TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNT3/stackpack/blast_Mgr-N/FgrNT3_10_E01.seq
(498 letters)
Database: /phillip/Ncr/MgrN_SP
1206 sequences; 496,015 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CL10CT11CN11 cl10ct11cn11 COVERAGE:0.97; CRAWID: 1; TOTAL_ESTS:3... 138 6e-35
MGNS004DF04F.B mgns004dF04f.b LENGTH:537bp ; DIRECTION:0 ; CLONE... 30 0.013
MGNS001AB08F.B mgns001aB08f.b LENGTH:529bp ; DIRECTION:0 ; CLONE... 28 0.063
CL167CT178CN184 cl167ct178cn184 COVERAGE:0.99; CRAWID: 1; TOTAL_... 26 0.23
CL31CT37CN40 cl31ct37cn40 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:2... 26 0.31
MGNS013BE04F.B mgns013bE04f.b LENGTH:366bp ; DIRECTION:0 ; CLONE... 26 0.31
MGNS001BH10F.B mgns001bH10f.b LENGTH:479bp ; DIRECTION:0 ; CLONE... 25 0.42
CL14CT15CN15 cl14ct15cn15 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6... 25 0.58
CL187CT198CN204 cl187ct198cn204 COVERAGE:0.99; CRAWID: 1; TOTAL_... 25 0.58
MGNS007BA11F.B mgns007bA11f.b LENGTH:505bp ; DIRECTION:0 ; CLONE... 25 0.58
MGNS007BG05F.B mgns007bG05f.b LENGTH:378bp ; DIRECTION:0 ; CLONE... 25 0.58
MGNS011CF03F.B mgns011cF03f.b LENGTH:451bp ; DIRECTION:0 ; CLONE... 24 0.80
MGNS012CD03F.B mgns012cD03f.b LENGTH:397bp ; DIRECTION:0 ; CLONE... 24 0.80
MGNS011CE09F.B mgns011cE09f.b LENGTH:387bp ; DIRECTION:0 ; CLONE... 24 1.1
MGNS013DB02F.B mgns013dB02f.b LENGTH:469bp ; DIRECTION:0 ; CLONE... 22 1.5
MGNS010AB08F.B mgns010aB08f.b LENGTH:494bp ; DIRECTION:0 ; CLONE... 24 1.5
MGNS002CA07F.B mgns002cA07f.b LENGTH:433bp ; DIRECTION:0 ; CLONE... 24 1.5
MGNS012CC07F.B mgns012cC07f.b LENGTH:371bp ; DIRECTION:0 ; CLONE... 24 1.5
CL47CT54CN57 cl47ct54cn57 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:8... 24 1.5
CL248CT260CN266 cl248ct260cn266 COVERAGE:0.99; CRAWID: 1; TOTAL_... 24 1.5
MGNS007AH12F.B mgns007aH12f.b LENGTH:525bp ; DIRECTION:0 ; CLONE... 24 1.5
MGNS002AE09F.B mgns002aE09f.b LENGTH:295bp ; DIRECTION:0 ; CLONE... 24 1.5
CL153CT164CN170 cl153ct164cn170 COVERAGE:0.98; CRAWID: 1; TOTAL_... 23 2.1
CL230CT241CN247 cl230ct241cn247 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 2.1
MGNS007AH06F.B mgns007aH06f.b LENGTH:451bp ; DIRECTION:0 ; CLONE... 23 2.1
MGNS010AE12F.B mgns010aE12f.b LENGTH:349bp ; DIRECTION:0 ; CLONE... 23 2.1
CL160CT171CN177 cl160ct171cn177 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 2.1
MGNS001AG07F.B mgns001aG07f.b LENGTH:565bp ; DIRECTION:0 ; CLONE... 21 2.6
CL1CT1CN1 cl1ct1cn1 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:2; ESTS... 23 2.9
MGNS009DE01F.B mgns009dE01f.b LENGTH:369bp ; DIRECTION:0 ; CLONE... 23 2.9
CL244CT256CN262 cl244ct256cn262 COVERAGE:0.95; CRAWID: 1; TOTAL_... 23 2.9
CL51CT58CN61 cl51ct58cn61 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3... 23 2.9
MGNS008CG02F.B mgns008cG02f.b LENGTH:540bp ; DIRECTION:0 ; CLONE... 23 2.9
MGNS007AD10F.B mgns007aD10f.b LENGTH:503bp ; DIRECTION:0 ; CLONE... 23 2.9
CL235CT247CN253 cl235ct247cn253 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 2.9
CL206CT217CN223 cl206ct217cn223 COVERAGE:0.98; CRAWID: 1; TOTAL_... 22 3.9
CL62CT70CN73 cl62ct70cn73 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3... 22 3.9
