TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNCT3P/stackpack/blast_NCR/FgrNCT3P_1612_C11_F2
2ZT.seq
(210 letters)
Database: /phillip/Ncr/Ncr_G
995 sequences; 37,969,317 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
NCR_G_C2.523 Ncr_G_C2.523 32 0.10
NCR_G_C2.418 Ncr_G_C2.418 27 0.13
NCR_G_C2.668 Ncr_G_C2.668 29 0.51
NCR_G_C2.592 Ncr_G_C2.592 29 0.96
NCR_G_C2.380 Ncr_G_C2.380 29 0.96
NCR_G_C2.357 Ncr_G_C2.357 29 0.96
NCR_G_C2.125 Ncr_G_C2.125 29 0.96
NCR_G_C2.223 Ncr_G_C2.223 26 1.8
NCR_G_C2.309 Ncr_G_C2.309 28 1.8
NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of Ncr_G... 28 1.8
NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G... 28 1.8
NCR_G_C2.621 Ncr_G_C2.621 28 1.8
NCR_G_C2.128 Ncr_G_C2.128 27 2.5
NCR_G_C2.436 Ncr_G_C2.436 27 2.5
NCR_G_C2.197 Ncr_G_C2.197 27 2.5
NCR_G_C2.569 Ncr_G_C2.569 27 3.4
NCR_G_C2.568 Ncr_G_C2.568 27 3.4
NCR_G_C2.701 Ncr_G_C2.701 27 3.4
NCR_G_C2.191 Ncr_G_C2.191 27 3.4
NCR_G_C2.430 Ncr_G_C2.430 27 3.4
NCR_G_C2.017 Ncr_G_C2.017 26 4.7
NCR_G_C2.236 Ncr_G_C2.236 26 4.7
NCR_G_C2.446 Ncr_G_C2.446 26 4.7
NCR_G_C2.437 Ncr_G_C2.437 26 4.7
NCR_G_C2.112 Ncr_G_C2.112 26 4.7
NCR_G_C2.034 Ncr_G_C2.034 26 4.7
NCR_G_C2.582 Ncr_G_C2.582 26 4.7
NCR_G_C2.064 Ncr_G_C2.064 26 4.7
NCR_G_C2.585 Ncr_G_C2.585 26 4.7
NCR_G_C2.059 Ncr_G_C2.059 26 4.7
NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of Ncr_G... 26 4.7
NCR_G_C2.894 Ncr_G_C2.894 26 4.7
NCR_G_C2.242 Ncr_G_C2.242 26 4.7
NCR_G_C2.521 Ncr_G_C2.521 26 4.7
NCR_G_C2.540 Ncr_G_C2.540 26 4.7
NCR_G_C2.164 Ncr_G_C2.164 26 4.7
NCR_G_C2.481 Ncr_G_C2.481 26 6.5
NCR_G_C2.762 Ncr_G_C2.762 26 6.5
NCR_G_C2.246 Ncr_G_C2.246 26 6.5
NCR_G_C2.069 Ncr_G_C2.069 26 6.5
NCR_G_C2.220 Ncr_G_C2.220 26 6.5
NCR_G_C2.055 Ncr_G_C2.055 26 6.5
NCR_G_C2.009 Ncr_G_C2.009 26 6.5
NCR_G_C2.111 Ncr_G_C2.111 26 6.5
NCR_G_C2.299 Ncr_G_C2.299 26 6.5
NCR_G_C2.202 Ncr_G_C2.202 26 6.5
NCR_G_C2.359 Ncr_G_C2.359 26 6.5
NCR_G_C2.163 Ncr_G_C2.163 26 6.5
NCR_G_C2.303 Ncr_G_C2.303 26 6.5
NCR_G_C2.439 Ncr_G_C2.439 26 6.5
NCR_G_C2.353 Ncr_G_C2.353 25 8.9
NCR_G_C2.235 Ncr_G_C2.235 25 8.9
NCR_G_C2.727 Ncr_G_C2.727 25 8.9
NCR_G_C2.459 Ncr_G_C2.459 25 8.9
NCR_G_C2.379 Ncr_G_C2.379 25 8.9
NCR_G_C2.574 Ncr_G_C2.574 25 8.9
NCR_G_C2.848 Ncr_G_C2.848 25 8.9
NCR_G_C2.322 Ncr_G_C2.322 25 8.9
NCR_G_C2.259 Ncr_G_C2.259 25 8.9
NCR_G_C2.218 Ncr_G_C2.218 25 8.9
NCR_G_C2.116 Ncr_G_C2.116 25 8.9
NCR_G_C2.423 Ncr_G_C2.423 25 8.9
NCR_G_C2.403 Ncr_G_C2.403 25 8.9
NCR_G_C2.622 Ncr_G_C2.622 25 8.9
NCR_G_C2.404 Ncr_G_C2.404 25 8.9
NCR_G_C2.271 Ncr_G_C2.271 25 8.9
NCR_G_C2.195 Ncr_G_C2.195 25 8.9
NCR_G_C2.398 Ncr_G_C2.398 25 8.9
NCR_G_C2.587 Ncr_G_C2.587 25 8.9
>NCR_G_C2.523 Ncr_G_C2.523
Length = 130581
Score = 31.8 bits (63), Expect = 0.10
