The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FgrNT3_0_M15.seq Fgr_0_M15 LENGTH:525bp ; DIRECTION:5 ;
CLONE:Fgr_0_M15 ; CLONELIB: n/a ; TISSUE:
(525 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
907,641 sequences; 284,333,007 total letters
Score E
Sequences producing significant alignments: (bits) Value
pdb|1G65|H Chain H, Crystal Structure Of Epoxomicin:20s Pro... 254 4e-67
ref|NP_014800.1| (NC_001147) putative proteasome subunit; P... 254 4e-67
pdb|1FNT|I Chain I, Crystal Structure Of The 20s Proteasome... 254 4e-67
ref|NP_594544.1| (NC_003424) putative proteasome component ... 248 3e-65
dbj|BAA19146.1| (AB000540) proteasome component PUP1 precur... 248 3e-65
ref|NP_002790.1| (NM_002799) proteasome (prosome, macropain... 234 4e-61
ref|NP_445984.1| (NM_053532) proteasome (prosome, macropain... 234 4e-61
gb|AAH00509.1|AAH00509 (BC000509) proteasome (prosome, macr... 234 4e-61
gb|AAH17116.1|AAH17116 (BC017116) proteasome (prosome, macr... 234 4e-61
dbj|BAB22385.1| (AK002823) data source:MGD, source key:MGI:... 233 9e-61
ref|NP_035317.1| (NM_011187) proteasome (prosome, macropain... 232 1e-60
dbj|BAB28354.1| (AK012613) data source:MGD, source key:MGI:... 231 3e-60
gb|AAD53521.1|AF155581_1 (AF155581) proteasome subunit beta... 230 6e-60
gb|AAH08414.1|AAH08414 (BC008414) proteasome (prosome, macr... 229 1e-59
dbj|BAA96835.1| (AB026564) beta 2 subunit of 20S proteasome... 227 4e-59
gb|AAF49685.1| (AE003532) Prosbeta2 gene product [Drosophil... 227 5e-59
emb|CAA73620.1| (Y13177) multicatalytic endopeptidase [Arab... 225 2e-58
ref|NP_198874.1| (NM_123422) 20S proteasome beta subunit PB... 225 2e-58
emb|CAA73621.1| (Y13178) multicatalytic endopeptidase [Arab... 224 4e-58
ref|NP_566818.1| (NM_113658) 20S proteasome beta subunit (P... 224 4e-58
ref|NP_524076.1| (NM_079352) Proteasome beta2 subunit; anon... 223 7e-58
gb|AAB82571.1| (AF025792) 20S proteasome beta2 subunit [Dro... 223 7e-58
emb|CAA05209.1| (AJ002142) proteasome Z subunit [Ciona inte... 211 4e-54
gb|AAF46088.1| (AE003435) CG18341 gene product [Drosophila ... 187 4e-47
gb|AAG16286.1|AC016024_9 (AC016024) leishmania proteasome s... 186 7e-47
sp|O35955|PSBA_MOUSE Proteasome subunit beta type 10 precur... 186 1e-46
gb|AAH04730.1|AAH04730 (BC004730) proteasome (prosome, macr... 186 1e-46
ref|NP_038668.1| (NM_013640) proteasome (prosomome, macropa... 185 2e-46
ref|NP_002792.1| (NM_002801) proteasome (prosome, macropain... 184 4e-46
gb|AAD53517.1|AF155577_1 (AF155577) proteasome subunit beta... 182 2e-45
emb|CAC13118.1| (AJ271723) low molecular mass polypeptide s... 181 2e-45
emb|CAA10208.1| (AJ130820) proteasome subunit beta-2 [Trypa... 181 4e-45
dbj|BAB83847.1| (AB073377) MECL1~partially supported by GEN... 177 4e-44
gb|AAL82481.1| (AF473832) proteasome subunit LMP10 [Bos tau... 176 1e-43
emb|CAC43321.1| (AJ291736) putative beta proteasome subunit... 172 2e-42
emb|CAB96046.1| (AJ404677) proteasome beta 2 subunit [Giard... 169 1e-41
ref|NP_493271.1| (NM_060870) Proteasome A-type and B-type [... 159 1e-38
ref|NP_596997.1| (NC_003238) PROTEASOME BETA-TYPE SUBUNIT (... 140 5e-33
gb|AAL68040.1| (AY075170) AT05866p [Drosophila melanogaster] 136 9e-32
ref|NP_113181.1| (NC_002751) 26S proteasome SU [Guillardia ... 121 3e-27
gb|AAK08097.1| (AF337892) putative 20S proteasome beta2 sub... 115 2e-25
gb|AAF52066.1| (AE003603) CG12161 gene product [Drosophila ... 100 1e-20
emb|CAA73617.1| (Y13174) multicatalytic endopeptidase [Arab... 96 1e-19
gb|AAD45962.1|U44425_1 (U44425) protein serine kinase c17 [... 89 2e-17
ref|NP_596295.1| (NC_003423) proteasome component precursor... 87 8e-17
gb|AAD53036.1|AF115539_1 (AF115539) proteasome delta [Oncor... 82 3e-15
ref|NP_069317.1| (NC_000917) proteasome, subunit beta (psmB... 81 4e-15
dbj|BAA19761.1| (D87690) proteasome subunit Y [Lethenteron ... 80 1e-14
ref|NP_571466.1| (NM_131391) proteasome (prosome, macropain... 79 2e-14
ref|NP_571227.1| (NM_131152) proteasome (prosome, macropain... 78 5e-14
gb|AAG43434.1|AF184932_1 (AF184932) low molecular mass prot... 78 5e-14
gb|AAD28715.1|AF112117_1 (AF112117) low molecular mass poly... 78 5e-14
gb|AAL59852.1|AF357920_1 (AF357920) proteasome beta-subunit... 77 6e-14
dbj|BAA19760.1| (D87689) proteasome subunit Y [Xenopus laevis] 77 8e-14
gb|AAD53038.1|AF115541_1 (AF115541) low molecular mass prot... 77 8e-14
emb|CAC02011.2| (AL390114) probable proteasome beta-1 subun... 77 1e-13
ref|NP_012533.1| (NC_001142) Proteasome subunit necessary f... 76 1e-13
emb|CAA55591.1| (X78991) proteasomal subunit Pre3 [Saccharo... 76 1e-13
pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome... 76 1e-13
pdb|1G65|N Chain N, Crystal Structure Of Epoxomicin:20s Pro... 76 1e-13
ref|NP_147297.1| (NC_000854) proteasome, beta subunit [Aero... 76 2e-13
ref|NP_248232.1| (NC_000909) proteasome, subunit beta (psmB... 75 2e-13
pir||T48677 proteasome beta-1 chain [validated] - Haloferax... 75 3e-13
ref|NP_032972.1| (NM_008946) proteasome (prosome, macropain... 75 3e-13
gb|AAL59853.1|AF357921_1 (AF357921) proteasome beta-subunit... 75 3e-13
ref|XP_027825.1| (XM_027825) similar to Proteasome subunit ... 75 4e-13
ref|XP_085695.1| (XM_085695) similar to Proteasome subunit ... 75 4e-13
pir||S17522 multicatalytic endopeptidase complex (EC 3.4.99... 75 4e-13
ref|NP_376361.1| (NC_003106) 207aa long hypothetical protea... 74 5e-13
ref|NP_341826.1| (NC_002754) Proteasome subunit [Sulfolobus... 74 7e-13
emb|CAA10283.1| (AJ131043) proteasome beta-1 subunit [Trypa... 74 9e-13
gb|AAD53037.1|AF115540_1 (AF115540) low molecular mass prot... 74 9e-13
pir||JS0753 multicatalytic endopeptidase complex (EC 3.4.99... 73 1e-12
ref|NP_593825.1| (NC_003424) proteasome component pts1 prec... 73 1e-12
prf||2016287A housekeeping proteasome:SUBUNIT=2 [Mus musculus] 73 1e-12
sp|Q60692|PSB6_MOUSE Proteasome subunit beta type 6 precurs... 73 1e-12
emb|CAA43963.1| (X61971) macropain subunit delta [Homo sapi... 73 1e-12
gb|AAA75375.1| (U13393) delta proteasome subunit [Mus muscu... 73 1e-12
ref|NP_476440.1| (NM_057099) proteasome (prosome, macropain... 73 1e-12
sp|P28073|PSB6_RAT Proteasome subunit beta type 6 precursor... 73 1e-12
ref|NP_493558.1| (NM_061157) Proteasome A-type and B-type [... 73 1e-12
pir||B54589 proteasome subunit Y - human 73 2e-12
sp|P28072|PSB6_HUMAN Proteasome subunit beta type 6 precurs... 73 2e-12
ref|NP_560846.1| (NC_003364) proteasome, beta subunit [Pyro... 73 2e-12
pir||JE0101 proteasome subunit 1 - slime mold (Dictyosteliu... 72 2e-12
ref|NP_036840.1| (NM_012708) low molecular mass polypeptide... 72 3e-12
ref|NP_002791.1| (NM_002800) proteasome (prosome, macropain... 72 3e-12
pir||A55632 proteasome LMP2.s - human >gi|392959|gb|AAC5015... 72 3e-12
ref|XP_039601.3| (XM_039601) similar to proteasome (prosome... 72 3e-12
pir||S27332 proteasome chain LMP2 - human >gi|36059|emb|CAA... 72 3e-12
ref|NP_126433.1| (NC_000868) proteasome, subunit beta [Pyro... 72 3e-12
ref|NP_147287.1| (NC_000854) proteasome, beta subunit [Aero... 72 3e-12
sp|Q50534|PRCB_METTE PROTEASOME BETA SUBUNIT PRECURSOR (MUL... 71 4e-12
ref|XP_080732.1| (XM_080732) l(2)05070 [Drosophila melanoga... 71 4e-12
gb|AAL28435.1| (AY060887) GM04535p [Drosophila melanogaster] 71 4e-12
gb|AAL49013.1| (AY071391) RE44901p [Drosophila melanogaster] 71 4e-12
ref|NP_571753.1| (NM_131678) proteasome (prosome, macropain... 71 4e-12
dbj|BAA19766.1| (D89724) LMP2 [Oryzias latipes] 71 6e-12
dbj|BAB84548.1| (AB073378) LMP2 [Oryzias latipes] 71 6e-12
emb|CAC13119.1| (AJ271723) low molecular mass polypeptide s... 70 8e-12
emb|CAC13120.1| (AJ271723) low molecular mass polypeptide s... 70 1e-11
gb|AAF72737.1|AF097521_1 (AF097521) proteasome B type subun... 70 1e-11
gb|AAH13897.1|AAH13897 (BC013897) Similar to proteasome (pr... 70 1e-11
gb|AAB87682.1| (AF032393) LMP2 [Danio rerio] 70 1e-11
pir||JC2019 multicatalytic endopeptidase complex (EC 3.4.99... 70 1e-11
ref|NP_571751.1| (NM_131676) proteasome (prosome, macropain... 70 1e-11
dbj|BAB83846.1| (AB073377) LMP2-like~partially supported by... 70 1e-11
ref|NP_038613.1| (NM_013585) proteosome (prosome, macropain... 69 2e-11
