TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1612_B04_D0
8ZT.seq
(394 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.033 Ncr_G_C2.033 83 8e-25
NCR_G_C2.452 Ncr_G_C2.452 45 5e-05
NCR_G_C2.441 Ncr_G_C2.441 44 6e-05
NCR_G_C2.219 Ncr_G_C2.219 35 0.026
NCR_G_C2.089 Ncr_G_C2.089 32 0.33
NCR_G_C2.803 Ncr_G_C2.803 31 0.45
NCR_G_C2.347 Ncr_G_C2.347 31 0.45
NCR_G_C2.298 Ncr_G_C2.298 31 0.62
NCR_G_C2.295 Ncr_G_C2.295 31 0.62
NCR_G_C2.440 Ncr_G_C2.440 31 0.62
NCR_G_C2.082 Ncr_G_C2.082 29 1.1
NCR_G_C2.148 Ncr_G_C2.148 30 1.2
NCR_G_C2.668 Ncr_G_C2.668 30 1.2
NCR_G_C2.671 Ncr_G_C2.671 29 1.6
NCR_G_C2.309 Ncr_G_C2.309 29 1.6
NCR_G_C2.214 Ncr_G_C2.214 29 1.6
NCR_G_C2.681 Ncr_G_C2.681 29 1.6
NCR_G_C2.225 Ncr_G_C2.225 29 2.2
NCR_G_C2.565 Ncr_G_C2.565 29 2.2
NCR_G_C2.775 Ncr_G_C2.775 29 2.2
NCR_G_C2.238 Ncr_G_C2.238 29 2.2
NCR_G_C2.320 Ncr_G_C2.320 29 3.1
NCR_G_C2.133 Ncr_G_C2.133 29 3.1
NCR_G_C2.896 Ncr_G_C2.896 29 3.1
NCR_G_C2.653 Ncr_G_C2.653 29 3.1
NCR_G_C2.206 Ncr_G_C2.206 29 3.1
NCR_G_C2.825 Ncr_G_C2.825 29 3.1
NCR_G_C2.445 Ncr_G_C2.445 29 3.1
NCR_G_C2.564 Ncr_G_C2.564 29 3.1
NCR_G_C2.208 Ncr_G_C2.208 25 3.1
NCR_G_C2.169 Ncr_G_C2.169 24 3.6
NCR_G_C2.230 Ncr_G_C2.230 25 4.1
NCR_G_C2.107 Ncr_G_C2.107 28 4.2
NCR_G_C2.732 Ncr_G_C2.732 28 4.2
NCR_G_C2.073 Ncr_G_C2.073 28 4.2
NCR_G_C2.717 Ncr_G_C2.717 28 4.2
NCR_G_C2.259 Ncr_G_C2.259 28 4.2
NCR_G_C2.585 Ncr_G_C2.585 28 4.2
NCR_G_C2.220 Ncr_G_C2.220 28 5.8
NCR_G_C2.111 Ncr_G_C2.111 28 5.8
NCR_G_C2.261 Ncr_G_C2.261 28 5.8
NCR_G_C2.646 Ncr_G_C2.646 28 5.8
NCR_G_C2.580 Ncr_G_C2.580 28 5.8
NCR_G_C2.706 Ncr_G_C2.706 28 5.8
NCR_G_C2.059 Ncr_G_C2.059 28 5.8
NCR_G_C2.624 Ncr_G_C2.624 23 7.5
NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G... 27 7.7
NCR_G_C2.529 Ncr_G_C2.529 26 7.8
NCR_G_C2.213 Ncr_G_C2.213 27 7.9
NCR_G_C2.505 Ncr_G_C2.505 27 7.9
NCR_G_C2.247 Ncr_G_C2.247 27 7.9
NCR_G_C2.076 Ncr_G_C2.076 27 7.9
NCR_G_C2.246 Ncr_G_C2.246 27 7.9
NCR_G_C2.563 Ncr_G_C2.563 27 7.9
NCR_G_C2.633 Ncr_G_C2.633 27 7.9
NCR_G_C2.236 Ncr_G_C2.236 27 7.9
NCR_G_C2.438 Ncr_G_C2.438 27 7.9
NCR_G_C2.342 Ncr_G_C2.342 27 7.9
NCR_G_C2.097 Ncr_G_C2.097 27 7.9
NCR_G_C2.016 Ncr_G_C2.016 27 7.9
NCR_G_C2.484 Ncr_G_C2.484 27 7.9
NCR_G_C2.022_6 Ncr_G_C2.022_6.seq Continuation (6 of 6) of Ncr_G... 26 8.8
NCR_G_C2.106 Ncr_G_C2.106 24 9.5
>NCR_G_C2.033 Ncr_G_C2.033
Length = 166617
Score = 82.6 bits (174), Expect(3) = 8e-25
Identities = 32/37 (86%), Positives = 36/37 (96%)
Frame = +3 / +1
Query: 57 APVALDIKSPMDLVYELFSKLGLRYICVLKDGRYAGM 167
APVALDI+SPMDLVYELF KLGLRYIC+L+DG+YAGM
Sbjct: 136774 APVALDIRSPMDLVYELFVKLGLRYICILRDGKYAGM 136884
Score = 52.8 bits (109), Expect(2) = 2e-12
Identities = 24/37 (64%), Positives = 28/37 (74%)
Frame = -1 / -2
Query: 166 IPAYLPSLSTQI*RSPSFENNS*TKSIGDLISSATGA 56
+PAYLPSL Q+ SP+ +S*TKSIGD IS ATGA
Sbjct: 136883 MPAYLPSLKIQMYLSPNLTKSS*TKSIGDRISKATGA 136773
Score = 36.3 bits (73), Expect(2) = 2e-12
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1 / -3
Query: 217 SCFSCSRIYLTKVFLCV 167
SC S SRIYLTKVFLCV
Sbjct: 137014 SCSSNSRIYLTKVFLCV 136964
Score = 35.4 bits (71), Expect = 0.026
