TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrNT3/stackpack/blast_Mgr-N/FgrNT3_10_E19.seq
(663 letters)
Database: /phillip/Ncr/MgrN_SP
1206 sequences; 496,015 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CL163CT174CN180 cl163ct174cn180 COVERAGE:0.99; CRAWID: 1; TOTAL_... 29 0.047
MGNS004DD10F.B mgns004dD10f.b LENGTH:332bp ; DIRECTION:0 ; CLONE... 27 0.17
MGNS007AC10F.B mgns007aC10f.b LENGTH:484bp ; DIRECTION:0 ; CLONE... 27 0.20
CL6CT6CN6 cl6ct6cn6 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:15; EST... 27 0.23
MGNS013AC07F.B mgns013aC07f.b LENGTH:341bp ; DIRECTION:0 ; CLONE... 27 0.23
CL37CT43CN46 cl37ct43cn46 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:1... 26 0.32
CL258CT270CN276 cl258ct270cn276 COVERAGE:0.99; CRAWID: 1; TOTAL_... 26 0.44
MGNS011DA02F.B mgns011dA02f.b LENGTH:457bp ; DIRECTION:0 ; CLONE... 25 0.83
MGNS010CC06F.B mgns010cC06f.b LENGTH:387bp ; DIRECTION:0 ; CLONE... 25 0.83
MGNS013CE09F.B mgns013cE09f.b LENGTH:409bp ; DIRECTION:0 ; CLONE... 24 1.1
CL87CT97CN101 cl87ct97cn101 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS... 24 1.6
MGNS007AC08F.B mgns007aC08f.b LENGTH:531bp ; DIRECTION:0 ; CLONE... 24 1.6
CL66CT74CN78 cl66ct74cn78 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6... 24 1.6
MGNS008DC09F.B mgns008dC09f.b LENGTH:515bp ; DIRECTION:0 ; CLONE... 24 1.8
MGNS010BB04F.B mgns010bB04f.b LENGTH:517bp ; DIRECTION:0 ; CLONE... 24 2.1
MGNS012CE01F.B mgns012cE01f.b LENGTH:380bp ; DIRECTION:0 ; CLONE... 24 2.1
CL208CT219CN225 cl208ct219cn225 COVERAGE:0.99; CRAWID: 1; TOTAL_... 24 2.1
MGNS001BF04F.B mgns001bF04f.b LENGTH:544bp ; DIRECTION:0 ; CLONE... 24 2.1
MGNS001DE11F.B mgns001dE11f.b LENGTH:425bp ; DIRECTION:0 ; CLONE... 23 2.9
CL51CT58CN61 cl51ct58cn61 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3... 23 2.9
MGNS002AH01F.B mgns002aH01f.b LENGTH:464bp ; DIRECTION:0 ; CLONE... 23 2.9
MGNS008CG02F.B mgns008cG02f.b LENGTH:540bp ; DIRECTION:0 ; CLONE... 23 2.9
MGNS010CE07F.B mgns010cE07f.b LENGTH:283bp ; DIRECTION:0 ; CLONE... 23 2.9
MGNS011BD09F.B mgns011bD09f.b LENGTH:328bp ; DIRECTION:0 ; CLONE... 23 2.9
MGNS009BE05F.B mgns009bE05f.b LENGTH:436bp ; DIRECTION:0 ; CLONE... 23 4.0
CL35CT41CN44 cl35ct41cn44 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:4... 23 4.0
CL160CT171CN177 cl160ct171cn177 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 4.0
MGNS007AF12F.B mgns007aF12f.b LENGTH:477bp ; DIRECTION:0 ; CLONE... 23 4.0
MGNS007CA07F.B mgns007cA07f.b LENGTH:478bp ; DIRECTION:0 ; CLONE... 23 4.0
MGNS012AE10F.B mgns012aE10f.b LENGTH:417bp ; DIRECTION:0 ; CLONE... 23 4.0
MGNS009DD08F.B mgns009dD08f.b LENGTH:320bp ; DIRECTION:0 ; CLONE... 23 4.0
MGNS010BC07F.B mgns010bC07f.b LENGTH:450bp ; DIRECTION:0 ; CLONE... 23 4.0
MGNS002BE12F.B mgns002bE12f.b LENGTH:378bp ; DIRECTION:0 ; CLONE... 23 4.0
CL187CT198CN204 cl187ct198cn204 COVERAGE:0.99; CRAWID: 1; TOTAL_... 23 4.0
MGNS009DF04F.B mgns009dF04f.b LENGTH:433bp ; DIRECTION:0 ; CLONE... 23 4.0
MGNS001DA06F.B mgns001dA06f.b LENGTH:259bp ; DIRECTION:0 ; CLONE... 23 4.0
MGNS006BH04F.B mgns006bH04f.b LENGTH:456bp ; DIRECTION:0 ; CLONE... 23 4.7