dbj|BAA96834.1| (AB026563) beta 1 subunit of 20S proteasome... 69 2e-11
gb|AAC69911.1| (AF100956) LMP 2 [Mus musculus] 69 2e-11
dbj|BAA19759.1| (D87687) LMP2 [Xenopus laevis] 69 2e-11
sp|O24361|PSB5_SPIOL Proteasome subunit beta type 5 precurs... 69 2e-11
sp|O35522|PSB9_MUSMB Proteasome subunit beta type 9 precurs... 69 3e-11
sp|O35523|PSB9_MUSPL Proteasome subunit beta type 9 precurs... 68 4e-11
sp|O35524|PSB9_MUSSI Proteasome subunit beta type 9 precurs... 68 5e-11
sp|P28076|PSB9_MOUSE Proteasome subunit beta type 9 precurs... 68 5e-11
sp|O35521|PSB9_MUSDU Proteasome subunit beta type 9 precurs... 68 5e-11
ref|NP_579133.1| (NC_003413) proteasome, subunit beta (mult... 68 5e-11
gb|AAL26914.1|AF323592_1 (AF323592) putative 20S proteasome... 68 5e-11
ref|NP_143277.1| (NC_000961) proteasome beta subunit precur... 67 6e-11
sp|P93395|PSB6_TOBAC Proteasome subunit beta type 6 precurs... 67 6e-11
sp|P28075|PSB5_RAT Proteasome subunit beta type 5 precursor... 67 6e-11
ref|NP_194858.1| (NM_119279) multicatalytic endopeptidase c... 67 1e-10
ref|NP_111182.1| (NC_002689) Proteasome protease subunit be... 67 1e-10
dbj|BAA10935.1| (D64058) nurse shark LMPX [Ginglymostoma ci... 67 1e-10
emb|CAC43326.1| (AJ291741) putative beta5 proteasome subuni... 66 2e-10
dbj|BAB68718.1| (AB039194) proteasome subunit MECL1 [Mus mu... 66 2e-10
ref|NP_376192.1| (NC_003106) 197aa long hypothetical protea... 65 2e-10
ref|NP_172765.1| (NM_101176) proteasome epsilon chain precu... 65 2e-10
gb|AAK92808.1| (AY050871) putative multicatalytic endopepti... 65 2e-10
ref|NP_558859.1| (NC_003364) proteasome beta subunit [Pyrob... 65 2e-10
ref|NP_394085.1| (NC_002578) proteasome, beta chain [Thermo... 65 3e-10
ref|NP_189265.1| (NM_113541) 26S proteasome beta subunit, p... 65 3e-10
pir||A45744 20 S cytosolic proteasome subunit - mouse 65 4e-10
pir||S30539 multicatalytic endopeptidase complex (EC 3.4.99... 64 7e-10
ref|NP_143414.1| (NC_000961) proteasome, alpha subunit [Pyr... 64 7e-10
ref|NP_035316.1| (NM_011186) proteasome beta type subunit 5... 64 7e-10
sp|O55234|PSB5_MOUSE Proteasome subunit beta type 5 precurs... 64 7e-10
gb|AAH12246.1|AAH12246 (BC012246) Similar to proteasome (pr... 64 7e-10
sp|P34065|PSB5_CHICK Proteasome subunit beta type 5 precurs... 64 7e-10
pdb|1G65|K Chain K, Crystal Structure Of Epoxomicin:20s Pro... 64 9e-10
ref|NP_015428.1| (NC_001148) proteasome subunit; Pre2p [Sac... 64 9e-10
ref|NP_279842.1| (NC_002607) proteasome, subunit alpha; Psm... 64 9e-10
ref|NP_597314.1| (NC_003235) 20S PROTEASOME BETA-TYPE SUBUN... 64 9e-10
gb|AAA34906.1| (M96667) proteosome-related protein [Sacchar... 64 9e-10
pdb|1G0U|K Chain K, A Gated Channel Into The Proteasome Cor... 64 9e-10
ref|NP_002788.1| (NM_002797) proteasome (prosome, macropain... 63 2e-09
sp|P28074|PSB5_HUMAN Proteasome subunit beta type 5 precurs... 63 2e-09
ref|NP_500125.1| (NM_067724) K08D12.1.p [Caenorhabditis ele... 62 2e-09
pdb|1FNT|L Chain L, Crystal Structure Of The 20s Proteasome... 62 2e-09
gb|AAD53518.1|AF155578_1 (AF155578) proteasome subunit beta... 61 6e-09
ref|NP_126298.1| (NC_000868) proteasome, subunit alpha [Pyr... 60 8e-09
emb|CAA09603.1| (AJ011383) 20S proteasome beta subunit [Cic... 60 8e-09
pir||JC5074 proteasome epsilon chain precursor - Botryllus ... 60 1e-08
emb|CAA66313.1| (X97729) LMP7-like protein [Botryllus schlo... 60 1e-08
dbj|BAA96838.1| (AB026567) beta 5 subunit of 20S proteasome... 60 1e-08
gb|AAL74417.1| (AF449497) proteosome PSMB5/8 protein [Branc... 60 1e-08
ref|NP_542945.1| (NM_080767) low molecular mass polypeptide... 59 2e-08
sp|P28064|PSB8_RAT Proteasome subunit beta type 8 precursor... 59 2e-08
ref|XP_080276.1| (XM_080276) Prosbeta5 [Drosophila melanoga... 59 2e-08
gb|AAF26416.1|AF217726_1 (AF217726) 20S proteasome beta5 su... 59 2e-08
ref|XP_063287.1| (XM_063287) similar to LMP7 of nurse shark... 59 2e-08
ref|XP_042529.1| (XM_042529) proteasome (prosome, macropain... 59 2e-08
gb|AAA56778.1| (U17497) proteasome subunit LMP7 [Homo sapiens] 59 2e-08
sp|P28062|PSB8_HUMAN Proteasome subunit beta type 8 precurs... 59 2e-08
pir||G01564 proteasome chain LMP7 precursor, splice form E2... 59 2e-08
ref|NP_004150.1| (NM_004159) proteasome (prosome, macropain... 59 2e-08
dbj|BAA10932.1| (D64055) LMPX of lamprey [Petromyzon marinus] 59 2e-08
ref|NP_276330.1| (NC_000916) proteasome, beta subunit [Meth... 59 2e-08
dbj|BAA10931.1| (D64054) LMPX of hagfish [Myxine glutinosa] 59 3e-08
ref|NP_579300.1| (NC_003413) proteasome, subunit alpha (mul... 59 3e-08
gb|AAF22654.1| (AF214525) interferon-gamma inducible protea... 57 9e-08
ref|NP_586260.1| (NC_003236) PROTEASOME B-TYPE SUBUNIT DELT... 57 9e-08
emb|CAA45780.1| (X64449) proteasome subunit MC13 [Mus muscu... 56 1e-07
gb|AAA75037.1| (U22035) 20S proteasome subunit Lmp7 [Mus mu... 56 1e-07
sp|P28063|PSB8_MOUSE Proteasome subunit beta type 8 precurs... 56 1e-07
gb|AAA75035.1| (U22033) 20S proteasome subunit Lmp7 [Mus mu... 56 1e-07
gb|AAD22390.1|AF059493_1 (AF059493) proteasome subunit LMP7... 56 1e-07
ref|XP_087984.1| (XM_087984) similar to proteasome (prosome... 56 2e-07
ref|NP_034854.1| (NM_010724) proteosome (prosome, macropain... 56 2e-07
emb|CAC08538.1| (AJ132959) proteasome PRCE (beta-5) subunit... 55 3e-07
gb|AAF37285.1|AF226674_1 (AF226674) 20S proteasome beta 5 s... 55 3e-07
gb|AAB87680.1| (AF032391) proteasome subunit X [Danio rerio] 55 4e-07
ref|NP_275829.1| (NC_000916) proteasome, alpha subunit [Met... 55 4e-07
pir||JC5073 proteasome epsilon chain precursor - Geodia cyd... 55 4e-07
sp|O24733|PSMA_THEK1 Proteasome alpha subunit (Multicatalyt... 54 6e-07
gb|AAF46978.1| (AE003460) CG9868 gene product [Drosophila m... 54 7e-07
gb|AAL68121.1| (AY075254) AT21741p [Drosophila melanogaster] 54 7e-07
dbj|BAA10933.1| (D64056) LMP7 of nurse shark [Ginglymostoma... 54 7e-07
ref|NP_113328.1| (NC_002752) 26S proteasome SU B5 [Guillard... 54 1e-06
dbj|BAA19767.1| (D89725) LMP7 [Oryzias latipes] 53 1e-06
gb|AAC97957.1| (AF104214) proteasome beta 5 subunit [Trypan... 53 1e-06
ref|NP_571467.1| (NM_131392) proteasome (prosome, macropain... 53 2e-06
gb|AAL59861.1|AF363582_1 (AF363582) proteasome beta-subunit... 53 2e-06
dbj|BAB83848.1| (AB073377) LMP7~partially supported by GENS... 52 2e-06
gb|AAA39439.1| (L11613) proteasome [Mus musculus] 52 4e-06
pir||S51325 D13094 protein - fission yeast (Schizosaccharom... 52 4e-06
ref|NP_247571.1| (NC_000909) proteasome, subunit alpha (psm... 51 5e-06
pir||I51537 XeLMPb.aa - African clawed frog >gi|971309|dbj|... 51 5e-06
dbj|BAA10934.1| (D64057) LMP7 [Ginglymostoma cirratum] 51 5e-06
ref|NP_147951.1| (NC_000854) proteasome , alpha subunit [Ae... 50 8e-06
ref|NP_175788.1| (NM_104262) 20S proteasome subunit PAE1 [A... 50 8e-06
ref|XP_079788.1| (XM_079788) similar to CG17331 gene produc... 50 8e-06
gb|AAG43440.1|AF184938_1 (AF184938) low molecular mass prot... 50 1e-05
ref|NP_110823.1| (NC_002689) Proteasome protease subunit al... 50 1e-05
dbj|BAB59449.1| (AP000992) proteasome alpha subunit [Thermo... 50 1e-05
gb|AAL59862.1|AF363583_1 (AF363583) proteasome beta-subunit... 49 2e-05
sp|Q59565|PSMA_METTE Proteasome alpha subunit (Multicatalyt... 49 2e-05
pir||I51536 XeLMPa.aa - African clawed frog >gi|971307|dbj|... 49 2e-05
sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type 5 (20S p... 49 2e-05
ref|XP_065838.1| (XM_065838) similar to proteasome (prosome... 49 3e-05
ref|NP_188046.1| (NM_112287) 20S proteasome subunit PAE2 [A... 49 3e-05
emb|CAB86711.1| (AL163505) 20S proteasome alpha 5 subunit [... 48 5e-05
ref|NP_394744.1| (NC_002578) proteasome alpha subunit [Ther... 48 5e-05
sp|Q9LSU1|PSA5_ORYSA Proteasome subunit alpha type 5 (20S p... 47 7e-05
sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type 5 >gi|17... 46 2e-04
gb|AAK62517.1| (AY034092) putative hydroxyproline-rich prot... 46 2e-04
ref|NP_494913.1| (NM_062512) Peptidase [Caenorhabditis eleg... 46 2e-04
ref|XP_079121.1| (XM_079121) similar to Odorant receptor 23... 44 6e-04
sp|Q9VQE5|PSB2_DROME Probable proteasome subunit beta type 2 44 6e-04
sp|O64464|PSB1_ORYSA Proteasome subunit beta type 1 (20S pr... 44 6e-04