Identities = 15/37 (40%), Positives = 23/37 (61%)
Frame = -3 / -1
Query: 167 HSSISAIFEHADITESQF*EQLINQVHRRLDIQRNGC 57
H+S+ A+ + D+ Q E+L++QVHR DIQ C
Sbjct: 136884 HASVLAVS*NTDVP*PQLDEKLVDQVHRGSDIQSYWC 136774
Score = 34.5 bits (69), Expect(3) = 8e-25
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 3 DEDDESHDPTDFTPYIDPAPV 65
+E DPTDFTPYIDP +
Sbjct: 136646 EEGGGRRDPTDFTPYIDPVRI 136708
Score = 33.6 bits (67), Expect(3) = 8e-25
Identities = 12/17 (70%), Positives = 15/17 (87%)
Frame = +3 / +3
Query: 168 THKKTFVRYMREHEKHD 218
THKKTFV+YMRE E+ +
Sbjct: 136965 THKKTFVKYMRELEEQE 137015
Score = 32.2 bits (64), Expect(2) = 0.078
Identities = 11/21 (52%), Positives = 12/21 (56%)
Frame = +1 / +2
Query: 58 HPLRWISSRLWTWFMSCSQNW 120
H WIS LWTW S S +W
Sbjct: 136775 HQ*LWISDPLWTWSTSFSSSW 136837
Score = 19.8 bits (37), Expect(2) = 0.078
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 167 DTQEDFC*IY 196
DT ED C +Y
Sbjct: 136964 DT*EDLCQVY 136993
>NCR_G_C2.452 Ncr_G_C2.452
Length = 120796
Score = 44.6 bits (91), Expect = 5e-05
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3 / -1
Query: 33 DFTPYIDPAPVALDIKSPMDLVYELFSKLGLRYICVLKDGRYAGMTHKKTFVRY 194
+F+ Y+D PV+ + P++ V ELF K+G R I + G+ G+ K ++Y
Sbjct: 10942 NFSRYVDTTPVSAHPRLPLETVMELFRKIGPRVILIEYHGKLMGLVTVKDCLKY 10781
>NCR_G_C2.441 Ncr_G_C2.441
Length = 223615
Score = 44.1 bits (90), Expect = 6e-05
Identities = 19/60 (31%), Positives = 30/60 (49%)
Frame = +3 / +2
Query: 33 DFTPYIDPAPVALDIKSPMDLVYELFSKLGLRYICVLKDGRYAGMTHKKTFVRYMREHEK 212
D P++D P+ L +SP+ L F KLG+RY+ + G G+ +K M E+
Sbjct: 114809 DLRPWMDQTPLTLPGRSPLHLAVSYFQKLGVRYVLFAERGVLQGLLTRKDVWHVMNGAEE 114988
>NCR_G_C2.219 Ncr_G_C2.219
Length = 282514
Score = 35.4 bits (71), Expect = 0.026
Identities = 16/43 (37%), Positives = 22/43 (50%)
Frame = +3 / -3
Query: 60 PVALDIKSPMDLVYELFSKLGLRYICVLKDGRYAGMTHKKTFV 188
PV+ +K + ++ F GL YICV DGR G +K V
Sbjct: 240593 PVSQTVKKTFAVDFQSFVAAGLGYICVTVDGRGTGFIGRKNRV 240465
>NCR_G_C2.089 Ncr_G_C2.089
Length = 57515
Score = 31.8 bits (63), Expect = 0.33
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1 / +3
Query: 46 ISILHPLRWISSRLWTWFMSCSQNW 120
+S+L +RWIS +W SCS +W
Sbjct: 15993 VSLLPFVRWISRSMWRSTESCSYSW 16067
>NCR_G_C2.803 Ncr_G_C2.803
Length = 35118
Score = 31.3 bits (62), Expect = 0.45
Identities = 14/44 (31%), Positives = 20/44 (44%)
Frame = -2 / +3
Query: 348 VTSTLPDAIPKEKHAVTNVMPMQCPNHQINAHHAQNTLLLNDLN 217
V +T PDA KH T M P+H I ++ ++ LN
Sbjct: 19296 VGATPPDASKLTKHGTTTTRKMGSPSHPIRTEYSSRGRRISGLN 19427
>NCR_G_C2.347 Ncr_G_C2.347
Length = 20091
Score = 31.3 bits (62), Expect = 0.45
Identities = 15/47 (31%), Positives = 21/47 (43%)
Frame = -1 / +2
Query: 334 TRCHTQRKTRCYQCNANAVPEPSNQCSPCPKHLVA*RP*SCFSCSRI 194
T C R T C C+ N + + + S CP LVA P +C +
Sbjct: 5771 TSCSIHRCTCC*CCSENCCSDSAARPSRCPYPLVATGPYRAIACRNV 5911
>NCR_G_C2.298 Ncr_G_C2.298
Length = 253576
Score = 30.8 bits (61), Expect = 0.62
Identities = 13/30 (43%), Positives = 15/30 (49%)
Frame = -1 / +2
Query: 334 TRCHTQRKTRCYQCNANAVPEPSNQCSPCP 245
TR T TRC C + P S+ CSP P
Sbjct: 146327 TRTSTSEATRCASCASCGRPNFSSLCSPQP 146416
