TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1610_E04_I0
8ZT.seq
(421 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.404 Ncr_G_C2.404 35 0.040
NCR_G_C2.453 Ncr_G_C2.453 33 0.14
NCR_G_C2.769 Ncr_G_C2.769 32 0.27
NCR_G_C2.568 Ncr_G_C2.568 28 0.46
NCR_G_C2.259 Ncr_G_C2.259 31 0.50
NCR_G_C2.248 Ncr_G_C2.248 31 0.50
NCR_G_C2.214 Ncr_G_C2.214 31 0.50
NCR_G_C2.092 Ncr_G_C2.092 31 0.69
NCR_G_C2.059 Ncr_G_C2.059 31 0.69
NCR_G_C2.690 Ncr_G_C2.690 30 0.95
NCR_G_C2.007 Ncr_G_C2.007 30 0.95
NCR_G_C2.926 Ncr_G_C2.926 30 0.95
NCR_G_C2.495 Ncr_G_C2.495 27 1.1
NCR_G_C2.043 Ncr_G_C2.043 29 1.1
NCR_G_C2.760 Ncr_G_C2.760 30 1.3
NCR_G_C2.664 Ncr_G_C2.664 30 1.3
NCR_G_C2.359 Ncr_G_C2.359 30 1.3
NCR_G_C2.194 Ncr_G_C2.194 30 1.3
NCR_G_C2.075 Ncr_G_C2.075 30 1.3
NCR_G_C2.051 Ncr_G_C2.051 30 1.3
NCR_G_C2.235 Ncr_G_C2.235 25 1.7
NCR_G_C2.598 Ncr_G_C2.598 29 1.8
NCR_G_C2.045 Ncr_G_C2.045 29 1.8
NCR_G_C2.143 Ncr_G_C2.143 29 1.8
NCR_G_C2.208 Ncr_G_C2.208 29 2.5
NCR_G_C2.004 Ncr_G_C2.004 29 2.5
NCR_G_C2.706 Ncr_G_C2.706 29 2.5
NCR_G_C2.017 Ncr_G_C2.017 29 2.5
NCR_G_C2.677 Ncr_G_C2.677 24 2.9
NCR_G_C2.175 Ncr_G_C2.175 29 3.4
NCR_G_C2.122 Ncr_G_C2.122 29 3.4
NCR_G_C2.356 Ncr_G_C2.356 29 3.4
NCR_G_C2.010 Ncr_G_C2.010 29 3.4
NCR_G_C2.446 Ncr_G_C2.446 29 3.4
NCR_G_C2.577 Ncr_G_C2.577 29 3.4
NCR_G_C2.299 Ncr_G_C2.299 29 3.4
NCR_G_C2.691 Ncr_G_C2.691 29 3.4
NCR_G_C2.507 Ncr_G_C2.507 29 3.4
NCR_G_C2.138 Ncr_G_C2.138 29 3.4
NCR_G_C2.727 Ncr_G_C2.727 29 3.4
NCR_G_C2.298 Ncr_G_C2.298 29 3.4
NCR_G_C2.537 Ncr_G_C2.537 25 4.1
NCR_G_C2.033 Ncr_G_C2.033 28 4.6
NCR_G_C2.103 Ncr_G_C2.103 28 4.6
NCR_G_C2.021 Ncr_G_C2.021 28 4.6
NCR_G_C2.203 Ncr_G_C2.203 28 4.6
NCR_G_C2.437 Ncr_G_C2.437 28 4.6
NCR_G_C2.580 Ncr_G_C2.580 28 4.6
NCR_G_C2.125 Ncr_G_C2.125 28 4.6
NCR_G_C2.150 Ncr_G_C2.150 28 4.6
NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of Ncr_G... 28 4.6
NCR_G_C2.588 Ncr_G_C2.588 27 4.7
NCR_G_C2.022_1 Ncr_G_C2.022_1.seq Continuation (1 of 6) of Ncr_G... 24 4.9
NCR_G_C2.687 Ncr_G_C2.687 23 6.2
NCR_G_C2.082 Ncr_G_C2.082 28 6.4
NCR_G_C2.309 Ncr_G_C2.309 28 6.4
NCR_G_C2.076 Ncr_G_C2.076 28 6.4
NCR_G_C2.070 Ncr_G_C2.070 28 6.4
NCR_G_C2.615 Ncr_G_C2.615 28 6.4
NCR_G_C2.445 Ncr_G_C2.445 28 6.4
NCR_G_C2.230 Ncr_G_C2.230 28 6.4
NCR_G_C2.098 Ncr_G_C2.098 28 6.4
NCR_G_C2.448 Ncr_G_C2.448 28 6.4
NCR_G_C2.236 Ncr_G_C2.236 27 7.2
NCR_G_C2.237 Ncr_G_C2.237 27 8.8
NCR_G_C2.483 Ncr_G_C2.483 27 8.8
NCR_G_C2.219 Ncr_G_C2.219 27 8.8
NCR_G_C2.848 Ncr_G_C2.848 27 8.8
NCR_G_C2.416 Ncr_G_C2.416 27 8.8
NCR_G_C2.452 Ncr_G_C2.452 27 8.8
NCR_G_C2.884 Ncr_G_C2.884 27 8.8
NCR_G_C2.591 Ncr_G_C2.591 27 8.8
NCR_G_C2.220 Ncr_G_C2.220 27 8.8
NCR_G_C2.488 Ncr_G_C2.488 27 8.8
>NCR_G_C2.404 Ncr_G_C2.404
Length = 264766
Score = 35.0 bits (70), Expect = 0.040
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 163 TPCLPAICLMPCANISSSGPTAQRYTHGRL 252
T P++ L+P A+ +SSGP+++R TH +L
Sbjct: 15106 TSTKPSMLLIPPASFASSGPSSRRITHSQL 15195
Score = 29.0 bits (57), Expect = 2.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3 / -1
Query: 135 TSFESNSVSHSLPPCHMSDAMC 200
TSFES+ SHS+PP +C
Sbjct: 62680 TSFESSPPSHSIPPYGFKKFVC 62615
Score = 27.6 bits (54), Expect = 6.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1 / +2
Query: 244 HECTVERWGRWMKC*HMASDIWQGG 170