ref|NP_191641.1| (NM_115946) proteasome component C5 [Arabi... 44 8e-04
dbj|BAA96839.1| (AB026568) beta 7 subunit of 20S proteasome... 44 8e-04
emb|CAA47753.1| (X67338) proteosome subunit [Arabidopsis th... 44 8e-04
gb|AAL60589.1| (AY071855) proteosome subunit LMP7/PSMB8 [On... 43 0.002
gb|AAD41426.1|AC007727_15 (AC007727) Identical to gb|Y13173... 42 0.003
ref|NP_564149.1| (NM_102021) putative 20S proteasome beta s... 42 0.003
ref|XP_082314.1| (XM_082314) Prosbeta3 [Drosophila melanoga... 42 0.004
ref|NP_179055.1| (NM_127012) unknown protein [Arabidopsis t... 41 0.005
emb|CAC82813.1| (AJ295252) proteasome subunit alpha5 [Trypa... 41 0.005
ref|NP_342244.1| (NC_002754) Proteasome subunit [Sulfolobus... 41 0.005
emb|CAA82203.1| (Z28348) Pre2p [Saccharomyces cerevisiae] 41 0.006
gb|AAF14267.1|AF142435_3 (AF142435) 20S proteasome beta-sub... 40 0.008
ref|NP_594372.1| (NC_003424) proteasome component PUP2 homo... 40 0.008
ref|NP_013618.1| (NC_001145) proteasome component Y7; Pre8p... 40 0.008
dbj|BAA22858.1| (D85572) proteasome subunit MECL1 [Mus spre... 40 0.008
ref|NP_113477.1| (NC_002753) 26S proteasome chain protein [... 40 0.008
sp|O82531|PSB1_PETHY Proteasome subunit beta type 1 (20S pr... 40 0.014
ref|NP_524115.1| (NM_079391) Proteasome 26kD subunit [Droso... 39 0.019
ref|XP_079885.1| (XM_079885) Proteasome alpha subunit [Dros... 39 0.019
sp|Q9XZG5|PSA5_TRYBB Proteasome subunit alpha type 5 (20S p... 39 0.019
sp|Q00826|PSB2_CRYNE Probable proteasome subunit beta type ... 39 0.025
ref|NP_584561.1| (NC_003229) 26S PROTEASOME BETA SUBUNIT, t... 39 0.025
sp|Q9NDA1|PSB3_TRYBB Proteasome subunit beta type 3 (20S pr... 39 0.025
gb|AAC46465.1| (U00790) proteasome subunit [Drosophila mela... 38 0.042
emb|CAD10778.1| (AJ418041) 20S proteasome subunit alpha V [... 38 0.042
ref|XP_069281.1| (XM_069281) similar to RIKEN cDNA 5730465C... 38 0.055
ref|NP_477202.1| (NM_057854) ProsMA5-P1 [Drosophila melanog... 38 0.055
sp|P52428|PSA1_ORYSA Proteasome subunit alpha type 1 (20S p... 37 0.094
gb|AAG28528.1|AF198387_1 (AF198387) 20S proteasome alpha 3 ... 37 0.094
>pdb|1G65|H Chain H, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1G65|V Chain V, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1G0U|H Chain H, A Gated Channel Into The Proteasome Core Particle
pdb|1G0U|V Chain V, A Gated Channel Into The Proteasome Core Particle
pdb|1RYP|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
pdb|1RYP|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
Length = 222
Score = 254 bits (648), Expect = 4e-67
Identities = 123/175 (70%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNC KLH ISP+IWCAGAGTAADTE T LI S +ELHSL T R+PRVV+ + +
Sbjct: 23 GPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQM 82
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQHLF+YQGHIGAYL+VAGVDPTG+HLF++HAHGSTD Y+++GSGSLAAM+V E+ W
Sbjct: 83 LKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHW 142
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTR-KRYYLTPNQNE 522
K DL+++EAIKLASDAI AG+WNDLGSGSNVDV ++ K R YLTPN E
Sbjct: 143 KQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVRE 197
>ref|NP_014800.1| (NC_001147) putative proteasome subunit; Pup1p [Saccharomyces
cerevisiae]
sp|P25043|PSB7_YEAST Proteasome component PUP1 precursor (Macropain subunit PUP1)
(Proteinase YSCE subunit PUP1) (Multicatalytic
endopeptidase complex subunit PUP1)
pir||S26996 probable multicatalytic endopeptidase complex (EC 3.4.99.46) chain
PUP1 - yeast (Saccharomyces cerevisiae)
emb|CAA43492.1| (X61189) PUP1 [Saccharomyces cerevisiae]
gb|AAC49643.1| (U55020) Pup1p [Saccharomyces cerevisiae]
emb|CAA99363.1| (Z75065) ORF YOR157c [Saccharomyces cerevisiae]
Length = 261
Score = 254 bits (648), Expect = 4e-67
Identities = 123/175 (70%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNC KLH ISP+IWCAGAGTAADTE T LI S +ELHSL T R+PRVV+ + +
Sbjct: 52 GPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQM 111
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQHLF+YQGHIGAYL+VAGVDPTG+HLF++HAHGSTD Y+++GSGSLAAM+V E+ W
Sbjct: 112 LKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHW 171
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTR-KRYYLTPNQNE 522
K DL+++EAIKLASDAI AG+WNDLGSGSNVDV ++ K R YLTPN E
Sbjct: 172 KQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVRE 226
>pdb|1FNT|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1FNT|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
Length = 232
Score = 254 bits (648), Expect = 4e-67
Identities = 123/175 (70%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNC KLH ISP+IWCAGAGTAADTE T LI S +ELHSL T R+PRVV+ + +
Sbjct: 23 GPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQM 82
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQHLF+YQGHIGAYL+VAGVDPTG+HLF++HAHGSTD Y+++GSGSLAAM+V E+ W
Sbjct: 83 LKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHW 142
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTR-KRYYLTPNQNE 522
K DL+++EAIKLASDAI AG+WNDLGSGSNVDV ++ K R YLTPN E
Sbjct: 143 KQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVRE 197
>ref|NP_594544.1| (NC_003424) putative proteasome component precursor
[Schizosaccharomyces pombe]
sp|Q09841|PSB7_SCHPO Probable proteasome subunit beta type 7 precursor
pir||S62498 probable proteasome component precursor - fission yeast
(Schizosaccharomyces pombe)
emb|CAA91242.1| (Z64354) putative proteasome component precursor
[Schizosaccharomyces pombe]
Length = 267
Score = 248 bits (632), Expect = 3e-65
Identities = 117/172 (68%), Positives = 142/172 (82%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPI+ADKNC+KLH ISP IWCAGAGTAADTEF T++ISS +ELHSL T RKPRVVT +T+
Sbjct: 58 GPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTM 117
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQHLFRYQGHIGAYLV+ G D G HLFT+ AHGS+DKLPYV +GSGSLAA+SV ET++
Sbjct: 118 LKQHLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKY 177
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PDL + EA++L +AI AG++NDLGSGSN D+ +I +K T R Y PN+
Sbjct: 178 QPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEEKATPYRGYSKPNE 229
>dbj|BAA19146.1| (AB000540) proteasome component PUP1 precursor [Schizosaccharomyces
pombe]
Length = 258
Score = 248 bits (632), Expect = 3e-65
Identities = 117/172 (68%), Positives = 142/172 (82%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPI+ADKNC+KLH ISP IWCAGAGTAADTEF T++ISS +ELHSL T RKPRVVT +T+
Sbjct: 49 GPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTM 108
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQHLFRYQGHIGAYLV+ G D G HLFT+ AHGS+DKLPYV +GSGSLAA+SV ET++
Sbjct: 109 LKQHLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKY 168
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PDL + EA++L +AI AG++NDLGSGSN D+ +I +K T R Y PN+
Sbjct: 169 QPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEEKATPYRGYSKPNE 220
>ref|NP_002790.1| (NM_002799) proteasome (prosome, macropain) subunit, beta type, 7;
Z [Homo sapiens]
sp|Q99436|PSB7_HUMAN Proteasome subunit beta type 7 precursor (Proteasome suubunit Z)
(Macropain chain Z) (Multicatalytic endopeptidase
complex chain Z)
dbj|BAA07238.1| (D38048) proteasome subunit z [Homo sapiens]
Length = 277
Score = 234 bits (596), Expect = 4e-61
Identities = 112/172 (65%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKNC K+H+ISP I+C GAGTAADT+ TT LISS LELHSLSTGR PRVVT +
Sbjct: 66 GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRM 125
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 126 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA L S+AI AG++NDLGSGSN+D+ +I+ +K R Y PN+
Sbjct: 186 RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNK 237
>ref|NP_445984.1| (NM_053532) proteasome (prosome, macropain) subunit, beta type, 7
[Rattus norvegicus]
sp|Q9JHW0|PSB7_RAT Proteasome subunit beta type 7 precursor (Proteasome suubunit Z)
(Macropain chain Z) (Multicatalytic endopeptidase
complex chain Z)
gb|AAF97811.1|AF285103_1 (AF285103) proteasome z subunit [Rattus norvegicus]
Length = 277
Score = 234 bits (596), Expect = 4e-61
