TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1612_B03_D0
6ZT.seq
(577 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.497 Ncr_G_C2.497 114 8e-26
NCR_G_C2.690 Ncr_G_C2.690 32 0.40
NCR_G_C2.298 Ncr_G_C2.298 32 0.55
NCR_G_C2.696 Ncr_G_C2.696 32 0.55
NCR_G_C2.465 Ncr_G_C2.465 31 0.76
NCR_G_C2.211 Ncr_G_C2.211 31 0.76
NCR_G_C2.208 Ncr_G_C2.208 30 1.4
NCR_G_C2.184 Ncr_G_C2.184 30 2.0
NCR_G_C2.164 Ncr_G_C2.164 26 2.4
NCR_G_C2.076 Ncr_G_C2.076 29 2.7
NCR_G_C2.101 Ncr_G_C2.101 29 2.7
NCR_G_C2.224 Ncr_G_C2.224 29 2.7
NCR_G_C2.069 Ncr_G_C2.069 29 2.7
NCR_G_C2.645 Ncr_G_C2.645 29 2.7
NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G... 29 2.7
NCR_G_C2.741 Ncr_G_C2.741 29 3.7
NCR_G_C2.128 Ncr_G_C2.128 29 3.7
NCR_G_C2.236 Ncr_G_C2.236 29 5.1
NCR_G_C2.186 Ncr_G_C2.186 29 5.1
NCR_G_C2.296 Ncr_G_C2.296 29 5.1
NCR_G_C2.438 Ncr_G_C2.438 29 5.1
NCR_G_C2.647 Ncr_G_C2.647 29 5.1
NCR_G_C2.075 Ncr_G_C2.075 29 5.1
NCR_G_C2.358 Ncr_G_C2.358 29 5.1
NCR_G_C2.329 Ncr_G_C2.329 29 5.1
NCR_G_C2.185 Ncr_G_C2.185 28 5.2
NCR_G_C2.672 Ncr_G_C2.672 24 5.5
NCR_G_C2.654 Ncr_G_C2.654 27 5.6
NCR_G_C2.416 Ncr_G_C2.416 26 6.5
NCR_G_C2.512 Ncr_G_C2.512 28 7.0
NCR_G_C2.509 Ncr_G_C2.509 28 7.0
NCR_G_C2.124 Ncr_G_C2.124 28 7.0
NCR_G_C2.667 Ncr_G_C2.667 28 7.0
NCR_G_C2.924 Ncr_G_C2.924 28 7.0
NCR_G_C2.539 Ncr_G_C2.539 28 7.0
NCR_G_C2.256 Ncr_G_C2.256 28 7.0
NCR_G_C2.176 Ncr_G_C2.176 28 7.0
NCR_G_C2.055 Ncr_G_C2.055 28 7.0
NCR_G_C2.739 Ncr_G_C2.739 28 7.0
NCR_G_C2.523 Ncr_G_C2.523 28 7.0
NCR_G_C2.537 Ncr_G_C2.537 28 7.0
NCR_G_C2.172 Ncr_G_C2.172 28 7.0
NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G... 28 7.0
NCR_G_C2.205 Ncr_G_C2.205 28 7.0
NCR_G_C2.073 Ncr_G_C2.073 28 7.0
NCR_G_C2.110 Ncr_G_C2.110 23 7.0
NCR_G_C2.163 Ncr_G_C2.163 26 7.7
NCR_G_C2.585 Ncr_G_C2.585 26 8.2
NCR_G_C2.663 Ncr_G_C2.663 22 8.5
NCR_G_C2.111 Ncr_G_C2.111 28 9.7
NCR_G_C2.404 Ncr_G_C2.404 28 9.7
NCR_G_C2.508 Ncr_G_C2.508 28 9.7
NCR_G_C2.568 Ncr_G_C2.568 28 9.7
NCR_G_C2.066 Ncr_G_C2.066 28 9.7
NCR_G_C2.742 Ncr_G_C2.742 28 9.7
NCR_G_C2.356 Ncr_G_C2.356 28 9.7
NCR_G_C2.297 Ncr_G_C2.297 28 9.7
NCR_G_C2.215 Ncr_G_C2.215 28 9.7
NCR_G_C2.059 Ncr_G_C2.059 28 9.7
NCR_G_C2.428 Ncr_G_C2.428 28 9.7
NCR_G_C2.135 Ncr_G_C2.135 24 9.8
>NCR_G_C2.497 Ncr_G_C2.497
Length = 192966
Score = 114 bits (243), Expect = 8e-26
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +1 / -2
Query: 25 KDLEMAVENLSEMFEKPITELSDPKLKVDIMDKTSYCNKRRVILLEDTAENLANGEWNFN 204
KDLEMAVENLSEMFEKP+ +L+ P LKVDIMDKTSYCNKRRVILLEDTAENL G+ F
Sbjct: 24809 KDLEMAVENLSEMFEKPVQDLAQPGLKVDIMDKTSYCNKRRVILLEDTAENLQKGKTFFA 24630
Query: 205 ADLLAATTS 231
++ T+
Sbjct: 24629 GFVILVGTN 24603
Score = 91.3 bits (193), Expect = 6e-19
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = -3 / +1
Query: 188 PFARFSAVSSRRITRRLLQYDVLSIISTLSLGSDNSVMGFSNISDKFSTAISRSF 24
PF RFSAVSSRR+TRRLLQYDVLS++STL G S GFSNISD+FSTAIS+SF
