TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNT3/stackpack/blast_Mgr-N/FgrNT3_10_B23.seq
(613 letters)
Database: /phillip/Ncr/MgrN_SP
1206 sequences; 496,015 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CL66CT74CN78 cl66ct74cn78 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6... 25 0.75
MGNS013BD08F.B mgns013bD08f.b LENGTH:329bp ; DIRECTION:0 ; CLONE... 24 1.0
MGNS001AF06F.B mgns001aF06f.b LENGTH:368bp ; DIRECTION:0 ; CLONE... 24 1.0
CL24CT30CN33 cl24ct30cn33 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:1... 24 1.0
CL162CT173CN179 cl162ct173cn179 COVERAGE:0.99; CRAWID: 1; TOTAL_... 24 1.0
MGNS007BE12F.B mgns007bE12f.b LENGTH:495bp ; DIRECTION:0 ; CLONE... 24 1.9
MGNS012AB10F.B mgns012aB10f.b LENGTH:404bp ; DIRECTION:0 ; CLONE... 24 1.9
MGNS012CC07F.B mgns012cC07f.b LENGTH:371bp ; DIRECTION:0 ; CLONE... 24 1.9
MGNS012CC05F.B mgns012cC05f.b LENGTH:391bp ; DIRECTION:0 ; CLONE... 24 1.9
MGNS010AA12F.B mgns010aA12f.b LENGTH:431bp ; DIRECTION:0 ; CLONE... 24 1.9
CL115CT126CN131 cl115ct126cn131 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 2.7
CL186CT197CN203 cl186ct197cn203 COVERAGE:1.0; CRAWID: 1; TOTAL_E... 23 2.7
MGNS009DG08F.B mgns009dG08f.b LENGTH:273bp ; DIRECTION:0 ; CLONE... 23 2.7
CL146CT157CN163 cl146ct157cn163 COVERAGE:0.96; CRAWID: 1; TOTAL_... 23 2.7
MGNS008BA05F.B mgns008bA05f.b LENGTH:431bp ; DIRECTION:0 ; CLONE... 23 2.7
MGNS013DA07F.B mgns013dA07f.b LENGTH:551bp ; DIRECTION:0 ; CLONE... 23 2.7
MGNS012AC04F.B mgns012aC04f.b LENGTH:417bp ; DIRECTION:0 ; CLONE... 23 2.7
MGNS012AB01F.B mgns012aB01f.b LENGTH:449bp ; DIRECTION:0 ; CLONE... 23 2.7
MGNS013DD11F.B mgns013dD11f.b LENGTH:343bp ; DIRECTION:0 ; CLONE... 23 3.7
MGNS007CA12F.B mgns007cA12f.b LENGTH:531bp ; DIRECTION:0 ; CLONE... 23 3.7
MGNS011BA08F.B mgns011bA08f.b LENGTH:384bp ; DIRECTION:0 ; CLONE... 23 3.7
MGNS010BG06F.B mgns010bG06f.b LENGTH:522bp ; DIRECTION:0 ; CLONE... 23 3.7
CL46CT53CN56 cl46ct53cn56 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:2... 22 5.1
MGNS012CD02F.B mgns012cD02f.b LENGTH:452bp ; DIRECTION:0 ; CLONE... 22 5.1
CL228CT239CN245 cl228ct239cn245 COVERAGE:0.99; CRAWID: 1; TOTAL_... 22 5.1
CL4CT4CN4 cl4ct4cn4 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3; ESTS... 22 5.1
MGNS011BD09F.B mgns011bD09f.b LENGTH:328bp ; DIRECTION:0 ; CLONE... 22 5.1
MGNS008BG03F.B mgns008bG03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE... 22 5.1
MGNS004DF08F.B mgns004dF08f.b LENGTH:395bp ; DIRECTION:0 ; CLONE... 22 5.1
MGNS002DA02F.B mgns002dA02f.b LENGTH:373bp ; DIRECTION:0 ; CLONE... 22 5.1
MGNS010CF10F.B mgns010cF10f.b LENGTH:368bp ; DIRECTION:0 ; CLONE... 22 5.1
MGNS011DC01F.B mgns011dC01f.b LENGTH:415bp ; DIRECTION:0 ; CLONE... 22 5.1
CL22CT28CN31 cl22ct28cn31 COVERAGE:0.94; CRAWID: 1; TOTAL_ESTS:4... 22 5.1
CL69CT77CN81 cl69ct77cn81 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:2;... 22 6.9
CL72CT81CN85 cl72ct81cn85 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:7... 22 6.9
CL69CT78CN82 cl69ct78cn82 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3... 22 6.9
MGNS007AD10F.B mgns007aD10f.b LENGTH:503bp ; DIRECTION:0 ; CLONE... 21 9.5
MGNS001BB05F.B mgns001bB05f.b LENGTH:487bp ; DIRECTION:0 ; CLONE... 21 9.5
CL80CT90CN94 cl80ct90cn94 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:8... 21 9.5
MGNS007BE01F.B mgns007bE01f.b LENGTH:478bp ; DIRECTION:0 ; CLONE... 21 9.5
CL79CT89CN93 cl79ct89cn93 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3... 21 9.5
CL235CT247CN253 cl235ct247cn253 COVERAGE:0.99; CRAWID: 1; TOTAL_... 21 9.5
CL21CT27CN30 cl21ct27cn30 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:2;... 21 9.5
MGNS010BA06F.B mgns010bA06f.b LENGTH:530bp ; DIRECTION:0 ; CLONE... 21 9.5
MGNS013CD08F.B mgns013cD08f.b LENGTH:468bp ; DIRECTION:0 ; CLONE... 21 9.5
MGNS010AD11F.B mgns010aD11f.b LENGTH:309bp ; DIRECTION:0 ; CLONE... 21 9.5
CL76CT85CN89 cl76ct85cn89 COVERAGE:0.96; CRAWID: 1; TOTAL_ESTS:6... 21 9.5
>CL66CT74CN78 cl66ct74cn78 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6;
ESTS:mgns001cB09f.b,mgns001
Length = 491
Score = 24.9 bits (48), Expect = 0.75
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1 / +3
Query: 517 HHPRHNLLRLPPDEH 473
HH +N LR+ P+EH
Sbjct: 432 HHTFYNELRVAPEEH 476
>MGNS013BD08F.B mgns013bD08f.b LENGTH:329bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 329
Score = 24.4 bits (47), Expect = 1.0
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -2 / -2
Query: 576 KPLSLELVGMQQHANSFSGTIIHGTISSVSPQMNTALRNVKM 451
+P L+G + H N + HG V P + A ++M
Sbjct: 157 RPSFRHLLGNEHHKNGWGKIHSHGRWHHVLPGLGLAWARIEM 32
>MGNS001AF06F.B mgns001aF06f.b LENGTH:368bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 368
Score = 24.4 bits (47), Expect = 1.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1 / +1
Query: 454 DDHQGSGAHLPRDHEHPRFYNPI 386
D H G+GAH D H Y +
Sbjct: 157 DQHTGTGAHATVDFLHRLLYRKL 225
>CL24CT30CN33 cl24ct30cn33 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:13;
ESTS:mgns001aE03f.b,mgns00
Length = 769
Score = 24.4 bits (47), Expect = 1.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1 / +3
Query: 517 HHPRHNLLRLPPDEHGSSQRQDDHQG 440
HH H L RLP +E + + HQG
Sbjct: 654 HHVGHQLPRLPSEEGLAERW*PYHQG 731
>CL162CT173CN179 cl162ct173cn179 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:16; ESTS:mgns004aB07f.b,mgn
Length = 638
Score = 24.4 bits (47), Expect = 1.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +2
Query: 472 GSSQRQDDHQGSGAHLPR 419
G RQD QG GAH R
Sbjct: 275 GRGLRQDQPQGRGAHARR 328
>MGNS007BE12F.B mgns007bE12f.b LENGTH:495bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 495
Score = 23.5 bits (45), Expect = 1.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -1
Query: 475 HGSSQRQDDHQGSGAH 428
HGSS+R DHQ H
Sbjct: 165 HGSSRRLGDHQWHMRH 118
>MGNS012AB10F.B mgns012aB10f.b LENGTH:404bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 404
Score = 23.5 bits (45), Expect = 1.9
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = +3 / -3
Query: 372 REG*SIGL*NLGCSWSRGRWAP 437
R G + L GCS ++G W P
Sbjct: 195 RAGIDVDLAASGCSKTKGSWRP 130
>MGNS012CC07F.B mgns012cC07f.b LENGTH:371bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 371
Score = 23.5 bits (45), Expect = 1.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1 / +3
Query: 517 HHPRHNLLRLPPDEHGSSQRQDDHQGSGAHL 425
HH RHN + + + QR+ D + HL
Sbjct: 150 HHHRHNAGNISQQDLQAQQRRRDPRRGIRHL 242
>MGNS012CC05F.B mgns012cC05f.b LENGTH:391bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 391
Score = 23.5 bits (45), Expect = 1.9
Identities = 7/18 (38%), Positives = 10/18 (54%)
Frame = -3 / +3
Query: 134 HHSWSGYDIEMISHFKWN 81
HH+WS E H +W+
Sbjct: 201 HHAWSSRH*EQEGHPRWS 254
>MGNS010AA12F.B mgns010aA12f.b LENGTH:431bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 431
Score = 23.5 bits (45), Expect = 1.9
Identities = 8/26 (30%), Positives = 11/26 (41%)
Frame = -1 / +3
Query: 508 RHNLLRLPPDEHGSSQRQDDHQGSGA 431
R L L G + + HQ SG+
Sbjct: 162 RKRLFSLISSRLGGANNESQHQSSGS 239
>CL115CT126CN131 cl115ct126cn131 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns002aF12f.b,mgns
Length = 458
Score = 23.1 bits (44), Expect = 2.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3 / -3
Query: 411 SWSRGRWAPDP 443
SW+R RWA P
Sbjct: 360 SWARSRWAGRP 328
>CL186CT197CN203 cl186ct197cn203 COVERAGE:1.0; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007aD01f.b,mgns0
Length = 529
Score = 23.1 bits (44), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3 / +1
Query: 155 EDGSVKAHHSWSGYDIEM 102
E GS+K + WS D+E+
Sbjct: 106 EIGSIKLFNKWSYEDVEI 159
>MGNS009DG08F.B mgns009dG08f.b LENGTH:273bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 273
Score = 23.1 bits (44), Expect = 2.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1 / +2
Query: 514 HPRHNLLRLPPDEHGSSQR 458
HPRH + P EHG R
Sbjct: 188 HPRHWRRQRPLPEHGRHDR 244
>CL146CT157CN163 cl146ct157cn163 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns002cH04f.b,mgns
Length = 625
Score = 23.1 bits (44), Expect = 2.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2 / +3
Query: 140 LRFHPPSLLSRLASYLFLRC 199
L FH PS SR F RC
Sbjct: 465 LVFHRPSPCSRSRPSAFSRC 524
>MGNS008BA05F.B mgns008bA05f.b LENGTH:431bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 431
Score = 23.1 bits (44), Expect = 2.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 476 FIWGETEEIVPWM 514
FIWG + + PW+
Sbjct: 300 FIWGLLKPLFPWL 338
>MGNS013DA07F.B mgns013dA07f.b LENGTH:551bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 551
Score = 23.1 bits (44), Expect = 2.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1 / -2
Query: 571 GFGLCVPFFNSIVT 612
GFG C PF ++I T
Sbjct: 157 GFGKCGPFLSTIST 116
>MGNS012AC04F.B mgns012aC04f.b LENGTH:417bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 417
Score = 23.1 bits (44), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (49%)
Frame = +3 / -1
Query: 411 SWSRGRWAPDP*WSS*RC 464
SW GRW W + RC
Sbjct: 174 SWHAGRWPGQVCW*AGRC 121
>MGNS012AB01F.B mgns012aB01f.b LENGTH:449bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 449
Score = 23.1 bits (44), Expect = 2.7
Identities = 6/16 (37%), Positives = 8/16 (49%)
Frame = +2 / -3
Query: 503 VPWMMVPENELACCCI 550
+PW P CCC+
Sbjct: 96 LPWFPKPPPPPCCCCL 49
>MGNS013DD11F.B mgns013dD11f.b LENGTH:343bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 343
Score = 22.6 bits (43), Expect = 3.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / +1
Query: 11 KRRYPPQEDSDSYSFYG 61
+RR+PP+ DS YG
Sbjct: 250 QRRFPPKRFRDSPQAYG 300
>MGNS007CA12F.B mgns007cA12f.b LENGTH:531bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 531
Score = 22.6 bits (43), Expect = 3.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3 / -1
Query: 162 SFLAWPPISS 191
SF AWP SS
Sbjct: 231 SFSAWPSRSS 202
>MGNS011BA08F.B mgns011bA08f.b LENGTH:384bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 384
Score = 22.6 bits (43), Expect = 3.7
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 51 LYESESSWGGYRLLV 7
+++SESS+ G+ L+
Sbjct: 179 IWQSESSFSGFMSLI 135
>MGNS010BG06F.B mgns010bG06f.b LENGTH:522bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 522
Score = 22.6 bits (43), Expect = 3.7
Identities = 11/43 (25%), Positives = 17/43 (38%)
Frame = +3 / +1
Query: 18 DTHPKRIQIHTVFMAKQPERQVPFKM*YHLDIIATPRMMRLYA 146
D P+ + + VP+ M Y+L I + LYA
Sbjct: 340 DHSPRFVLLSYPLTLPSGRMSVPYVMLYYLPITCNSELRMLYA 468
>CL46CT53CN56 cl46ct53cn56 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:2;
ESTS:mgns001bD03f.b,mgns011
Length = 555
Score = 22.1 bits (42), Expect = 5.1
Identities = 6/7 (85%), Positives = 7/7 (99%)
Frame = -1 / +2
Query: 523 RNHHPRH 503
R+HHPRH
Sbjct: 128 RHHHPRH 148
>MGNS012CD02F.B mgns012cD02f.b LENGTH:452bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 452
Score = 22.1 bits (42), Expect = 5.1
Identities = 11/38 (28%), Positives = 13/38 (33%)
Frame = -1 / +2
Query: 514 HPRHNLLRLPPDEHGSSQRQDDHQGSGAHLPRDHEHPR 401
HPRH P + + HQ S H H R
Sbjct: 275 HPRHQPFDGRPRQRPRCHQHHRHQRSWLDWYHRHRHDR 388
>CL228CT239CN245 cl228ct239cn245 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns008bB09f.b,mgns
Length = 514
Score = 22.1 bits (42), Expect = 5.1
Identities = 7/15 (46%), Positives = 9/15 (59%)
Frame = -1 / +3
Query: 517 HHPRHNLLRLPPDEH 473
H+ RH+ LR P H
Sbjct: 192 HNRRHSRLRRPSLHH 236
>CL4CT4CN4 cl4ct4cn4 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001aA06f.b,mgns001aA0
Length = 574
Score = 22.1 bits (42), Expect = 5.1
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = +3 / -1
Query: 405 GCSWSRGR 428
GC W GR
Sbjct: 394 GCPWR*GR 371
>MGNS011BD09F.B mgns011bD09f.b LENGTH:328bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 328
Score = 22.1 bits (42), Expect = 5.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3 / -3
Query: 447 WSS*RCEEPCS 479
WSS R EE C+
Sbjct: 56 WSSPRAEEGCA 24
>MGNS008BG03F.B mgns008bG03f.b LENGTH:395bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 395
Score = 22.1 bits (42), Expect = 5.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / +3
Query: 430 HLPRDHEHPR 401
H P DHE PR
Sbjct: 129 HAPDDHEKPR 158
>MGNS004DF08F.B mgns004dF08f.b LENGTH:395bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 395
Score = 22.1 bits (42), Expect = 5.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 149 HPPSLLSRLASYL 187
HPPSLLS S++
Sbjct: 329 HPPSLLSVRVSFI 291
>MGNS002DA02F.B mgns002dA02f.b LENGTH:373bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 373
Score = 22.1 bits (42), Expect = 5.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +2
Query: 68 TRTPSSI*NVISSRYHSHSTNDAPLR 145
TRTP+ ++ + R HST P R
Sbjct: 167 TRTPTLPISLFTRRLAIHSTTHLPTR 244
>MGNS010CF10F.B mgns010cF10f.b LENGTH:368bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 368
Score = 22.1 bits (42), Expect = 5.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2 / +1
Query: 107 RYHSHSTNDAPLRFHPPSLL 166
R+H + APLR P LL
Sbjct: 127 RHHQEPVHQAPLRPQVPYLL 186
>MGNS011DC01F.B mgns011dC01f.b LENGTH:415bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 415
Score = 22.1 bits (42), Expect = 5.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 475 HGSSQRQDDHQGS 437
HG +R+ +HQG+
Sbjct: 413 HGGRRRRQEHQGA 375
>CL22CT28CN31 cl22ct28cn31 COVERAGE:0.94; CRAWID: 1; TOTAL_ESTS:4;
ESTS:mgns001aD11f.b,mgns002
Length = 474
Score = 22.1 bits (42), Expect = 5.1
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = +3 / -1
Query: 45 HTVFMAKQPERQVPFKM*YHLDI 113
HTV + + P QVP HL I
Sbjct: 423 HTVSLLRVPIHQVPRSSDQHLKI 355
>CL69CT77CN81 cl69ct77cn81 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:2;
ESTS:mgns007bA04f.b,mgns012a
Length = 452
Score = 21.7 bits (41), Expect = 6.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1 / +2
Query: 523 RNHHPRH 503
R HHPRH
Sbjct: 311 RRHHPRH 331
>CL72CT81CN85 cl72ct81cn85 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:78;
ESTS:mgns001cD10f.b,mgns00
Length = 683
Score = 21.7 bits (41), Expect = 6.9
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +2 / +1
Query: 518 VPENELACCCIPTSSRDKGL 577
V + C C P D+GL
Sbjct: 613 VVRQQTCCSCAPPPQEDEGL 672
>CL69CT78CN82 cl69ct78cn82 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001cC10f.b,mgns001
Length = 426
Score = 21.7 bits (41), Expect = 6.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1 / +1
Query: 523 RNHHPRH 503
R HHPRH
Sbjct: 280 RRHHPRH 300
>MGNS007AD10F.B mgns007aD10f.b LENGTH:503bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 503
Score = 21.2 bits (40), Expect = 9.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2 / -2
Query: 107 RYHSHSTNDAPLRFHPPSLLS 169
R+H H + R PPS+ S
Sbjct: 454 RHHHHHNHHQAYRSTPPSIPS 392
>MGNS001BB05F.B mgns001bB05f.b LENGTH:487bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 487
Score = 21.2 bits (40), Expect = 9.5
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +3 / -2
Query: 405 GCSWSRGRWAPDP*W 449
G S SRG W+P W
Sbjct: 417 GQSRSRGTWSPAGRW 373
>CL80CT90CN94 cl80ct90cn94 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:8;
ESTS:mgns001cG09f.b,mgns001
Length = 668
Score = 21.2 bits (40), Expect = 9.5
Identities = 8/29 (27%), Positives = 11/29 (37%)
Frame = +1 / +3
Query: 1 HTYQKAIPTPRGFRFIQFLWLNNPNAKFH 87
H ++ PRG WL P + H