Identities = 112/172 (65%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKNC K+H+ISP I+C GAGTAADT+ TT LISS LELHSL+TGR PRVVT +
Sbjct: 66 GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRM 125
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 126 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA KL S+AI AG++NDLGSGSN+D+ +I+ K R Y PN+
Sbjct: 186 RPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNK 237
>gb|AAH00509.1|AAH00509 (BC000509) proteasome (prosome, macropain) subunit, beta type, 7
[Homo sapiens]
Length = 277
Score = 234 bits (596), Expect = 4e-61
Identities = 112/172 (65%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKNC K+H+ISP I+C GAGTAADT+ TT LISS LELHSLSTGR PRVVT +
Sbjct: 66 GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRM 125
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 126 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA L S+AI AG++NDLGSGSN+D+ +I+ +K R Y PN+
Sbjct: 186 RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNK 237
>gb|AAH17116.1|AAH17116 (BC017116) proteasome (prosome, macropain) subunit, beta type, 7
[Homo sapiens]
Length = 270
Score = 234 bits (596), Expect = 4e-61
Identities = 112/172 (65%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKNC K+H+ISP I+C GAGTAADT+ TT LISS LELHSLSTGR PRVVT +
Sbjct: 59 GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRM 118
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 119 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 178
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA L S+AI AG++NDLGSGSN+D+ +I+ +K R Y PN+
Sbjct: 179 RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNK 230
>dbj|BAB22385.1| (AK002823) data source:MGD, source key:MGI:107637,
evidence:ISS~proteasome (prosome, macropain) subunit,
beta type 7~putative [Mus musculus]
Length = 277
Score = 233 bits (593), Expect = 9e-61
Identities = 111/172 (64%), Positives = 140/172 (80%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKNC K+H+ISP I+C GAGTAADT+ TT LISS LELHSL+TGR PRVVT +
Sbjct: 66 GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRM 125
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 126 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA KL S+AI AG++NDLGSGSN+D+ +I+ K R + PN+
Sbjct: 186 RPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPFSVPNE 237
>ref|NP_035317.1| (NM_011187) proteasome (prosome, macropain) subunit, beta type 7
[Mus musculus]
sp|P70195|PSB7_MOUSE Proteasome subunit beta type 7 precursor (Proteasome suubunit Z)
(Macropain chain Z) (Multicatalytic endopeptidase
complex chain Z)
pir||JC6122 proteasome beta-type Z chain (EC 3.4.-.-) - mouse
dbj|BAA12017.1| (D83585) proteasome Z subunit precursor [Mus musculus]
emb|CAA71824.1| (Y10874) proteasome subunti MC14 [Mus musculus]
dbj|BAA22857.1| (D85570) PSMB7 [Mus musculus]
dbj|BAB29085.1| (AK013961) data source:MGD, source key:MGI:107637,
evidence:ISS~proteasome (prosome, macropain) subunit,
beta type 7~putative [Mus musculus]
Length = 277
Score = 232 bits (592), Expect = 1e-60
Identities = 111/172 (64%), Positives = 140/172 (80%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKNC K+H+ISP I+C GAGTAADT+ TT LISS LELHSL+TGR PRVVT +
Sbjct: 66 GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRM 125
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 126 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA KL S+AI AG++NDLGSGSN+D+ +I+ K R + PN+
Sbjct: 186 RPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPFSVPNK 237
>dbj|BAB28354.1| (AK012613) data source:MGD, source key:MGI:107637,
evidence:ISS~proteasome (prosome, macropain) subunit,
beta type 7~putative [Mus musculus]
Length = 277
Score = 231 bits (588), Expect = 3e-60
Identities = 110/172 (63%), Positives = 139/172 (79%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKNC K+H+ISP I+C GAGTAADT+ TT LISS LE HSL+TGR PRVVT +
Sbjct: 66 GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLEFHSLTTGRLPRVVTANRM 125
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 126 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA KL S+AI AG++NDLGSGSN+D+ +I+ K R + PN+
Sbjct: 186 RPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPFSVPNK 237
>gb|AAD53521.1|AF155581_1 (AF155581) proteasome subunit beta 7 [Danio rerio]
Length = 275
Score = 230 bits (586), Expect = 6e-60
Identities = 113/171 (66%), Positives = 136/171 (79%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G IVADKNC K+HYISP I+C GAGTAADTE TT +ISS LELHSLSTGR PRV T +
Sbjct: 64 GMIVADKNCSKIHYISPNIYCCGAGTAADTEMTTQIISSNLELHSLSTGRLPRVATANRM 123
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 124 LKQMLFRYQGYIGAALVLGGVDCTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRY 183
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPN 513
+PD+ +++A L DAI AG++NDLGSGSN+DV +IT K YL P+
Sbjct: 184 RPDMEEEDAKSLVRDAIAAGIFNDLGSGSNIDVCVITKGKVD----YLRPH 230
>gb|AAH08414.1|AAH08414 (BC008414) proteasome (prosome, macropain) subunit, beta type, 7
[Homo sapiens]
Length = 277
Score = 229 bits (584), Expect = 1e-59
Identities = 111/172 (64%), Positives = 139/172 (80%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +VADKN K+H+ISP I+C GAGTAADT+ TT LISS LELHSLSTGR PRVVT +
Sbjct: 66 GMVVADKNRSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRM 125
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQG+IGA LV+ GVD TG HL++++ HGSTDKLPYVTMGSGSLAAM+VFE ++
Sbjct: 126 LKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKF 185
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+PD+ ++EA L S+AI AG++NDLGSGSN+D+ +I+ +K R Y PN+
Sbjct: 186 RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNK 237
>dbj|BAA96835.1| (AB026564) beta 2 subunit of 20S proteasome [Oryza sativa (japonica
cultivar-group)]
Length = 272
Score = 227 bits (579), Expect = 4e-59
Identities = 109/171 (63%), Positives = 136/171 (78%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNCEK+HY++P I+C GAGTAADTE T ++SSQL+LH +TGR+ RVVT +TL
Sbjct: 61 GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTSLTL 120
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK HLF YQGH+ A LV+ GVD TG HL TV+ HGSTD LP+ TMGSGSLAAMSVFE+++
Sbjct: 121 LKSHLFSYQGHVSAALVLGGVDVTGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKY 180
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPN 513
K L+++E I+L ++AI G++NDLGSGSNVDV +IT KT R + PN
Sbjct: 181 KEGLTREEGIQLVAEAIRGGIFNDLGSGSNVDVCVITKGKTEYLRNHQLPN 231
>gb|AAF49685.1| (AE003532) Prosbeta2 gene product [Drosophila melanogaster]
gb|AAK93400.1| (AY051976) LD44234p [Drosophila melanogaster]
Length = 272
Score = 227 bits (578), Expect = 5e-59
Identities = 109/172 (63%), Positives = 133/172 (76%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIV+DKNC K+HY++ I+C GAGTAADTE TT LISSQLELH L T R+ RVV T+
Sbjct: 62 GPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTM 121
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQGHI A LV+ GVD TG H++++H HGS+DKLPY TMGSGSLAAM+VFE++W
Sbjct: 122 LKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRW 181
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
KPDLS++E KL DAI +GV+NDLGSGSN+D+ +I R Y N+
Sbjct: 182 KPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSVEYLRNYELANK 233
>emb|CAA73620.1| (Y13177) multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 218
Score = 225 bits (573), Expect = 2e-58
Identities = 107/171 (62%), Positives = 132/171 (76%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNCEK+HY++P I+C GAGTAADTE T ++SSQL LH TGR RVVT +TL
Sbjct: 6 GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTL 65
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK+HLF YQGH+ A LV+ GVD TG HL T++ HGSTD LP+ TMGSGSLAAMSVFE ++
Sbjct: 66 LKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKY 125
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPN 513
K L++ E IKL ++AI +G++NDLGSGSNVD+ +IT R Y+ PN
Sbjct: 126 KEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKGHKEYLRNYMEPN 176
>ref|NP_198874.1| (NM_123422) 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
gb|AAC32067.1| (AF043531) 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
dbj|BAB08528.1| (AB009052) 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length = 274