Sbjct: 24646 PF*RFSAVSSRRMTRRLLQYDVLSMMSTLRPGWARSWTGFSNISDRFSTAISKSF 24810
Score = 50.1 bits (103), Expect = 2e-06
Identities = 20/55 (36%), Positives = 37/55 (66%)
Frame = -2 / +3
Query: 180 QVLGRILKEDNTTLVAV*RFIHNINFEFGVR*FCNGLLKHFRQVLHSHLKIFWLS 16
+VL +L++++ LVAV R +H+++ E G+ + LLKH QVL+ HL++ ++
Sbjct: 24654 KVLSSVLQKNDAPLVAVRRLVHDVHLEAGLGKILDRLLKHLGQVLYRHLQVLLIA 24818
Score = 40.5 bits (82), Expect = 0.001
Identities = 17/36 (47%), Positives = 22/36 (60%)
Frame = +2 / -3
Query: 35 RWLWRTCLKCLRSPLQNYLTPNSKLILWIKRHTATS 142
RW RTC +CLRS + +P S+ W +R TATS
Sbjct: 24799 RWR*RTCPRCLRSRSRILPSPASRWTSWTRRRTATS 24692
Score = 28.6 bits (56), Expect = 5.1
Identities = 21/57 (36%), Positives = 31/57 (53%)
Frame = +3 / -1
Query: 15 ETTKRS*DGCGELV*NV*EAHYRII*PQTQS*YYG*NVILQQASCYPP*GYGREPGK 185
E +K DG E V +V*EA + Q ++G +V+LQQA+ + G+ EP K
Sbjct: 24819 EQSKGLGDGGREPVRDV*EAGPGSCPARPQGGHHGQDVVLQQAARHSSGGHC*EPSK 24649
>NCR_G_C2.690 Ncr_G_C2.690
Length = 112273
Score = 32.2 bits (64), Expect = 0.40
Identities = 15/36 (41%), Positives = 18/36 (49%)
Frame = -1 / -2
Query: 577 NSKSKQVVPNRGNGANAWEVI*QDDTL*VEIKPPCP 470
N S+Q PN+ N N W + TL* K PCP
Sbjct: 53025 NESSEQKGPNQPNRTNGWFSATKSPTL*RLAKTPCP 52918
Score = 28.1 bits (55), Expect = 7.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2 / -3
Query: 14 RDNQKILRWLWRTCLKCLRSPLQNYLTPNSKLIL 115
++N K+ + + L+C R+ Y +PNS++ L
Sbjct: 62417 QENMKLTKCAGLSTLRCARNSALTYSSPNSRISL 62316
>NCR_G_C2.298 Ncr_G_C2.298
Length = 253576
Score = 31.8 bits (63), Expect = 0.55
Identities = 14/44 (31%), Positives = 19/44 (42%)
Frame = +1 / -2
Query: 325 RARHREAMS*TPSPCHVASVRPR*LANQRSTCPLGKYTLRQSWY 456
R +H E * P PCH ++ + R P G+ TL Y
Sbjct: 93129 RMQHSELEE*QPDPCHFLRIQAKVRQGSRYCHPKGELTLANHCY 92998
>NCR_G_C2.696 Ncr_G_C2.696
Length = 38228
Score = 31.8 bits (63), Expect = 0.55
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 41 LWRTCLKCLRSPLQNYLTPNSKL 109
+WRTCL C SPL+ + P S L
Sbjct: 33106 VWRTCLICAFSPLRAWSVPGSFL 33174
Score = 29.5 bits (58), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / +2
Query: 219 CHYLCTCSSSLKYGC 263
CHY+C CSS L C
Sbjct: 36782 CHYICHCSSPLVCAC 36826
>NCR_G_C2.465 Ncr_G_C2.465
Length = 18593
Score = 31.3 bits (62), Expect = 0.76
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2 / +3
Query: 35 RWLWRTCLKCLRSPLQNYLTPNSKLILWIKRHTATSVVLSSLRIRPRTWQMANGTLTQ 208
R W CL+ + + + S IL K T +++SSL R W+ N + +Q
Sbjct: 5421 RMTWTPCLRQVVATPATIVMKTSNWILMKKTSTTRHLLVSSLNKRNWAWEATNWSCSQ 5594
>NCR_G_C2.211 Ncr_G_C2.211
Length = 17629
Score = 31.3 bits (62), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 119 IKRHTATSVVLSSLRIRPRTWQMANGTLTQ 208
I + TAT+VV+++LR+ W+M T T+
Sbjct: 5100 IMKPTATAVVMAALRLSSSDWKMLRPTTTE 5189
>NCR_G_C2.208 Ncr_G_C2.208
Length = 202230
Score = 30.4 bits (60), Expect = 1.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 306 TWQEYEIPMKIVLYC 262
TW +Y +P K VLYC
Sbjct: 122885 TWLQYAVPAKFVLYC 122929
Score = 29.9 bits (59), Expect = 2.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 493 PTRCHPAI*LPMHLPHCPDSA 555
P R HP + P HLP PD+A
Sbjct: 26750 PVREHPLLRSPRHLPAAPDNA 26688
>NCR_G_C2.184 Ncr_G_C2.184
Length = 27440
Score = 29.9 bits (59), Expect = 2.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3 / +3
Query: 236 GAEVVAAKRSALKFHSPFARFSAVSSRRITRRLLQ 132
G + A R A + +PF RF+A S R+T R L+
Sbjct: 19413 GGSMFAVCRCARRSGNPFQRFAAAS*GRVTMRTLR 19517
>NCR_G_C2.164 Ncr_G_C2.164
Length = 75564
Score = 25.8 bits (50), Expect(2) = 2.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / -3
Query: 194 GTLTQIFWLPLPLHLF 241
GT T +W PLPL +F
Sbjct: 29650 GTCTSNWWKPLPLDVF 29603
Score = 21.7 bits (41), Expect(2) = 2.4
Identities = 6/14 (42%), Positives = 8/14 (56%)
Frame = +2 / -2
Query: 227 PLHLFIVAEVWMQY 268
PLHLF + +Y
Sbjct: 29522 PLHLFCYTSIQCRY 29481
>NCR_G_C2.076 Ncr_G_C2.076
Length = 241344
Score = 29.5 bits (58), Expect = 2.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3 / -2
Query: 474 HGGLISTYKVSSCYMTSHAFAPLPRFGTTCFDL 572
H L+ T V+SC + HA LP F ++ F +
Sbjct: 105893 HARLLETKTVASCNHSIHASELLPEFSSSVFSV 105795
>NCR_G_C2.101 Ncr_G_C2.101
Length = 209184
Score = 29.5 bits (58), Expect = 2.7
Identities = 11/31 (35%), Positives = 15/31 (47%)
Frame = -2 / +3
Query: 414 RSLIGQSSWPHAGDMARTGSSTHSFPVSSTT 322
R + WP + R+G+S P SSTT
Sbjct: 104577 RKMSPTPGWPSSSSSTRSGASPRPLPASSTT 104669
>NCR_G_C2.224 Ncr_G_C2.224
Length = 69257
Score = 29.5 bits (58), Expect = 2.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 29 ILRWLWRTCLKCLRS 73
++RW WR C C+RS
Sbjct: 26575 VVRWWWRWCFFCIRS 26531
>NCR_G_C2.069 Ncr_G_C2.069
Length = 39331
Score = 29.5 bits (58), Expect = 2.7
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 505 HPAI*LPMHLPHC 543
HP+I LP+H PHC
Sbjct: 18742 HPSIQLPLHHPHC 18780
>NCR_G_C2.645 Ncr_G_C2.645
Length = 53172
Score = 29.5 bits (58), Expect = 2.7
Identities = 11/35 (31%), Positives = 19/35 (53%)
Frame = +2 / -2
Query: 419 VPWASIRSGNPGMQHLVRTWRFNLYLQGVILLYDF 523
VPW + +G + + +T+ F L + GV+L F
Sbjct: 49748 VPWTRLSTGEKAGRAVQQTFNFGLVILGVVLTVRF 49644
Score = 27.6 bits (54), Expect = 9.7
Identities = 10/35 (28%), Positives = 20/35 (56%)
Frame = -2 / +3
Query: 459 CIPGLPERILAQGTSRSLIGQSSWPHAGDMARTGS 355
C +P+ +L T ++IG++ PH +++ GS
Sbjct: 10785 CKTSVPQTLLIGDTYNNIIGRTLNPHNNNLSCGGS 10889
>NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G_C2.022
from base 400001
Length = 110000
Score = 29.5 bits (58), Expect = 2.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2 / +3
Query: 80 QNYLTPNSKLILWIKRHTATSVVLSSLRIRPRT 178
+ Y++ KL LW+ R T T LSS P T
Sbjct: 79767 REYVSSALKLALWVPRATTTKTHLSSRSCHPPT 79865
>NCR_G_C2.741 Ncr_G_C2.741
Length = 27510
Score = 29.0 bits (57), Expect = 3.7
Identities = 13/32 (40%), Positives = 17/32 (52%)
Frame = +1 / +3
Query: 355 TPSPCHVASVRPR*LANQRSTCPLGKYTLRQS 450
TP P V P *++ +S CP G+YT S
Sbjct: 17133 TPLPILFCCVNPV*ISWTQSACPHGQYTRHSS 17228
>NCR_G_C2.128 Ncr_G_C2.128
Length = 227066
Score = 29.0 bits (57), Expect = 3.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2 / +1
Query: 423 GTSRSLIGQSSWPHAGDMARTGSSTHSFPV 334
G SL SWPH + R+G++T PV
Sbjct: 208897 GCRHSLE*PFSWPHRRSLCRSGAATKPRPV 208986
Score = 27.6 bits (54), Expect = 9.7
Identities = 10/19 (52%), Positives = 12/19 (62%)
Frame = +2 / +1
Query: 386 GQDDWPINDLLVPWASIRS 442
G+ W + LLVPW IRS
Sbjct: 151810 GRPSWKSSFLLVPW*RIRS 151866
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 28.6 bits (56), Expect = 5.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2 / -1
Query: 80 QNYLTPNSKLILWIKRHTATSVVLSSLRIR 169
+N +P S + W K TA S+ S+R+R
Sbjct: 148464 RNRRSPASMSVTWKKALTARSLTNKSIRLR 148375
>NCR_G_C2.186 Ncr_G_C2.186
Length = 67459
Score = 28.6 bits (56), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1 / +2
Query: 487 SLPTRCHPAI*LPMHLPHCPDSAPLVS 567
++ T C AI*LP H+P P + P +S
Sbjct: 18932 TVQTACSLAI*LPPHIPT*PTNTPSLS 19012
>NCR_G_C2.296 Ncr_G_C2.296
Length = 137551
Score = 28.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 16/31 (50%)
Frame = +2 / -3
Query: 368 AMSPACGQDDWPINDLLVPWASIRSGNPGMQ 460
A S C Q + P + L+ WAS S P +Q
Sbjct: 45332 AQSLICRQANAPYHSLITLWASRSSRPPVLQ 45240
Score = 27.6 bits (54), Expect = 9.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 307 YLARIRNSDENRIVLHPYFS 248
Y RIR DEN +L+P+FS
Sbjct: 54089 YSCRIRK*DENVDILNPFFS 54148
>NCR_G_C2.438 Ncr_G_C2.438
Length = 62276
Score = 28.6 bits (56), Expect = 5.1
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 358 PSPCHVASVRPR 393
PSPCH + VRPR
Sbjct: 14966 PSPCHRSPVRPR 14931
>NCR_G_C2.647 Ncr_G_C2.647
Length = 70271
Score = 28.6 bits (56), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = +1 / -3
Query: 271 YDFHRNFVFLPSKDSIHCRARH 336
YDFH +F F HCR++H
Sbjct: 24624 YDFHLHFRFYRDCHCHHCRSQH 24559
>NCR_G_C2.075 Ncr_G_C2.075
Length = 33884
Score = 28.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 19/32 (58%)
Frame = -2 / +3
Query: 405 IGQSSWPHAGDMARTGSSTHSFPVSSTTMNAV 310
I Q+ +PH GDM SST + ++T NA+
Sbjct: 11079 IYQTIFPH*GDMIFCSSSTTTTTTTTTITNAI 11174
>NCR_G_C2.358 Ncr_G_C2.358
Length = 98362
Score = 28.6 bits (56), Expect = 5.1
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = +2 / +2
Query: 221 PLPLHLFIVAEVWMQYNTIFIGISYS 298
PLP+H F + W Y T G +S
Sbjct: 75101 PLPIHPFADEQGWSSYATAI*GNLHS 75178
>NCR_G_C2.329 Ncr_G_C2.329
Length = 53959
Score = 28.6 bits (56), Expect = 5.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1 / -3
Query: 364 PCHVASVRPR*LANQRSTCPLG 429
PCH ASV R* RST LG
Sbjct: 23381 PCHCASVMER*RITPRSTLVLG 23316
>NCR_G_C2.185 Ncr_G_C2.185
Length = 128626
Score = 28.1 bits (55), Expect(2) = 5.2
Identities = 15/37 (40%), Positives = 19/37 (50%)
Frame = -3 / -3
Query: 197 FHSPFARFSAVSSRRITRRLLQYDVLSIISTLSLGSD 87
F SPFAR+ S +R +L YDV + TL D
Sbjct: 64991 FSSPFARYKRGSLASNSRYILSYDVSLNL*TLGCVMD 64881
Score = 18.0 bits (33), Expect(2) = 5.2
Identities = 7/25 (28%), Positives = 11/25 (44%)
Frame = -2 / -3
Query: 255 TSATMNRCRGSGSQKICVKVPFAIC 181
TSAT + +C+ + IC
Sbjct: 65120 TSATPPSMPSAPLSSLCLVLGIPIC 65046
>NCR_G_C2.672 Ncr_G_C2.672
Length = 83703
Score = 24.0 bits (46), Expect(2) = 5.5
Identities = 10/24 (41%), Positives = 15/24 (61%)
Frame = +2 / -1
Query: 50 TCLKCLRSPLQNYLTPNSKLILWI 121
TCL+ LR+ + P++ L LWI
Sbjct: 78957 TCLRHLRAIHHRHHHPSTILTLWI 78886
Score = 22.1 bits (42), Expect(2) = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / -3
Query: 193 WNFNADLLAATTSA 234
W + +DLLA+ T A
Sbjct: 78835 WTYGSDLLASQTGA 78794
>NCR_G_C2.654 Ncr_G_C2.654
Length = 73204
Score = 26.7 bits (52), Expect(2) = 5.6
Identities = 10/35 (28%), Positives = 13/35 (36%)
Frame = +2 / -1
Query: 359 PVLAMSPACGQDDWPINDLLVPWASIRSGNPGMQH 463
P P P N + PW ++R G P H
Sbjct: 48649 PTAHSQPDASLPSNPANLVATPWLNMRQGKPAPSH 48545
Score = 19.4 bits (36), Expect(2) = 5.6
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +1 / -2
Query: 529 HLPHCPDSAPL 561
+LPH P PL
Sbjct: 48507 NLPHQPQLGPL 48475
>NCR_G_C2.416 Ncr_G_C2.416
Length = 188447
Score = 25.8 bits (50), Expect(2) = 6.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2 / -3
Query: 443 GNPGMQHLVRTWRFNLYL 496
GNP M ++R WR YL
Sbjct: 184002 GNPMMSVILRQWRLRKYL 183949
Score = 19.8 bits (37), Expect(2) = 6.5
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1 / -1
Query: 361 SPCHVASVRPR*LANQRSTCPLGK 432
SPC + N+R CP G+
Sbjct: 184160 SPCLTLATAIHGRRNRRRCCPQGQ 184089
>NCR_G_C2.512 Ncr_G_C2.512
Length = 37570
Score = 28.1 bits (55), Expect = 7.0
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = -1 / +3
Query: 370 GKDWEFNS*LPCV*HDNECCLY 305
G DWEF+ * C * + CC +
Sbjct: 27027 G*DWEFDG*FCCC*CQDSCCCW 27092
>NCR_G_C2.509 Ncr_G_C2.509
Length = 86172
Score = 28.1 bits (55), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2 / -1
Query: 357 SSTHSFPVSSTTMNAVFTWQEYE 289
S +H+ P S T AVFTW ++
Sbjct: 83391 SQSHTHPNSHLTAFAVFTWTSFQ 83323
Score = 27.6 bits (54), Expect = 9.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2 / +2
Query: 377 PACGQDDWPINDLLVPWASIRSGNPGMQHLVRTWRFNLYL 496
P G + P +++ A + +G HL TW NL++
Sbjct: 45125 PESGPEQVPCQ*MVLSMAELLNGRMKATHLHSTWAVNLFV 45244
>NCR_G_C2.124 Ncr_G_C2.124
Length = 36105
Score = 28.1 bits (55), Expect = 7.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3 / +3
Query: 144 SCYPP*GYGREPGKWRMEL*RRSFGCHYLC 233
SC+ P GY E G+ RR GC C
Sbjct: 19254 SCHRPQGYPTEQGRRNFRRQRRHSGCQRHC 19343
>NCR_G_C2.667 Ncr_G_C2.667
Length = 35070
Score = 28.1 bits (55), Expect = 7.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1 / +1
Query: 187 HLPGSRPYPQGG*HDACCSMTFYP*YQL 104
HL R G H C TFY *YQL
Sbjct: 5029 HLEQQRGVTMEGTHRKLCGFTFYI*YQL 5112
>NCR_G_C2.924 Ncr_G_C2.924
Length = 15574