MGNS011AH03F.B mgns011aH03f.b LENGTH:335bp ; DIRECTION:0 ; CLONE... 23 4.7
MGNS011AD05F.B mgns011aD05f.b LENGTH:417bp ; DIRECTION:0 ; CLONE... 22 5.6
CL108CT119CN124 cl108ct119cn124 COVERAGE:0.98; CRAWID: 1; TOTAL_... 22 5.6
MGNS001BB02F.B mgns001bB02f.b LENGTH:562bp ; DIRECTION:0 ; CLONE... 22 5.6
CL210CT221CN227 cl210ct221cn227 COVERAGE:0.99; CRAWID: 1; TOTAL_... 22 5.6
MGNS010CD01F.B mgns010cD01f.b LENGTH:224bp ; DIRECTION:0 ; CLONE... 22 5.6
MGNS010AE12F.B mgns010aE12f.b LENGTH:349bp ; DIRECTION:0 ; CLONE... 22 5.6
CL109CT120CN125 cl109ct120cn125 COVERAGE:0.98; CRAWID: 1; TOTAL_... 22 5.6
MGNS011AA10F.B mgns011aA10f.b LENGTH:468bp ; DIRECTION:0 ; CLONE... 22 5.6
MGNS009AF10F.B mgns009aF10f.b LENGTH:392bp ; DIRECTION:0 ; CLONE... 22 5.6
MGNS013DC04F.B mgns013dC04f.b LENGTH:469bp ; DIRECTION:0 ; CLONE... 22 5.6
MGNS010BG03F.B mgns010bG03f.b LENGTH:363bp ; DIRECTION:0 ; CLONE... 22 5.6
CL203CT214CN220 cl203ct214cn220 COVERAGE:0.99; CRAWID: 1; TOTAL_... 22 5.6
CL130CT141CN146 cl130ct141cn146 COVERAGE:0.98; CRAWID: 1; TOTAL_... 22 5.6
CL36CT42CN45 cl36ct42cn45 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:3... 22 7.6
CL45CT52CN55 cl45ct52cn55 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:4... 22 7.6
CL118CT129CN134 cl118ct129cn134 COVERAGE:0.99; CRAWID: 1; TOTAL_... 22 7.6
MGNS002CF01F.B mgns002cF01f.b LENGTH:495bp ; DIRECTION:0 ; CLONE... 22 7.6
CL259CT271CN277 cl259ct271cn277 COVERAGE:0.98; CRAWID: 1; TOTAL_... 22 7.6
MGNS010BD08F.B mgns010bD08f.b LENGTH:530bp ; DIRECTION:0 ; CLONE... 22 7.6
MGNS007BE04F.B mgns007bE04f.b LENGTH:498bp ; DIRECTION:0 ; CLONE... 22 7.6
MGNS001DG05F.B mgns001dG05f.b LENGTH:391bp ; DIRECTION:0 ; CLONE... 22 7.6
CL181CT192CN198 cl181ct192cn198 COVERAGE:0.99; CRAWID: 1; TOTAL_... 22 7.6
MGNS011AA04F.B mgns011aA04f.b LENGTH:472bp ; DIRECTION:0 ; CLONE... 22 7.6
MGNS007DE11F.B mgns007dE11f.b LENGTH:474bp ; DIRECTION:0 ; CLONE... 22 7.6
CL116CT127CN132 cl116ct127cn132 COVERAGE:0.99; CRAWID: 1; TOTAL_... 22 7.6
MGNS012AA03F.B mgns012aA03f.b LENGTH:343bp ; DIRECTION:0 ; CLONE... 22 7.6
MGNS008CH10F.B mgns008cH10f.b LENGTH:402bp ; DIRECTION:0 ; CLONE... 22 8.9
MGNS013BH05F.B mgns013bH05f.b LENGTH:208bp ; DIRECTION:0 ; CLONE... 22 8.9
MGNS002CA05F.B mgns002cA05f.b LENGTH:349bp ; DIRECTION:0 ; CLONE... 22 8.9
>CL163CT174CN180 cl163ct174cn180 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:16; ESTS:mgns004aB09f.b,mgn
Length = 497
Score = 29.0 bits (57), Expect = 0.047
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2 / -1
Query: 596 RRATC*GLQEQRQRQCGGNRQPCQPW 519
RR G +Q+QR CGG RQ W
Sbjct: 290 RRCRLHGENQQQQRCCGGPRQHQCAW 213
Score = 21.7 bits (41), Expect = 7.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2 / +1
Query: 485 CW**TWGRQR*RDGS*Q 435
CW W RQR R S Q
Sbjct: 259 CWFSPWSRQRRRRSSTQ 309
>MGNS004DD10F.B mgns004dD10f.b LENGTH:332bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 332
Score = 27.2 bits (53), Expect = 0.17
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2 / +3
Query: 314 CPSFCLRFLLGTASG*MQQRPW*RMKSQPARHPKLRFRS 198
C + C RF+ + S + + PW R ++ R ++ F S