Score = 225 bits (573), Expect = 2e-58
Identities = 107/171 (62%), Positives = 132/171 (76%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNCEK+HY++P I+C GAGTAADTE T ++SSQL LH TGR RVVT +TL
Sbjct: 62 GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTL 121
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK+HLF YQGH+ A LV+ GVD TG HL T++ HGSTD LP+ TMGSGSLAAMSVFE ++
Sbjct: 122 LKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKY 181
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPN 513
K L++ E IKL ++AI +G++NDLGSGSNVD+ +IT R Y+ PN
Sbjct: 182 KEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKGHKEYLRNYMEPN 232
>emb|CAA73621.1| (Y13178) multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 273
Score = 224 bits (570), Expect = 4e-58
Identities = 105/171 (61%), Positives = 132/171 (76%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNCEK+HY++P I+C GAGTAADTE T ++SSQL LH TGR RV+T +TL
Sbjct: 62 GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTL 121
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK+HLF YQGH+ A LV+ GVD TG HL T++ HGSTD LP+ TMGSGSLAAMSVFE ++
Sbjct: 122 LKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKY 181
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPN 513
K L++ E IKL +++I +G++NDLGSGSNVD+ +IT R Y+ PN
Sbjct: 182 KEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPN 232
>ref|NP_566818.1| (NM_113658) 20S proteasome beta subunit (PBB1) [Arabidopsis
thaliana]
gb|AAC32066.1| (AF043530) 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
dbj|BAA95719.1| (AB024028) 20S proteasome beta subunit; multicatalytic
endopeptidase [Arabidopsis thaliana]
Length = 273
Score = 224 bits (570), Expect = 4e-58
Identities = 105/171 (61%), Positives = 132/171 (76%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNCEK+HY++P I+C GAGTAADTE T ++SSQL LH TGR RV+T +TL
Sbjct: 62 GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTL 121
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK+HLF YQGH+ A LV+ GVD TG HL T++ HGSTD LP+ TMGSGSLAAMSVFE ++
Sbjct: 122 LKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKY 181
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPN 513
K L++ E IKL +++I +G++NDLGSGSNVD+ +IT R Y+ PN
Sbjct: 182 KEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPN 232
>ref|NP_524076.1| (NM_079352) Proteasome beta2 subunit; anon-fast-evolving-1E6;
anon-fast-evolving-1G6 [Drosophila melanogaster]
gb|AAB82570.1| (AF025791) 20S proteasome beta2 subunit [Drosophila melanogaster]
Length = 272
Score = 223 bits (568), Expect = 7e-58
Identities = 108/172 (62%), Positives = 131/172 (75%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIV+DKNC K+HY++ I+C GAGTAADTE TT LISSQLELH L T R+ RVV T+
Sbjct: 62 GPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTM 121
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQGHI A LV+ GVD TG H++++H HGS+DKLPY TMGSGSLAAM+VFE++W
Sbjct: 122 LKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRW 181
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
KPDLS++E KL DA GV+NDLGSGSN+D+ +I R Y N+
Sbjct: 182 KPDLSEEEGKKLVRDADPTGVFNDLGSGSNIDLCVIRKGSVEYLRNYELANK 233
>gb|AAB82571.1| (AF025792) 20S proteasome beta2 subunit [Drosophila melanogaster]
Length = 272
Score = 223 bits (568), Expect = 7e-58
Identities = 108/172 (62%), Positives = 131/172 (75%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIV+DKNC K+HY++ I+C GAGTAADTE TT LISSQLELH L T R+ RVV T+
Sbjct: 62 GPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTM 121
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LKQ LFRYQGHI A LV+ GVD TG H++++H HGS+DKLPY TMGSGSLAAM+VFE++W
Sbjct: 122 LKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRW 181
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
KPDLS++E KL DA GV+NDLGSGSN+D+ +I R Y N+
Sbjct: 182 KPDLSEEEGKKLVRDADPTGVFNDLGSGSNIDLCVIRKGSVEYLRNYELANK 233
>emb|CAA05209.1| (AJ002142) proteasome Z subunit [Ciona intestinalis]
Length = 276
Score = 211 bits (536), Expect = 4e-54
Identities = 103/168 (61%), Positives = 128/168 (75%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
IVADKNC K+HYI+P I+C GAGTAADTE TT +ISS L+L +TGR RV T +LK
Sbjct: 65 IVADKNCSKIHYIAPNIYCCGAGTAADTEMTTQMISSNLQLLRYNTGRPTRVATANRMLK 124
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
Q+L+RYQGH+ A LV+ GVD G HL+++H HGSTDKLPYVTMGSGSLAAM+ FE +KP
Sbjct: 125 QYLYRYQGHVSAALVLGGVDCNGAHLYSIHPHGSTDKLPYVTMGSGSLAAMATFEMGYKP 184
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTP 510
++ + EA+KL DA+ AG++NDLGSGSNVD+ II + K YL P
Sbjct: 185 NMKRPEAMKLVRDAVAAGIFNDLGSGSNVDLCIIGNN---MKVEYLRP 229
>gb|AAF46088.1| (AE003435) CG18341 gene product [Drosophila melanogaster]
Length = 307
Score = 187 bits (475), Expect = 4e-47
Identities = 89/157 (56%), Positives = 116/157 (73%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIV+DKNC K+H++ I+C GAGTAADTE T S++L+LH L+T R+ VV +
Sbjct: 71 GPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMM 130
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
L++ LFRYQGHIGA LV+ GVD TG L+ ++ GS DK+PY MGSG+LAAMSV E W
Sbjct: 131 LRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGW 190
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIIT 471
KPDL ++ +L +AI AGV+NDLGSGSN+D+ +IT
Sbjct: 191 KPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVIT 227
>gb|AAG16286.1|AC016024_9 (AC016024) leishmania proteasome subunit beta-2 [Leishmania major]
Length = 259
Score = 186 bits (473), Expect = 7e-47
Identities = 92/172 (53%), Positives = 123/172 (71%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G IVADK C K+HY++P I C GAGT+ADTE T ++SS L LH L TG++ RV+ +TL
Sbjct: 57 GSIVADKCCRKIHYMAPNIMCCGAGTSADTEAVTNMVSSHLALHRLETGKQSRVLEALTL 116
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK+HL+RYQGH+ A LV+ GVD G L T+ HGSTD+LP+VTMGSGS+AAM+ E +
Sbjct: 117 LKRHLYRYQGHVSAALVLGGVDVEGPFLATIAPHGSTDRLPFVTMGSGSIAAMAQLEAAY 176
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
K +++ +EA +L + AI G++ND SG+ VDV +IT KT Y TPN+
Sbjct: 177 KDNMTCEEAKELVTSAIHKGIFNDPYSGTQVDVCVITKGKTELTIGYHTPNK 228
>sp|O35955|PSBA_MOUSE Proteasome subunit beta type 10 precursor (Proteasome MECl-1)
(Macropain subunit MECl-1) (Multicatalytic endopeptidase
complex subunit MECl-1)
gb|AAB86994.1| (U77784) Lmp10 proteasome subunit [Mus musculus]
gb|AAB87637.1| (U77785) Lmp10 proteasome subunit; MECL1 [Mus musculus]
dbj|BAA22855.1| (D85561) proteasome subunit MECL1 [Mus musculus]
dbj|BAA22856.1| (D85562) proteasome subunit MECL1 [Mus musculus]
Length = 273
Score = 186 bits (472), Expect = 1e-46
Identities = 87/170 (51%), Positives = 124/170 (72%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK+CEK+H+I+P+I+C GAG AADTE TT + +S++ELH+LSTGR+PRV T +L+
Sbjct: 64 VVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILR 123
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
Q LFRYQGH+GA LVV GVD G L+ VH HGS +LP+ +GSG AA+++ E +++P
Sbjct: 124 QTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQP 183
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+++ + A +L +AI AG+ +DLGSG NVD +IT +R TP +
Sbjct: 184 NMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQRALSTPTE 233
>gb|AAH04730.1|AAH04730 (BC004730) proteasome (prosome, macropain) subunit, beta type 10
[Mus musculus]
Length = 273
Score = 186 bits (472), Expect = 1e-46
Identities = 87/170 (51%), Positives = 124/170 (72%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK+CEK+H+I+P+I+C GAG AADTE TT + +S++ELH+LSTGR+PRV T +L+
Sbjct: 64 VVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILR 123
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
Q LFRYQGH+GA LVV GVD G L+ VH HGS +LP+ +GSG AA+++ E +++P
Sbjct: 124 QTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQP 183
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+++ + A +L +AI AG+ +DLGSG NVD +IT +R TP +
Sbjct: 184 NMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQRALSTPTE 233
>ref|NP_038668.1| (NM_013640) proteasome (prosomome, macropain) subunit, beta type 10
[Mus musculus]
emb|CAA71825.1| (Y10875) proteasome subnuit MECL-1 [Mus musculus]
Length = 273
Score = 185 bits (470), Expect = 2e-46