Score = 28.1 bits (55), Expect = 7.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2 / -2
Query: 299 CQVKTAFIVVLDTGKL*VELPVLAMSPACGQDDWP 403
C F+ LDTG +P+L S AC Q P
Sbjct: 6804 CSNSPNFLTSLDTGLASFSIPIL*TSSACAQRPSP 6700
>NCR_G_C2.539 Ncr_G_C2.539
Length = 95985
Score = 28.1 bits (55), Expect = 7.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2 / -2
Query: 396 SSWPHAGDMARTGSSTHSFPVSSTTMNAVFTWQEYEIPMKIVLYCIHT 253
S+W H T S + T+ + TW E +P+K+ L+ I T
Sbjct: 45962 SAWSHPSIFGITSQSNSPDKRNVTSAMS*PTWFESVVPLKVGLHKIAT 45819
>NCR_G_C2.256 Ncr_G_C2.256
Length = 141304
Score = 28.1 bits (55), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2 / +1
Query: 92 TPNSKLILWIKRHTATSVVLSSLRIRPRTWQMAN 193
TP KL +W++ T SV +S L +TW A+
Sbjct: 43162 TPFYKLEIWLELRTIISVAVSDLER*LQTWLHAS 43263
>NCR_G_C2.176 Ncr_G_C2.176
Length = 48427
Score = 28.1 bits (55), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1 / -1
Query: 289 FVFLPSKDSIHCRARHREAMS*TPSPCHVASVRPR 393
F+ PS++ H R R A + PC AS PR
Sbjct: 11983 FLRTPSRNQRHHRQHQRRAPAWQSPPCLYASTTPR 11879
>NCR_G_C2.055 Ncr_G_C2.055
Length = 79879
Score = 28.1 bits (55), Expect = 7.0
Identities = 11/23 (47%), Positives = 15/23 (64%)
Frame = +2 / -2
Query: 140 SVVLSSLRIRPRTWQMANGTLTQ 208
SV +S+R+ PR+WQ G L Q
Sbjct: 3957 SVEHTSVRLNPRSWQKHPGNLRQ 3889
>NCR_G_C2.739 Ncr_G_C2.739
Length = 74477
Score = 28.1 bits (55), Expect = 7.0
Identities = 10/30 (33%), Positives = 21/30 (69%)
Frame = +2 / -3
Query: 242 IVAEVWMQYNTIFIGISYSCQVKTAFIVVL 331
++ E + ++++FIG++ S V T F+V+L
Sbjct: 37929 VLLECGILFHSVFIGMALSVSVGTDFVVLL 37840
>NCR_G_C2.523 Ncr_G_C2.523
Length = 130581
Score = 28.1 bits (55), Expect = 7.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / -2
Query: 146 RRLLQYDVLSIISTLSLGSDNSVMGFSNISD 54
R LL + +I LSLGS VMG +SD
Sbjct: 124736 RSLLDIPLRLLIGRLSLGSLGGVMGRQRVSD 124644
>NCR_G_C2.537 Ncr_G_C2.537
Length = 40376
Score = 28.1 bits (55), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 389 QDDWPINDLLVPWASIRSGNP 451
QDDW + +L+V +I S NP
Sbjct: 17253 QDDWSVEELVVDVEAICSSNP 17315
>NCR_G_C2.172 Ncr_G_C2.172
Length = 97267
Score = 28.1 bits (55), Expect = 7.0
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = +2 / -2
Query: 425 WASIRSGNPGMQHLVRTWRFNL 490
W + G PG+ + RTW F L
Sbjct: 66285 WEDVDRGLPGIPPMKRTWNFEL 66220
>NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G_C2.022
from base 200001
Length = 110000
Score = 28.1 bits (55), Expect = 7.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2 / +2
Query: 140 SVVLSSLRIRPRTWQMANGTLTQIF 214
S+ S LR+RPR + GT T +
Sbjct: 31997 SMTTSRLRLRPRNSRSTVGTSTTTY 32071
>NCR_G_C2.205 Ncr_G_C2.205
Length = 197179
Score = 28.1 bits (55), Expect = 7.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3 / +2
Query: 186 WRMEL*RRSFGCHYLCTC 239
WR+ R + GCHYL C
Sbjct: 73814 WRLSQRRWTAGCHYLVVC 73867
>NCR_G_C2.073 Ncr_G_C2.073
Length = 94453
Score = 28.1 bits (55), Expect = 7.0