Sbjct: 81 CGTCCTRFISTSGSNMLSKIPWRRSSTRVERVSRMSFLS 197
>MGNS007AC10F.B mgns007aC10f.b LENGTH:484bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 484
Score = 27.2 bits (53), Expect = 0.20
Identities = 12/28 (42%), Positives = 16/28 (56%)
Frame = +2 / -1
Query: 317 VGLLVGNSEEDTKKKKRVLVTNDLTYQV 400
VGL +GNS++ KK K T YQ+
Sbjct: 139 VGLSLGNSKKKKKKTKFYSSTPSFVYQI 56
Score = 25.3 bits (49), Expect = 0.60
Identities = 13/31 (41%), Positives = 14/31 (44%)
Frame = -1 / +3
Query: 396 W*VKSLVTRTRFFFLVSSSEFPTNSPTLSQL 304
W* K V F F EFP SPT +L
Sbjct: 60 W*TKDGVEE*NFVFFFFFFEFPKLSPTKKKL 152
>CL6CT6CN6 cl6ct6cn6 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:15;
ESTS:mgns001aA09f.b,mgns001aC
Length = 983
Score = 26.7 bits (52), Expect = 0.23
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = -2 / -1
Query: 548 GGNRQPCQPWSA 513
GG++QPC WSA
Sbjct: 389 GGSQQPCSGWSA 354
Score = 25.3 bits (49), Expect = 0.60
Identities = 12/37 (32%), Positives = 16/37 (42%)
Frame = +1 / -1
Query: 427 QRHCQLPSLHLWRPQVYYQQRPSASHPSQADQGWHGC 537
Q+ C S WR Y+ + HPS+ G GC
Sbjct: 380 QQPCSGWSALRWRRGGYHGRARRGRHPSRYRHGARGC 270
>MGNS013AC07F.B mgns013aC07f.b LENGTH:341bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 341
Score = 26.7 bits (52), Expect = 0.23
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1 / +1
Query: 601 CIWSSREXTLCCQSCCQRP 657
C WS R T C +S RP
Sbjct: 277 CRWSPRRRTRCARSTWPRP 333
>CL37CT43CN46 cl37ct43cn46 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:11;
ESTS:mgns001bB01f.b,mgns00
Length = 986
Score = 26.3 bits (51), Expect = 0.32
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1 / +1
Query: 217 GCLAG*DFILHQGRCCIYPEAVPRRNR 297
GCL D HQG C PE PR +R
Sbjct: 844 GCLVRGDQGRHQGGCRRPPEGHPRVHR 924
>CL258CT270CN276 cl258ct270cn276 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns010aE10f.b,mgns
Length = 768
Score = 25.8 bits (50), Expect = 0.44
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1 / -2
Query: 582 LRPSGAASTAVWGQ*TAMPALVSLRRVAC*GSLLVIDLGPPK 457
++PS ++ST+ T++P+LV+ + S L I P+
Sbjct: 587 MKPSASSSTSALAAATSLPSLVASASASVFVSRLAISTCLPE 462
>MGNS011DA02F.B mgns011dA02f.b LENGTH:457bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 457
Score = 24.9 bits (48), Expect = 0.83
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / +2
Query: 245 RMKSQPARHPKLR 207
R SQP RHP LR
Sbjct: 164 RRTSQPTRHPSLR 202
>MGNS010CC06F.B mgns010cC06f.b LENGTH:387bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 387
Score = 24.9 bits (48), Expect = 0.83
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 129 SDFVPPVILQATQSHPL 179
+DFV P++ + SHPL
Sbjct: 22 ADFVRPLLFHPSSSHPL 72
>MGNS013CE09F.B mgns013cE09f.b LENGTH:409bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 409
Score = 24.4 bits (47), Expect = 1.1
Identities = 9/21 (42%), Positives = 12/21 (56%)
Frame = +3 / -3
Query: 315 MLDCWLETRKKTPRRRSEFWL 377
+L WL T ++ RR FWL
Sbjct: 317 VLSTWLVTLRRHVRRVRRFWL 255
>CL87CT97CN101 cl87ct97cn101 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:38; ESTS:mgns001dB07f.b,mgns0
Length = 622
Score = 24.0 bits (46), Expect = 1.6
Identities = 7/13 (53%), Positives = 8/13 (60%)