Identities = 87/170 (51%), Positives = 124/170 (72%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK+CEK+H+I+P+I+C GAG AADTE TT + +S++ELH+LSTGR+PRV T +L+
Sbjct: 64 VVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILR 123
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
Q LFRYQGH+GA LVV GVD G L+ VH HGS +LP+ +GSG AA+++ E +++P
Sbjct: 124 QTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQP 183
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+++ + A +L +AI AG+ +DLGSG NVD +IT +R TP +
Sbjct: 184 NMTLELAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQRALSTPTE 233
>ref|NP_002792.1| (NM_002801) proteasome (prosome, macropain) subunit, beta type, 10;
Proteosome subunit MECL1 [Homo sapiens]
sp|P40306|PSBA_HUMAN Proteasome subunit beta type 10 precursor (Proteasome MECl-1)
(Macropain subunit MECl-1) (Multicatalytic endopeptidase
complex subunit MECl-1)
pir||I38135 multicatalytic endopeptidase complex (EC 3.4.99.46) beta chain
MECL-1 - human
emb|CAA50709.1| (X71874) proteasome-like subunit MECL-1 [Homo sapiens]
emb|CAA73982.1| (Y13640) proteasome subunit MECl-1 [Homo sapiens]
gb|AAH17198.1|AAH17198 (BC017198) proteasome (prosome, macropain) subunit, beta type, 10
[Homo sapiens]
Length = 273
Score = 184 bits (467), Expect = 4e-46
Identities = 88/173 (50%), Positives = 124/173 (70%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK+CEK+H+I+P+I+C GAG AAD E TT +++S++ELH+LSTGR+PRV T +L+
Sbjct: 64 VVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILR 123
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
Q LFRYQGH+GA L+V GVD TG L+ VH HGS +LP+ +GSG AA++V E +++P
Sbjct: 124 QTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQP 183
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQNEP 525
+++ + A L +A+ AG+ DLGSG NVD +IT KT K + EP
Sbjct: 184 NMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVIT--KTGAKLLRTLSSPTEP 234
>gb|AAD53517.1|AF155577_1 (AF155577) proteasome subunit beta 12 [Danio rerio]
Length = 279
Score = 182 bits (461), Expect = 2e-45
Identities = 87/173 (50%), Positives = 125/173 (71%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK C K+HYI+P I+C GAGTAADTE TT ++SS L + S+++GR PRVV + +++
Sbjct: 67 VVADKMCAKIHYIAPNIYCCGAGTAADTEKTTDMLSSNLTIFSMNSGRNPRVVMAVNIIQ 126
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
LFRY+G IGA L++ GVD TG+HL+TV +GS DK+PY+ MGSG LAAM + E ++K
Sbjct: 127 DMLFRYRGMIGANLILGGVDCTGSHLYTVGPYGSMDKVPYLAMGSGDLAAMGILEDRFKV 186
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQNEP 525
++ ++A L SDAI AG+ DLGSG+N+D+ +IT + Y+ P++ P
Sbjct: 187 NMDLEQAKALVSDAIQAGIMCDLGSGNNIDLCVITKEGVD----YIRPHKESP 235
>emb|CAC13118.1| (AJ271723) low molecular mass polypeptide subunit PSMB10 [Takifugu
rubripes]
Length = 275
Score = 181 bits (460), Expect = 2e-45
Identities = 87/165 (52%), Positives = 119/165 (71%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK C K+HYI+P I+C GAGTAADT+ TT L+SS L + SL++GRKPRVV + +L+
Sbjct: 66 VVADKMCAKIHYIAPNIYCCGAGTAADTQKTTDLLSSNLTIFSLNSGRKPRVVMAVNILQ 125
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
L+RY G IGA L++ GVD TG HL+ V +GS DK+PY+TMGSG LAA+ + E +K
Sbjct: 126 DTLYRYHGQIGANLILGGVDCTGNHLYKVGPYGSVDKVPYLTMGSGDLAALGILEDGFKH 185
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYY 501
D+ + A +L AI AG+ +DLGSG+N+D+ +IT D+ R Y
Sbjct: 186 DMEVERATELVRLAIHAGIMSDLGSGNNIDICVITRDRVDYIRPY 230
>emb|CAA10208.1| (AJ130820) proteasome subunit beta-2 [Trypanosoma brucei
rhodesiense]
Length = 255
Score = 181 bits (458), Expect = 4e-45
Identities = 91/174 (52%), Positives = 120/174 (68%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G IVADK C+K+HY++P I C GAGTAADTE T + ++ L LH L TG++ RV +TL
Sbjct: 52 GSIVADKRCKKIHYMAPNIMCCGAGTAADTEAVTNMTAANLTLHRLGTGKQSRVSEALTL 111
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK+HL+RYQGH+ A LV+ GVD G L TV HGSTD+LP+V MGSGS+AAM+ ET +
Sbjct: 112 LKRHLYRYQGHVSAALVLGGVDVGGAFLATVAPHGSTDRLPFVAMGSGSIAAMAALETGY 171
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQNE 522
K +L+ +EA +L AI G++ND SG+ VD+ +IT KT Y PN +
Sbjct: 172 KENLTLEEAKQLVVSAIHKGIFNDPYSGTQVDLCVITKAKTEMLIGYDKPNDRK 225
>dbj|BAB83847.1| (AB073377) MECL1~partially supported by GENSCAN and GrailEXP
[Oryzias latipes]
Length = 273
Score = 177 bits (449), Expect = 4e-44
Identities = 86/155 (55%), Positives = 117/155 (75%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK C K+HYISP I+C GAGTAADTE TT L+SS L + SL++GR PRVV + +L+
Sbjct: 66 VVADKMCAKIHYISPNIYCCGAGTAADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQ 125
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
L+RY G IGA L++ GVD TG HL+TV +GS +K+PY+ MGSG LAA+ + E ++K
Sbjct: 126 DMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKH 185
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIIT 471
DL ++A +L DAI AG+ +DLGSG+N+D+ +IT
Sbjct: 186 DL--EKAKELVRDAIHAGIMSDLGSGNNIDICVIT 218
>gb|AAL82481.1| (AF473832) proteasome subunit LMP10 [Bos taurus]
Length = 216
Score = 176 bits (445), Expect = 1e-43
Identities = 84/170 (49%), Positives = 120/170 (70%)
Frame = +1
Query: 7 IVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTLLK 186
+VADK CEK+H+I+P+I+C GAG AAD E TT + +S +ELH+LSTGR+ RV T +L+
Sbjct: 8 VVADKICEKMHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLR 67
Query: 187 QHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQWKP 366
Q LFRYQG++GA L+V GVD TG L++VH HGS +LP+ +GSG AA++V E +++P
Sbjct: 68 QTLFRYQGYVGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQP 127
Query: 367 DLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYYLTPNQ 516
+++ + A +L +AI AG+ DLGSG NVD +IT R +P +
Sbjct: 128 NIALEAAQELLVEAITAGILGDLGSGGNVDACVITAAGAKMLRALSSPTK 177
>emb|CAC43321.1| (AJ291736) putative beta proteasome subunit [Nicotiana tabacum]
Length = 205
Score = 172 bits (435), Expect = 2e-42
Identities = 79/124 (63%), Positives = 100/124 (79%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GPIVADKNCEK+HY++P I+C GAGTAADTE T ++SSQL+LH TGR+ RVVT +TL
Sbjct: 63 GPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLKLHRFHTGRESRVVTALTL 122
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
LK HLF YQG++ A LV+ GVD TG HL T++ HGSTD LPY TMGS SLAA+++FE+++
Sbjct: 123 LKTHLFSYQGYVSAALVLGGVDVTGPHLXTIYPHGSTDTLPYATMGSSSLAAIAIFESKY 182
Query: 361 KPDL 372
+ L
Sbjct: 183 REGL 186
>emb|CAB96046.1| (AJ404677) proteasome beta 2 subunit [Giardia intestinalis]
Length = 238
Score = 169 bits (428), Expect = 1e-41
Identities = 81/166 (48%), Positives = 114/166 (67%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GP+V +KN +KL I+ Q++ AGAGTAADT + +S L LH+ TGRKP V + + L
Sbjct: 55 GPVVMNKNKKKLVCINEQMYMAGAGTAADTAAVGRMAASSLRLHAYKTGRKPLVQSAVKL 114
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
+ HLFRY G++ AY+++AGVD G HL ++ AHGS P+VT GSG LAA S+ E W
Sbjct: 115 ISDHLFRYMGYVSAYVIIAGVDYKGAHLCSIDAHGSITAQPFVTDGSGRLAAQSMLEKHW 174
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRY 498
KPD+ + +A++ A A+ AGV+NDLGSGS VD+ I+ D T+ ++
Sbjct: 175 KPDMEENDAVECACKAVEAGVFNDLGSGSGVDLVILRLDGTSELKH 220
>ref|NP_493271.1| (NM_060870) Proteasome A-type and B-type [Caenorhabditis elegans]
pir||T19983 hypothetical protein C47B2.4 - Caenorhabditis elegans
emb|CAB16855.1| (Z99709) predicted using Genefinder~contains similarity to Pfam
domain: PF00227 (Proteasome A-type and B-type),
Score=124.3, E-value=7.2e-34, N=1~cDNA EST EMBL:Z14478
comes from this gene~cDNA EST EMBL:T00040 comes from
this gene~cDNA EST EMBL:T02028 c>
Length = 277
Score = 159 bits (402), Expect = 1e-38
Identities = 77/164 (46%), Positives = 111/164 (66%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G I+ADK+CEK+H ++ I+ GAGTAAD + T ++S L L L+TGRK RV+T +
Sbjct: 69 GNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQ 128
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
KQHLF YQG+IGAYL++ GVDPTG HL+ A+G+T P+ GSGS AA+++ E +
Sbjct: 129 AKQHLFNYQGYIGAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDF 188
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
K D+++ EA KL A+ AG+ D SG+++++ II +T K
Sbjct: 189 KVDMTKDEAEKLVQRALEAGMHGDNASGNSLNLVIIEPSETVFK 232
>ref|NP_596997.1| (NC_003238) PROTEASOME BETA-TYPE SUBUNIT (MACROPAIN SUBUNIT PUP1)
