T K
Sbjct: 3628 WRKLIACERSTLRADEASPATSK 3560
>NCR_G_C2.723 Ncr_G_C2.723
Length = 12969
Score = 27.6 bits (54), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (51%)
Frame = -1 / +1
Query: 398 SHPILKILARPFRMILVL*HHLPEVVILQRRSQEKMDFVGKD 273
+HPIL + P IL HLP V L R+++ + + KD
Sbjct: 3535 NHPILGV*QAPIPTILGRLSHLPSVSNLHRQNRSLLAQLLKD 3660
>NCR_G_C2.802 Ncr_G_C2.802
Length = 37743
Score = 27.6 bits (54), Expect = 5.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 262 RPTRFCTRRSSRE*WR 215
RPTR C R RE*WR
Sbjct: 10953 RPTRHCPGR*RRE*WR 10906
>NCR_G_C2.452 Ncr_G_C2.452
Length = 120796
Score = 27.6 bits (54), Expect = 5.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3 / -1
Query: 180 FSLLRRQRVKRQMRVTRTPSW 118
F +R + V+R R TRT SW
Sbjct: 60862 FISIRIRPVRRAKRRTRTLSW 60800
>NCR_G_C2.803 Ncr_G_C2.803
Length = 35118
Score = 27.6 bits (54), Expect = 5.9
Identities = 13/31 (41%), Positives = 17/31 (53%)
Frame = +1 / -2
Query: 148 AFYPLSAKQ*KPAE*FVESSNSFAIIPESYG 240
AF+PL P+ VES +F +IP S G
Sbjct: 30212 AFFPLEVPSLGPSASSVESGFAFHVIPVSLG 30120
>NCR_G_C2.364 Ncr_G_C2.364
Length = 87437
Score = 27.6 bits (54), Expect = 5.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3 / +1
Query: 6 CIMRSSAPFSLKSHQTSKA*KGTDSPHPARQYSIHIPTKMESLSLAFGVL 155
C+ ++ FSL +H TS++ + + +P ++ SL FGV+
Sbjct: 71653 CLDNTTVAFSLLTHLTSQSVSQSAASYPCDDFAPPSTKLFSFFSLRFGVV 71802
>NCR_G_C2.225 Ncr_G_C2.225
Length = 107875
Score = 27.6 bits (54), Expect = 5.9
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = +2 / +2
Query: 107 PHSHQDGVLVTRIWRFTRCRRS 172
PH H+ G + WR RCR +
Sbjct: 42626 PHPHRPGAPSGKSWRTRRCRNA 42691
>NCR_G_C2.668 Ncr_G_C2.668
Length = 78107
Score = 27.6 bits (54), Expect = 5.9
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2 / +2
Query: 325 WSSYKEDLKRRWISLEKTCDCRPTRFCTRRSSRE*WRKSLSF 200
WSS + + RWISL K R TR S + SL+F
Sbjct: 12521 WSSGLKTARTRWISLGKWAGDRATRTSQSDRSVKDSSSSLNF 12646
>NCR_G_C2.205 Ncr_G_C2.205
Length = 197179
Score = 22.6 bits (43), Expect(3) = 7.2
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = -2 / -1
Query: 343 SITSPRWSSYKEDLKRRWISLEKTCDCRPTR 251
+I P ++ + R+ ++ C C+PT+
Sbjct: 89041 AIVQPTYARPSIFISTRYFAVSFECHCKPTK 88949
Score = 21.7 bits (41), Expect(3) = 7.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / -2
Query: 265 CRPTRFCTRRSSRE*WRKSLS 203
CR R RRSSRE R S++
Sbjct: 88854 CRKGRCQARRSSREDSRVSVN 88792
Score = 18.0 bits (33), Expect(3) = 7.2
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -3 / -3
Query: 183 RFSLLRRQRVKRQMRVTRTP 124
R++ L+ +KRQ TP
Sbjct: 88724 RYAALQVSYIKRQRERRSTP 88665
>NCR_G_C2.327 Ncr_G_C2.327
Length = 167595
Score = 27.2 bits (53), Expect = 8.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 104 RILTGWMRGICSFSSLTCLMTFE 36