Frame = -2 / +1
Query: 533 PCQPWSA*EGWLA 495
P PW * GWL+
Sbjct: 109 PAYPWQG*PGWLS 147
>MGNS007AC08F.B mgns007aC08f.b LENGTH:531bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 531
Score = 24.0 bits (46), Expect = 1.6
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1 / -2
Query: 478 YQQRPSASHPSQADQGWHG 534
Y Q PS+ QGW G
Sbjct: 350 YHQWPSSCE*HGWQQGWKG 294
Score = 21.7 bits (41), Expect = 7.6
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = -2 / -2
Query: 527 QPWSA*EGWLAEGRCW**TWG 465
Q + *E W + CW* T G
Sbjct: 494 QSCTR*ESWWSRKSCW*RTQG 432
>CL66CT74CN78 cl66ct74cn78 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:6;
ESTS:mgns001cB09f.b,mgns001
Length = 491
Score = 24.0 bits (46), Expect = 1.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2 / -3
Query: 563 RQRQCGGNRQPCQP 522
R R+CG PC+P
Sbjct: 450 RCRRCGARSSPCRP 409
>MGNS008DC09F.B mgns008dC09f.b LENGTH:515bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 515
Score = 24.0 bits (46), Expect = 1.8
Identities = 7/15 (46%), Positives = 11/15 (72%)
Frame = +2 / +1
Query: 506 LLKLTKAGMAVYCPH 550
LL ++ G ++YCPH
Sbjct: 274 LLSRSRLGSSLYCPH 318
>MGNS010BB04F.B mgns010bB04f.b LENGTH:517bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 517
Score = 23.5 bits (45), Expect = 2.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1 / -1
Query: 403 YGCN*ARCQRHCQLPSLHLWRP 468
Y C A+CQ H P L +RP
Sbjct: 274 YQCWRAKCQEHAC*PRLIEYRP 209
Score = 21.7 bits (41), Expect(2) = 3.6
Identities = 5/13 (38%), Positives = 7/13 (53%)
Frame = +1 / -1
Query: 1 HTCWKHSCYERFC 39
+ CW+ C E C
Sbjct: 274 YQCWRAKCQEHAC 236
Score = 18.9 bits (35), Expect(2) = 3.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +3 / -1
Query: 75 IDYYPRLSRDITS 113
I+Y P R I+S
Sbjct: 223 IEYRPNQIRTISS 185
>MGNS012CE01F.B mgns012cE01f.b LENGTH:380bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 380
Score = 23.5 bits (45), Expect = 2.1
Identities = 17/51 (33%), Positives = 23/51 (44%)
Frame = -1 / -2
Query: 423 SCSIASIATW*VKSLVTRTRFFFLVSSSEFPTNSPTLSQLLSAISSGYSFW 271
S SI + W*V +R SSS++P S + + L I S FW
Sbjct: 325 SFSIFFGSPW*VSMNWSRQSAI*SQSSSDWPVLSSSGIRYLDWIMSNSDFW 173
>CL208CT219CN225 cl208ct219cn225 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007cA09f.b,mgns
Length = 672
Score = 23.5 bits (45), Expect = 2.1
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = +1 / +1
Query: 505 PSQADQGWHGCL 540
PSQA+QG GC+
Sbjct: 397 PSQANQGNEGCI 432
>MGNS001BF04F.B mgns001bF04f.b LENGTH:544bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 544
Score = 23.5 bits (45), Expect = 2.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1 / +2
Query: 598 YCIWSSREXTLCCQSCC 648
YC WS + L + CC
Sbjct: 2 YCSWSLLKSLLFRRQCC 52
>MGNS001DE11F.B mgns001dE11f.b LENGTH:425bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 425
Score = 23.1 bits (44), Expect = 2.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 603 TISASHVLRPSGAASTAVWGQ*TAMPALVSLRRVA 499
T S+ P G + V G+ +P L+SLR+ +
Sbjct: 378 TPSSDAQTSPDGPSGMTVAGRARGVPCLLSLRQAS 274
>CL51CT58CN61 cl51ct58cn61 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001bE05f.b,mgns001
Length = 528
Score = 23.1 bits (44), Expect = 2.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1 / -1
Query: 394 PSCYGCN*ARCQRHCQLPS 450
P C+ C * RC++ PS
Sbjct: 228 PRCWRCT*YRCRKR*HPPS 172
>MGNS002AH01F.B mgns002aH01f.b LENGTH:464bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 464
Score = 23.1 bits (44), Expect = 2.9
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = +1 / -3
Query: 247 HQGRCCIYPEAVPRRNRRQKL 309
H G C + PRR R Q+L
Sbjct: 423 HAGECDGLIHSAPRRGRSQRL 361
>MGNS008CG02F.B mgns008cG02f.b LENGTH:540bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 540
Score = 23.1 bits (44), Expect = 2.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 226 PGTPSSAFA 200
P TPSSA+A
Sbjct: 115 PSTPSSAWA 141
>MGNS010CE07F.B mgns010cE07f.b LENGTH:283bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 283
Score = 23.1 bits (44), Expect = 2.9
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = +1 / +2
Query: 610 SSREXTLCCQSCC 648
SSR T CC+S C
Sbjct: 194 SSRPSTSCCRSRC 232
>MGNS011BD09F.B mgns011bD09f.b LENGTH:328bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 328
Score = 23.1 bits (44), Expect = 2.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / +1
Query: 247 HQGRCCIY 270
HQG CC+Y
Sbjct: 184 HQGPCCLY 207
>MGNS009BE05F.B mgns009bE05f.b LENGTH:436bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 436
Score = 22.6 bits (43), Expect = 4.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3 / -1
Query: 403 SNLVGQVISNQNSLLLLGVFFRVSNQQSN 317
++L+ V+++ SLLL + R+ QQS+
Sbjct: 166 ASLLLNVLNHDISLLLHAIISRLGQQQSS 80
>CL35CT41CN44 cl35ct41cn44 COVERAGE:0.99; CRAWID: 1; TOTAL_ESTS:4;
ESTS:mgns001bA09f.b,mgns002
Length = 724
Score = 22.6 bits (43), Expect = 4.0
Identities = 12/32 (37%), Positives = 17/32 (52%)
Frame = -1 / -2
Query: 597 SASHVLRPSGAASTAVWGQ*TAMPALVSLRRV 502
S S LRP S+A+ + A+ SLRR+
Sbjct: 354 SYSLTLRPRSRISSALGPRTVTWTAIFSLRRI 259
>CL160CT171CN177 cl160ct171cn177 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns004aA12f.b,mgns
Length = 460
Score = 22.6 bits (43), Expect = 4.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1 / +1
Query: 610 SSREXTLCCQSCCQRP 657
S+R T C Q C RP
Sbjct: 136 SARTRTACTQVTCSRP 183
>MGNS007AF12F.B mgns007aF12f.b LENGTH:477bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 477
Score = 22.6 bits (43), Expect = 4.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1 / -1
Query: 460 WRPQVYYQQRPSASHP 507
W+P+ ++RP A HP
Sbjct: 174 WQPRKQ*RERPLALHP 127
>MGNS007CA07F.B mgns007cA07f.b LENGTH:478bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 478
Score = 22.6 bits (43), Expect = 4.0
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1 / -2
Query: 7 CWKHSCYER 33
CW+HSC R
Sbjct: 150 CWEHSCVLR 124
>MGNS012AE10F.B mgns012aE10f.b LENGTH:417bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 417
Score = 22.6 bits (43), Expect = 4.0
Identities = 7/16 (43%), Positives = 9/16 (55%)
Frame = -2 / +2
Query: 560 QRQCGGNRQPCQPWSA 513
+R C R P + WSA
Sbjct: 314 RRDCKAERTPARSWSA 361
>MGNS009DD08F.B mgns009dD08f.b LENGTH:320bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 320