[Encephalitozoon cuniculi]
emb|CAD27045.1| (AL590451) PROTEASOME BETA-TYPE SUBUNIT (MACROPAIN SUBUNIT PUP1)
[Encephalitozoon cuniculi]
Length = 227
Score = 140 bits (354), Expect = 5e-33
Identities = 71/156 (45%), Positives = 100/156 (63%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
GP+V+DKNC K+H I+ +I C GAGTAAD + S +L L R P V +
Sbjct: 29 GPVVSDKNCVKIHQITDKIMCCGAGTAADASRVARMASRELRLFQNKYLRLPLVSHFRKV 88
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
QHL +Y G IGA L+V G+D G HL+ +H HGS + +V++GSGSL A++ E+++
Sbjct: 89 CTQHLHKYGGGIGAALIVGGIDSEGCHLYEIHPHGSENSALFVSLGSGSLGAIATLESRY 148
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAII 468
+ + + EAI LA DA+ AG+ NDL SGSN+DV +I
Sbjct: 149 RA-MDKDEAIDLACDAVKAGILNDLYSGSNIDVCVI 183
>gb|AAL68040.1| (AY075170) AT05866p [Drosophila melanogaster]
Length = 322
Score = 136 bits (343), Expect = 9e-32
Identities = 69/160 (43%), Positives = 99/160 (61%), Gaps = 1/160 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTG-RKPRVVTCMT 177
G IV K C K+ + I+ AGAGTA DT+ L +QLELH ++TG RK V
Sbjct: 72 GGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQ 131
Query: 178 LLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
+++Q LFR+ G+I A +++ G D TG HLF + GSTD P+ ++GSG +MS+ E++
Sbjct: 132 MIRQLLFRFNGNIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESR 191
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTD 477
W DLS++ A LA DA+ AG+ NDL SG V + ++ D
Sbjct: 192 WSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRCD 231
>ref|NP_113181.1| (NC_002751) 26S proteasome SU [Guillardia theta]
gb|AAK39749.1|AF083031_106 (AF083031) 26S proteasome SU [Guillardia theta]
Length = 236
Score = 121 bits (304), Expect = 3e-27
Identities = 60/165 (36%), Positives = 98/165 (59%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G I D +C+K+H+I I GAGT+AD + + + +L ++ + C +
Sbjct: 57 GKITNDSSCKKIHFIGNNIGICGAGTSADIQNIINYLKININFLNLEKLKETNLEECTKI 116
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
++ LF Y+G I A L++ G D G +L++++ GS DK +++MGSGS AAM++ E +
Sbjct: 117 IQNFLFNYKGMISAALIIGGFDYYGLNLYSIYPDGSMDKNFFISMGSGSFAAMTILEKNY 176
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKR 495
+S + AI ++ AILAGV+NDLGSG +VD+ +I+ K R
Sbjct: 177 NEIMSLESAINISKQAILAGVYNDLGSGGSVDLYVISKSKNLMYR 221
>gb|AAK08097.1| (AF337892) putative 20S proteasome beta2 subunit [Ceratitis
capitata]
Length = 83
Score = 115 bits (288), Expect = 2e-25
Identities = 52/80 (65%), Positives = 67/80 (83%)
Frame = +1
Query: 160 VVTCMTLLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAM 339
VV TLLKQ LFRYQGHI A LV+ GVD TG++++ +H HGSTDKLPY TMGSGSLAAM
Sbjct: 4 VVAANTLLKQFLFRYQGHISAALVLGGVDKTGSYIYCIHPHGSTDKLPYATMGSGSLAAM 63
Query: 340 SVFETQWKPDLSQKEAIKLA 399
SVFE++WKPD++++E +++
Sbjct: 64 SVFESRWKPDMTEEEGKRVS 83
>gb|AAF52066.1| (AE003603) CG12161 gene product [Drosophila melanogaster]
Length = 206
Score = 99.8 bits (247), Expect = 1e-20
Identities = 48/115 (41%), Positives = 73/115 (62%), Gaps = 1/115 (0%)
Frame = +1
Query: 136 LSTG-RKPRVVTCMTLLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVT 312
++TG RK V +++Q LFR+ G+I A +++ G D TG HLF + GSTD P+ +
Sbjct: 1 MNTGFRKVPVCCANQMIRQLLFRFNGNIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTS 60
Query: 313 MGSGSLAAMSVFETQWKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTD 477
+GSG +MS+ E++W DLS++ A LA DA+ AG+ NDL SG V + ++ D
Sbjct: 61 IGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRCD 115
>emb|CAA73617.1| (Y13174) multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 119
Score = 96.3 bits (238), Expect = 1e-19
Identities = 45/78 (57%), Positives = 59/78 (74%)
Frame = +1
Query: 280 HGSTDKLPYVTMGSGSLAAMSVFETQWKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDV 459
HGSTD LP+ TMGSGSLAAMSVFE ++K L++ E IKL +++I +G++NDLGSGSNVD+
Sbjct: 1 HGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDI 60
Query: 460 AIITTDKTTRKRYYLTPN 513
+IT R Y+ PN
Sbjct: 61 CVITKGNKEYLRNYMEPN 78
>gb|AAD45962.1|U44425_1 (U44425) protein serine kinase c17 [Homo sapiens]
Length = 143
Score = 89.0 bits (219), Expect = 2e-17
Identities = 46/82 (56%), Positives = 57/82 (69%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G ++ D C K+H+ISP I+C GAGTA DT+ TT LISS LELHSLSTGR PRVVT +
Sbjct: 62 GWLLLDNGCSKIHFISPNIYCCGAGTA-DTDMTTQLISSNLELHSLSTGRLPRVVTAKSD 120
Query: 181 LKQHLFRYQGHIGAYLVVAGVD 246
+ F+ +GA LV+ GVD
Sbjct: 121 AEADAFQVSRLLGAALVLGGVD 142
>ref|NP_596295.1| (NC_003423) proteasome component precursor [Schizosaccharomyces
pombe]
sp|O43063|PSB6_SCHPO Probable proteasome subunit beta type 6 precursor
pir||T40487 proteasome component precursor - fission yeast
(Schizosaccharomyces pombe)
emb|CAA16832.1| (AL021730) 20S proteasome component (beta 1) [Schizosaccharomyces
pombe]
Length = 226
Score = 87.0 bits (214), Expect = 8e-17
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +A++ +KL ++ IWC +G+AADT+ L+ L ++ + G P V T TL
Sbjct: 47 GAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATL 106
Query: 181 LKQHLFRYQGHIGAYLVVAGVD-PTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
+ ++ + + A L+VAG D TG ++++ GS K P GSGS +
Sbjct: 107 ASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDAN 166
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
++ +++Q+EA++ +A+ + D SG + + I+ D RK
Sbjct: 167 FRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGMERK 211
>gb|AAD53036.1|AF115539_1 (AF115539) proteasome delta [Oncorhynchus mykiss]
Length = 223
Score = 81.6 bits (200), Expect = 3e-15
Identities = 49/165 (29%), Positives = 85/165 (50%), Gaps = 1/165 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +A++ +KL I +I+C +G+AADT+ +++ QL HS+ P V T L
Sbjct: 46 GAYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADVVTYQLGFHSIELDEAPLVQTAANL 105
Query: 181 LKQHLFRYQGHIGAYLVVAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
K +RY+ + A ++VAG D G ++TV G + P GSGS ++
Sbjct: 106 FKASCYRYREELMAGIIVAGWDKRRGGQVYTVPVGGMLVRQPVSVGGSGSTYIYGYMDSN 165
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
+KP++++ + ++L S A+ + D SG V +A I+ R+
Sbjct: 166 YKPNMTKDQCLRLVSGALSLAMERDGSSGGVVRLAAISETGVDRQ 210
>ref|NP_069317.1| (NC_000917) proteasome, subunit beta (psmB) [Archaeoglobus
fulgidus]
sp|O29769|PRCB_ARCFU PROTEASOME BETA SUBUNIT (MULTICATALYTIC ENDOPEPTIDASE COMPLEX BETA
SUBUNIT)
sp|Q9P996|PSMB_ARCFU Proteasome beta subunit precursor (Multicatalytic endopeptidase
complex beta subunit)
pir||A69310 proteasome, subunit beta (psmB) homolog - Archaeoglobus fulgidus
gb|AAB90757.1| (AE001071) proteasome, subunit beta (psmB) [Archaeoglobus fulgidus]
Length = 213
Score = 81.3 bits (199), Expect = 4e-15
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +A K +K++ I+ ++ AG+ D +F +I + L+ + RKP V TL
Sbjct: 34 GNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATL 93
Query: 181 LKQHL--FRYQGHIGAYLVVAGVDPTGTHLFTVHA-HGSTDKLPYVTMGSGSLAAMSVFE 351
L +RY ++ L++ G+D G ++++ G+ ++ V GSGSL A V E
Sbjct: 94 TSNLLNSYRYFPYL-VQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLE 152
Query: 352 TQWKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDK 480
++ P++ EA++LA AI + + D SG +DV IT D+
Sbjct: 153 DRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDE 195
>dbj|BAA19761.1| (D87690) proteasome subunit Y [Lethenteron japonicum]
Length = 231
Score = 79.7 bits (195), Expect = 1e-14
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G VA++ +KL + +I+C +G+AADT+ +++ QL HS+ P V T L
Sbjct: 54 GSYVANRVTDKLTPVHDRIFCCRSGSAADTQAIADVVNYQLGFHSIEMEEMPLVHTAANL 113
Query: 181 LKQHLFRYQGHIGAYLVVAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
K + +RY+ + A ++VAG D G ++TV G + P+ GSGS ++
Sbjct: 114 FKDYCYRYREELMAGIIVAGWDKRKGGQVYTVPLGGMLVRQPFSVGGSGSTYIYGFVDSN 173
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
+K ++++E ++ + A+ + D SG + +A IT R+
Sbjct: 174 YKTGMTKEECMEFTAKALSLAMSRDGSSGGVIRMAAITAGGVERR 218
>ref|NP_571466.1| (NM_131391) proteasome (prosome, macropain) subunit, beta type, 9a;
large multifunctional protease 2; proteosome (prosome,
macropain) subunit, beta type 9 [Danio rerio]
gb|AAD53519.1|AF155579_1 (AF155579) proteasome subunit beta 9A [Danio rerio]
Length = 218
Score = 79.3 bits (194), Expect = 2e-14
