The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.

BLASTX 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FgrNT3_10_E10.seq Fgr_10_E10 LENGTH:556bp ; DIRECTION:5
; CLONE:Fgr_10_E10 ; CLONELIB: n/a ; TISSU
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF
           907,641 sequences; 284,333,007 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF26462.1|AC007323_3  (AC007323) T25K16.10 [Arabidopsis ...    32   2.6  
ref|NP_563618.1|  (NM_099993) expressed protein [Arabidopsis...    32   2.6  
ref|NP_149387.1|  (NC_003029) heme maturase [Tetrahymena the...    32   4.5  
ref|NP_051152.1|  (NC_000946) ribosomal protein S4 [Cafeteri...    31   5.9  

>gb|AAF26462.1|AC007323_3 (AC007323) T25K16.10 [Arabidopsis thaliana]
          Length = 527

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 202 LLRSCIPPCRRIDS*IEPKYQKDIKRYSYFRR*PFLYNHHSFTAK 336
           L+RS  P C+R     +P+  +D   YSY    P L +++SFTA+
Sbjct: 369 LIRSASPRCQR-----DPREDRDRAAYSYTSNTPSLRSNYSFTAR 408



>ref|NP_563618.1| (NM_099993) expressed protein [Arabidopsis thaliana]
          Length = 364

 Score = 32.3 bits (72), Expect = 2.6
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 202 LLRSCIPPCRRIDS*IEPKYQKDIKRYSYFRR*PFLYNHHSFTAK 336
           L+RS  P C+R     +P+  +D   YSY    P L +++SFTA+
Sbjct: 206 LIRSASPRCQR-----DPREDRDRAAYSYTSNTPSLRSNYSFTAR 245



>ref|NP_149387.1| (NC_003029) heme maturase [Tetrahymena thermophila]
 gb|AAK77584.1|AF396436_24 (AF396436) heme maturase [Tetrahymena thermophila]
          Length = 518

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 24/89 (26%), Positives = 45/89 (49%), Gaps = 7/89 (7%)
 Frame = +3

Query: 3   STSIISCFLSFDLTFTRRKNKACIFTSSYRESFTIATL-SIVSTLLRQCALILHLINH-- 173
           +++I+   +  +L +  + N   IF  SY  +F +  L SI   +L Q ++I   +N   
Sbjct: 298 TSNIVFYIIIINLFYNFKVNTLQIFIYSYINTFILLVLCSIFYIILYQPSIIKLYMNFKL 357

Query: 174 ----FSHIFIHSFTTSFLYPTLSQDRFIN 248
                S++FI S  T F Y ++ + +FI+
Sbjct: 358 IFSWISNVFIISLKTFFFYRSIKKYKFIH 386



>ref|NP_051152.1| (NC_000946) ribosomal protein S4 [Cafeteria roenbergensis]
 gb|AAF05803.1|AF193903_26 (AF193903) ribosomal protein S4 [Cafeteria roenbergensis]
          Length = 1641

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
 Frame = +1

Query: 265  KDIKRYSYFR---R*PFLYNHHSFTAKPVNVKSLSFSKNRQN*IAPDVTVSALEAGSWKQ 435
            K  +RY++ R   +  F+ N      + VNVK L+    ++N I     +S+ +  SW++
Sbjct: 1012 KKRRRYTFSRLLKKVKFVKNQKIQVKRKVNVKKLTNFLLKRNFIR---NLSSFKLNSWRR 1068

Query: 436  KKGLDSFVSSQYNTHIFRN 492
            K+G + F    +N +I +N
Sbjct: 1069 KRGKNFFNLVNFNENIQKN 1087



  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 29, 2002  2:16 AM
  Number of letters in database: 284,333,007
  Number of sequences in database:  907,641
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.267   0.0410 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,467,970
Number of Sequences: 907641
Number of extensions: 4843422
Number of successful extensions: 12706
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12704
length of database: 284,333,007
effective HSP length: 113
effective length of database: 181,769,574
effective search space used: 12905639754
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)