Sbjct: 474 HRQRRRRHRPRGLPRRSVWWLQRPEGRHH 560
>MGNS007BE01F.B mgns007bE01f.b LENGTH:478bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 478
Score = 21.2 bits (40), Expect = 9.5
Identities = 7/13 (53%), Positives = 9/13 (68%)
Frame = -3 / -3
Query: 194 AGRDRRPGEKGEK 156
A D RPG KG++
Sbjct: 473 ANADARPGPKGQR 435
>CL79CT89CN93 cl79ct89cn93 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001cF12f.b,mgns002
Length = 728
Score = 21.2 bits (40), Expect = 9.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 478 EHGSSQRQDDHQGSG 434
EHG++ DD+ G G
Sbjct: 567 EHGAAHGLDDNAGRG 523
>CL235CT247CN253 cl235ct247cn253 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns008cD11f.b,mgns
Length = 537
Score = 21.2 bits (40), Expect = 9.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 65 TTRTPSSI*NVISSRYHSHS 124
TT +PSS + SSR +HS
Sbjct: 318 TTSSPSSRPSTSSSRCSTHS 377
>CL21CT27CN30 cl21ct27cn30 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:2;
ESTS:mgns001aD09f.b,mgns012c
Length = 574
Score = 21.2 bits (40), Expect = 9.5
Identities = 13/42 (30%), Positives = 19/42 (44%)
Frame = +3 / -2
Query: 84 PFKM*YHLDIIATPRMMRLYASILLLSFLAWPPISSCVVLSK 209
PFKM L + P + + + + LAW IS V +K
Sbjct: 402 PFKMSIVLSSQSCPSVTGGWRCWM*MVLLAWSTISDFVTQAK 277
>MGNS010BA06F.B mgns010bA06f.b LENGTH:530bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 530
Score = 21.2 bits (40), Expect = 9.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1 / -2
Query: 460 RQDDHQGSGAHLPRDHEHP 404
R DH SG+ PR+ P
Sbjct: 466 RHPDHASSGSRNPREAS*P 410
>MGNS013CD08F.B mgns013cD08f.b LENGTH:468bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 468
Score = 21.2 bits (40), Expect = 9.5
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 597 EKWYAQPKPLSLELVG 550
++W +PKP + +L G
Sbjct: 422 DEWVLRPKPSAADLEG 375
>MGNS010AD11F.B mgns010aD11f.b LENGTH:309bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 309
Score = 21.2 bits (40), Expect = 9.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +3 / +3
Query: 405 GCSWSRGRWAPDP 443
GC W+R +P P
Sbjct: 228 GCHWARTGTSPSP 266
>CL76CT85CN89 cl76ct85cn89 COVERAGE:0.96; CRAWID: 1; TOTAL_ESTS:6;
ESTS:mgns001cF02f.b,mgns007
Length = 818
Score = 21.2 bits (40), Expect = 9.5
Identities = 11/38 (28%), Positives = 19/38 (49%)
Frame = -2 / -3
Query: 600 VEKWYAQPKPLSLELVGMQQHANSFSGTIIHGTISSVS 487
+E W + +SL LVG A+S S +S+++
Sbjct: 696 LELWRRKE*MMSLTLVGPSSRASSASSAEALAPVSTLT 583
Database: /phillip/Ncr/MgrN_SP
Posted date: Feb 18, 2002 5:07 PM
Number of letters in database: 496,015
Number of sequences in database: 1206
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 601760
Number of Sequences: 1206
Number of extensions: 7488
Number of successful extensions: 464
Number of sequences better than 10.0: 48
length of query: 204
length of database: 165,338
effective HSP length: 34
effective length of query: 169
effective length of database: 124,334
effective search space: 21012446
effective search space used: 21012446
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 40 (21.2 bits)