MGNS002BE03F.B mgns002bE03f.b LENGTH:358bp ; DIRECTION:0 ; CLONE... 22 3.9
MGNS011BA01F.B mgns011bA01f.b LENGTH:291bp ; DIRECTION:0 ; CLONE... 22 3.9
CL144CT155CN161 cl144ct155cn161 COVERAGE:0.99; CRAWID: 1; TOTAL_... 22 3.9
CL183CT194CN200 cl183ct194cn200 COVERAGE:0.98; CRAWID: 1; TOTAL_... 22 5.4
CL53CT60CN63 cl53ct60cn63 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3... 22 5.4
MGNS012AB02F.B mgns012aB02f.b LENGTH:415bp ; DIRECTION:0 ; CLONE... 22 5.4
MGNS011CF04F.B mgns011cF04f.b LENGTH:511bp ; DIRECTION:0 ; CLONE... 22 5.4
CL41CT48CN51 cl41ct48cn51 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3... 22 5.4
MGNS010AG10F.B mgns010aG10f.b LENGTH:487bp ; DIRECTION:0 ; CLONE... 22 5.4
MGNS009DC05F.B mgns009dC05f.b LENGTH:461bp ; DIRECTION:0 ; CLONE... 22 5.4
CL33CT39CN42 cl33ct39cn42 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6... 22 5.5
MGNS012CB10F.B mgns012cB10f.b LENGTH:388bp ; DIRECTION:0 ; CLONE... 21 7.4
CL101CT112CN116 cl101ct112cn116 COVERAGE:0.96; CRAWID: 1; TOTAL_... 21 7.4
CL61CT68CN71 cl61ct68cn71 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:1;... 21 7.4
MGNS012CF12F.B mgns012cF12f.b LENGTH:116bp ; DIRECTION:0 ; CLONE... 21 7.4
CL98CT109CN113 cl98ct109cn113 COVERAGE:0.99; CRAWID: 1; TOTAL_ES... 21 7.4
CL26CT32CN35 cl26ct32cn35 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:5... 21 7.4
MGNS007CF07F.B mgns007cF07f.b LENGTH:358bp ; DIRECTION:0 ; CLONE... 21 7.4
MGNS012CA06F.B mgns012cA06f.b LENGTH:368bp ; DIRECTION:0 ; CLONE... 21 7.4
MGNS007DA04F.B mgns007dA04f.b LENGTH:438bp ; DIRECTION:0 ; CLONE... 21 7.4
MGNS011BA10F.B mgns011bA10f.b LENGTH:420bp ; DIRECTION:0 ; CLONE... 21 7.4
MGNS001DE02F.B mgns001dE02f.b LENGTH:418bp ; DIRECTION:0 ; CLONE... 21 7.4
MGNS009CC09F.B mgns009cC09f.b LENGTH:243bp ; DIRECTION:0 ; CLONE... 21 7.4
CL198CT209CN215 cl198ct209cn215 COVERAGE:0.99; CRAWID: 1; TOTAL_... 21 7.4
CL203CT214CN220 cl203ct214cn220 COVERAGE:0.99; CRAWID: 1; TOTAL_... 21 7.5
>CL10CT11CN11 cl10ct11cn11 COVERAGE:0.97; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001aB05f.b,mgns007
Length = 370
Score = 138 bits (295), Expect = 6e-35
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +2 / +1
Query: 2 SSTMASALLRSTPALRAGLRARSTPLAAMATTSFVRGKATLPDLPYDYGALEPYISGQIM 181
S+ ++L+R+TPA+R LR+R+ AAMA+TSFVRGKATLPDL YDYGALEPYIS +IM
Sbjct: 94 STLTMASLIRTTPAVRGALRSRAFKPAAMASTSFVRGKATLPDLKYDYGALEPYISAEIM 273
Query: 182 ELHHSKHHQTYVTGFNNATDAI 247
ELHHSKHH TYV G+N+A AI
Sbjct: 274 ELHHSKHHNTYVQGYNSAXQAI 339
Score = 55.1 bits (114), Expect = 5e-10
Identities = 28/50 (56%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 234 ALLKPVT*VWWCLEW*SSMIWPEM*XXXXXXXXXXXXRVALPRTKLVVAI 85
ALL P T V WCLEW SSMI EM* VALPRTKLV+A+
Sbjct: 326 ALL*PCTYVLWCLEWWSSMISAEM*GSSAP*SYFRSGSVALPRTKLVLAM 177
Score = 54.2 bits (112), Expect = 9e-10
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -2 / -1
Query: 185 AP*SGQRCRAQERHSRREDRGEWPCRGRSWW*P 87
AP*S RCRA+ R SR RG WPCRG+SW P
Sbjct: 277 AP*SRPRCRARARRSRTSGRGVWPCRGQSWCWP 179
Score = 53.8 bits (111), Expect = 3e-09
Identities = 21/32 (65%), Positives = 26/32 (80%)
Frame = -3 / -2
Query: 181 HDLARDVGLKSAIVVGKIGESGLAADEAGGSH 86
HDL RDVGL+ A+VV ++GE GLAAD+AG H
Sbjct: 273 HDLGRDVGLERAVVVLQVGECGLAADKAGAGH 178
Score = 28.1 bits (55), Expect(3) = 4e-06
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1 / +3
Query: 22 SSSINSRPPRWPARPLYSPRGYGYHQLRPRQGH 120
S N+R P + + +G HQL PRQGH
Sbjct: 114 SHPYNTRRPWSSSLARFQACCHGQHQLCPRQGH 212
Score = 25.8 bits (50), Expect(3) = 4e-06
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 138 TTMALLSPTSLARSWS 185
TT A SPTS RSWS
Sbjct: 230 TTTARSSPTSRPRSWS 277
Score = 25.8 bits (50), Expect(3) = 4e-06
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 175 DHGASPLQAP 204
DHGA PLQAP
Sbjct: 267 DHGAPPLQAP 296
Score = 22.6 bits (43), Expect = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1 / -1
Query: 43 PPRWPARPLYSP 78
P RWPAR SP
Sbjct: 346 PRRWPARRCCSP 311
>MGNS004DF04F.B mgns004dF04f.b LENGTH:537bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 537
Score = 30.4 bits (60), Expect = 0.013
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 173 GQRCRAQERHSRREDRGEWPCR 108
G+RCR ++R +R G W CR
Sbjct: 187 GRRCRRRQRGARGGFHGSWQCR 122
>MGNS001AB08F.B mgns001aB08f.b LENGTH:529bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 529
Score = 28.1 bits (55), Expect = 0.063
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = +1 / +2
Query: 304 QLPRRWSRQPLPLLGEPCSQR 366
Q PRRWS P+P L S +
Sbjct: 269 QNPRRWSLMPMPCLNRVSSTK 331
>CL167CT178CN184 cl167ct178cn184 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns004aE05f.b,mgns
Length = 537
Score = 26.3 bits (51), Expect = 0.23
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2 / +2
Query: 5 STMASALLRSTPALRAGLRARSTPLAAMATTSFVRGKATLP 127
S + L+ TP+ R R+TP A++ SF + + P
Sbjct: 173 SGLPPRLVAETPSRSVNARRRTTPSASVRRKSFSSSRRSSP 295
>CL31CT37CN40 cl31ct37cn40 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:2;
ESTS:mgns001aG10f.b,mgns002
Length = 509
Score = 25.8 bits (50), Expect = 0.31
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 173 GQRCRAQERHSRREDRGE 120
G CR +ERH+ RE + E
Sbjct: 247 GVHCRRRERHAHREGQQE 300
>MGNS013BE04F.B mgns013bE04f.b LENGTH:366bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 366
Score = 25.8 bits (50), Expect = 0.31
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2 / +1
Query: 176 SGQRCRAQERHSRREDRGEWPCR 108
SG RC R S G W CR
Sbjct: 10 SGSRCSRGWRQSSSSPPGPWACR 78
>MGNS001BH10F.B mgns001bH10f.b LENGTH:479bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 479
Score = 25.3 bits (49), Expect = 0.42
Identities = 8/15 (53%), Positives = 12/15 (79%)
Frame = +1 / -2
Query: 31 INSRPPRWPARPLYS 75
++ RP RWPAR L++
Sbjct: 172 LSRRPGRWPARRLWA 128
>CL14CT15CN15 cl14ct15cn15 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6;
ESTS:mgns001aC01f.b,mgns002
Length = 691
Score = 24.9 bits (48), Expect = 0.58
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -2 / -2
Query: 137 REDRGEWPCRGRSWW*P*PRGE*SGRAGQ 51
R G WPC+ + W RG G G+
Sbjct: 237 RRSWGRWPCKVHTMWRKSRRGRTCGT*GR 151
>CL187CT198CN204 cl187ct198cn204 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007aD02f.b,mgns
Length = 852
Score = 24.9 bits (48), Expect = 0.58
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2 / +1
Query: 140 RREDRGEWP 114
RR DRG+W
Sbjct: 700 RRSDRGQWS 726
>MGNS007BA11F.B mgns007bA11f.b LENGTH:505bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 505
Score = 24.9 bits (48), Expect = 0.58
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -1 / -2
Query: 207 WWCLEW*SSMIWP 169
WW EW +WP
Sbjct: 180 WWGTEWRGPWLWP 142
>MGNS007BG05F.B mgns007bG05f.b LENGTH:378bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 378
Score = 24.9 bits (48), Expect = 0.58
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1 / -2
Query: 55 PARPLYSPRGYGYHQLRPRQ 114
P P Y P GYG P Q
Sbjct: 188 PEWPKYKPEGYGIESAAPDQ 129
>MGNS011CF03F.B mgns011cF03f.b LENGTH:451bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 451
Score = 24.4 bits (47), Expect = 0.80
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = +1 / +3
Query: 40 RPPRWPARPLYSPRGYGYHQLRP 108
RPP+ PA P RG+ RP
Sbjct: 84 RPPKRPALPADLQRGHTLRAARP 152
>MGNS012CD03F.B mgns012cD03f.b LENGTH:397bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 397
Score = 24.4 bits (47), Expect = 0.80
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -2 / -2
Query: 140 RREDRGEWPCRGRSWW* 90
R RG CR R WW
Sbjct: 255 RERRRGGTWCRRRPWWS 205
>MGNS011CE09F.B mgns011cE09f.b LENGTH:387bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 387
Score = 24.0 bits (46), Expect = 1.1
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -1 / -2
Query: 498 SRPXPEPWIPARVALVC 448
SRP P PW +R A C
Sbjct: 149 SRPAP*PWGCSRAAASC 99
>MGNS013DB02F.B mgns013dB02f.b LENGTH:469bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 469
Score = 21.7 bits (41), Expect(2) = 1.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2 / -3
Query: 176 SGQRCRAQERHSRREDRG 123
SG R RH R E RG
Sbjct: 275 SGPCKRRCRRHRRHEGRG 222
Score = 20.8 bits (39), Expect(2) = 1.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1 / -2
Query: 453 VCFLKASKEPKSSLMEVR 400
VCFL P SSL+ R
Sbjct: 381 VCFLLRPTPPSSSLLGSR 328
>MGNS010AB08F.B mgns010aB08f.b LENGTH:494bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 494
Score = 23.5 bits (45), Expect = 1.5
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2 / +3
Query: 119 WPCRGRSWW 93
W CR R WW
Sbjct: 342 WWCRRRCWW 368
>MGNS002CA07F.B mgns002cA07f.b LENGTH:433bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 433
Score = 23.5 bits (45), Expect = 1.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +3
Query: 389 RAHHHRP 369
RAHHHRP
Sbjct: 147 RAHHHRP 167
>MGNS012CC07F.B mgns012cC07f.b LENGTH:371bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 371
Score = 23.5 bits (45), Expect = 1.5
Identities = 11/31 (35%), Positives = 15/31 (47%)
Frame = +1 / +2
Query: 22 SSSINSRPPRWPARPLYSPRGYGYHQLRPRQ 114
SS+ SR P W + PL G +PR+
Sbjct: 197 SSTTASRSPPWDSAPLRPRASPGRRTPQPRR 289
>CL47CT54CN57 cl47ct54cn57 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:8;
ESTS:mgns001bD07f.b,mgns001
Length = 1024
Score = 23.5 bits (45), Expect = 1.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1 / +3
Query: 498 SRPXPEPWIPARVALVC 448
SRP P W+P + +C
Sbjct: 558 SRPLPRFWLPVSRSSIC 608
>CL248CT260CN266 cl248ct260cn266 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns009bD09f.b,mgns
Length = 371
Score = 23.5 bits (45), Expect = 1.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 22 SSSINSRPPRWPARPLYS 75
SSS++ RP P+RP +S
Sbjct: 267 SSSVSPRPAGPPSRPSFS 320
>MGNS007AH12F.B mgns007aH12f.b LENGTH:525bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 525
Score = 23.5 bits (45), Expect = 1.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1 / -3
Query: 58 ARPLYSPRGYGYHQLRPRQ 114
A P +P+ G+H R RQ
Sbjct: 502 AWPRKTPQSPGFHHCRRRQ 446
>MGNS002AE09F.B mgns002aE09f.b LENGTH:295bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 295
Score = 23.5 bits (45), Expect = 1.5
Identities = 12/32 (37%), Positives = 16/32 (49%)
Frame = +2 / -2
Query: 26 LRSTPALRAGLRARSTPLAAMATTSFVRGKAT 121
L ALRAG A +A + V+G+AT
Sbjct: 273 LSRVKALRAGPCAVKNGVATVQAHGVVKGQAT 178
>CL153CT164CN170 cl153ct164cn170 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgns002dC09f.b,mgns
Length = 604
Score = 23.1 bits (44), Expect = 2.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2 / +2
Query: 161 RAQERHSRREDRGEWP 114
R +RH R R EWP
Sbjct: 167 RFVQRHLRPRHRSEWP 214
>CL230CT241CN247 cl230ct241cn247 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns008bD11f.b,mgns
Length = 495
Score = 23.1 bits (44), Expect = 2.1
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -2 / -3
Query: 128 RGEWPCRGRS 99
R WP R RS
Sbjct: 457 RRSWPARPRS 428
>MGNS007AH06F.B mgns007aH06f.b LENGTH:451bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 451
Score = 23.1 bits (44), Expect = 2.1
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -2 / -2
Query: 170 QRCRAQERHSRREDRGEWPCR 108
+RC R R G+ PCR
Sbjct: 210 RRCEPASRQRRERHCGQRPCR 148
>MGNS010AE12F.B mgns010aE12f.b LENGTH:349bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 349
Score = 23.1 bits (44), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / -2
Query: 116 PCRGRSWW*P*PRG 75
PC GR+ W P P G
Sbjct: 234 PCAGRAGWPPKP*G 193
>CL160CT171CN177 cl160ct171cn177 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns004aA12f.b,mgns
Length = 460
Score = 23.1 bits (44), Expect = 2.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2 / -3
Query: 11 MASALLRSTPALRAGLRARSTPLAAMATTSFVRGKATLPDLP 136
+A+ +L PA+ AGL + A + + G P+LP
Sbjct: 224 VAAQVLHLQPAVPAGLEQVTCVHAVLVRADALPGCPVRPELP 99
>MGNS001AG07F.B mgns001aG07f.b LENGTH:565bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 565
Score = 21.2 bits (40), Expect(2) = 2.6
Identities = 8/22 (36%), Positives = 11/22 (49%)
Frame = +2 / +1
Query: 182 ELHHSKHHQTYVTGFNNATDAI 247
E+HH + HQ T N A+
Sbjct: 214 EIHHHRAHQVVFTQTPNVPIAL 279
Score = 19.4 bits (36), Expect(2) = 2.6
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +3 / +2
Query: 135 PTTMALLSPT 164
PT++A+LSP+
Sbjct: 119 PTSIAILSPS 148
>CL1CT1CN1 cl1ct1cn1 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:2;
ESTS:mgns001aA01f.b,mgns007dE0
Length = 891
Score = 22.6 bits (43), Expect = 2.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / +1
Query: 383 HHHRPY 366
HHHRPY
Sbjct: 778 HHHRPY 795
>MGNS009DE01F.B mgns009dE01f.b LENGTH:369bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 369
Score = 22.6 bits (43), Expect = 2.9
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / -3
Query: 43 PPRWPARP 66
PPRWP P
Sbjct: 109 PPRWPHSP 86
>CL244CT256CN262 cl244ct256cn262 COVERAGE:0.95; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns009bC08f.b,mgns
Length = 366
Score = 22.6 bits (43), Expect = 2.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1 / -1
Query: 37 SRPPRWPARPLYSP 78
SRPPRW R +P
Sbjct: 264 SRPPRWHRRSWGTP 223
>CL51CT58CN61 cl51ct58cn61 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001bE05f.b,mgns001
Length = 528
Score = 22.6 bits (43), Expect = 2.9
Identities = 9/22 (40%), Positives = 10/22 (44%)
Frame = -2 / -1
Query: 164 CRAQERHSRREDRGEWPCRGRS 99
CR Q + R WPC RS
Sbjct: 450 CRRQRQR**SHXRCRWPCPRRS 385
>MGNS008CG02F.B mgns008cG02f.b LENGTH:540bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 540
Score = 22.6 bits (43), Expect = 2.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / -3
Query: 17 SALLRSTPALRAGLRARSTPLAAMATT 97
SAL RS PAL + LA MA T
Sbjct: 502 SALTRSPPALLPASSTSLSDLAWMART 422
>MGNS007AD10F.B mgns007aD10f.b LENGTH:503bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 503
Score = 22.6 bits (43), Expect = 2.9
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +2 / -2
Query: 188 HHSKHHQTY 214
HH HHQ Y
Sbjct: 445 HHHNHHQAY 419
>CL235CT247CN253 cl235ct247cn253 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns008cD11f.b,mgns
Length = 537
Score = 22.6 bits (43), Expect = 2.9
Identities = 11/32 (34%), Positives = 18/32 (55%)
Frame = +2 / +3
Query: 17 SALLRSTPALRAGLRARSTPLAAMATTSFVRG 112
S+ RST + R ++ + L++ ATTS G
Sbjct: 180 SSRARSTASWRRATKSINPTLSSSATTSLCTG 275
>CL206CT217CN223 cl206ct217cn223 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:5; ESTS:mgns007bF08f.b,mgns
Length = 731
Score = 22.1 bits (42), Expect = 3.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1 / -1
Query: 492 PXPEPWIPAR 463
P P+PW P R
Sbjct: 386 PSPQPWPPQR 357
>CL62CT70CN73 cl62ct70cn73 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001cA04f.b,mgns002
Length = 492
Score = 22.1 bits (42), Expect = 3.9
Identities = 6/14 (42%), Positives = 6/14 (42%)
Frame = -2 / -1
Query: 137 REDRGEWPCRGRSW 96
R G W CR W
Sbjct: 234 RRSWGCWRCRCCHW 193
>MGNS002BE03F.B mgns002bE03f.b LENGTH:358bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 358
Score = 22.1 bits (42), Expect = 3.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2 / -2
Query: 128 RGEWPCRGRSWW 93
RG+ RGR WW
Sbjct: 108 RGQPRWRGRRWW 73
>MGNS011BA01F.B mgns011bA01f.b LENGTH:291bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 291
Score = 22.1 bits (42), Expect = 3.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 34 NSRPPRWPARPLYSP 78
+SRPPR R + SP
Sbjct: 103 DSRPPRAGIRRVQSP 147
>CL144CT155CN161 cl144ct155cn161 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns002cG01f.b,mgns
Length = 734
Score = 22.1 bits (42), Expect = 3.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1 / -1
Query: 40 RPPRWPA 60
RP RWPA
Sbjct: 455 RPHRWPA 435
>CL183CT194CN200 cl183ct194cn200 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns007aB03f.b,mgns
Length = 695
Score = 21.7 bits (41), Expect = 5.4
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = -2 / -3
Query: 80 RGE*SGRAGQRG 45
RG+ SGR G+RG
Sbjct: 81 RGQRSGRPGRRG 46
>CL53CT60CN63 cl53ct60cn63 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001bE09f.b,mgns001
Length = 680
Score = 21.7 bits (41), Expect = 5.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2 / -1
Query: 170 QRCRAQERHSRREDRGEWPCR 108
+RCR Q H ++ W CR
Sbjct: 608 RRCRYQTPHQVSKNWVLWACR 546
>MGNS012AB02F.B mgns012aB02f.b LENGTH:415bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 415
Score = 21.7 bits (41), Expect = 5.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / -2
Query: 395 CPRAHHHRPYR 363
CPRA +RP R
Sbjct: 330 CPRARQNRPSR 298
>MGNS011CF04F.B mgns011cF04f.b LENGTH:511bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 511
Score = 21.7 bits (41), Expect = 5.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3 / -3
Query: 3 LPLWLPLFF 29
+PLWL +FF
Sbjct: 212 MPLWLVVFF 186
>CL41CT48CN51 cl41ct48cn51 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001bC02f.b,mgns002
Length = 775
Score = 21.7 bits (41), Expect = 5.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2 / -2
Query: 173 GQRCRAQERHS 141
GQRCRA R S
Sbjct: 492 GQRCRASRRTS 460
>MGNS010AG10F.B mgns010aG10f.b LENGTH:487bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 487
Score = 21.7 bits (41), Expect = 5.4
Identities = 7/18 (38%), Positives = 12/18 (65%)
Frame = +1 / -3
Query: 58 ARPLYSPRGYGYHQLRPR 111
A+ +SP GY +++R R
Sbjct: 71 AKKAFSPEGYQCYEVRER 18
>MGNS009DC05F.B mgns009dC05f.b LENGTH:461bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 461
Score = 21.7 bits (41), Expect = 5.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1 / +1
Query: 310 PRRWSRQPLPLL 345
PRRW R P LL
Sbjct: 397 PRRWMRLPRRLL 432
>CL33CT39CN42 cl33ct39cn42 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6;
ESTS:mgns001bA01f.b,mgns001
Length = 1060
Score = 21.7 bits (41), Expect = 5.5
Identities = 8/11 (72%), Positives = 11/11 (99%)
Frame = +2 / +1
Query: 11 MASALLRSTPA 43
+AS+LLRSTP+
Sbjct: 838 LASSLLRSTPS 870
>MGNS012CB10F.B mgns012cB10f.b LENGTH:388bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 388
Score = 21.2 bits (40), Expect = 7.4
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +3 / +1
Query: 135 PTTMALLSPTSL 170
PTT LL PT+L
Sbjct: 193 PTTACLLRPTAL 228
>CL101CT112CN116 cl101ct112cn116 COVERAGE:0.96; CRAWID: 1;
TOTAL_ESTS:8; ESTS:mgns001dH03f.b,mgns
Length = 626
Score = 21.2 bits (40), Expect = 7.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 313 RRWSRQPLPLL 345
RR SRQ LPLL
Sbjct: 424 RRMSRQMLPLL 392
>CL61CT68CN71 cl61ct68cn71 COVERAGE:1.0; CRAWID: 1; TOTAL_ESTS:1;
ESTS:mgns013bE11f.b; LENGTH:
Length = 260
Score = 21.2 bits (40), Expect = 7.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 153 LSPTSLARSWSF 188
L PTS+ ++W F
Sbjct: 16 LQPTSIVQTWPF 51
>MGNS012CF12F.B mgns012cF12f.b LENGTH:116bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 116
Score = 21.2 bits (40), Expect = 7.4
Identities = 4/7 (57%), Positives = 5/7 (71%)
Frame = -2 / -3
Query: 116 PCRGRSW 96
P +GR W
Sbjct: 90 PVKGRRW 70
>CL98CT109CN113 cl98ct109cn113 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgns001dG03f.b,mgns0
Length = 573
Score = 21.2 bits (40), Expect = 7.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2 / -2
Query: 164 CRAQERHSRREDRGEWPCRG 105
C R SRR+ WP +G
Sbjct: 263 CGEAARCSRRQGWAWWPMKG 204
>CL26CT32CN35 cl26ct32cn35 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:5;
ESTS:mgns001aF01f.b,mgns002
Length = 569
Score = 21.2 bits (40), Expect = 7.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -2 / -2
Query: 161 RAQERHSRREDRGEWP 114
R ++ +R RG+WP
Sbjct: 154 RQAQQSGKRRYRGQWP 107
>MGNS007CF07F.B mgns007cF07f.b LENGTH:358bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 358
Score = 21.2 bits (40), Expect = 7.4
Identities = 7/18 (38%), Positives = 9/18 (49%)
Frame = +1 / -1
Query: 304 QLPRRWSRQPLPLLGEPC 357
+LP W LP+ PC
Sbjct: 352 RLPSLWPSSMLPMPTCPC 299
>MGNS012CA06F.B mgns012cA06f.b LENGTH:368bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 368
Score = 21.2 bits (40), Expect = 7.4
Identities = 4/6 (66%), Positives = 4/6 (66%)
Frame = -2 / -2
Query: 113 CRGRSW 96
CRG W
Sbjct: 184 CRGLDW 167
>MGNS007DA04F.B mgns007dA04f.b LENGTH:438bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 438
Score = 21.2 bits (40), Expect = 7.4
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -2 / +1
Query: 173 GQRCRAQERHSRREDRGEWPCRGRSWW*P*PRG 75
GQR R+ RGE P + +W P G
Sbjct: 322 GQRYRSGWPADHDHGRGELPWFPQGYWRPGTHG 420
>MGNS011BA10F.B mgns011bA10f.b LENGTH:420bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 420
Score = 21.2 bits (40), Expect = 7.4
Identities = 10/28 (35%), Positives = 11/28 (38%)
Frame = +1 / -3
Query: 37 SRPPRWPARPLYSPRGYGYHQLRPRQGH 120
S P WP P SP +G GH
Sbjct: 310 SPPAAWPPSPPASPCWHGLPSCIGPWGH 227
>MGNS001DE02F.B mgns001dE02f.b LENGTH:418bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 418
Score = 21.2 bits (40), Expect = 7.4
Identities = 8/22 (36%), Positives = 11/22 (49%)
Frame = -2 / -2
Query: 167 RCRAQERHSRREDRGEWPCRGR 102
RC + + + RG W CR R
Sbjct: 288 RC*SGHSS*QGQPRGPWACRQR 223
>MGNS009CC09F.B mgns009cC09f.b LENGTH:243bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 243
Score = 21.2 bits (40), Expect = 7.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 3 LPLWLPLFFD 32
L WLPLF+D
Sbjct: 178 LQSWLPLFWD 207
>CL198CT209CN215 cl198ct209cn215 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns007bC03f.b,mgns
Length = 489
Score = 21.2 bits (40), Expect = 7.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2 / -1
Query: 167 RCRAQERHSRREDRGEWPCR 108
RCR R R + RG W R
Sbjct: 429 RCRRWRRCWRGQRRGPWEQR 370
>CL203CT214CN220 cl203ct214cn220 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007bE10f.b,mgns
Length = 658
Score = 21.2 bits (40), Expect = 7.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 62 ARSTPLAAMATTS 100
ARSTPL+A T S
Sbjct: 133 ARSTPLSASRTRS 171
Database: /phillip/Ncr/MgrN_SP
Posted date: Feb 18, 2002 5:07 PM
Number of letters in database: 496,015
Number of sequences in database: 1206
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 450804
Number of Sequences: 1206
Number of extensions: 5572
Number of successful extensions: 485
Number of sequences better than 10.0: 67
length of query: 166
length of database: 165,338
effective HSP length: 34
effective length of query: 131
effective length of database: 124,334
effective search space: 16287754
effective search space used: 16287754
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 39 (20.8 bits)