H+C WGRW + H S GG
Sbjct: 63017 HKCRQRWWGRWTRVAHDESGREHGG 63091
>NCR_G_C2.453 Ncr_G_C2.453
Length = 52404
Score = 33.1 bits (66), Expect = 0.14
Identities = 15/41 (36%), Positives = 23/41 (55%)
Frame = +1 / +2
Query: 262 STDRIDMLLVSDLSVFHGEMWQSTVTLPRGSKTGFTRLSTA 384
+ + +D L S+LS +M + TLPR + T RLS+A
Sbjct: 39782 AVEEVDATLQSELSRISEDMTRINATLPRSASTEIRRLSSA 39904
>NCR_G_C2.769 Ncr_G_C2.769
Length = 41985
Score = 32.2 bits (64), Expect = 0.27
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1 / +3
Query: 22 CSL*GLSPALGHLPPSLVAKPYRIHRR 102
CS+ +SP G LPPS +A P H+R
Sbjct: 33342 CSVVTVSPVSGGLPPSYIAYPVSDHQR 33422
>NCR_G_C2.568 Ncr_G_C2.568
Length = 267169
Score = 28.1 bits (55), Expect(2) = 0.46
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1 / -2
Query: 34 GLSPALGHLPPSLVAKPYRIHR 99
GL+P GHLPP + P ++R
Sbjct: 248265 GLAPVEGHLPPEQLPLPCLLYR 248200
Score = 21.2 bits (40), Expect(2) = 0.46
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / -1
Query: 187 LMPCANISSSGPTAQRYT 240
L C N GPTA R++
Sbjct: 248194 LTRCMNFPPIGPTAGRFS 248141
>NCR_G_C2.259 Ncr_G_C2.259
Length = 185660
Score = 31.3 bits (62), Expect = 0.50
Identities = 12/27 (44%), Positives = 16/27 (58%)
Frame = +1 / +1
Query: 100 RQLWSRAYWPEKLHSNPIRLVTPCLPA 180
R L R P++L NPI+ + PC PA
Sbjct: 11260 RSLQRRLQ*PQRLKPNPIQFLAPCRPA 11340
Score = 27.2 bits (53), Expect = 8.8
Identities = 11/31 (35%), Positives = 15/31 (47%)
Frame = -3 / +1
Query: 101 RRWIRYGFATSDGGK*PKAGDSPHKEHHRLS 9
R+W F GK + SPH+ HRL+
Sbjct: 109114 RKWKEVAFVNWGNGKLSPSFQSPHQMPHRLN 109206
>NCR_G_C2.248 Ncr_G_C2.248
Length = 42139
Score = 31.3 bits (62), Expect = 0.50
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2 / +2
Query: 267 CTHVVQAPMSVPLSGGAAG*NVSTWHQTYGREAR 166
CTH V+A S PLSG A G + + GR+ R
Sbjct: 3359 CTHGVRATSSYPLSGAAPGGSGGSGGFNDGRDGR 3460
>NCR_G_C2.214 Ncr_G_C2.214
Length = 116813
Score = 31.3 bits (62), Expect = 0.50
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1 / +1
Query: 121 YWPEKLHSNPIRLVTPCLPAICLMPCANISSSGPTAQR 234
++P + + L CLPA+ +PC + SS+ TA+R
Sbjct: 35566 FFPPSTAALTMFLAVGCLPALASVPCTHGSSARGTAKR 35679
Score = 27.2 bits (53), Expect = 8.8
Identities = 14/41 (34%), Positives = 23/41 (55%)
Frame = -1 / -3
Query: 151 LDSNEVSQANRHATKVVGDGFDTVLRQVMVANDPRLGTVLI 29
L ++ VS+ NR+ T VVG D+V ++ + PR L+
Sbjct: 66579 LTNDPVSRYNRYRTHVVGSVADSVPLVLLQHSHPRYACGLV 66457
>NCR_G_C2.092 Ncr_G_C2.092
Length = 27688
Score = 30.8 bits (61), Expect = 0.69
Identities = 13/31 (41%), Positives = 19/31 (60%)
Frame = +1 / -3
Query: 313 GEMWQSTVTLPRGSKTGFTRLSTAPITTLAI 405
GE+W+S V +K FTRLS+ P + +I
Sbjct: 6413 GEVWRSPVPKKTPAKRSFTRLSSKPSMSSSI 6321
>NCR_G_C2.059 Ncr_G_C2.059
Length = 89435
Score = 30.8 bits (61), Expect = 0.69
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = -1 / +2
Query: 256 RASAHECTVERWGRWMK 206
R SAH+C RW RW +
Sbjct: 6197 RQSAHQCACRRWRRWWR 6247
>NCR_G_C2.690 Ncr_G_C2.690
Length = 112273
Score = 30.4 bits (60), Expect = 0.95
Identities = 13/28 (46%), Positives = 16/28 (56%)
Frame = +1 / +3
Query: 37 LSPALGHLPPSLVAKPYRIHRRQLWSRA 120
L+P LGH S+ A PY R L SR+
Sbjct: 106335 LTPQLGHRQSSMAAYPYSFSRLPLLSRS 106418
>NCR_G_C2.007 Ncr_G_C2.007
Length = 114811
Score = 30.4 bits (60), Expect = 0.95
Identities = 11/19 (57%), Positives = 13/19 (67%)