>NCR_G_C2.295 Ncr_G_C2.295
Length = 73468
Score = 30.8 bits (61), Expect = 0.62
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1 / -3
Query: 346 HVNVTRCHTQRKTRCYQCNANAVPEPSNQCSPC 248
H V RC T+ + R Y+C+ + P PS C
Sbjct: 71678 HQPVPRCQTRPRHRTYRCHTGSRPCPSRPRRRC 71580
Score = 23.5 bits (45), Expect(2) = 8.2
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 370 THQLRQSSHVNVTRC 326
TH ++Q +HV+ R
Sbjct: 60891 THAVQQRAHVSAARA 60935
Score = 21.2 bits (40), Expect(2) = 8.2
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -1 / +2
Query: 331 RCHTQRKTRCYQCNANAVPEPSNQCSPCP 245
RC R+TRC+ A P + S P
Sbjct: 60947 RCPPLRQTRCWSRPPAAQPGTHHSRSSTP 61033
>NCR_G_C2.440 Ncr_G_C2.440
Length = 156136
Score = 30.8 bits (61), Expect = 0.62
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1 / +2
Query: 88 WTWFMSCSQNWDSVISACSKMADML 162
W W + NWDS+ ++CS +A+ +
Sbjct: 98078 WLWPFGVACNWDSLNNSCSTVAESI 98152
>NCR_G_C2.082 Ncr_G_C2.082
Length = 85760
Score = 28.6 bits (56), Expect(2) = 1.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1 / -1
Query: 214 CFSCSRIYLTKVFLCVIPAYLPSL 143
C +R++ + F ++PA++PSL
Sbjct: 25082 CHCTTRLFRIRTFCLILPAFIPSL 25011
Score = 28.1 bits (55), Expect = 4.2
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2 / -1
Query: 342 STLPDAIPKEKHAVTNVMPMQCPNHQINAH 253
S P A+P +H+ P NH+ N H
Sbjct: 26894 SVPPSALPSARHSEEGPTPAPAANHRRNVH 26805
Score = 19.4 bits (36), Expect(2) = 1.1
Identities = 4/15 (26%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 370 THQLRQSSHVNVTRC 326
+H+L + + +N+ C
Sbjct: 25124 SHKLTRLTFLNLIHC 25080
>NCR_G_C2.148 Ncr_G_C2.148
Length = 98105
Score = 29.9 bits (59), Expect = 1.2
Identities = 13/43 (30%), Positives = 22/43 (50%)
Frame = -1 / +2
Query: 361 LRQSSHVNVTRCHTQRKTRCYQCNANAVPEPSNQCSPCPKHLV 233
LRQ ++ + H +R+ R + V S+ PCP+HL+
Sbjct: 60905 LRQPHPQDLDQLHARRRLRRHGRRCLLVLHRSHHVPPCPRHLL 61033
>NCR_G_C2.668 Ncr_G_C2.668
Length = 78107
Score = 29.9 bits (59), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 294 VMPMQCPNHQINAHHAQNTLLLNDLNHASH 205
++P NH++N HH T LL +H+ H
Sbjct: 6430 ILPPSPRNHKLNLHHQPKTNLLPLHHHSRH 6341
>NCR_G_C2.671 Ncr_G_C2.671
Length = 4503
Score = 29.5 bits (58), Expect = 1.6
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1 / +2
Query: 346 HVNVTRCHTQRKTRCYQCNANAVPEPSNQCSP 251
H N T+C R RC P + CSP
Sbjct: 2171 HDNATQCR*HRHGRCQSSRT*TTPRENPDCSP 2266
>NCR_G_C2.309 Ncr_G_C2.309
Length = 70740
Score = 29.5 bits (58), Expect = 1.6
Identities = 11/38 (28%), Positives = 21/38 (54%)
Frame = +3 / +2
Query: 75 IKSPMDLVYELFSKLGLRYICVLKDGRYAGMTHKKTFV 188
+ SP+DL ++ ++ GLR++C + H +FV
Sbjct: 248 VSSPLDLRPKMGNRTGLRFLCSFFFSPLSAQAHPDSFV 361
>NCR_G_C2.214 Ncr_G_C2.214
Length = 116813
Score = 29.5 bits (58), Expect = 1.6
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -2 / +3
Query: 360 CVNQVTSTLPDAIPKEKHAVTNVMPMQCPNHQINAHHAQNTL 235
C+ LP A+P + +P P+ QI H +TL
Sbjct: 37194 CMQTAAGPLPFAVPSRSSSSCRAVPSTGPHAQIED*HPVSTL 37319
Score = 29.0 bits (57), Expect = 2.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3 / +1
Query: 9 DDESHDPTDFTPYIDPAPVALDIKS 83
D + HD +F+P++ P P+ L I+S
Sbjct: 56350 DAKKHDIYNFSPHVRPIPLELHIQS 56424
Score = 27.2 bits (53), Expect = 7.9
Identities = 12/27 (44%), Positives = 13/27 (47%)
Frame = +3 / +2
Query: 12 DESHDPTDFTPYIDPAPVALDIKSPMD 92
D T TPYI PVA+D P D
Sbjct: 38330 DRDSSSTSSTPYIHLHPVAVDALFPTD 38410
>NCR_G_C2.681 Ncr_G_C2.681
Length = 124507
Score = 29.5 bits (58), Expect = 1.6
Identities = 15/35 (42%), Positives = 17/35 (47%)
Frame = +3 / -2
Query: 105 LFSKLGLRYICVLKDGRYAGMTHKKTFVRYMREHE 209
LF L LRY C + R G TH Y+R HE
Sbjct: 981 LFGGLRLRYECEREKERGWGFTHGT*MDHYLRLHE 877
>NCR_G_C2.225 Ncr_G_C2.225
Length = 107875
Score = 29.0 bits (57), Expect = 2.2
Identities = 14/47 (29%), Positives = 19/47 (39%)
Frame = -1 / +2
Query: 373 PTHQLRQSSHVNVTRCHTQRKTRCYQCNANAVPEPSNQCSPCPKHLV 233
PTH L + H+ R+ ++ P PS Q P P H V
Sbjct: 95105 PTHSLAHFLASDNHNSHSSRRRPLHRQPVRRPPSPSIQLHPLPPHRV 95245
>NCR_G_C2.565 Ncr_G_C2.565
Length = 82225
Score = 29.0 bits (57), Expect = 2.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 1 STKTTNPTTPRISRHISILHPL 66
+T T +P T ++RH S+LHP+
Sbjct: 36691 TTVTQHPDTSFVARHQSLLHPI 36756
>NCR_G_C2.775 Ncr_G_C2.775
Length = 60236
Score = 29.0 bits (57), Expect = 2.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2 / +2
Query: 312 KHAVTNVMPMQCPNHQINAHHAQNTLLLNDLNHASHALAY 193
KH + + P C NH+ ++H Q + L +H LA+
Sbjct: 15374 KHPIVSNSPPPCSNHRPSSHSEQLDHFQDFLAFLTHVLAH 15493
>NCR_G_C2.238 Ncr_G_C2.238
Length = 254242
Score = 29.0 bits (57), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (54%)
Frame = -1 / -1
Query: 334 TRCHTQRKTRCYQCNANAVPEPSNQCS 254
T CH+ T QC+ +A P N+CS
Sbjct: 63631 TMCHSHVGTPLGQCHLDASGTPRNECS 63551
Score = 28.1 bits (55), Expect = 4.2
Identities = 11/45 (24%), Positives = 19/45 (41%)
Frame = -1 / +3
Query: 379 LLPTHQLRQSSHVNVTRCHTQRKTRCYQCNANAVPEPSNQCSPCP 245
L+P L + + C T R + C +C A++ + CP
Sbjct: 175836 LVPVPLLNTDPKLFIVSCQTDRHSNCPRCRAHSSVSRRRS*AACP 175970
>NCR_G_C2.320 Ncr_G_C2.320
Length = 80443
Score = 28.6 bits (56), Expect = 3.1
Identities = 10/29 (34%), Positives = 14/29 (47%)
Frame = -1 / -3
Query: 331 RCHTQRKTRCYQCNANAVPEPSNQCSPCP 245
+ HT K C++CN + S PCP
Sbjct: 61871 KLHTGAKLLCFRCNHKS*RHDSCPALPCP 61785
>NCR_G_C2.133 Ncr_G_C2.133
Length = 61891
Score = 28.6 bits (56), Expect = 3.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1 / -3
Query: 85 LWTWFMSCSQNWDSVISACS 144
+WTW +S W S++ AC+
Sbjct: 39872 MWTWSLSSYMKWRSLMWACA 39813
Score = 28.1 bits (55), Expect = 4.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2 / +3
Query: 221 RSLSNKVFWAW*ALI*WFGHCIGITLVTACFSL 319
+ L +F AW* *WFG I CF L
Sbjct: 28395 KHLPQLLFSAW*RST*WFGDSTRILWARQCFQL 28493
>NCR_G_C2.896 Ncr_G_C2.896
Length = 25814
Score = 28.6 bits (56), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2 / -3
Query: 245 WAW*ALI*WFGHCIGITLVTAC 310
WAW + W CIGI+ T C
Sbjct: 13362 WAWYSRGRWISFCIGISSCTNC 13297
>NCR_G_C2.653 Ncr_G_C2.653
Length = 89660
Score = 28.6 bits (56), Expect = 3.1
Identities = 10/18 (55%), Positives = 11/18 (60%)
Frame = +3 / +3
Query: 6 EDDESHDPTDFTPYIDPA 59
EDD+ DP DF P PA
Sbjct: 35292 EDDDDSDPFDFEPSDLPA 35345
>NCR_G_C2.206 Ncr_G_C2.206
Length = 43396
Score = 28.6 bits (56), Expect = 3.1
Identities = 8/30 (26%), Positives = 22/30 (72%)
Frame = +1 / -1
Query: 13 TNPTTPRISRHISILHPLRWISSRLWTWFM 102
T+P + ++ ++ +H LR++S+++ +WF+
Sbjct: 1654 TSPLSAM*TKCLTAIHALRYLSNQVGSWFL 1565
>NCR_G_C2.825 Ncr_G_C2.825
Length = 52585
Score = 28.6 bits (56), Expect = 3.1
Identities = 9/26 (34%), Positives = 19/26 (72%)
Frame = -1 / -3
Query: 178 FLCVIPAYLPSLSTQI*RSPSFENNS 101
FL V+PA+ P+++T + +P F +++
Sbjct: 47612 FLLVLPAFPPTMNTTVHTTPQFSHDN 47535
>NCR_G_C2.445 Ncr_G_C2.445
Length = 167464
Score = 28.6 bits (56), Expect = 3.1
Identities = 14/36 (38%), Positives = 17/36 (46%)
Frame = -1 / -3
Query: 325 HTQRKTRCYQCNANAVPEPSNQCSPCPKHLVA*RP* 218
+T R C+QC P P QC P+ A* P*
Sbjct: 83678 YTVRLRSCHQCPWPMTPPPGRQCECMPQAP*A*LP* 83571
>NCR_G_C2.564 Ncr_G_C2.564
Length = 150940
Score = 28.6 bits (56), Expect = 3.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 303 VTNVMPMQCPNHQINAHH 250
VTN +P CP H + AH+
Sbjct: 20807 VTNQLPSSCPPHLLKAHN 20754
Score = 28.1 bits (55), Expect = 4.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2 / -1
Query: 38 HAIYRSCTRCAGYQVAYGLG 97
HA+Y SCT C + A G
Sbjct: 77914 HALYSSCTHCTTHHAAVAAG 77855
Score = 27.6 bits (54), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1 / +2
Query: 301 YQCNANAVPEPSNQCS 254
Y CN +A+P PS +C+
Sbjct: 1679 YDCNVDALPSPSLRCA 1726
>NCR_G_C2.208 Ncr_G_C2.208
Length = 202230
Score = 24.9 bits (48), Expect(2) = 3.1
Identities = 9/22 (40%), Positives = 13/22 (58%)
Frame = -3 / -2
Query: 302 LPM*CQCSARTIKSMLTMPKTP 237
L M*CQC + + ++T K P
Sbjct: 39518 LSM*CQCCTVSFRRLVTKSKPP 39453
Score = 21.2 bits (40), Expect(2) = 3.1
Identities = 12/29 (41%), Positives = 14/29 (47%)
Frame = -1 / -3
Query: 223 P*SCFSCSRIYLTKVFLCVIPAYLPSLST 137
P C S I+ T L V PA SLS+
Sbjct: 39454 PTMCLSFRNIFATSSILEVQPAIA*SLSS 39368
>NCR_G_C2.169 Ncr_G_C2.169
Length = 54533
Score = 24.4 bits (47), Expect(2) = 3.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 1 STKTTNPTTPRISRH 45
S T+NP PR+S+H
Sbjct: 28213 SINTSNPLWPRVSQH 28257
Score = 21.7 bits (41), Expect(2) = 3.6
Identities = 4/21 (19%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 94 WFMSCSQNWDSVISACSKMAD 156
W ++ +++W ++S C +++
Sbjct: 28322 WVLTRARSWPFLVSTCLSLSE 28384
>NCR_G_C2.230 Ncr_G_C2.230
Length = 223934
Score = 25.3 bits (49), Expect(2) = 4.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +2
Query: 1 STKTTNPTTPRISRHI 48
S+ T+ P TPR S HI
Sbjct: 139298 SSATSRPATPRASTHI 139345
Score = 20.3 bits (38), Expect(2) = 4.1
Identities = 5/16 (31%), Positives = 9/16 (56%)
Frame = +1 / +1
Query: 73 ISSRLWTWFMSCSQNW 120
I++ + WF+S W
Sbjct: 139333 INAHCFPWFLSLLDKW 139380
>NCR_G_C2.107 Ncr_G_C2.107
Length = 97891
Score = 28.1 bits (55), Expect = 4.2
Identities = 7/15 (46%), Positives = 9/15 (59%)
Frame = +2 / -2
Query: 137 RAQRWQICWNDTQED 181
R RW +CW DT +
Sbjct: 93969 RVNRWLVCWEDTSSE 93925
>NCR_G_C2.732 Ncr_G_C2.732
Length = 42948
Score = 28.1 bits (55), Expect = 4.2
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = -1 / +1
Query: 310 TRCYQCNANAVPEPSNQCSPCP 245
TRC + +P P + SPCP
Sbjct: 27784 TRCQNQVIHCIPSPCSSSSPCP 27849
>NCR_G_C2.073 Ncr_G_C2.073
Length = 94453
Score = 28.1 bits (55), Expect = 4.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1 / +1
Query: 331 RCHTQRKTRCYQCNANAVPEPSNQCSPCPK 242
RC Q K QC A+ + P+ SP PK
Sbjct: 7357 RCSFQGKAASAQCAASKIELPTWPASPSPK 7446
>NCR_G_C2.717 Ncr_G_C2.717
Length = 57937
Score = 28.1 bits (55), Expect = 4.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 107 VLKTGTPLYLRAQRWQICWNDTQED 181
+L+ GTP +R +RWQ ++ T D
Sbjct: 44917 ILEAGTPSSVRDRRWQCHYSSTDLD 44991
>NCR_G_C2.259 Ncr_G_C2.259
Length = 185660
Score = 28.1 bits (55), Expect = 4.2
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1 / -3
Query: 70 WISSRLWTWFMSCSQNW 120
W+S +W W SC W
Sbjct: 82971 WMSMSIWDWSCSCPWGW 82921
>NCR_G_C2.585 Ncr_G_C2.585
Length = 245975
Score = 28.1 bits (55), Expect = 4.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 343 VNVTRCHTQRKTR 305
VN++ CH QR TR
Sbjct: 37553 VNLSTCHLQRHTR 37591
Score = 27.6 bits (54), Expect = 5.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1 / +1
Query: 16 NPTTPRISRHISILHPLRWISSRLWT 93
NPTT RI +S L L ++ WT
Sbjct: 49540 NPTTIRIGLCLSALENLARATATDWT 49617
>NCR_G_C2.220 Ncr_G_C2.220
Length = 142147
Score = 27.6 bits (54), Expect = 5.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / +1
Query: 34 ISRHISILHPLRWISSRLWT 93
I H +L PL+W+SS T
Sbjct: 117418 IQPHTYLLAPLQWLSSPAST 117477
>NCR_G_C2.111 Ncr_G_C2.111
Length = 322912
Score = 27.6 bits (54), Expect = 5.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1 / +1
Query: 49 SILHPLRWISSRLWTWFMSC 108
S+L L WI SR W W C
Sbjct: 141820 SML*MLSWIFSRTWLWIDGC 141879
>NCR_G_C2.261 Ncr_G_C2.261
Length = 69088
Score = 27.6 bits (54), Expect = 5.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1 / -1
Query: 370 THQLRQSSHVNVTRCHTQRKTRCYQCN 290
TH+ RQ H++ R QR+ C+Q +
Sbjct: 43738 THRHRQGRHLHRLRRQLQRRGHCHQAS 43658
>NCR_G_C2.646 Ncr_G_C2.646
Length = 41756
Score = 27.6 bits (54), Expect = 5.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1 / +1
Query: 331 RCHTQRKTRCYQCNANAVPEPSNQCSPCP 245
RC + + R +QC + + P ++C CP
Sbjct: 910 RCRSWKSGRVHQC*RSRLG*PRSRCRSCP 996
>NCR_G_C2.580 Ncr_G_C2.580
Length = 63172
Score = 27.6 bits (54), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1 / +1
Query: 367 HQLRQSSHVNVTRCHTQRKTRCYQCNA 287
H+ Q S TRCH + + RC++ A
Sbjct: 50959 HRQHQESEH*ETRCHRRHRRRCHESAA 51039
>NCR_G_C2.706 Ncr_G_C2.706
Length = 27623
Score = 27.6 bits (54), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (61%)
Frame = -2 / -1
Query: 294 VMPMQCPNHQINAHHAQNTLLLNDLNHAS 208
V+P+ + Q A H Q +LLL+D N +S
Sbjct: 22889 VLPLSF*SFQQTARHQQVSLLLSDANQSS 22803
>NCR_G_C2.059 Ncr_G_C2.059
Length = 89435
Score = 27.6 bits (54), Expect = 5.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 277 PEPSNQCSPCPKH 239
P PS QCSP P+H
Sbjct: 33719 PGPSPQCSPVPQH 33681
>NCR_G_C2.624 Ncr_G_C2.624
Length = 145122
Score = 23.1 bits (44), Expect(2) = 7.5
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = -2 / -3
Query: 324 IPKEKHAVTNVMPMQCPNHQINAHHAQNTLLL 229
+P H + ++ CP+H + H+Q T+ +
Sbjct: 36703 VPYLSHCLQSLPLP*CPHHPAVSCHSQGTICM 36608
Score = 21.7 bits (41), Expect(2) = 7.5
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3 / -3
Query: 344 RQRYPMPY 321
R+RYP+PY
Sbjct: 36718 RERYPVPY 36695
>NCR_G_C2.022_5 Ncr_G_C2.022_5.seq Continuation (5 of 6) of Ncr_G_C2.022
from base 400001
Length = 110000
Score = 27.2 bits (53), Expect = 7.9
Identities = 8/23 (34%), Positives = 13/23 (55%)
Frame = -2 / -3
Query: 309 HAVTNVMPMQCPNHQINAHHAQN 241
H + N PM+CP ++ N Q+
Sbjct: 32346 HHIVNAAPMKCPLNRSNTFDVQS 32278
Score = 25.8 bits (50), Expect(2) = 7.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1 / +2
Query: 199 RIYLTKVFLCVIPAYLPSL 143
R +LT + LC + YLP+L
Sbjct: 104627 RYHLTSIILCPLLRYLPTL 104683
Score = 18.9 bits (35), Expect(2) = 7.7
Identities = 6/14 (42%), Positives = 9/14 (63%)
Frame = -1 / +1
Query: 277 PEPSNQCSPCPKHL 236
P+P+ Q + P HL
Sbjct: 104602 PKPARQPTSIPPHL 104643
>NCR_G_C2.529 Ncr_G_C2.529
Length = 103305
Score = 25.8 bits (50), Expect(2) = 7.8
Identities = 7/16 (43%), Positives = 10/16 (61%)
Frame = +2 / -3
Query: 269 WFGHCIGITLVTACFS 316
WF CIG +T C++
Sbjct: 12349 WFDACIGYASITKCYT 12302
Score = 18.9 bits (35), Expect(2) = 7.8
Identities = 4/7 (57%), Positives = 6/7 (85%)
Frame = +2 / -3
Query: 230 SNKVFWA 250
+NKVF+
Sbjct: 12370 ANKVFYV 12350
>NCR_G_C2.213 Ncr_G_C2.213
Length = 33903
Score = 27.2 bits (53), Expect = 7.9
Identities = 11/36 (30%), Positives = 16/36 (43%)
Frame = -1 / -3
Query: 367 HQLRQSSHVNVTRCHTQRKTRCYQCNANAVPEPSNQ 260
H SS + RC + KTR + ++ P P Q
Sbjct: 11557 HPTTTSSRLTTRRCWLKSKTRAWIIRSHLTPRPQLQ 11450
>NCR_G_C2.505 Ncr_G_C2.505
Length = 24062
Score = 27.2 bits (53), Expect = 7.9
Identities = 11/32 (34%), Positives = 17/32 (52%)
Frame = +3 / +2
Query: 96 VYELFSKLGLRYICVLKDGRYAGMTHKKTFVR 191
++ + L L Y+CVL+ R G+T F R
Sbjct: 2975 IFSVKPGLALMYVCVLRVDRRNGLTVGSAFTR 3070
>NCR_G_C2.247 Ncr_G_C2.247
Length = 65635
Score = 27.2 bits (53), Expect = 7.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2 / -1
Query: 339 TLPDAIPKEKHAVTNVMPMQCPNHQ 265
TLP P +H V N CP H+
Sbjct: 60136 TLPRVSPSWEHHVNNAAFQNCPKHR 60062
>NCR_G_C2.076 Ncr_G_C2.076
Length = 241344
Score = 27.2 bits (53), Expect = 7.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3 / +3
Query: 341 QRYPMPYPKKNTLLPM*CQCSARTIKSMLTM 249
QRYP P + P C C + ++S+ +M
Sbjct: 113547 QRYPPSVPHETASSPCDCACKSAHLESVTSM 113639
Score = 27.2 bits (53), Expect = 7.9
Identities = 15/45 (33%), Positives = 18/45 (39%)
Frame = -1 / +1
Query: 385 LALLPTHQLRQSSHVNVTRCHTQRKTRCYQCNANAVPEPSNQCSP 251
L LLP L + V R H + +C A P PSN P
Sbjct: 133396 LLLLPQISLHLAYSVCPWRLHLPNRALLIRC*APVPPRPSNNLLP 133530
>NCR_G_C2.246 Ncr_G_C2.246
Length = 86567
Score = 27.2 bits (53), Expect = 7.9
Identities = 10/16 (62%), Positives = 13/16 (80%)
Frame = -1 / -3
Query: 94 KSIGDLISSATGAGSI 47
+ +GDLISS TGA S+
Sbjct: 1545 RPVGDLISSRTGAASV 1498
>NCR_G_C2.563 Ncr_G_C2.563
Length = 28777
Score = 27.2 bits (53), Expect = 7.9
Identities = 11/29 (37%), Positives = 15/29 (50%)
Frame = +1 / -1
Query: 4 TKTTNPTTPRISRHISILHPLRWISSRLW 90
T+ T T+PR+ R RWI S+ W
Sbjct: 14146 TRNTASTSPRLCREEKQGAEQRWIRSKCW 14060
>NCR_G_C2.633 Ncr_G_C2.633
Length = 56076
Score = 27.2 bits (53), Expect = 7.9
Identities = 7/18 (38%), Positives = 14/18 (76%)
Frame = +1 / +2
Query: 88 WTWFMSCSQNWDSVISAC 141
W+W ++ S + +++ISAC
Sbjct: 53993 WSWVLAASSSGENLISAC 54046
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 27.2 bits (53), Expect = 7.9
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 217 SCFSCSRIYLTKVFLCV 167
+C C R++L +V+ CV
Sbjct: 11975 ACQRCGRVWLAEVYACV 11925
>NCR_G_C2.438 Ncr_G_C2.438
Length = 62276
Score = 27.2 bits (53), Expect = 7.9
Identities = 10/19 (52%), Positives = 12/19 (62%)
Frame = +1 / -2
Query: 7 KTTNPTTPRISRHISILHP 63
+T PTTPRI R +HP
Sbjct: 29395 QTQTPTTPRIKRSTPKVHP 29339
>NCR_G_C2.342 Ncr_G_C2.342
Length = 52841
Score = 27.2 bits (53), Expect = 7.9
Identities = 11/34 (32%), Positives = 17/34 (49%)
Frame = -1 / +1
Query: 358 RQSSHVNVTRCHTQRKTRCYQCNANAVPEPSNQC 257
R +SHV +C Q K++C + P S +C
Sbjct: 31675 RGTSHVQPAQCIRQGKSKCDLTAPSLRPS*STRC 31776
>NCR_G_C2.097 Ncr_G_C2.097
Length = 78242
Score = 27.2 bits (53), Expect = 7.9
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2 / +1
Query: 74 YQVAYGLGL*VVLKTGTPLYLRAQR 148
Y + G+ L +K GT LY+ R
Sbjct: 55531 YLIYLGVSLIPTMKVGTVLYMSRSR 55605
>NCR_G_C2.016 Ncr_G_C2.016
Length = 8245
Score = 27.2 bits (53), Expect = 7.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1 / +3
Query: 214 CFSCSRIYLTKVFLCVIPAYLPSLST 137
CF C +Y + F ++ + LPSL T
Sbjct: 8127 CFGCMFVYY*RKFPSIVVSELPSLRT 8204
>NCR_G_C2.484 Ncr_G_C2.484
Length = 36421
Score = 27.2 bits (53), Expect = 7.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 238 GVLGMVSIDLMVRALHWHYI 297
G +GMV +DL++ HW+ +
Sbjct: 5350 GGVGMVGLDLLIVFFHWNVV 5291
>NCR_G_C2.022_6 Ncr_G_C2.022_6.seq Continuation (6 of 6) of
Ncr_G_C2.022 from base 500001
Length = 38348
Score = 25.8 bits (50), Expect(2) = 8.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1 / +1
Query: 199 RIYLTKVFLCVIPAYLPSL 143
R +LT + LC + YLP+L
Sbjct: 4627 RYHLTSIILCPLLRYLPTL 4683
Score = 18.9 bits (35), Expect(2) = 8.8
Identities = 6/14 (42%), Positives = 9/14 (63%)
Frame = -1 / +3
Query: 277 PEPSNQCSPCPKHL 236
P+P+ Q + P HL
Sbjct: 4602 PKPARQPTSIPPHL 4643
>NCR_G_C2.106 Ncr_G_C2.106
Length = 177512
Score = 23.5 bits (45), Expect(2) = 9.5
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2 / +3
Query: 47 YRSCTRCAGYQV 82
Y C RC GY++
Sbjct: 149904 YTGCLRCCGYRI 149939
Score = 20.8 bits (39), Expect(2) = 9.5
Identities = 6/20 (30%), Positives = 8/20 (40%)
Frame = +1 / +3
Query: 82 RLWTWFMSCSQNWDSVISAC 141
RLW W + +I C
Sbjct: 149940 RLWWWCCGVTHGSHRLIGVC 149999
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 40394502
Number of Sequences: 995
Number of extensions: 652901
Number of successful extensions: 38659
Number of sequences better than 10.0: 63
length of query: 131
length of database: 12,656,439
effective HSP length: 44
effective length of query: 86
effective length of database: 12,612,659
effective search space: 1084688674
effective search space used: 1084688674
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 52 (26.7 bits)