++ +GW RG + LT ++FE
Sbjct: 16525 KVASGW*RGFATIDLLTTTLSFE 16457
>NCR_G_C2.800 Ncr_G_C2.800
Length = 21060
Score = 27.2 bits (53), Expect = 8.1
Identities = 7/18 (38%), Positives = 13/18 (71%)
Frame = -3 / +3
Query: 171 LRRQRVKRQMRVTRTPSW 118
++R+R +R ++ RTP W
Sbjct: 2007 IQRRRPRRP*QIPRTPWW 2060
>NCR_G_C2.687 Ncr_G_C2.687
Length = 148317
Score = 27.2 bits (53), Expect = 8.1
Identities = 11/34 (32%), Positives = 16/34 (46%)
Frame = +2 / +1
Query: 83 ASSPSIFYPHSHQDGVLVTRIWRFTRCRRSSENL 184
+S P YPH H G+ + F CRR + +
Sbjct: 106093 SSLPWKNYPHDHFTGI*YHTCFAFQTCRRDAHEI 106194
>NCR_G_C2.509 Ncr_G_C2.509
Length = 86172
Score = 27.2 bits (53), Expect = 8.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3 / +3
Query: 186 CRFSLLRRQRVKRQMRVTRTPSWWECG 106
CR S++ +RV + P+W ECG
Sbjct: 63657 CRLSMIVPKRVLSHNMLPVNPAWPECG 63737
>NCR_G_C2.112 Ncr_G_C2.112
Length = 81259
Score = 27.2 bits (53), Expect = 8.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 230 SGIMAKEFELSTNYSAGFHCFADN 159
S + + +E+ N+S+GF C DN
Sbjct: 59988 SALGLEPWEMKQNFSSGFRCGTDN 60059
>NCR_G_C2.629 Ncr_G_C2.629
Length = 73227
Score = 27.2 bits (53), Expect = 8.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 131 LVTRIWRFTRCRRSSENLQSS 193
L R+WR TR RR+ + +SS
Sbjct: 12762 LTRRLWRTTRLRRALPSSRSS 12700
>NCR_G_C2.151 Ncr_G_C2.151
Length = 130934
Score = 27.2 bits (53), Expect = 8.1
Identities = 13/28 (46%), Positives = 14/28 (49%)
Frame = -3 / +3
Query: 123 SWWECG*NIDGLDAGNLFLFKPYLFDDF 40
SW + G DGLDA N Y F DF
Sbjct: 90795 SWIDQGLRPDGLDANNGLAGTNYFFCDF 90878
>NCR_G_C2.340 Ncr_G_C2.340
Length = 74466
Score = 27.2 bits (53), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (56%)
Frame = -2 / +3
Query: 292 WISLEKTCDCRPTRFCTRRSS 230
W + TC CRP R TR ++
Sbjct: 43056 WRTRNSTCPCRPLRSTTRTTA 43118
>NCR_G_C2.265 Ncr_G_C2.265
Length = 91342
Score = 27.2 bits (53), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (52%)
Frame = +2 / -1
Query: 137 TRIWRFTRCRRSSENLQSSS*KAQTLSPLFPR 232
TR+WR R RRS+ N +S T + PR
Sbjct: 57049 TRLWRKPRPRRSNTNRTITSITTTTTTTTTPR 56954
>NCR_G_C2.106 Ncr_G_C2.106
Length = 177512
Score = 27.2 bits (53), Expect = 8.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 146 WRFTRCRRSSENLQ 187
WR TRCRR++ LQ
Sbjct: 30103 WRSTRCRRTATELQ 30062
>NCR_G_C2.310 Ncr_G_C2.310
Length = 37127
Score = 27.2 bits (53), Expect = 8.1
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -2 / +3
Query: 289 ISLEKTCDCRPTRFCTRRSSRE*WR 215
++ + CDCR FC ++++ + W+
Sbjct: 9648 VAYDVDCDCRFIFFCEKQTATQEWK 9722
>NCR_G_C2.230 Ncr_G_C2.230
Length = 223934
Score = 27.2 bits (53), Expect = 8.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -3