Identities = 15/31 (48%), Positives = 18/31 (57%)
Frame = +1 / +1
Query: 97 TGNSRLSAPKPSLYSLRSGFMLSTASMALII 189
TGN+RLS P P L F L TAS L++
Sbjct: 49636 TGNARLSPPPPEFPLLFLAFNLPTASAILLL 49728
>NCR_G_C2.418 Ncr_G_C2.418
Length = 47903
Score = 27.2 bits (53), Expect(2) = 0.13
Identities = 11/24 (45%), Positives = 14/24 (57%)
Frame = +1 / -2
Query: 79 PSCTFNTGNSRLSAPKPSLYSLRS 150
PSC +N+G+SR P P RS
Sbjct: 41110 PSCPWNSGSSRRIPPCPPTTQCRS 41039
Score = 22.6 bits (43), Expect(2) = 0.13
Identities = 7/16 (43%), Positives = 10/16 (61%)
Frame = +2 / -2
Query: 158 CYPQHQWRSSYSRLNT 205
CY Q W SS+ + +T
Sbjct: 40993 CYSQGVWTSSWKKYHT 40946
>NCR_G_C2.668 Ncr_G_C2.668
Length = 78107
Score = 29.5 bits (58), Expect = 0.51
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1 / -1
Query: 81 WASRIAFDVSDWLLHKQ*GRTS 16
W+ R+A DWLLH+Q R S
Sbjct: 62351 WSGRLAKPYYDWLLHRQCRRQS 62286
>NCR_G_C2.592 Ncr_G_C2.592
Length = 186696
Score = 28.6 bits (56), Expect = 0.96
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 169 LWIT*NRISKNTDWVWVLTV 110
+W+T RIS T W+W+ V
Sbjct: 146960 IWMTRKRISMMTRWIWMTRV 146901
>NCR_G_C2.380 Ncr_G_C2.380
Length = 179343
Score = 28.6 bits (56), Expect = 0.96
Identities = 11/23 (47%), Positives = 16/23 (68%)
Frame = +1 / +3
Query: 58 IKSNATGPSCTFNTGNSRLSAPK 126
+ SN + PSCTF++ +LSA K
Sbjct: 24873 LASNTSTPSCTFHSTKQKLSAWK 24941
>NCR_G_C2.357 Ncr_G_C2.357
Length = 48218
Score = 28.6 bits (56), Expect = 0.96
Identities = 15/39 (38%), Positives = 18/39 (45%)
Frame = +1 / -2
Query: 70 ATGPSCTFNTGNSRLSAPKPSLYSLRSGFMLSTASMALI 186
ATGP + N S P SL RSGF AS ++
Sbjct: 38770 ATGPPGSVNPRQSHHPVPSYSLPCCRSGFSARVASFPVL 38654
>NCR_G_C2.125 Ncr_G_C2.125
Length = 138790
Score = 28.6 bits (56), Expect = 0.96
Identities = 15/42 (35%), Positives = 22/42 (51%)
Frame = +2 / -2
Query: 23 LPYCLCSSQSLTSKAMRLAQVARLIREILDCQHPNPVCIL*D 148
L + LC+ ++ S L Q L ++ DCQH VC +*D
Sbjct: 62658 LRHSLCTVETSASCKYYLLQNPSLSQKDFDCQHFPLVCYV*D 62533
>NCR_G_C2.223 Ncr_G_C2.223
Length = 42533
Score = 26.3 bits (51), Expect(2) = 1.8
Identities = 7/27 (25%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 77 AQVARLIREILDCQHPNPVCIL*DPVL 157
++++RL+ +I+ C HP + P++
Sbjct: 25156 SRLSRLVHDIVFCTHPFTSSVASLPIM 25236
Score = 19.4 bits (36), Expect(2) = 1.8
Identities = 7/18 (38%), Positives = 10/18 (54%)
Frame = +2 / +1
Query: 2 SLFAALVLPYCLCSSQSL 55
S + + P C CSS+ L
Sbjct: 25000 SSISLISYPLCTCSSELL 25053
>NCR_G_C2.309 Ncr_G_C2.309
Length = 70740
Score = 27.6 bits (54), Expect = 1.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 121 PKPSLYSLRSGFMLSTASMALII 189
P PSL S+RSG +S AS+ +I
Sbjct: 9274 PPPSLDSMRSGHPISPASLGHLI 9206
>NCR_G_C2.022_4 Ncr_G_C2.022_4.seq Continuation (4 of 6) of
Ncr_G_C2.022 from base 300001
Length = 110000