Score = 22.6 bits (43), Expect = 4.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1 / +3
Query: 277 AVPRRNRRQKLGQCWT 324
+VPR + K QCWT
Sbjct: 99 SVPRLSSSIKTTQCWT 146
>MGNS010BC07F.B mgns010bC07f.b LENGTH:450bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 450
Score = 22.6 bits (43), Expect = 4.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2 / -1
Query: 350 CLLPSFQPTVQHCPSFCLRFLLG 282
C LPS + P FCL + G
Sbjct: 423 CFLPSATSMRRKRPRFCLSYSAG 355
>MGNS002BE12F.B mgns002bE12f.b LENGTH:378bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 378
Score = 22.6 bits (43), Expect = 4.0
Identities = 7/12 (58%), Positives = 9/12 (74%)
Frame = -3 / +2
Query: 217 PSSAFAHFG*VC 182
P+SA+ H G VC
Sbjct: 158 PTSAYVHLGKVC 193
>CL187CT198CN204 cl187ct198cn204 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007aD02f.b,mgns
Length = 852
Score = 22.6 bits (43), Expect = 4.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +1 / -3
Query: 631 CCQSCCQRPF 660
CC CC RP+
Sbjct: 583 CCCCCCWRPW 554
>MGNS009DF04F.B mgns009dF04f.b LENGTH:433bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 433
Score = 22.6 bits (43), Expect = 4.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3 / -2
Query: 526 SLGQLEKGGLLRVVVGNRLGAAKD 455
SLG L L VVG RL KD
Sbjct: 195 SLGSLVGSLLQLAVVGGRLNQVKD 124
>MGNS001DA06F.B mgns001dA06f.b LENGTH:259bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 259
Score = 22.6 bits (43), Expect = 4.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 421 RCQRHCQLPS 450
RC R CQLP+
Sbjct: 105 RCLRQCQLPA 134
>MGNS006BH04F.B mgns006bH04f.b LENGTH:456bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 456
Score = 22.6 bits (43), Expect = 4.7
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = +2 / +1
Query: 17 TVAMRGSVLRLNRQLTRSSHRL 82
T + G RL+RQL R + RL
Sbjct: 97 TTLLSGLRRRLSRQLQRDTLRL 162
>MGNS011AH03F.B mgns011aH03f.b LENGTH:335bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 335
Score = 22.6 bits (43), Expect = 4.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / -2
Query: 542 CPHTAVD 562
CPHTAVD
Sbjct: 163 CPHTAVD 143
>MGNS011AD05F.B mgns011aD05f.b LENGTH:417bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 417
Score = 22.1 bits (42), Expect = 5.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1 / -1
Query: 451 LHLWRPQVYYQQRPSASHPSQADQG 525
+HL R +R +HPS D+G
Sbjct: 75 VHLRRLCSRQTKRKDVNHPSMTDEG 1
>CL108CT119CN124 cl108ct119cn124 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:7; ESTS:mgns002aD09f.b,mgns
Length = 497
Score = 22.1 bits (42), Expect = 5.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2 / +2
Query: 647 QQDWQQSVCS 618
Q+DW+ S CS
Sbjct: 233 QKDWRTSRCS 262
>MGNS001BB02F.B mgns001bB02f.b LENGTH:562bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 562
Score = 22.1 bits (42), Expect = 5.6
Identities = 10/29 (34%), Positives = 12/29 (40%)
Frame = +1 / +3
Query: 430 RHCQLPSLHLWRPQVYYQQRPSASHPSQA 516
RH P W P + QRP A Q+
Sbjct: 96 RHAAAPCDTSWPPGHAWHQRPPARPAGQS 182
>CL210CT221CN227 cl210ct221cn227 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns007cC07f.b,mgns
Length = 530