Frame = +3 / -2
Query: 132 ETSFESNSVSHSLPPCHMS 188
ETS + +S SLPPCH S
Sbjct: 57375 ETSTTTTQISSSLPPCHAS 57319
>NCR_G_C2.926 Ncr_G_C2.926
Length = 12290
Score = 30.4 bits (60), Expect = 0.95
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3 / +1
Query: 114 ACLLA*ETSFESNSVSHSLPPCHMSDAM 197
A LL ET + SHS P CHM+D M
Sbjct: 7342 AFLLLSETIYLHTYPSHSHPVCHMADVM 7425
>NCR_G_C2.495 Ncr_G_C2.495
Length = 14943
Score = 26.7 bits (52), Expect(2) = 1.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / -2
Query: 43 PALGHLPPSLVAKPYRIHRR 102
P + HLPP +A+ R+H R
Sbjct: 875 PQIHHLPPDKLARLLRLHMR 816
Score = 21.7 bits (41), Expect(2) = 1.1
Identities = 11/27 (40%), Positives = 13/27 (47%)
Frame = +1 / -3
Query: 175 PAICLMPCANISSSGPTAQRYTHGRLH 255
PA C CA+ + TAQ T LH
Sbjct: 841 PACCASTCASKNGWTFTAQ*STSSLLH 761
>NCR_G_C2.043 Ncr_G_C2.043
Length = 199771
Score = 29.5 bits (58), Expect(2) = 1.1
Identities = 12/32 (37%), Positives = 16/32 (49%)
Frame = -2 / +1
Query: 261 HVVQAPMSVPLSGGAAG*NVSTWHQTYGREAR 166
H +Q MS+ S A V WH+ YGR +
Sbjct: 63943 HTLQGKMSIEGSMTHASPEVHCWHERYGRRGQ 64038
Score = 27.2 bits (53), Expect = 8.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1 / -1
Query: 115 ATKVVGDGFDTVLRQVMVANDPR 47
+ ++VG+G D V ++V VA PR
Sbjct: 157522 SVRIVGNGADAVRQRVEVAE*PR 157454
Score = 18.5 bits (34), Expect(2) = 1.1
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = -2 / +2
Query: 411 KAYGQGSNRR 382
K YG ++RR
Sbjct: 63905 KVYGAAADRR 63934
>NCR_G_C2.760 Ncr_G_C2.760
Length = 27637
Score = 29.9 bits (59), Expect = 1.3
Identities = 11/31 (35%), Positives = 14/31 (44%)
Frame = +1 / +1
Query: 166 PCLPAICLMPCANISSSGPTAQRYTHGRLHD 258
PC P C + S P +R+ GR HD
Sbjct: 10774 PCWPRRCCSSAVSSCGS*PWTRRWLRGRHHD 10866
>NCR_G_C2.664 Ncr_G_C2.664
Length = 54200
Score = 29.9 bits (59), Expect = 1.3
Identities = 12/28 (42%), Positives = 15/28 (52%)
Frame = +1 / +2
Query: 154 RLVTPCLPAICLMPCANISSSGPTAQRY 237
RLV CLP +C AN+ P + RY
Sbjct: 39353 RLVHECLPGLCQPLLANLPRRMPASSRY 39436
>NCR_G_C2.359 Ncr_G_C2.359
Length = 41101
Score = 29.9 bits (59), Expect = 1.3
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = -1 / +2
Query: 382 PWIAS*TQSWSLLVVLP*IATSPRGKLKGQRQAAYQFDLYSRRASAHECTVERWGRWMKC 203
P + S + W+L + P IAT P+ +++G + F + R + C W C
Sbjct: 27653 PALFSAREDWNLRLRDPRIATHPQTRVQGSPHSRRTFSVCPRLPACLLCCFRSDASWRAC 27832
>NCR_G_C2.194 Ncr_G_C2.194
Length = 74501
Score = 29.9 bits (59), Expect = 1.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1 / -2
Query: 55 HLPPSLVAKPYRIHRRQL 108
HLPP L YRIHRR L
Sbjct: 60271 HLPPGLSIDGYRIHRRIL 60218
>NCR_G_C2.075 Ncr_G_C2.075
Length = 33884
Score = 29.9 bits (59), Expect = 1.3
Identities = 10/24 (41%), Positives = 15/24 (61%)
Frame = +1 / -3
Query: 163 TPCLPAICLMPCANISSSGPTAQR 234
T C+ C + CA +S++ PT QR
Sbjct: 20712 TDCVSQRCALSCARLSTNTPTVQR 20641
>NCR_G_C2.051 Ncr_G_C2.051
Length = 40154
Score = 29.9 bits (59), Expect = 1.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3 / +2
Query: 15 SMMFFMRTVPSLGSFATITCRKTVS 89
S + F RT+P+ GSF++I C VS
Sbjct: 20987 STISFPRTLPTAGSFSSIQCSPLVS 21061
>NCR_G_C2.235 Ncr_G_C2.235
Length = 51138
Score = 24.9 bits (48), Expect(2) = 1.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1 / +1
Query: 160 VTPCLPAICLMPCANISSSGPTAQRYTHGRLHDVST 267
+ P P CLM CA+ SS + ++ + +VS+
Sbjct: 28072 IGPSCPLSCLMICASSKSSSRSIFNPSNTEVSEVSS 28179
Score = 22.6 bits (43), Expect(2) = 1.7
Identities = 7/16 (43%), Positives = 10/16 (61%)
Frame = +3 / +3
Query: 324 AIYGNTTKRLQDWVHE 371
A YGN R + W+H+
Sbjct: 28263 AYYGNEASRER*WIHK 28310
>NCR_G_C2.598 Ncr_G_C2.598
Length = 13599
Score = 29.5 bits (58), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (54%)
Frame = +2 / +2
Query: 41 PQPWVICHHHLSQNRIESIADNFGRVP 121
PQP V+C H LS I+ + R+P
Sbjct: 3584 PQPSVVCLHTLSLTSIDQLNPGLARLP 3664
>NCR_G_C2.045 Ncr_G_C2.045
Length = 107702
Score = 29.5 bits (58), Expect = 1.8
Identities = 10/18 (55%), Positives = 15/18 (82%)
Frame = -3 / -1
Query: 359 VLEPLGSVTVDCHISPWK 306
VL+P+ ++TVDC I P+K
Sbjct: 84185 VLQPIHTLTVDCCIGPYK 84132
>NCR_G_C2.143 Ncr_G_C2.143
Length = 29476
Score = 29.5 bits (58), Expect = 1.8
Identities = 12/29 (41%), Positives = 18/29 (61%)
Frame = +1 / -1
Query: 310 HGEMWQSTVTLPRGSKTGFTRLSTAPITT 396
+G W S T PRG+ G T ++TA I++
Sbjct: 577 NGTSWVSAETPPRGNPGGVTTITTALISS 491
>NCR_G_C2.208 Ncr_G_C2.208
Length = 202230
Score = 29.0 bits (57), Expect = 2.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1 / +1
Query: 166 PCLPAICLMPCANISSSGPTAQRYTHGR 249
P L A C+ CANI GP T+GR
Sbjct: 109744 PVLGAKCVGRCANIPDPGPLICPNTYGR 109827
>NCR_G_C2.004 Ncr_G_C2.004
Length = 14410
Score = 29.0 bits (57), Expect = 2.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3 / +2
Query: 48 LGSFATITCRKTVSNPSPTTLVACLL 125
LG F T+TC +P+ + L+ LL
Sbjct: 13814 LGEFGTVTCGNRAIHPASSALMQSLL 13891
>NCR_G_C2.706 Ncr_G_C2.706
Length = 27623
Score = 29.0 bits (57), Expect = 2.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3 / +2
Query: 135 TSFESNSVSHSLPPCHMSDAMC*HFIQRPHRSTVHSWAL 251
TS + S S SLP +S AMC RP R+ + W L
Sbjct: 1763 TSPTTRSPSQSLPSSTLSAAMCPRP*SRPKRAMLWIWWL 1879
>NCR_G_C2.017 Ncr_G_C2.017
Length = 86020
Score = 29.0 bits (57), Expect = 2.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 72 K*WWQMTQGWGQSS*RTS 19
K WW+M GWG+ + TS
Sbjct: 31834 KNWWKMPSGWGRGAPSTS 31781
Score = 27.2 bits (53), Expect = 8.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 402 GQGSNRRRG*PREPSLGASW*CYR 331
G+G R + PR+P LGAS * +R
Sbjct: 12141 GKGPGRVKFYPRKPGLGASM*WFR 12212
>NCR_G_C2.677 Ncr_G_C2.677
Length = 79423
Score = 24.4 bits (47), Expect(2) = 2.9
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +1 / +1
Query: 169 CLPAICLMPCANISSSGPTAQRYT 240
C+P P A S + P RY
Sbjct: 69580 CIPQQPSCPAARSSPASPARSRYV 69651
Score = 22.1 bits (42), Expect(2) = 2.9
Identities = 8/29 (27%), Positives = 14/29 (47%)
Frame = +3 / +1
Query: 36 TVPSLGSFATITCRKTVSNPSPTTLVACL 122
T P + + TC ++P T V+C+
Sbjct: 69499 TQP*IAKRSAATCGSQCASPQATAQVSCI 69585
>NCR_G_C2.175 Ncr_G_C2.175
Length = 57986
Score = 28.6 bits (56), Expect = 3.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3 / +1
Query: 413 IRLMAKVVIGAVDSLVNPVLEPLGSVTVDCHIS 315
IRL A +V+G + S N V +P G+V C S
Sbjct: 54139 IRLSA*LVVGVLCSSENEVRQPAGTVNDPCPTS 54237
>NCR_G_C2.122 Ncr_G_C2.122
Length = 63268
Score = 28.6 bits (56), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 289 QAAYQFDLYSRRASAHECTVERWGR 215
+ YQ L + A+AH+ T ER GR
Sbjct: 18354 KGTYQTSLQTMPATAHQTTTERLGR 18280
>NCR_G_C2.356 Ncr_G_C2.356
Length = 40340
Score = 28.6 bits (56), Expect = 3.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1 / -1
Query: 166 PCLPAICLMPCANISSSGPTAQRYT 240
PCLP+ PC + + PTAQ T
Sbjct: 28022 PCLPSAQSAPCLSTPTPTPTAQDIT 27948
>NCR_G_C2.010 Ncr_G_C2.010
Length = 27287
Score = 28.6 bits (56), Expect = 3.4
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = -1 / -2
Query: 241 ECTVERWGRWMKC*HMASDIWQGGKE*LTELDSNEVSQANRHATKVVGDGFDTVLRQVMV 62
E V W + C H+A D+ +E L E NRH +++G VL +
Sbjct: 12985 EQDVPAWAGNIHCSHLAFDLLCNMEEHLCR*REKEADGKNRHRIEILGTITSFVLLSNIP 12806
Query: 61 ANDPRLGTVLIKNIID 14
+ G L K ++D
Sbjct: 12805 SVRKTFGQRLGKLLVD 12758
>NCR_G_C2.446 Ncr_G_C2.446
Length = 145200
Score = 28.6 bits (56), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (58%)
Frame = +3 / -1
Query: 153 SVSHSLPPCHMSDAMC*HFIQRPHRST 233
+VSH CH+ +C* QRP R++
Sbjct: 37245 NVSHIFHMCHVGHFIC*LLSQRPRRAS 37165
>NCR_G_C2.577 Ncr_G_C2.577
Length = 63063
Score = 28.6 bits (56), Expect = 3.4
Identities = 11/24 (45%), Positives = 13/24 (53%)
Frame = -2 / -1
Query: 408 AYGQGSNRRRG*PREPSLGASW*C 337
A+G G RR G E G +W*C
Sbjct: 42675 AFGDGEERRMGRG*ESGFGVAW*C 42604
>NCR_G_C2.299 Ncr_G_C2.299
Length = 59900
Score = 28.6 bits (56), Expect = 3.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 26 LYEDCPQPWVICHHHLSQNRI 88
+Y+D QPW +C H++ ++
Sbjct: 32140 IYKDPSQPWAVCCEHMACEKL 32202
>NCR_G_C2.691 Ncr_G_C2.691
Length = 50179
Score = 28.6 bits (56), Expect = 3.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1 / -1
Query: 73 VAKPYRIHRRQLWSRAYWPEKLHSNPIRLVTPC 171
+ P +H + A P KLH +P+R+V+ C
Sbjct: 45613 IIAPVAVHCLARFWAAMLPAKLHVSPLRIVSIC 45515
>NCR_G_C2.507 Ncr_G_C2.507
Length = 196904
Score = 28.6 bits (56), Expect = 3.4
Identities = 15/47 (31%), Positives = 22/47 (45%)
Frame = +3 / -2
Query: 30 MRTVPSLGSFATITCRKTVSNPSPTTLVACLLA*ETSFESNSVSHSL 170
+R PS + +T+ + + S TT+ C S S SVS SL
Sbjct: 157660 LRPAPSPSTLSTLCPTRLAVSLSSTTIRPCRSLPTLSSSSGSVSSSL 157520
>NCR_G_C2.138 Ncr_G_C2.138
Length = 46995
Score = 28.6 bits (56), Expect = 3.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2 / -3
Query: 255 VQAPMSVPLSGGAAG*NVSTWHQTYGREARS 163
VQ P+++ LSG A + W QT+G S
Sbjct: 43423 VQQPLNLSLSGLAITVTLQLWRQTFGGSGAS 43331
>NCR_G_C2.727 Ncr_G_C2.727
Length = 67009
Score = 28.6 bits (56), Expect = 3.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3 / -2
Query: 33 RTVPSLGSFATITCRKTVSNPS 98
R PSL ++ T+ CR T+SN S
Sbjct: 2130 RLDPSLCTYVTVLCRVTISNVS 2065
>NCR_G_C2.298 Ncr_G_C2.298
Length = 253576
Score = 28.6 bits (56), Expect = 3.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -3
Query: 65 GGK*PKAGDSPHKEHHRLSCC 3
GG+ K SPHK HH+ S C
Sbjct: 115820 GGQKMKVVFSPHKNHHQASRC 115758
>NCR_G_C2.537 Ncr_G_C2.537
Length = 40376
Score = 25.3 bits (49), Expect(2) = 4.1
Identities = 8/23 (34%), Positives = 12/23 (51%)
Frame = +1 / -1
Query: 127 PEKLHSNPIRLVTPCLPAICLMP 195
P + +P R++ PC P L P
Sbjct: 23972 PAPVPCSPPRVLAPCPPPRVLAP 23904
Score = 20.8 bits (39), Expect(2) = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1 / -3
Query: 70 LVAKPYRIHR 99
L ++ YRIHR
Sbjct: 24036 LCSREYRIHR 24007
>NCR_G_C2.033 Ncr_G_C2.033
Length = 166617
Score = 28.1 bits (55), Expect = 4.6
Identities = 13/30 (43%), Positives = 15/30 (49%)
Frame = +1 / -1
Query: 88 RIHRRQLWSRAYWPEKLHSNPIRLVTPCLP 177
R HRR R Y P + H P+RL LP
Sbjct: 31680 RQHRRNRVDRHYGPSRRHPLPLRLQVR*LP 31591
>NCR_G_C2.103 Ncr_G_C2.103
Length = 50668
Score = 28.1 bits (55), Expect = 4.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2 / -3
Query: 420 SSHKAYGQGSNRRRG*PREPSLGA 349
+SH Y SNR *P EPSL +
Sbjct: 7295 ASHPGYHTTSNRNAR*PEEPSLAS 7224
>NCR_G_C2.021 Ncr_G_C2.021
Length = 86769
Score = 28.1 bits (55), Expect = 4.6
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +1 / +1
Query: 79 KPYRIHRRQLWSRAYWPEKLHSNPIRLVTPCLPAICLMPCANISSS 216
KPY + R R Y P L S P LV+ LPA L + SSS
Sbjct: 14335 KPYIVCTRVEARRGYLPTLLTSLPSCLVSRHLPAHSLSASSASSSS 14472
>NCR_G_C2.203 Ncr_G_C2.203
Length = 128723
Score = 28.1 bits (55), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / -3
Query: 42 PSLGSFATITCRKTVSNPS 98
P LG T C +TVS PS
Sbjct: 62793 PVLGHTETAVCDRTVSGPS 62737
>NCR_G_C2.437 Ncr_G_C2.437
Length = 118197
Score = 28.1 bits (55), Expect = 4.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1 / -1
Query: 325 QSTVTLPRGSKTGFTRLSTAPITTLA 402
+ V+ KTGF RLS PIT +A
Sbjct: 91140 EDRVSDEEAGKTGFRRLSATPITEVA 91063
>NCR_G_C2.580 Ncr_G_C2.580
Length = 63172
Score = 28.1 bits (55), Expect = 4.6
Identities = 17/51 (33%), Positives = 24/51 (46%)
Frame = +2 / +2
Query: 140 IRIQFG*SLLASLPYV*CHVLTFHPAAPPLNGTLMGACTT*VQIELICCLS 292
+++ G L S PY+ T H PL+ TL G T +Q L C +S
Sbjct: 36350 LQVDGGCQGLPSFPYLHTQYCTLHQGILPLHWTLPGHLTHLLQNFLPCPVS 36502
Score = 27.6 bits (54), Expect = 6.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3 / -2
Query: 327 IYGNTTKRLQDWVHEAIHG 383
+ G T+R DW HEA G
Sbjct: 15633 VLGGRTRRGDDWAHEAAQG 15577
>NCR_G_C2.125 Ncr_G_C2.125
Length = 138790
Score = 28.1 bits (55), Expect = 4.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1 / -3
Query: 262 SRRASAHECTVERWGRWMKC 203
SRR + HEC GRW C
Sbjct: 110459 SRRGNWHECRTTMPGRWEPC 110400
>NCR_G_C2.150 Ncr_G_C2.150
Length = 137585
Score = 28.1 bits (55), Expect = 4.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1 / +2
Query: 85 TVLRQVMVANDPRLGTVLIKNIIDCHVV 2
TVL ++MVANDP L L ++D +++
Sbjct: 88235 TVLARLMVANDP*LTIFLDLEVMDTNIL 88318
>NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of Ncr_G_C2.022
from base 300001
Length = 110000
Score = 28.1 bits (55), Expect = 4.6
Identities = 7/13 (53%), Positives = 9/13 (68%)
Frame = +2 / -1
Query: 38 CPQPWVICHHHLS 76
CP W+ C HHL+
Sbjct: 11639 CPSTWLACSHHLT 11601
>NCR_G_C2.588 Ncr_G_C2.588
Length = 154785
Score = 26.7 bits (52), Expect(2) = 4.7
Identities = 14/43 (32%), Positives = 19/43 (43%)
Frame = +1 / +1
Query: 139 HSNPIRLVTPCLPAICLMPCANISSSGPTAQRYTHGRLHDVST 267
H+ +R P PA+C ++S A T GRL V T
Sbjct: 41788 HAQTLRAFCPTQPALCHGSVLIVASPFTPATPNTSGRLRVVGT 41916
Score = 18.9 bits (35), Expect(2) = 4.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 65 HHLSQNRIESI 97
HH+SQN I +
Sbjct: 41634 HHISQNFITMV 41666
>NCR_G_C2.022_1 Ncr_G_C2.022_1.seq Continuation (1 of 6) of
Ncr_G_C2.022 from base 1
Length = 110000
Score = 23.5 bits (45), Expect(2) = 4.9
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = -3 / -2
Query: 104 CRRWIRYGFATSDGG 60
CRRW+R TS G
Sbjct: 7900 CRRWLRAACQTSHDG 7856
Score = 22.1 bits (42), Expect(2) = 4.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3 / -1
Query: 188 RHMAGRQGVTNRIG 147
RHM G+ N IG
Sbjct: 8030 RHMGSFHGLDNMIG 7989
>NCR_G_C2.687 Ncr_G_C2.687
Length = 148317
Score = 23.1 bits (44), Expect(2) = 6.2
Identities = 11/29 (37%), Positives = 15/29 (50%)
Frame = -2 / +1
Query: 318 LPVEN*KVRDKQHINSICTHVVQAPMSVP 232
LPV * R+K + VV P+S+P
Sbjct: 96859 LPVTG*CAREKWERKTYVLKVVSEPLSLP 96945
Score = 22.1 bits (42), Expect(2) = 6.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2 / +3
Query: 258 VVQAPMSVPLSGGAAG*NVSTWHQTYG 178
+V A +P +GG N + W + YG
Sbjct: 96933 LVIAKARLPHAGGR*TENPTIWKRLYG 97013
>NCR_G_C2.082 Ncr_G_C2.082
Length = 85760
Score = 27.6 bits (54), Expect = 6.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1 / -3
Query: 88 RIHRRQLWSRAYWPEKLHSNPIRLVTPCLP 177
R + Q RA WP +L S R +PC P
Sbjct: 36078 RPKKMQTSRRATWPPRLRSRRSRPKSPCSP 35989
>NCR_G_C2.309 Ncr_G_C2.309
Length = 70740
Score = 27.6 bits (54), Expect = 6.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / +1
Query: 199 HMASDIWQGGKE*LTELDSNEVSQANRH 116
H+ +D WQ LT +DSN + N H
Sbjct: 25621 HIWTDGWQASLYLLTSVDSNNKNDRNTH 25704
>NCR_G_C2.076 Ncr_G_C2.076
Length = 241344
Score = 27.6 bits (54), Expect = 6.4
Identities = 14/47 (29%), Positives = 19/47 (39%)
Frame = +3 / -2
Query: 81 TVSNPSPTTLVACLLA*ETSFESNSVSHSLPPCHMSDAMC*HFIQRP 221
TV N P L+ CLL F + H PP + + +Q P
Sbjct: 84692 TVRNSRPRCLLNCLLGIFGIFNHTVMVHHFPPAIILQLLIYELLQTP 84552
>NCR_G_C2.070 Ncr_G_C2.070
Length = 89843
Score = 27.6 bits (54), Expect = 6.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1 / +2
Query: 139 HSNPIRLVTPCLPAICLMPCANISSSGP 222
HSN R++ PA+C C +SS P
Sbjct: 59117 HSNASRILCKDRPALCASQCFPLSSEFP 59200
>NCR_G_C2.615 Ncr_G_C2.615
Length = 130067
Score = 27.6 bits (54), Expect = 6.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 14 VYDVLYEDCPQPWVICHHHLS 76
VYDV+Y C ++CHH L+
Sbjct: 64734 VYDVIYVFCWANSLLCHHLLA 64796
>NCR_G_C2.445 Ncr_G_C2.445
Length = 167464
Score = 27.6 bits (54), Expect = 6.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +1
Query: 127 PEKLHSNPIRLVTPCLPAICLMP 195
PE+ H+ P + PCLP P
Sbjct: 40756 PERKHNEPNGFLEPCLPGAVTFP 40824
>NCR_G_C2.230 Ncr_G_C2.230
Length = 223934
Score = 27.6 bits (54), Expect = 6.4
Identities = 10/24 (41%), Positives = 12/24 (49%)
Frame = +2 / +2
Query: 35 DCPQPWVICHHHLSQNRIESIADN 106
D P P CHHH + S+ DN
Sbjct: 40190 DQPLPVTPCHHHHHHHANGSLVDN 40261
>NCR_G_C2.098 Ncr_G_C2.098
Length = 28828
Score = 27.6 bits (54), Expect = 6.4
Identities = 16/42 (38%), Positives = 21/42 (49%)
Frame = +3 / +1
Query: 42 PSLGSFATITCRKTVSNPSPTTLVACLLA*ETSFESNSVSHS 167
P L FAT T PS TTL++ L A ++ S+ HS
Sbjct: 9658 PLLSPFATALGCITSVRPSCTTLISTLYAFASAVSSSCPPHS 9783
>NCR_G_C2.448 Ncr_G_C2.448
Length = 102021
Score = 27.6 bits (54), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1 / +2
Query: 325 QSTVTLPRGSKTGFTRLSTAPITTLA 402
+S PRGS TGF + ST P +A
Sbjct: 44573 RSVPVSPRGSPTGFRQASTRPRRPIA 44650
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 27.2 bits (53), Expect = 8.8
Identities = 11/31 (35%), Positives = 14/31 (44%)
Frame = +1 / +2
Query: 64 PSLVAKPYRIHRRQLWSRAYWPEKLHSNPIR 156
PS +P R + WS WPE+ S R
Sbjct: 256706 PSCRQRPRNARRDRSWSGGTWPEETSSGGAR 256798
Score = 23.1 bits (44), Expect(2) = 7.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 109 WSRAYWPEKLHSNPI 153
WS Y EK H++P+
Sbjct: 85309 WSGRYRWEKSHTSPL 85353
Score = 21.7 bits (41), Expect(2) = 7.2
Identities = 5/22 (22%), Positives = 13/22 (58%)
Frame = +1 / +1
Query: 58 LPPSLVAKPYRIHRRQLWSRAY 123
LPP+ ++ + +R+ W+ +
Sbjct: 85243 LPPNRLSGAFWALQRRAWNDGH 85308
>NCR_G_C2.237 Ncr_G_C2.237
Length = 91678
Score = 27.2 bits (53), Expect = 8.8
Identities = 12/38 (31%), Positives = 19/38 (49%)
Frame = +2 / +1
Query: 20 DVLYEDCPQPWVICHHHLSQNRIESIADNFGRVPIGLR 133
D+ D P+P CHH + ++ S++ R P G R
Sbjct: 82117 DIADLDEPRPGPTCHHFVDRSTTFSLSTLSPRPPTGSR 82230
>NCR_G_C2.483 Ncr_G_C2.483
Length = 63015
Score = 27.2 bits (53), Expect = 8.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 145 NPIRLVTPCLPAICLMPCANISSS 216
+P RLVTPCL A M +++SS
Sbjct: 5092 SPSRLVTPCLRAHAWMSECHLTSS 5163
>NCR_G_C2.219 Ncr_G_C2.219
Length = 282514
Score = 27.2 bits (53), Expect = 8.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3 / +2
Query: 248 RP*VYR*AVGPLDEMLAHGIRHMAGRQGVTNRI 150
RP V R + G E+ A G+RH A + ++R+
Sbjct: 131501 RPQVRRHSPGHSSELQA*GVRHRARARRYSSRV 131599
>NCR_G_C2.848 Ncr_G_C2.848
Length = 44195
Score = 27.2 bits (53), Expect = 8.8
Identities = 13/31 (41%), Positives = 15/31 (47%)
Frame = +1 / -3
Query: 52 GHLPPSLVAKPYRIHRRQLWSRAYWPEKLHS 144
GHLP SL P R HR Y+P + S
Sbjct: 34134 GHLPASLHRGPDRPHRSSRSLGHYFPHRCRS 34042
>NCR_G_C2.416 Ncr_G_C2.416
Length = 188447
Score = 27.2 bits (53), Expect = 8.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3 / -3
Query: 312 RGDVAIYGNTTKRLQDWVH 368
RGD+ +++RLQ W+H
Sbjct: 17841 RGDILNASKSSRRLQHWIH 17785
>NCR_G_C2.452 Ncr_G_C2.452
Length = 120796
Score = 27.2 bits (53), Expect = 8.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2 / +2
Query: 251 CTT*VQIELICCLSLTFQFSTGRCGNLR*HYQEAPRLGSR 370
C T +L +SL+ + S+ C ++ YQEA R G R
Sbjct: 52121 CQTNKDEKLTSTVSLSLECSSATCHSMFVSYQEAHRKGYR 52240
>NCR_G_C2.884 Ncr_G_C2.884
Length = 9280
Score = 27.2 bits (53), Expect = 8.8
Identities = 9/21 (42%), Positives = 16/21 (75%)
Frame = -3 / -3
Query: 416 PIRLMAKVVIGAVDSLVNPVL 354
P+ L+++ + A+ SLVNP+L
Sbjct: 7643 PVGLISQFIRAAIQSLVNPIL 7581
>NCR_G_C2.591 Ncr_G_C2.591
Length = 35415
Score = 27.2 bits (53), Expect = 8.8
Identities = 13/29 (44%), Positives = 14/29 (47%)
Frame = -3 / -2
Query: 395 VVIGAVDSLVNPVLEPLGSVTVDCHISPW 309
VV+G V LV LGSV H PW
Sbjct: 3800 VVVGVVAELVVKAPNTLGSVFTSQHPVPW 3714
>NCR_G_C2.220 Ncr_G_C2.220
Length = 142147
Score = 27.2 bits (53), Expect = 8.8
Identities = 13/28 (46%), Positives = 16/28 (56%)
Frame = -1 / -2
Query: 316 PRGKLKGQRQAAYQFDLYSRRASAHECT 233
PR L+ AAY D +S R+SAH T
Sbjct: 121338 PR*TLQTPSNAAYWTDSFSTRSSAHRRT 121255
>NCR_G_C2.488 Ncr_G_C2.488
Length = 91443
Score = 27.2 bits (53), Expect = 8.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / -3
Query: 214 SGPTAQRYTHGRLHDVSTDR 273
SGPTA T R HDV+T R
Sbjct: 27655 SGPTASFSTPSRSHDVTTMR 27596
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 45771593
Number of Sequences: 995
Number of extensions: 742029
Number of successful extensions: 44118
Number of sequences better than 10.0: 74
length of query: 140
length of database: 12,656,439
effective HSP length: 44
effective length of query: 95
effective length of database: 12,612,659
effective search space: 1198202605
effective search space used: 1198202605
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 53 (27.2 bits)