Identities = 10/18 (55%), Positives = 11/18 (60%)
Frame = +3 / +1
Query: 510 CYMTSHAFAPLPRFGTTC 563
C T H APLP+ G TC
Sbjct: 4087 CGTTGHRSAPLPKRGRTC 4140
>NCR_G_C2.110 Ncr_G_C2.110
Length = 102633
Score = 23.1 bits (44), Expect(2) = 7.0
Identities = 7/13 (53%), Positives = 11/13 (83%)
Frame = +2 / -1
Query: 185 MANGTLTQIFWLP 223
+A+ LT++FWLP
Sbjct: 44202 LADT*LTRVFWLP 44164
Score = 22.6 bits (43), Expect(2) = 7.0
Identities = 8/22 (36%), Positives = 11/22 (49%)
Frame = +3 / -2
Query: 219 CHYLCTCSSSLKYGCNTIRFSS 284
CH+ C C + + N R SS
Sbjct: 44159 CHHGCLCHNGPWFSSNRCRCSS 44094
>NCR_G_C2.163 Ncr_G_C2.163
Length = 52618
Score = 26.3 bits (51), Expect(2) = 7.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2 / +3
Query: 59 KCLRSPLQNYLTPNSKLILWIKRHTATSVVLSSLRIR 169
KCL + + +LT S L L + +H +V L++ +R
Sbjct: 15885 KCLSTSVLLHLTIYSLLYLALNKHGIKNVKLTTRCLR 15995
Score = 19.4 bits (36), Expect(2) = 7.7
Identities = 5/6 (83%), Positives = 6/6 (99%)
Frame = +2 / +1
Query: 44 WRTCLK 61
WRTCL+
Sbjct: 15808 WRTCLR 15825
>NCR_G_C2.585 Ncr_G_C2.585
Length = 245975
Score = 26.3 bits (51), Expect(2) = 8.2
Identities = 15/43 (34%), Positives = 21/43 (47%)
Frame = -3 / -3
Query: 266 IASILQRR*TGAEVVAAKRSALKFHSPFARFSAVSSRRITRRL 138
+A +L R +G EV K+ + + RFS SRR R L
Sbjct: 77586 LAVLLLREASGVEVGEVKKGWTRASAAVKRFSGSYSRREARSL 77458
Score = 18.9 bits (35), Expect(2) = 8.2
Identities = 7/18 (38%), Positives = 10/18 (54%)
Frame = -2 / -1
Query: 444 PERILAQGTSRSLIGQSS 391
P + GTSR + +SS
Sbjct: 77690 PATRVCTGTSRF*VLRSS 77637
>NCR_G_C2.663 Ncr_G_C2.663
Length = 35951
Score = 22.1 bits (42), Expect(3) = 8.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 358 PSPCHVASVRPR*LANQRSTC 420
P+P H+ V+P+ + S+C
Sbjct: 7157 PAPPHITPVKPQVSPSPTSSC 7219
Score = 21.2 bits (40), Expect(3) = 8.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / +3
Query: 523 PMHLPHCP 546
P+HLPH P
Sbjct: 7329 PLHLPHDP 7352
Score = 19.8 bits (37), Expect(3) = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1 / +1
Query: 535 PHCPDSAPLVSTY 573
PHCP A +S +
Sbjct: 7384 PHCPVPAICLSPF 7422
>NCR_G_C2.111 Ncr_G_C2.111
Length = 322912
Score = 27.6 bits (54), Expect = 9.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 459 CIPGLPERILAQGTSRSLIGQSS 391
C E+I+ QGTS LIG SS
Sbjct: 56271 CYRAAAEQIIKQGTSGKLIGASS 56203
>NCR_G_C2.404 Ncr_G_C2.404
Length = 264766
Score = 27.6 bits (54), Expect = 9.7
Identities = 12/28 (42%), Positives = 15/28 (52%)
Frame = +2 / +3
Query: 131 TATSVVLSSLRIRPRTWQMANGTLTQIF 214
TA+ V LS+LRI T Q +T F
Sbjct: 158028 TASKVELSALRISDSTAQRTRAPVTVPF 158111
>NCR_G_C2.508 Ncr_G_C2.508
Length = 105197
Score = 27.6 bits (54), Expect = 9.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1 / -2
Query: 313 SIHCRARHREAMS*TPSPCHVASVRPR*LANQRSTCP 423
S+HC+ HR+ S + RPR L + CP
Sbjct: 28837 SLHCQHGHRQYREKNRSSDTTSDCRPRRLRGGKCCCP 28727
>NCR_G_C2.568 Ncr_G_C2.568
Length = 267169
Score = 27.6 bits (54), Expect = 9.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2 / +2
Query: 405 IGQSSWPHAGDMARTGSSTHSFPVSSTTMNA 313
I SS H G RT ST SFP + T A
Sbjct: 91943 IMSSSRTHCGKTTRTVPSTESFPDNQMTRRA 92035
>NCR_G_C2.066 Ncr_G_C2.066
Length = 117949
Score = 27.6 bits (54), Expect = 9.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1 / -2
Query: 502 CHPAI*LPMHLPHCPDSAP 558
CHPA P+ LP P AP
Sbjct: 99591 CHPAWHWPLSLPAWPPRAP 99535
>NCR_G_C2.742 Ncr_G_C2.742
Length = 80993
Score = 27.6 bits (54), Expect = 9.7
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1 / -3
Query: 427 PRDK*IVDWPIILAARWRHGKDW 359
P+++ I WP W HG W
Sbjct: 67962 PQEREITGWPENRCVHWNHGLGW 67894
>NCR_G_C2.356 Ncr_G_C2.356
Length = 40340
Score = 27.6 bits (54), Expect = 9.7
Identities = 11/21 (52%), Positives = 12/21 (56%)
Frame = +2 / -2
Query: 170 PRTWQMANGTLTQIFWLPLPL 232
PRTW + TL WLPL L
Sbjct: 25177 PRTWIASLPTLVLSLWLPLAL 25115
>NCR_G_C2.297 Ncr_G_C2.297
Length = 33278
Score = 27.6 bits (54), Expect = 9.7
Identities = 9/35 (25%), Positives = 17/35 (47%)
Frame = -1 / -1
Query: 394 ILAARWRHGKDWEFNS*LPCV*HDNECCLYLARIR 290
+L RWR + E L C+ + C++ ++R
Sbjct: 24140 LLMQRWREHNECEARPGLGCLVYSTSTCVHRRKLR 24036
>NCR_G_C2.215 Ncr_G_C2.215
Length = 79770
Score = 27.6 bits (54), Expect = 9.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2 / +1
Query: 377 PACGQDDWPINDLLVPWASIRSGNPGMQHLVRTWR 481
P CG ++ W++ RSG G V TWR
Sbjct: 70168 PGCGMSMRGRKPVVGEWSA*RSGGQGRWSSVLTWR 70272
>NCR_G_C2.059 Ncr_G_C2.059
Length = 89435
Score = 27.6 bits (54), Expect = 9.7
Identities = 11/28 (39%), Positives = 14/28 (49%)
Frame = +1 / -2
Query: 493 PTRCHPAI*LPMHLPHCPDSAPLVSTYC 576
P HP+ L +P CP LVS +C
Sbjct: 46447 PVHMHPSSHLSPTVPSCPWGGGLVSGFC 46364
>NCR_G_C2.428 Ncr_G_C2.428
Length = 2055
Score = 27.6 bits (54), Expect = 9.7
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = +3 / +2
Query: 204 RRSFGCHYLCTCSSSLKYGCN 266
R +FGC C CS YGC+
Sbjct: 779 RCNFGCSCGCGCSWGYGYGCS 841
>NCR_G_C2.135 Ncr_G_C2.135
Length = 65371
Score = 23.5 bits (45), Expect(2) = 9.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / +1
Query: 337 CV*HDNECCL 308
CV* NECCL
Sbjct: 14950 CV*RRNECCL 14979
Score = 21.7 bits (41), Expect(2) = 9.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3 / +2
Query: 203 LKFHSPFARFSAVSSR 156
L FH PFA +S R
Sbjct: 14981 LSFHQPFA*IKFISDR 15028
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 62220584
Number of Sequences: 995
Number of extensions: 1033890
Number of successful extensions: 56414
Number of sequences better than 10.0: 61
length of query: 192
length of database: 12,656,439
effective HSP length: 47
effective length of query: 144
effective length of database: 12,609,674
effective search space: 1815793056
effective search space used: 1815793056
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 54 (27.6 bits)