Identities = 46/164 (28%), Positives = 81/164 (49%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G V ++ KL + +I+CA +G+AAD + +++ QL++HS+ P V + TL
Sbjct: 42 GESVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEIVNYQLDVHSIEVEDDPLVCSAATL 101
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
+K ++Y+ + A+L+VAG D G G K P+ GSGS + ++
Sbjct: 102 VKNISYKYKEELSAHLIVAGWDKKGGGQVYATLSGLLTKQPFAIGGSGSFYINGFVDAEY 161
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
K +++++E + +A+ + D SG V I D T K
Sbjct: 162 KKNMTKRECQEFVVNALTLAMGRDGSSGGVAYVVTIDKDGTEEK 205
>ref|NP_571227.1| (NM_131152) proteasome (prosome, macropain) subunit, beta type, 6;
proteasome subunit Y [Danio rerio]
gb|AAB87681.1| (AF032392) proteasome subunit Y [Danio rerio]
Length = 223
Score = 77.8 bits (190), Expect = 5e-14
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +A++ +KL I +I+C +G+AADT+ ++ QL HS+ P V T +L
Sbjct: 46 GAYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADAVTYQLGFHSIELDEAPLVQTAASL 105
Query: 181 LKQHLFRYQGHIGAYLVVAGVD-PTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
+ +RY+ + A ++VAG D G ++TV G + P GSGS ++
Sbjct: 106 FRDMCYRYREELMAGIIVAGWDRRRGGQVYTVPVGGMLTRQPVSVGGSGSSYIYGYVDSN 165
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
++ +S++E +K + A+ + D SG V +A+I+ R+
Sbjct: 166 YRSGMSKEECLKFTAGALTLPMERDGSSGGVVRLAVISEQGVERQ 210
>gb|AAG43434.1|AF184932_1 (AF184932) low molecular mass protein 2 [Salmo salar]
gb|AAG43435.1|AF184933_1 (AF184933) low molecular mass protein 2 [Salmo salar]
gb|AAG43436.1|AF184934_1 (AF184934) low molecular mass protein 2 [Salmo salar]
gb|AAG43437.1|AF184935_1 (AF184935) low molecular mass protein 2 [Salmo salar]
gb|AAG43438.1|AF184936_1 (AF184936) low molecular mass protein 2 [Salmo salar]
Length = 217
Score = 77.8 bits (190), Expect = 5e-14
Identities = 43/158 (27%), Positives = 83/158 (52%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G V ++ KL + +I+CA +G+AAD + +++ QL++HS+ G P+V + TL
Sbjct: 41 GETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATL 100
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
+K ++Y+ + A+L+VAG D G V +G + P+ GSGS + ++
Sbjct: 101 VKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGLLSRQPFAVGGSGSAYVYGFVDAEY 160
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITT 474
+ +S+++ + + + + D GS+ VA + T
Sbjct: 161 RKAMSKEDCQQFVVNTLSLAMSRD---GSSGGVAYLVT 195
>gb|AAD28715.1|AF112117_1 (AF112117) low molecular mass polypeptide complex subunit 2
[Oncorhynchus mykiss]
Length = 217
Score = 77.8 bits (190), Expect = 5e-14
Identities = 43/158 (27%), Positives = 84/158 (52%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G V ++ KL + +I+CA +G+AAD++ +++ QL++HS+ G P+V + TL
Sbjct: 41 GETVVNRVMNKLSLLHDKIYCALSGSAADSQTIAEMVNYQLDVHSIEVGEDPQVRSAATL 100
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
+K ++Y+ + A+L+VAG D G V +G + P+ GSGS + ++
Sbjct: 101 VKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGLLSRQPFAVGGSGSSYVYGFVDAEY 160
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITT 474
+ +S+++ + + + + D GS+ VA + T
Sbjct: 161 RKAMSKEDCQQFVVNTLSLAMSRD---GSSGGVAYLVT 195
>gb|AAL59852.1|AF357920_1 (AF357920) proteasome beta-subunit [Ginglymostoma cirratum]
Length = 217
Score = 77.4 bits (189), Expect = 6e-14
Identities = 47/164 (28%), Positives = 79/164 (47%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G + ++ KL + +I+CA +G+AAD + ++ QLELHS+ TG P V ++
Sbjct: 41 GEAICNRVMNKLSPLHDRIYCALSGSAADAQAIADSVNYQLELHSIETGDAPLVQAAASV 100
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
+K ++Y+ + A+L+VAG D G + P+ GSGS + +
Sbjct: 101 VKNISYKYKEELTAHLIVAGWDRKKKGQVYATLGGMIIRQPFSVGGSGSFYIYGYVDATY 160
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
K ++S+ E + +AI + D SG V + IT T K
Sbjct: 161 KEEMSKDECLTFVINAITLAIGRDGASGGVVYLTTITEKGTEHK 204
>dbj|BAA19760.1| (D87689) proteasome subunit Y [Xenopus laevis]
Length = 230
Score = 77.0 bits (188), Expect = 8e-14
Identities = 46/165 (27%), Positives = 85/165 (50%), Gaps = 1/165 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +A++ +KL + +I+C +G+AADT+ ++ QL HS+ P V T L
Sbjct: 53 GAYIANRVTDKLTPVHDRIFCCRSGSAADTQAIADAVTYQLGFHSIELDGPPLVHTAANL 112
Query: 181 LKQHLFRYQGHIGAYLVVAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
K+ +RY+ + A ++VAG D G ++TV G + GSGS ++
Sbjct: 113 FKEMCYRYREDLMAGIIVAGWDKRKGGQVYTVPMGGMLVHQQFSIGGSGSSYIYGFVDST 172
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRK 492
++P ++++E +K ++A+ + D SG + +A IT + R+
Sbjct: 173 YRPGMTKEECLKFTANALALAMERDGSSGGVIRLAAITEEGVERQ 217
>gb|AAD53038.1|AF115541_1 (AF115541) low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 77.0 bits (188), Expect = 8e-14
Identities = 43/158 (27%), Positives = 83/158 (52%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G V ++ KL + +I+CA +G+AAD + +++ QL++HS+ G P+V + TL
Sbjct: 41 GETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATL 100
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQW 360
+K ++Y+ + A+L+VAG D G V +G + P+ GSGS + ++
Sbjct: 101 VKNISYKYKEDLSAHLIVAGWDKRGGGQVYVTLNGLLSRQPFAVGGSGSSYVYGFVDAEY 160
Query: 361 KPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITT 474
+ +S+++ + + + + D GS+ VA + T
Sbjct: 161 RKAMSKEDCQQFVVNTLSLAMSRD---GSSGGVAYLVT 195
>emb|CAC02011.2| (AL390114) probable proteasome beta-1 subunit [Leishmania major]
Length = 347
Score = 76.6 bits (187), Expect = 1e-13
Identities = 45/161 (27%), Positives = 78/161 (47%), Gaps = 1/161 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G V ++ KL ++ +I+C +G+AADT+ +S+ L + G V T L
Sbjct: 141 GTYVVNRASNKLTKLTEKIYCCRSGSAADTQALAERVSNYLGSYQTDIGADVNVATAANL 200
Query: 181 LKQHLFRYQGHIGAYLVVAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
+ + + +I A ++VAG DP G ++++ + GS KL Y GSGS+ S F+
Sbjct: 201 FHKMCYVNRWNISAGIIVAGYDPINGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDAN 260
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDK 480
+KP +S+ E + A+ D SG + + D+
Sbjct: 261 YKPGMSKSECVAFCQRAVAHAYSRDGSSGGLIRTITLDADE 301
>ref|NP_012533.1| (NC_001142) Proteasome subunit necessary for hydrolysis of
peptidylglutamyl-peptide; Pre3p [Saccharomyces
cerevisiae]
sp|P38624|PSB6_YEAST Proteasome component PRE3 precursor (Macropain subunit PRE3)
(Proteinase YSCE subunit PRE3) (Multicatalytic
endopeptidase complex subunit PRE3)
pir||S61337 multicatalytic endopeptidase complex (EC 3.4.99.46) chain PRE3 -
yeast (Saccharomyces cerevisiae)
emb|CAA89290.1| (Z49276) ORF YJL001w [Saccharomyces cerevisiae]
Length = 215
Score = 76.3 bits (186), Expect = 1e-13
Identities = 43/168 (25%), Positives = 84/168 (49%), Gaps = 1/168 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +A++ +KL + +IWC +G+AADT+ ++ LEL++ G P T ++
Sbjct: 42 GAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGT-PSTETAASV 100
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGT-HLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
K+ + + ++ A ++VAG D ++T+ GS KLPY GSGS +
Sbjct: 101 FKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKN 160
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYY 501
++ ++S++E + ++ + D SG + + ++T R +Y
Sbjct: 161 FRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFY 208
>emb|CAA55591.1| (X78991) proteasomal subunit Pre3 [Saccharomyces cerevisiae]
emb|CAA60921.1| (X87611) proteasome component pre3 [Saccharomyces cerevisiae]
prf||2008180A peptidyl-Glu protease [Saccharomyces cerevisiae]
Length = 193
Score = 76.3 bits (186), Expect = 1e-13
Identities = 43/168 (25%), Positives = 84/168 (49%), Gaps = 1/168 (0%)
Frame = +1
Query: 1 GPIVADKNCEKLHYISPQIWCAGAGTAADTEFTTALISSQLELHSLSTGRKPRVVTCMTL 180
G +A++ +KL + +IWC +G+AADT+ ++ LEL++ G P T ++
Sbjct: 20 GAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGT-PSTETAASV 78
Query: 181 LKQHLFRYQGHIGAYLVVAGVDPTGT-HLFTVHAHGSTDKLPYVTMGSGSLAAMSVFETQ 357
K+ + + ++ A ++VAG D ++T+ GS KLPY GSGS +
Sbjct: 79 FKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKN 138
Query: 358 WKPDLSQKEAIKLASDAILAGVWNDLGSGSNVDVAIITTDKTTRKRYY 501
++ ++S++E + ++ + D SG + + ++T R +Y
Sbjct: 139 FRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFY 186
>pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution