The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.

BLASTX 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FgrNT3_0_A21.seq Fgr_0_A21 LENGTH:120bp ; DIRECTION:5 ;
CLONE:Fgr_0_A21 ; CLONELIB: n/a ; TISSUE:
         (120 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
           907,641 sequences; 284,333,007 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC69145.1|  (AJ306295) putative membrane protein [Pichi...    33   1.0  

>emb|CAC69145.1| (AJ306295) putative membrane protein [Pichia anomala]
          Length = 619

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 66  RTSHYGIVVWTGFTFWLL 119
           +T HY  V+W G+TFW+L
Sbjct: 421 KTGHYNPVIWAGYTFWVL 438



  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 29, 2002  2:16 AM
  Number of letters in database: 284,333,007
  Number of sequences in database:  907,641
  
Lambda     K      H
   0.316    0.127     0.00 

Gapped
Lambda     K      H
   0.267   0.0410 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,826,517
Number of Sequences: 907641
Number of extensions: 1159777
Number of successful extensions: 3802
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3801
length of database: 284,333,007
effective HSP length: 15
effective length of database: 270,718,392
effective search space used: 6497241408
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)