Query: 271 CDCRPTRFCTRRSSRE*WR 215
C CR +R+ RR E WR
Sbjct: 16914 CGCRNSRYLRRRRCEEVWR 16858
>NCR_G_C2.095 Ncr_G_C2.095
Length = 82161
Score = 27.2 bits (53), Expect = 8.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1 / -3
Query: 64 EKEQIPRIQPVNILSTFPPRWSPCHSHLAFYPLSA 168
++++ P+I+ V ++ + P S H+H +PLSA
Sbjct: 5218 KRKKKPKIENVQVIISLYPT*SMPHAHQV*HPLSA 5114
>NCR_G_C2.054 Ncr_G_C2.054
Length = 33329
Score = 27.2 bits (53), Expect = 8.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3 / +2
Query: 144 MRVTRTPSWWECG*NIDGLDAGNLFLF 64
M + T SWW CG +G G +F F
Sbjct: 12689 MVIHPTDSWWVCGPVREG*GKGEIFEF 12769
>NCR_G_C2.007 Ncr_G_C2.007
Length = 114811
Score = 27.2 bits (53), Expect = 8.1
Identities = 12/32 (37%), Positives = 16/32 (49%)
Frame = -2 / -3
Query: 349 SFSITSPRWSSYKEDLKRRWISLEKTCDCRPT 254
S+ I S RW+ DL + +SL C PT
Sbjct: 37094 SWPILSKRWTRAYFDLNKSSVSLVSLVPCSPT 36999
>NCR_G_C2.296 Ncr_G_C2.296
Length = 137551
Score = 27.2 bits (53), Expect = 8.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2 / -3
Query: 68 RNRFPASSPSIFYPHSHQDGVLVTRIW 148
R RFP ++P F+P HQ L W
Sbjct: 123935 RRRFPPAAP*RFHPERHQRTSLRKLTW 123855
>NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G_C2.022
from base 400001
Length = 110000
Score = 27.2 bits (53), Expect = 8.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2 / -1
Query: 298 RRWISLEKTCDCRPTRFCT 242
R+W S CRP+ FCT
Sbjct: 72038 RKWPSSMACAPCRPSSFCT 71982
>NCR_G_C2.349 Ncr_G_C2.349
Length = 77580
Score = 27.2 bits (53), Expect = 8.1
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = +3 / -3
Query: 351 QDHPKWTSQYLEDGM 395
Q+ PKW S LEDGM
Sbjct: 50842 QEMPKWVSFKLEDGM 50798
>NCR_G_C2.308 Ncr_G_C2.308
Length = 22688
Score = 27.2 bits (53), Expect = 8.1
Identities = 13/42 (30%), Positives = 20/42 (46%)
Frame = -2 / +1
Query: 265 CRPTRFCTRRSSRE*WRKSLSFLRTTLQVFTASPTTGKTPNA 140
C P+ FC +++S W SLS ++ S TP+A
Sbjct: 19798 CPPSMFCAQKASSRTW*ASLSMSSPMPKLSKISTVRVWTPSA 19923
>NCR_G_C2.630 Ncr_G_C2.630
Length = 57359
Score = 27.2 bits (53), Expect = 8.1
Identities = 11/32 (34%), Positives = 16/32 (49%)
Frame = +2 / +1
Query: 128 VLVTRIWRFTRCRRSSENLQSSS*KAQTLSPL 223
VLV R W + RC RS + S + + P+
Sbjct: 16363 VLVNRHWVWRRCERSRASASKSRRNCEEIGPV 16458
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 38317659
Number of Sequences: 995
Number of extensions: 570682
Number of successful extensions: 34698
Number of sequences better than 10.0: 68
length of query: 132
length of database: 12,656,439
effective HSP length: 44
effective length of query: 88
effective length of database: 12,612,659
effective search space: 1109913992
effective search space used: 1109913992
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)