Score = 27.6 bits (54), Expect = 1.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3 / -1
Query: 3 LCLPHLFCLIVYAVANRSHQKQCDW 77
LCLPH +IVY + HQ W
Sbjct: 881 LCLPHQQPIIVYHRHHHHHQNSPIW 807
>NCR_G_C2.022_3 Ncr_G_C2.022_3.seq Continuation (3 of 6) of Ncr_G_C2.022
from base 200001
Length = 110000
Score = 27.6 bits (54), Expect = 1.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3 / -3
Query: 3 LCLPHLFCLIVYAVANRSHQKQCDW 77
LCLPH +IVY + HQ W
Sbjct: 100881 LCLPHQQPIIVYHRHHHHHQNSPIW 100807
>NCR_G_C2.621 Ncr_G_C2.621
Length = 42293
Score = 27.6 bits (54), Expect = 1.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2 / -3
Query: 44 SQSLTSKAMRLAQVARLIREILDCQHP 124
SQS + R AQ+ + R DCQHP
Sbjct: 28191 SQSRSQHTNRPAQLVQATRGTPDCQHP 28111
>NCR_G_C2.128 Ncr_G_C2.128
Length = 227066
Score = 27.2 bits (53), Expect = 2.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 74 LAQVARLIREILDCQHPNPVCIL 142
L Q+A + I D HP PVC+L
Sbjct: 197486 LQQLAHVRAVIADTFHPAPVCVL 197554
>NCR_G_C2.436 Ncr_G_C2.436
Length = 76402
Score = 27.2 bits (53), Expect = 2.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2 / -1
Query: 194 CCMMSAIDAVDNIKPDLKEYRLGLGADSLEFPVLNVQL 81
C ++++ + N +PD +R L A S +P L QL
Sbjct: 57397 CSILASETRLGNRRPDCSLHRP*LNAMSTRYPFLPDQL 57284
>NCR_G_C2.197 Ncr_G_C2.197
Length = 75232
Score = 27.2 bits (53), Expect = 2.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1 / +1
Query: 70 ATGPSCTFNTGNSRLSAPKPSLYSL 144
AT P ++G + LS P+P++ SL
Sbjct: 892 ATAPLSCSSSGITSLSGPRPTMASL 966
>NCR_G_C2.569 Ncr_G_C2.569
Length = 192756
Score = 26.7 bits (52), Expect = 3.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1 / -1
Query: 109 RLSAPKPSLYSLRSGFMLSTASMA 180
RLSAP PS RS +LST++ A
Sbjct: 63981 RLSAPSPSPSQSRSQAILSTSASA 63910
>NCR_G_C2.568 Ncr_G_C2.568
Length = 267169
Score = 26.7 bits (52), Expect = 3.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 146 DPVLCYPQHQW 178
DPVLC P +QW
Sbjct: 186792 DPVLCTPTYQW 186824
Score = 25.8 bits (50), Expect = 6.5
Identities = 11/29 (37%), Positives = 18/29 (61%)
Frame = +1 / +3
Query: 112 LSAPKPSLYSLRSGFMLSTASMALIIQQA 198
L P+ S SLR+GF+L+ ++ Q+A
Sbjct: 98940 LHPPRDSFRSLRAGFLLAFHPRPVVPQEA 99026
>NCR_G_C2.701 Ncr_G_C2.701
Length = 74456
Score = 26.7 bits (52), Expect = 3.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2 / +2
Query: 113 CQHPNPVCIL*DPVLCYPQHQWRSSYS 193
CQHP P+ L D V Q +RSS S
Sbjct: 54677 CQHPTPLTSLRDTVWRSGQGAFRSSSS 54757
>NCR_G_C2.191 Ncr_G_C2.191
Length = 18149
Score = 26.7 bits (52), Expect = 3.4
Identities = 11/24 (45%), Positives = 16/24 (65%)
Frame = +2 / +2
Query: 26 PYCLCSSQSLTSKAMRLAQVARLI 97
P+ CS+QSL S+ LAQ+ L+
Sbjct: 13883 PHLQCSTQSLASRYSYLAQLGCLV 13954
>NCR_G_C2.430 Ncr_G_C2.430
Length = 226714
Score = 26.7 bits (52), Expect = 3.4
Identities = 11/29 (37%), Positives = 15/29 (50%)
Frame = +2 / -2
Query: 47 QSLTSKAMRLAQVARLIREILDCQHPNPV 133
Q T L Q+AR+ + C HP+PV
Sbjct: 116904 QGATGACQDLQQLARICQASERCVHPDPV 116818
Score = 26.7 bits (52), Expect = 3.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1 / +3
Query: 19 CSALLFMQ*PIAHIKSNATGPSCTFNTGNSR 111
C L+ + H SNA P+C+ N ++R
Sbjct: 208809 CQHLVLHNSVLVHFSSNAMNPTCSTNFRSAR 208901
>NCR_G_C2.017 Ncr_G_C2.017
Length = 86020
Score = 26.3 bits (51), Expect = 4.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1 / -1
Query: 121 PKPSLYSLRSGFMLSTASMALIIQQA 198
P PS LRSGF++ AL++ A
Sbjct: 58012 PSPSACILRSGFLVPLVPSALLLGNA 57935
>NCR_G_C2.236 Ncr_G_C2.236
Length = 344103
Score = 26.3 bits (51), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (54%)
Frame = +1 / -1
Query: 70 ATGPSCTFNTGNSRLSAPKPSLYSLRS 150
+T P C NT LS P+P+ + RS
Sbjct: 6318 STSPGCGSNTREC*LSPPQPAARACRS 6238
Score = 25.3 bits (49), Expect = 8.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / -3
Query: 5 LFAALVLPYCLCSSQSLTSKAMRLAQV 85
+ +L LP CL S++ LTS M AQ+
Sbjct: 143209 IMESLHLPNCLGSTEHLTSDRMWKAQL 143129
>NCR_G_C2.446 Ncr_G_C2.446
Length = 145200
Score = 26.3 bits (51), Expect = 4.7
Identities = 12/36 (33%), Positives = 18/36 (49%)
Frame = +1 / +3
Query: 46 PIAHIKSNATGPSCTFNTGNSRLSAPKPSLYSLRSG 153
P + S + PSCT ++ + A KPS + SG
Sbjct: 134751 PASSPSSGVSSPSCTCLATSTGVPAAKPSTMTSASG 134858
>NCR_G_C2.437 Ncr_G_C2.437
Length = 118197
Score = 26.3 bits (51), Expect = 4.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2 / +3
Query: 38 CSSQSLTSKAMRLAQVARLIREILDCQHPNP 130
C S SL + LA++ ++ HPNP
Sbjct: 115458 CPSFSLLHSPLTLARLPPTPPSVIKSNHPNP 115550
>NCR_G_C2.112 Ncr_G_C2.112
Length = 81259
Score = 26.3 bits (51), Expect = 4.7
Identities = 10/26 (38%), Positives = 13/26 (49%)
Frame = -3 / +2
Query: 142 KNTDWVWVLTV*NFPY*TCNLGQSHC 65
K TDW W + V C+L Q +C
Sbjct: 28376 K*TDWCWYVCVFGRKRILCSLSQDYC 28453
>NCR_G_C2.034 Ncr_G_C2.034
Length = 62480
Score = 26.3 bits (51), Expect = 4.7
Identities = 10/19 (52%), Positives = 12/19 (62%)
Frame = +1 / -2
Query: 46 PIAHIKSNATGPSCTFNTG 102
P HI++NATG T N G
Sbjct: 23455 PRKHIEANATGHDVTVNNG 23399
>NCR_G_C2.582 Ncr_G_C2.582
Length = 45833
Score = 26.3 bits (51), Expect = 4.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 2 SLFAALVLPYCLCSSQSLTS 61
S AAL+LPYC +SQ S
Sbjct: 34118 SQLAALLLPYCNAASQETLS 34177
>NCR_G_C2.064 Ncr_G_C2.064
Length = 47747
Score = 26.3 bits (51), Expect = 4.7
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = +3 / -2
Query: 69 CDWPKLHV 92
CDWP+LHV
Sbjct: 28927 CDWPRLHV 28904
>NCR_G_C2.585 Ncr_G_C2.585
Length = 245975
Score = 26.3 bits (51), Expect = 4.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1 / -1
Query: 73 TGPSCTFNTGNSRLSAPKPSLYSLRS 150
+ PSC + + LSAP PS LRS
Sbjct: 161519 SSPSCPSVSATTSLSAPVPSSKLLRS 161442
>NCR_G_C2.059 Ncr_G_C2.059
Length = 89435
Score = 26.3 bits (51), Expect = 4.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 73 TGPSCTFNTGNSRLSAPKPSLYSL 144
TG + TFNTGN L A S +L
Sbjct: 76368 TGLTSTFNTGNPSLGARNSSTTNL 76297
>NCR_G_C2.042_4 Ncr_G_C2.042_4.seq Continuation (4 of 6) of Ncr_G_C2.042
from base 300001
Length = 110000
Score = 26.3 bits (51), Expect = 4.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3 / +2
Query: 76 QSHCF*CERLATA*TIRQNKCGKQ 5
QSH CER T T+R K G+Q
Sbjct: 84080 QSHERSCERTFTDATLRSGKAGRQ 84151
Score = 25.3 bits (49), Expect = 8.9
Identities = 12/18 (66%), Positives = 13/18 (71%)
Frame = +2 / +3
Query: 5 LFAALVLPYCLCSSQSLT 58
LFA L+LPY L QSLT
Sbjct: 39375 LFALLLLPYKLRLRQSLT 39428
>NCR_G_C2.894 Ncr_G_C2.894
Length = 16571
Score = 26.3 bits (51), Expect = 4.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2 / -2
Query: 107 EFPVLNVQLGPVALLLM*AIGYCINN 30
E+P LN++LG + LLL+ Y N
Sbjct: 6685 EYPNLNIELGGILLLLIAPSFYVYTN 6608
>NCR_G_C2.242 Ncr_G_C2.242
Length = 30828
Score = 26.3 bits (51), Expect = 4.7
Identities = 12/28 (42%), Positives = 17/28 (59%)
Frame = +2 / +3
Query: 17 LVLPYCLCSSQSLTSKAMRLAQVARLIR 100
L++ YCL LTS A RL+ + R +R
Sbjct: 30681 LLVGYCLRPPSRLTSTAHRLSTLTRPLR 30764
>NCR_G_C2.521 Ncr_G_C2.521
Length = 150662
Score = 26.3 bits (51), Expect = 4.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1 / +3
Query: 81 WASRIAFDVSDWLLHKQ*GRTSAANK 4
W R+A S W LH++ RT++ +
Sbjct: 71607 WRYRLASSTSPWTLHERLMRTTSGRR 71684
>NCR_G_C2.540 Ncr_G_C2.540
Length = 57864
Score = 26.3 bits (51), Expect = 4.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2 / -2
Query: 194 CCMMSAIDAVDNIKPDLKEYRLGLGADSLEFPVLNVQL 81
CC SA + L ++L L A + FP+ VQL
Sbjct: 10760 CCSPSASQRATRVTSQLGRFQLALCAATSLFPLWIVQL 10647
>NCR_G_C2.164 Ncr_G_C2.164
Length = 75564
Score = 26.3 bits (51), Expect = 4.7
Identities = 12/39 (30%), Positives = 16/39 (40%)
Frame = +2 / -2
Query: 11 AALVLPYCLCSSQSLTSKAMRLAQVARLIREILDCQHPN 127
A + + CL L V L RE+L +HPN
Sbjct: 53624 AQMCIAQCLTEQGKHMEATEELINVVELRREVLGPEHPN 53508
>NCR_G_C2.481 Ncr_G_C2.481
Length = 4745
Score = 25.8 bits (50), Expect = 6.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 110 LEFPVLNVQLGPVALLLM 57
+E P LNV LGP +L+++
Sbjct: 1163 IEGPSLNVSLGPTSLIII 1110
>NCR_G_C2.762 Ncr_G_C2.762
Length = 89157
Score = 25.8 bits (50), Expect = 6.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1 / +2
Query: 144 QRIQTGFGC*QSRISRIKRATWASRIAFDVSDWLL 40
+++Q F C +S + R+ IAFD S W L
Sbjct: 76313 RKLQLPFSCPRSFPLSLSRSLLTLAIAFDPSGWSL 76417
>NCR_G_C2.246 Ncr_G_C2.246
Length = 86567
Score = 25.8 bits (50), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 70 ATGPSCTFNTGNSRLSAPK 126
AT P+CT +T + +S+P
Sbjct: 53226 ATPPTCTCSTDSPPVSSPS 53170
>NCR_G_C2.069 Ncr_G_C2.069
Length = 39331
Score = 25.8 bits (50), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (56%)
Frame = +1 / +3
Query: 82 SCTFNTGNSRLSAPKPSLYSLRSGFMLS 165
+CT +S LS P+P ++SL F S
Sbjct: 29424 TCTRLRAHSGLSVPRPFIHSLSHSFFHS 29507
>NCR_G_C2.220 Ncr_G_C2.220
Length = 142147
Score = 25.8 bits (50), Expect = 6.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 182 SAIDAVDNIKPDLKEYRLGLGADSLEF 102
SAI +V ++ ++E+R+ G DS F
Sbjct: 26758 SAIASVQDVNIGVREFRIKFGVDSAVF 26678
>NCR_G_C2.055 Ncr_G_C2.055
Length = 79879
Score = 25.8 bits (50), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -3
Query: 69 CDWPKLHV* 95
CDWP LHV*
Sbjct: 37904 CDWPVLHV* 37878
>NCR_G_C2.009 Ncr_G_C2.009
Length = 16452
Score = 25.8 bits (50), Expect = 6.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1 / -1
Query: 76 GPSCTFNTGNSRLSAPKPSLYSLRS 150
G S GN AP PS+YS+ S
Sbjct: 12843 GSSGYLGLGNDYFPAPVPSIYSISS 12769
>NCR_G_C2.111 Ncr_G_C2.111
Length = 322912
Score = 25.8 bits (50), Expect = 6.5
Identities = 10/26 (38%), Positives = 12/26 (45%)
Frame = +2 / -1
Query: 116 QHPNPVCIL*DPVLCYPQHQWRSSYS 193
+H P C D CYP H R + S
Sbjct: 97918 KHRAPPCYAEDSHQCYPGHSMRKAVS 97841
Score = 25.8 bits (50), Expect = 6.5
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 23 LPYCLCSSQSLTS 61
LP+CLCSS S +S
Sbjct: 295202 LPWCLCSSASASS 295240
>NCR_G_C2.299 Ncr_G_C2.299
Length = 59900
Score = 25.8 bits (50), Expect = 6.5
Identities = 9/26 (34%), Positives = 13/26 (49%)
Frame = +2 / +3
Query: 128 PVCIL*DPVLCYPQHQWRSSYSRLNT 205
PVC +* + H W+ S +NT
Sbjct: 8808 PVCFV*SSQMFMQSHPWQPKRSEMNT 8885
>NCR_G_C2.202 Ncr_G_C2.202
Length = 148112
Score = 25.8 bits (50), Expect = 6.5
Identities = 8/23 (34%), Positives = 12/23 (51%)
Frame = +3 / -1
Query: 15 HLFCLIVYAVANRSHQKQCDWPK 83
H IVY +R H ++ WP+
Sbjct: 119132 HWIIWIVYRAPSRHHHRRLPWPR 119064
>NCR_G_C2.359 Ncr_G_C2.359
Length = 41101
Score = 25.8 bits (50), Expect = 6.5
Identities = 12/34 (35%), Positives = 16/34 (46%)
Frame = +3 / +2
Query: 51 RSHQKQCDWPKLHV*YGKF*TVSTQTQSVFFEIR 152
R H C P HV G+F + VFFE++
Sbjct: 13127 RGH*THCPRPDRHVSIGEFALLG*VWDPVFFEVK 13228
>NCR_G_C2.163 Ncr_G_C2.163
Length = 52618
Score = 25.8 bits (50), Expect = 6.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3 / +3
Query: 6 CLPHLFCLIVYAVANRSHQKQCDW 77
CLP LF + + + +R + CD+
Sbjct: 16008 CLPALFFCVTFVILSRFYIVACDY 16079
>NCR_G_C2.303 Ncr_G_C2.303
Length = 36216
Score = 25.8 bits (50), Expect = 6.5
Identities = 8/22 (36%), Positives = 11/22 (49%)
Frame = +3 / -2
Query: 9 LPHLFCLIVYAVANRSHQKQCD 74
LP FC++V S + QC
Sbjct: 22991 LPRTFCIVVAIPVQTS*KGQCR 22926
>NCR_G_C2.439 Ncr_G_C2.439
Length = 63445
Score = 25.8 bits (50), Expect = 6.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / +1
Query: 166 WIT*NRISKNTDWVW 122
W+T* R S+ T W W
Sbjct: 37507 WLT*RRTSRITKWPW 37551
>NCR_G_C2.353 Ncr_G_C2.353
Length = 33194
Score = 25.3 bits (49), Expect = 8.9
Identities = 7/22 (31%), Positives = 11/22 (49%)
Frame = +3 / +1
Query: 12 PHLFCLIVYAVANRSHQKQCDW 77
PH + R HQ++C+W
Sbjct: 4624 PHFGAGAARCIPGRKHQQRCEW 4689
>NCR_G_C2.235 Ncr_G_C2.235
Length = 51138
Score = 25.3 bits (49), Expect = 8.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2 / +3
Query: 119 HPNPVCIL*DPVLCYPQHQW 178
H P C DPVL + +H W
Sbjct: 11424 HFEPPCSWYDPVLSFNKHLW 11483
>NCR_G_C2.727 Ncr_G_C2.727
Length = 67009
Score = 25.3 bits (49), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1 / +2
Query: 61 KSNATGPSCTFNTGNSRLSAPKPSLYSLRSG 153
+ A P C F+T ++ AP+ S S R+G
Sbjct: 23312 RRQAISPPCAFSTTSATPPAPRRSTPSGRAG 23404
>NCR_G_C2.459 Ncr_G_C2.459
Length = 28434
Score = 25.3 bits (49), Expect = 8.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1 / +3
Query: 171 CCG*HKTGSQRIQTGFGC*QSRISRIKRATWASRI 67
C +GSQ T C +S I + R+ W SR+
Sbjct: 8547 CRSPQHSGSQWTGTRGRCTESGIGSLARSKWGSRL 8651
>NCR_G_C2.379 Ncr_G_C2.379
Length = 245776
Score = 25.3 bits (49), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = +3 / +1
Query: 9 LPHLFCLIVYAVANRSHQKQCD 74
LPH CLI N +++ CD
Sbjct: 208600 LPHALCLIPVVGINLVYKRPCD 208665
>NCR_G_C2.574 Ncr_G_C2.574
Length = 180542
Score = 25.3 bits (49), Expect = 8.9
Identities = 12/28 (42%), Positives = 17/28 (59%)
Frame = +2 / -1
Query: 23 LPYCLCSSQSLTSKAMRLAQVARLIREI 106
LP+ + S S TSK RL+Q AR + +
Sbjct: 174173 LPHFVQFSASKTSKPSRLSQTARPLHSL 174090
>NCR_G_C2.848 Ncr_G_C2.848
Length = 44195
Score = 25.3 bits (49), Expect = 8.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 84 TWASRIAFDVSDWLLHKQ*GRTS 16
TW+ R+A +WLL +Q R S
Sbjct: 22670 TWSGRLAKPSFNWLLRRQCRRQS 22602
>NCR_G_C2.322 Ncr_G_C2.322
Length = 116391
Score = 25.3 bits (49), Expect = 8.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 1 VFVCRTCSALLFMQ*PIAHIKSNATGPS 84
+ +CRTC+ +L P + + +A PS
Sbjct: 98806 IVMCRTCNYVLVQHSPFSRRRRSAKHPS 98889
>NCR_G_C2.259 Ncr_G_C2.259
Length = 185660
Score = 25.3 bits (49), Expect = 8.9
Identities = 13/31 (41%), Positives = 14/31 (44%)
Frame = +3 / -2
Query: 75 WPKLHV*YGKF*TVSTQTQSVFFEIRFYVIH 167
WP LHV F T Q + RF VIH
Sbjct: 95665 WPVLHVDSHLFLTRPFQVLPTMYN*RFTVIH 95573
>NCR_G_C2.218 Ncr_G_C2.218
Length = 129490
Score = 25.3 bits (49), Expect = 8.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1 / -1
Query: 73 TGPSCTFNTGNSRLSAPKPSLYSLRSGFMLSTA 171
+ P + ++ ++ SAPKPS RS + STA
Sbjct: 97411 SAPPYSQDSPHTGTSAPKPSATPTRSSVIASTA 97313
>NCR_G_C2.116 Ncr_G_C2.116
Length = 72284
Score = 25.3 bits (49), Expect = 8.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 17 LVLPYCLCSSQSLTSKAMRLAQVARLI 97
LVLP+CL ++ S + MR + A LI
Sbjct: 13132 LVLPWCLLANSSSPLEGMRRSGRALLI 13212
>NCR_G_C2.423 Ncr_G_C2.423
Length = 97362
Score = 25.3 bits (49), Expect = 8.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 204 VFSLLYDERH*C 169
V++ L D+RH*C
Sbjct: 32859 VYTTLIDKRH*C 32894
>NCR_G_C2.403 Ncr_G_C2.403
Length = 165442
Score = 25.3 bits (49), Expect = 8.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2 / +1
Query: 149 PVLCYPQHQWRSSYSRLNTM 208
P LC P HQW TM
Sbjct: 94453 PSLCPPFHQWHCQVPEAGTM 94512
>NCR_G_C2.622 Ncr_G_C2.622
Length = 123388
Score = 25.3 bits (49), Expect = 8.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1 / -3
Query: 121 PKPSLYSLRSGFMLS 165
PKP++ + RSGFM++
Sbjct: 76373 PKPAIMACRSGFMVA 76329
>NCR_G_C2.404 Ncr_G_C2.404
Length = 264766
Score = 25.3 bits (49), Expect = 8.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1 / +2
Query: 106 SRLSAPKPSLYSLRSGFMLSTASMALIIQQAEY 204
S +SA P S+R LST + A+ E+
Sbjct: 68123 SEISAG*PGQASMRMSLTLSTGAQAIRCCHCEF 68221
>NCR_G_C2.271 Ncr_G_C2.271
Length = 96618
Score = 25.3 bits (49), Expect = 8.9
Identities = 9/22 (40%), Positives = 14/22 (62%)
Frame = +2 / -3
Query: 23 LPYCLCSSQSLTSKAMRLAQVA 88
+P CLC ++L S M L +V+
Sbjct: 63682 IPLCLCQFRTLFSNVMYLGRVS 63617
>NCR_G_C2.195 Ncr_G_C2.195
Length = 69890
Score = 25.3 bits (49), Expect = 8.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1 / -2
Query: 111 SRISRIKRATWASRIAFDVSDWLLHKQ*GRTSA 13
+R R RA WAS ++ D S W + * R S+
Sbjct: 1534 ARSRR*SRAVWASMLSPDSSGWPVEIP*PRYSS 1436
>NCR_G_C2.398 Ncr_G_C2.398
Length = 27116
Score = 25.3 bits (49), Expect = 8.9
Identities = 13/29 (44%), Positives = 14/29 (47%)
Frame = -2 / +1
Query: 134 RLGLGADSLEFPVLNVQLGPVALLLM*AI 48
RL L L FP+ GP A LL AI
Sbjct: 7483 RLALRGIRLPFPIRTTPQGPRAPLLALAI 7569
>NCR_G_C2.587 Ncr_G_C2.587
Length = 32501
Score = 25.3 bits (49), Expect = 8.9
Identities = 11/37 (29%), Positives = 20/37 (53%)
Frame = +2 / +2
Query: 71 RLAQVARLIREILDCQHPNPVCIL*DPVLCYPQHQWR 181
++A+++ + R Q + VC + V+ Y QH WR
Sbjct: 31169 KIAEISDVTRYGCQGQEDHRVCFVKIQVVHYLQHGWR 31279
Database: /phillip/Ncr/Ncr_G
Posted date: Jan 24, 2002 1:55 PM
Number of letters in database: 37,969,317
Number of sequences in database: 995
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 20780758
Number of Sequences: 995
Number of extensions: 250294
Number of successful extensions: 14753
Number of sequences better than 10.0: 69
length of query: 70
length of database: 12,656,439
effective HSP length: 42
effective length of query: 27
effective length of database: 12,614,649
effective search space: 340595523
effective search space used: 340595523
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 49 (25.3 bits)