TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1610_H03_O0
6ZT.seq
(513 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.265 Ncr_G_C2.265 33 0.25
NCR_G_C2.521 Ncr_G_C2.521 32 0.34
NCR_G_C2.253 Ncr_G_C2.253 31 0.89
NCR_G_C2.236 Ncr_G_C2.236 31 0.89
NCR_G_C2.095 Ncr_G_C2.095 31 0.89
NCR_G_C2.230 Ncr_G_C2.230 31 0.89
NCR_G_C2.298 Ncr_G_C2.298 30 1.2
NCR_G_C2.213 Ncr_G_C2.213 30 1.2
NCR_G_C2.151 Ncr_G_C2.151 30 1.2
NCR_G_C2.622 Ncr_G_C2.622 27 1.5
NCR_G_C2.172 Ncr_G_C2.172 30 1.7
NCR_G_C2.125 Ncr_G_C2.125 30 1.7
NCR_G_C2.771 Ncr_G_C2.771 30 1.7
NCR_G_C2.416 Ncr_G_C2.416 25 1.9
NCR_G_C2.941 Ncr_G_C2.941 29 2.3
NCR_G_C2.629 Ncr_G_C2.629 29 2.3
NCR_G_C2.043 Ncr_G_C2.043 29 2.3
NCR_G_C2.512 Ncr_G_C2.512 29 2.3
NCR_G_C2.070 Ncr_G_C2.070 29 3.2
NCR_G_C2.375 Ncr_G_C2.375 29 3.2
NCR_G_C2.096 Ncr_G_C2.096 29 3.2
NCR_G_C2.701 Ncr_G_C2.701 29 3.2
NCR_G_C2.147 Ncr_G_C2.147 29 3.2
NCR_G_C2.038 Ncr_G_C2.038 29 3.2
NCR_G_C2.570 Ncr_G_C2.570 29 4.4
NCR_G_C2.295 Ncr_G_C2.295 29 4.4
NCR_G_C2.654 Ncr_G_C2.654 29 4.4
NCR_G_C2.042_6 Ncr_G_C2.042_6.seq Continuation (6 of 6) of Ncr_G... 29 4.4
NCR_G_C2.218 Ncr_G_C2.218 29 4.4
NCR_G_C2.086 Ncr_G_C2.086 24 6.0
NCR_G_C2.128 Ncr_G_C2.128 28 6.0
NCR_G_C2.369 Ncr_G_C2.369 28 6.0
NCR_G_C2.273 Ncr_G_C2.273 28 6.0
NCR_G_C2.308 Ncr_G_C2.308 28 6.0
NCR_G_C2.568 Ncr_G_C2.568 28 6.0
NCR_G_C2.690 Ncr_G_C2.690 28 6.0
NCR_G_C2.256 Ncr_G_C2.256 28 6.0
NCR_G_C2.185 Ncr_G_C2.185 28 6.0
NCR_G_C2.497 Ncr_G_C2.497 28 6.0
NCR_G_C2.658 Ncr_G_C2.658 28 6.0
NCR_G_C2.205 Ncr_G_C2.205 28 6.0
NCR_G_C2.042_3 Ncr_G_C2.042_3.seq Continuation (3 of 6) of Ncr_G... 28 6.0
NCR_G_C2.681 Ncr_G_C2.681 28 6.0
NCR_G_C2.202 Ncr_G_C2.202 28 6.0
NCR_G_C2.232 Ncr_G_C2.232 24 6.5
NCR_G_C2.744 Ncr_G_C2.744 27 6.6
NCR_G_C2.111 Ncr_G_C2.111 27 6.9
NCR_G_C2.430 Ncr_G_C2.430 28 8.3
NCR_G_C2.271 Ncr_G_C2.271 28 8.3
NCR_G_C2.488 Ncr_G_C2.488 28 8.3
NCR_G_C2.630 Ncr_G_C2.630 28 8.3
NCR_G_C2.574 Ncr_G_C2.574 28 8.3
NCR_G_C2.407 Ncr_G_C2.407 28 8.3
NCR_G_C2.214 Ncr_G_C2.214 28 8.3
NCR_G_C2.148 Ncr_G_C2.148 28 8.3
NCR_G_C2.596 Ncr_G_C2.596 28 8.3
NCR_G_C2.259 Ncr_G_C2.259 28 8.3
NCR_G_C2.022_2 Ncr_G_C2.022_2.seq Continuation (2 of 6) of Ncr_G... 28 8.3
NCR_G_C2.018 Ncr_G_C2.018 28 8.3
NCR_G_C2.049 Ncr_G_C2.049 28 8.3
NCR_G_C2.021 Ncr_G_C2.021 28 8.3
NCR_G_C2.201 Ncr_G_C2.201 24 9.8
>NCR_G_C2.265 Ncr_G_C2.265
Length = 91342
Score = 32.7 bits (65), Expect = 0.25
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 201 TRVAQRPPGGCENSLQILL 257
TR++QRP G CENS QI L
Sbjct: 67763 TRMSQRPLGSCENSSQISL 67819
>NCR_G_C2.521 Ncr_G_C2.521
Length = 150662
Score = 32.2 bits (64), Expect = 0.34
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = -1 / +2
Query: 330 LILWCEHETQTEISSTSDQETSAAREESGG 241
++ W +H T+ E+S E SA R ESGG
Sbjct: 76511 VLQWADHGTRAELSGRYVLEISAQRGESGG 76600
>NCR_G_C2.253 Ncr_G_C2.253
Length = 110253
Score = 30.8 bits (61), Expect = 0.89
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3 / -2
Query: 274 RDKCGERRIWRLFSHPPGGRCATLVVSGVF 185
R+ CG R +R S P G C +VSG +
Sbjct: 110138 REACGSNRAFRCSSRPKGAFCCIDLVSGKY 110049
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 30.8 bits (61), Expect = 0.89
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3 / +1
Query: 36 IHCEGTHDNENATRVCVYFSKGCQSLKRQNLITFPQTS*MSLFTPKTKNS 185
I T +NE A+R F+ C + + T +T+ ++FTP KN+
Sbjct: 269755 IDIPSTTENEFASRTLSRFTVDCNAPRSDYSATLRRTTSTAIFTPAHKNA 269904
Score = 30.4 bits (60), Expect = 1.2
Identities = 11/28 (39%), Positives = 16/28 (56%)
Frame = -1 / -1
Query: 312 HETQTEISSTSDQETSAAREESGGYSHI 229
HET T S+ +D + AAR + G H+
Sbjct: 168102 HETNTPASAKTDADADAARSQHGTNKHV 168019
>NCR_G_C2.095 Ncr_G_C2.095
Length = 82161
Score = 30.8 bits (61), Expect = 0.89
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3 / -3
Query: 412 KVLGCVASCKPLVKSPRARPKGCELFLAHP 323
K C +SC PL +SPR R + LA P
Sbjct: 11452 KASRCPSSCSPLRRSPRTRSRSLSRTLACP 11363
>NCR_G_C2.230 Ncr_G_C2.230
Length = 223934
Score = 30.8 bits (61), Expect = 0.89
Identities = 13/31 (41%), Positives = 18/31 (57%)
Frame = +3 / -1
Query: 138 PQTS*MSLFTPKTKNSNTPETTRVAQRPPGG 230
P+T+ +L P T + P TT A+RPP G
Sbjct: 142502 PKTTGRTLAPPATPSPPRPGTTPAARRPPAG 142410
>NCR_G_C2.298 Ncr_G_C2.298
Length = 253576
Score = 30.4 bits (60), Expect = 1.2
Identities = 13/32 (40%), Positives = 20/32 (61%)
Frame = +2 / +1
Query: 23 ISNTNTLRRNS*QRERYPSLRVLQQRMSIPKT 118
+++ T RRNS +R R P LR+ RMS ++
Sbjct: 130087 LTSPETCRRNSNKRHRRPRLRLRTSRMSTSRS 130182
>NCR_G_C2.213 Ncr_G_C2.213
Length = 33903
Score = 30.4 bits (60), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (58%)
Frame = +3 / -2
Query: 153 MSLFTPKTKNSNTPETTRVAQRPPGGCENSLQ 248
MSL +PKT +S++P TR + P SLQ
Sbjct: 28841 MSLASPKTSSSSSPNITRASCPAPSSTLLSLQ 28746
>NCR_G_C2.151 Ncr_G_C2.151
Length = 130934
Score = 30.4 bits (60), Expect = 1.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 293 ISVCVSCSHQRMSKKEFTTFGS 358
+++ S H +SKKEFTTFGS
Sbjct: 101988 VALFKSMPHGLLSKKEFTTFGS 101923
>NCR_G_C2.622 Ncr_G_C2.622
Length = 123388
Score = 27.2 bits (53), Expect(2) = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 244 RLFSHPPGGRCATLVVSGVF 185
RL PP RCA +V+ G+F
Sbjct: 22278 RLHCSPPACRCAVIVMIGLF 22219
Score = 20.8 bits (39), Expect(2) = 1.5
Identities = 7/15 (46%), Positives = 8/15 (52%)
Frame = -1 / -2
Query: 378 WSRVREQDPKVVNSF 334
W RV DP+ V F
Sbjct: 22338 WKRVLRGDPRAVKLF 22294
>NCR_G_C2.172 Ncr_G_C2.172
Length = 97267
Score = 29.9 bits (59), Expect = 1.7
Identities = 9/22 (40%), Positives = 14/22 (62%)
Frame = +1 / -2
Query: 394 RHSPRPWKSSFDLVLGLVYIAC 459
R R W+ + VLG++Y+AC
Sbjct: 72906 RQQGREWRGGYQQVLGVLYLAC 72841
>NCR_G_C2.125 Ncr_G_C2.125
Length = 138790
Score = 29.9 bits (59), Expect = 1.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3 / +3
Query: 403 GCVASCKPLVKSPRARPKGC 344
GC SC P + PR R +GC
Sbjct: 56955 GCWTSCVPSGRRPRCRARGC 57014
>NCR_G_C2.771 Ncr_G_C2.771
Length = 31467
Score = 29.9 bits (59), Expect = 1.7
Identities = 14/30 (46%), Positives = 19/30 (62%)
Frame = +2 / -1
Query: 290 EISVCVSCSHQRMSKKEFTTFGSCSRTLDQ 379
E + V+CS +MSK +FGS S TLD+
Sbjct: 5931 EYASYVACSVSKMSKLCVKSFGSSSSTLDR 5842
>NCR_G_C2.416 Ncr_G_C2.416
Length = 188447
Score = 25.3 bits (49), Expect(2) = 1.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / +2
Query: 394 ASCKPLVKSPRARPKG 347
+ C P KSP A+PKG
Sbjct: 85766 SQCPPPRKSPHAQPKG 85813
Score = 22.1 bits (42), Expect(2) = 1.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 461 LHAI*TKPRTRSKEL 417
LHA+ TKP+T S L
Sbjct: 85719 LHALDTKPQTHSISL 85763
>NCR_G_C2.941 Ncr_G_C2.941
Length = 9881
Score = 29.5 bits (58), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 218 ALCHSGSLWCI*VLSFW 168
+ CH G LWC+ V+ +W
Sbjct: 4156 SFCHVGRLWCLVVVLWW 4106
>NCR_G_C2.629 Ncr_G_C2.629
Length = 73227
Score = 29.5 bits (58), Expect = 2.3
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1 / +2
Query: 354 PKVVNSFLLILWCEHETQTEISSTSDQETSAAREESGGYSHIH 226
P + S L C E I S ET AR + Y+H+H
Sbjct: 47786 PDIGPSVLSGFCCCREISQTIHYPSSHETDEARRGNLTYTHLH 47914
>NCR_G_C2.043 Ncr_G_C2.043
Length = 199771
Score = 29.5 bits (58), Expect = 2.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3 / -2
Query: 397 VASCKPLVKSPRARPKGCELFLAHPL 320
+ C PL+ S + R GC L L H L
Sbjct: 77862 IVECSPLISSAQRRHSGCLLSLPHLL 77785
Score = 27.6 bits (54), Expect = 8.3
Identities = 15/62 (24%), Positives = 24/62 (38%)
Frame = -2 / -3
Query: 341 TLSCSSFGVSTRHRRKSLLHQTKRQVRREKNLEAILTSTRRALCHSGSLWCI*VLSFWCE 162
T C G R + ++H T R+ L++ ST C +C+ V+ W
Sbjct: 36689 TFFCRHVGFPKRGTKALVIHSTARR*SYAVTLQSQRVSTYSFHCSRNLEFCVLVIKTWTF 36510
Query: 161 KT 156
T
Sbjct: 36509 ST 36504
>NCR_G_C2.512 Ncr_G_C2.512
Length = 37570
Score = 29.5 bits (58), Expect = 2.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 186 NTPETTRVAQRPPGGCENS 242
N+P +TR + R PGGC+ S
Sbjct: 35095 NSPLSTRSSPRTPGGCDGS 35039
>NCR_G_C2.070 Ncr_G_C2.070
Length = 89843
Score = 29.0 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 15/31 (47%)
Frame = -1 / +2
Query: 324 LWCEHETQTEISSTSDQETSAAREESGGYSH 232
+WC H ++T S S T A E+ SH
Sbjct: 29852 IWCSHLSETPTSLLSTPTTMAVSREAREVSH 29944
>NCR_G_C2.375 Ncr_G_C2.375
Length = 58902
Score = 29.0 bits (57), Expect = 3.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3 / +1
Query: 403 GCVASCKPLVKSPRARPKGC 344
GC+ SC+ L KSP R C
Sbjct: 23884 GCIPSCETLAKSPSRRGAPC 23943
>NCR_G_C2.096 Ncr_G_C2.096
Length = 94631
Score = 29.0 bits (57), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (54%)
Frame = +2 / -2
Query: 302 CVSCSHQRMSKKEFTTFGSCSRTLDQG 382
C++CSHQ++S G C R D G
Sbjct: 17473 CLACSHQKLS*TAGIGSGGCRRAEDGG 17393
>NCR_G_C2.701 Ncr_G_C2.701
Length = 74456
Score = 29.0 bits (57), Expect = 3.2
Identities = 11/29 (37%), Positives = 17/29 (57%)
Frame = -2 / +3
Query: 278 TKRQVRREKNLEAILTSTRRALCHSGSLW 192
TKR+ + K +++IL R LC +LW
Sbjct: 29460 TKREEKNGKEIQSILQCLYRILCRITTLW 29546
>NCR_G_C2.147 Ncr_G_C2.147
Length = 124885
Score = 29.0 bits (57), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 375 SRVREQDPKVVNSFLLILWCEHETQT 298
+R +Q V+SFL WC H+TQT
Sbjct: 27906 ARKIQQGMVSVHSFLTRFWC*HQTQT 27829
>NCR_G_C2.038 Ncr_G_C2.038
Length = 68631
Score = 29.0 bits (57), Expect = 3.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 177 KNSNTPETTRVAQRPPGGCENSLQILLSP 263
++SNTP RVA RPP C + ++ P
Sbjct: 66520 EHSNTPRKKRVASRPP*FCTSPWKMETRP 66606
>NCR_G_C2.570 Ncr_G_C2.570
Length = 65061
Score = 28.6 bits (56), Expect = 4.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1 / +3
Query: 49 ELMTTRTLPEFACTSAKDVNP*NVRISSRSRKQAR*VF 162
+L T + LP F C NP ++ +++ RK R +F
Sbjct: 34815 DLPTEKRLPLFTCRLDPPTNPHSLFLAANERKSERVIF 34928
>NCR_G_C2.295 Ncr_G_C2.295
Length = 73468
Score = 28.6 bits (56), Expect = 4.4
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +3 / -3
Query: 138 PQTS*MSLFTPKTKNSNTPETTRVAQRPPGG 230
P++ + P + +S+ P ++R + PPG
Sbjct: 71519 PRSPSAAFCAPPSPSSSVPTSSRAPESPPGS 71427
>NCR_G_C2.654 Ncr_G_C2.654
Length = 73204
Score = 28.6 bits (56), Expect = 4.4
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2 / +1
Query: 86 VLQQRMSIPKTSESHHVPANKLDESFHTKN*ELKYTRDYQSG 211
+ + S+P + VPA LD S N K+ +D+ +G
Sbjct: 62968 IFWKHQSVPPANNI*RVPAKPLDSSQSRVNDSFKHVQDHDTG 63093
>NCR_G_C2.042_6 Ncr_G_C2.042_6.seq Continuation (6 of 6) of Ncr_G_C2.042
from base 500001
Length = 22496
Score = 28.6 bits (56), Expect = 4.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / -3
Query: 302 CVSCSHQRMSKKEFTTFGSCS 364
CV CSH+RMS++ SCS
Sbjct: 22296 CVYCSHRRMSERPACWSVSCS 22234
>NCR_G_C2.218 Ncr_G_C2.218
Length = 129490
Score = 28.6 bits (56), Expect = 4.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3 / -2
Query: 511 PSLLGLIKSSLFSHTSLCMLYKPSLEQDQRNSSKV 407
PS+LGL+ S F +LC+ Y+ L + S V
Sbjct: 103956 PSILGLLLGSFFLLLALCLGYRGGLIRKTARSDTV 103852
>NCR_G_C2.086 Ncr_G_C2.086
Length = 127572
Score = 24.0 bits (46), Expect(2) = 6.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2 / -2
Query: 341 FTTFGSCSRTLDQGFTASDTAQDLGRV 421
+T GSCS D G +D +GR+
Sbjct: 76829 WTVVGSCSMRPDCGDREADRVGGMGRI 76749
Score = 21.7 bits (41), Expect(2) = 6.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1 / -1
Query: 214 NALRVDVRIASRFFSRRTCLLV*CR 288
N+LRV +ASR +R +++ CR
Sbjct: 77001 NSLRVVTVVASRSTTRCGIVVIDCR 76927
>NCR_G_C2.128 Ncr_G_C2.128
Length = 227066
Score = 28.1 bits (55), Expect = 6.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3 / +2
Query: 168 PKTKNSNTPETTRVAQRP 221
P N NTP TT +A P
Sbjct: 45644 PNLPNENTPPTTALAPNP 45697
>NCR_G_C2.369 Ncr_G_C2.369
Length = 70897
Score = 28.1 bits (55), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3 / +3
Query: 241 LFSHPPGGRCATLVVSGVFEFLVF 170
L SHP G A L++SG+ F VF
Sbjct: 36630 LLSHPQSGG*AFLLISGLVNFPVF 36701
>NCR_G_C2.273 Ncr_G_C2.273
Length = 82197
Score = 28.1 bits (55), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (61%)
Frame = +1 / +2
Query: 232 VRIASRFFSRRTCLLV*CRRDFRLCLVLT 318
+RI+S F+S L C+R+F CL+ T
Sbjct: 48125 IRISSTFYSMAFSLFDGCQRNFDNCLIGT 48211
>NCR_G_C2.308 Ncr_G_C2.308
Length = 22688
Score = 28.1 bits (55), Expect = 6.0
Identities = 9/32 (28%), Positives = 16/32 (49%)
Frame = +2 / +3
Query: 77 SLRVLQQRMSIPKTSESHHVPANKLDESFHTK 172
SLR++ +S+P+ HH P +H +
Sbjct: 4323 SLRLVLPSVSVPRNQNEHHGPTELNQAGYHVR 4418
>NCR_G_C2.568 Ncr_G_C2.568
Length = 267169
Score = 28.1 bits (55), Expect = 6.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2 / +2
Query: 89 LQQRMSIPKTSESHHVPANKLDESFHTKN*ELKYTRDYQ 205
L+ S+ ++S+ +P K+D + + E KYT Y+
Sbjct: 151784 LEAISSVARSSKGAMMPVGKMDRQWGVREIEAKYTSRYK 151900
>NCR_G_C2.690 Ncr_G_C2.690
Length = 112273
Score = 28.1 bits (55), Expect = 6.0
Identities = 10/22 (45%), Positives = 17/22 (76%)
Frame = +3 / -1
Query: 153 MSLFTPKTKNSNTPETTRVAQR 218
+SLFT KT + + +TT++AQ+
Sbjct: 39628 LSLFTVKTVATISDQTTKMAQQ 39563
>NCR_G_C2.256 Ncr_G_C2.256
Length = 141304
Score = 28.1 bits (55), Expect = 6.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3 / -2
Query: 313 ARDTDGNLFYIRPRDKCGERRIWRLFSHPPG 221
AR T N RPR C RR WR P G
Sbjct: 62076 ARGTS*NPKPDRPRGSCSSRRSWRNSECPVG 61984
>NCR_G_C2.185 Ncr_G_C2.185
Length = 128626
Score = 28.1 bits (55), Expect = 6.0
Identities = 11/30 (36%), Positives = 15/30 (49%)
Frame = -2 / -1
Query: 383 TPGQESASKTQRL*TLSCSSFGVSTRHRRK 294
TPG K+ + LS +G ST HR +
Sbjct: 77995 TPGHHDRGKSVDISKLSIGEYGTSTTHRER 77906
>NCR_G_C2.497 Ncr_G_C2.497
Length = 192966
Score = 28.1 bits (55), Expect = 6.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 314 STRHRRKSLLHQTKRQVRREK 252
+TRH R+ LH RQ RRE+
Sbjct: 18540 TTRHPRRHHLHPLPRQARREQ 18478
>NCR_G_C2.658 Ncr_G_C2.658
Length = 36557
Score = 28.1 bits (55), Expect = 6.0
Identities = 10/19 (52%), Positives = 13/19 (67%)
Frame = +2 / +1
Query: 113 KTSESHHVPANKLDESFHT 169
+TS +HH PAN SFH+
Sbjct: 35347 ETSPNHHSPANSTTLSFHS 35403
>NCR_G_C2.205 Ncr_G_C2.205
Length = 197179
Score = 28.1 bits (55), Expect = 6.0
Identities = 10/32 (31%), Positives = 17/32 (52%)
Frame = -3 / +3
Query: 460 CMLYKPSLEQDQRNSSKVLGCVASCKPLVKSP 365
C + ++ ++ R SS + GC C P+ SP
Sbjct: 57948 CARFTSTINRNARLSSTISGCSGFCLPVSPSP 58043
>NCR_G_C2.042_3 Ncr_G_C2.042_3.seq Continuation (3 of 6) of Ncr_G_C2.042
from base 200001
Length = 110000
Score = 28.1 bits (55), Expect = 6.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3 / +3
Query: 400 CVASCKPLVKSPRARPKGCELFLAHP 323
C+ KP+ P+ P GC++ + HP
Sbjct: 94935 CLFIRKPVPPRPKVDPPGCKIRVMHP 95012
>NCR_G_C2.681 Ncr_G_C2.681
Length = 124507
Score = 28.1 bits (55), Expect = 6.0
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2 / +1
Query: 26 SNTNTLRRNS*QRERYPSLRVLQQRMSIPKTSESHHVPANK 148
S+ +++RR +R R+P L R P+ S P NK
Sbjct: 121291 SSRSSIRRRRRRRRRHPILGTHTHRYRNPRLSPRLTTPLNK 121413
>NCR_G_C2.202 Ncr_G_C2.202
Length = 148112
Score = 28.1 bits (55), Expect = 6.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2 / -2
Query: 473 PHISLHAI*TKPRTRSKELFQGLGL 399
PH+SL ++ ++ R RS+ +GLGL
Sbjct: 39103 PHVSLTSLSSQTRRRSQSRQEGLGL 39029
>NCR_G_C2.232 Ncr_G_C2.232
Length = 60784
Score = 24.0 bits (46), Expect(2) = 6.5
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3 / -1
Query: 262 GERRIWRLFS 233
G RR+W FS
Sbjct: 19168 GSRRLWSFFS 19139
Score = 21.7 bits (41), Expect(2) = 6.5
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -2 / -2
Query: 338 LSCSSFGVSTRHRRKSL 288
LSC FG HRR+ L
Sbjct: 19338 LSCRRFGQ*RWHRRREL 19288
>NCR_G_C2.744 Ncr_G_C2.744
Length = 55942
Score = 27.2 bits (53), Expect(2) = 6.6
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = +3 / +2
Query: 189 TPETTRVAQRPPGGCEN 239
T TT+ A P GCEN
Sbjct: 12809 TKNTTKTASNMPRGCEN 12859
Score = 18.5 bits (34), Expect(2) = 6.6
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 296 SVCVSCSHQRM 328
+VCV+C +R+
Sbjct: 12982 NVCVACQPRRL 13014
>NCR_G_C2.111 Ncr_G_C2.111
Length = 322912
Score = 27.2 bits (53), Expect(2) = 6.9
Identities = 15/43 (34%), Positives = 20/43 (45%)
Frame = -2 / -3
Query: 338 LSCSSFGVSTRHRRKSLLHQTKRQVRREKNLEAILTSTRRALC 210
L C S +RHRR+ LL +R+ RR + R A C
Sbjct: 125762 LVCGSEIPPSRHRRRRLLGTARRRWRRSLTNSQAVVDHRIAGC 125634
Score = 18.0 bits (33), Expect(2) = 6.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -3 / -3
Query: 451 YKPSLEQDQRNSSKVLGCVASCKPL 377
Y P+L R ++ L C C P+
Sbjct: 125918 YSPTLLYTLRPNACQLQCQYLCLPI 125844
>NCR_G_C2.430 Ncr_G_C2.430
Length = 226714
Score = 27.6 bits (54), Expect = 8.3
Identities = 10/39 (25%), Positives = 20/39 (50%)
Frame = +3 / +3
Query: 24 FRTLIHCEGTHDNENATRVCVYFSKGCQSLKRQNLITFP 140
+ +++ G DN+ A +C+ KG + K + + FP
Sbjct: 142815 YNSVLAIPGYEDNQEAREICLRLLKGLRVRKNELVEEFP 142931
>NCR_G_C2.271 Ncr_G_C2.271
Length = 96618
Score = 27.6 bits (54), Expect = 8.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3 / +3
Query: 472 HTSLCMLYKPSLEQDQRNSSKVLGCVASCKPLVKSPR 362
HT C++ +P SK G A KP VK+ R
Sbjct: 69495 HTDRCLMVRPETVVLSLRLSKAGGTAARRKPCVKAER 69605
>NCR_G_C2.488 Ncr_G_C2.488
Length = 91443
Score = 27.6 bits (54), Expect = 8.3
Identities = 12/32 (37%), Positives = 19/32 (58%)
Frame = +2 / -3
Query: 35 NTLRRNS*QRERYPSLRVLQQRMSIPKTSESH 130
N R ++ Q +RY S L ++P+TS+SH
Sbjct: 10249 NHSRSSAGQLQRYESTCALVSEPALPQTSDSH 10154
>NCR_G_C2.630 Ncr_G_C2.630
Length = 57359
Score = 27.6 bits (54), Expect = 8.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1 / +3
Query: 423 GTLPRSWAVSLAVNPWSRVR 364
GTL RSWAVS +V P S+ R
Sbjct: 52308 GTLCRSWAVSHSVFPDSKGR 52367
>NCR_G_C2.574 Ncr_G_C2.574
Length = 180542
Score = 27.6 bits (54), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (67%)
Frame = -3 / +2
Query: 475 SHTSLCMLYKPSLEQDQRNSSK 410
SH+S C YKP++ + RN +K
Sbjct: 83648 SHSSTCSQYKPNVSER*RNVTK 83713
>NCR_G_C2.407 Ncr_G_C2.407
Length = 67558
Score = 27.6 bits (54), Expect = 8.3
Identities = 11/26 (42%), Positives = 13/26 (49%)
Frame = -1 / +3
Query: 474 PTHLFACYINQA*NKIKGTLPRSWAV 397
P H+ CY IKG + RSW V
Sbjct: 5112 PCHMINCYGKSQPVTIKGNIYRSWIV 5189
>NCR_G_C2.214 Ncr_G_C2.214
Length = 116813
Score = 27.6 bits (54), Expect = 8.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1 / +2
Query: 462 FACYINQA*NKIKGTLPRSWAVSLAVNPWSRVREQD 355
FA +NQ + G L RS + + PWS+ E+D
Sbjct: 4916 FAAVVNQERTRAFGELVRSAPSLIPLLPWSKEFEKD 5023
>NCR_G_C2.148 Ncr_G_C2.148
Length = 98105
Score = 27.6 bits (54), Expect = 8.3
Identities = 14/39 (35%), Positives = 18/39 (45%)
Frame = -2 / -2
Query: 332 CSSFGVSTRHRRKSLLHQTKRQVRREKNLEAILTSTRRA 216
CS+ ST HRR +T + R A L+ TR A
Sbjct: 65653 CSTIQSSTLHRRSRPTSKTTNEARPPDPSRAFLSRTRAA 65537
>NCR_G_C2.596 Ncr_G_C2.596
Length = 84018
Score = 27.6 bits (54), Expect = 8.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1 / -1
Query: 294 ISSTSDQETSAAREESGGYSHIHPE 220
ISS D T A +E+GG SH P+
Sbjct: 56136 ISSDGDGATFAGPDETGGDSHPQPQ 56062
>NCR_G_C2.259 Ncr_G_C2.259
Length = 185660
Score = 27.6 bits (54), Expect = 8.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3 / +2
Query: 511 PSLLGLIKSSLFSHTSLCMLYKPSLEQDQRNSSKVL 404
P++ G + SL + TSLC L P +Q + + S ++
Sbjct: 117029 PAVSGSLACSLSTRTSLCFLSGPGSQQGRVSLSPMM 117136
>NCR_G_C2.022_2 Ncr_G_C2.022_2.seq Continuation (2 of 6) of Ncr_G_C2.022
from base 100001
Length = 110000
Score = 27.6 bits (54), Expect = 8.3
Identities = 13/32 (40%), Positives = 17/32 (52%)
Frame = +2 / -3
Query: 203 QSGTTPSGWM*E*PPDSSLAALVSWSDVEEIS 298
++G S W+ E PP LAAL+ D IS
Sbjct: 88437 RAGPMSSSWLGEKPPAMDLAALLKGIDSASIS 88342
>NCR_G_C2.018 Ncr_G_C2.018
Length = 27611
Score = 27.6 bits (54), Expect = 8.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 251 SSLAALVSWSDVEEISVCVSCSH 319
SS+ A +W D + S+C +C+H
Sbjct: 17302 SSVTAAQAWRDGDGCSLCKACAH 17370
>NCR_G_C2.049 Ncr_G_C2.049
Length = 42397
Score = 27.6 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / -1
Query: 265 CGERRIWRLFSHPPGGRC 212
CGER WR + GRC
Sbjct: 4753 CGERGCWRTYQTQQWGRC 4700
>NCR_G_C2.021 Ncr_G_C2.021
Length = 86769
Score = 27.6 bits (54), Expect = 8.3
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -3 / +2
Query: 466 SLCMLYKPSLEQDQRNSSKVLGCVASCKPLVKSPRARPK 350
SL + Y P NS GC C P +K P K
Sbjct: 776 SLLVSYSPHTFSQGINSVLTAGCYVPCLPCLKPPSVGTK 892
>NCR_G_C2.201 Ncr_G_C2.201
Length = 19963
Score = 24.0 bits (46), Expect(2) = 9.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 411 RSWAVSLAVNPWSRVRE 361
R WA +A NPW R+++
Sbjct: 8215 RFWAP*VAGNPWRRLQQ 8165
Score = 21.2 bits (40), Expect(2) = 9.8
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = -3 / -1
Query: 247 WRLFSHPPGGRC 212
WR PG RC
Sbjct: 8182 WRRLQQLPGQRC 8147
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 49233417
Number of Sequences: 995
Number of extensions: 774469
Number of successful extensions: 39289
Number of sequences better than 10.0: 62
length of query: 171
length of database: 12,656,439
effective HSP length: 47
effective length of query: 123
effective length of database: 12,609,674
effective search space: 1550989902
effective search space used: 1550989902
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 54 (27.6 bits)