Score = 22.1 bits (42), Expect = 5.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1 / +2
Query: 348 SSSEFPTNSP 319
S+S FPT SP
Sbjct: 293 STSTFPTRSP 322
>MGNS010CD01F.B mgns010cD01f.b LENGTH:224bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 224
Score = 22.1 bits (42), Expect = 5.6
Identities = 7/13 (53%), Positives = 8/13 (60%)
Frame = +3 / -1
Query: 324 CWLETRKKTPRRR 362
CW + R PRRR
Sbjct: 224 CWSDLRACAPRRR 186
>MGNS010AE12F.B mgns010aE12f.b LENGTH:349bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 349
Score = 22.1 bits (42), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (49%)
Frame = -2 / +2
Query: 236 SQPARHPKLRFRSFWLSVFEGMRLSCLENDRRNK 135
++PARHP R R L V +R RR++
Sbjct: 65 ARPARHPPPRRRPVRLLVPPALRHHVGRRRRRDR 166
>CL109CT120CN125 cl109ct120cn125 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns002aE02f.b,mgns
Length = 320
Score = 22.1 bits (42), Expect = 5.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 94 SHEISHLISRINQ 132
S +ISH I+R NQ
Sbjct: 37 SADISHQITRSNQ 75
>MGNS011AA10F.B mgns011aA10f.b LENGTH:468bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 468
Score = 22.1 bits (42), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = +1 / +3
Query: 247 HQGRCCIYPEAVPRRNRR 300
HQ R + PE +P+R R
Sbjct: 189 HQSRRHLAPEILPKRTTR 242
>MGNS009AF10F.B mgns009aF10f.b LENGTH:392bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 392
Score = 22.1 bits (42), Expect = 5.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1 / +3
Query: 609 PDTISASHVLRPSGAASTAVWGQ*TAMPALVSLR 508
P T A+ + +A+TAV +A+PAL SLR
Sbjct: 261 PTTRLATALTVALPSATTAVVRDTSAVPALRSLR 362
>MGNS013DC04F.B mgns013dC04f.b LENGTH:469bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 469
Score = 22.1 bits (42), Expect = 5.6
Identities = 9/28 (32%), Positives = 10/28 (35%)
Frame = -2 / -2
Query: 563 RQRQCGGNRQPCQPWSA*EGWLAEGRCW 480
R QC P P + W RCW
Sbjct: 351 RHHQCFHVHNPP*PSRSPASWQEPARCW 268
>MGNS010BG03F.B mgns010bG03f.b LENGTH:363bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 363
Score = 22.1 bits (42), Expect = 5.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2 / -1
Query: 230 PARHPKLRFR 201
P+RHP RFR
Sbjct: 186 PSRHPLSRFR 157
>CL203CT214CN220 cl203ct214cn220 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007bE10f.b,mgns
Length = 658
Score = 22.1 bits (42), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2 / -2
Query: 551 CGGNRQPCQPWS 516
CG +RQ Q WS
Sbjct: 570 CGSSRQQTQRWS 535
>CL130CT141CN146 cl130ct141cn146 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:4; ESTS:mgns002bF03f.b,mgns
Length = 1180
Score = 22.1 bits (42), Expect = 5.6
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = -3 / -3
Query: 649 DSRIGNRAXALVRTR 605
D RIG R L +TR
Sbjct: 488 DRRIGRRWGLLAQTR 444
>CL36CT42CN45 cl36ct42cn45 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:3;
ESTS:mgns001bA10f.b,mgns001
Length = 549
Score = 21.7 bits (41), Expect = 7.6
Identities = 6/14 (42%), Positives = 10/14 (70%)
Frame = -2 / +2
Query: 266 MQQRPW*RMKSQPA 225
M+QR W R ++P+
Sbjct: 161 MEQRSWTRRAARPS 202
>CL45CT52CN55 cl45ct52cn55 COVERAGE:0.98; CRAWID: 1; TOTAL_ESTS:4;
ESTS:mgns001bD02f.b,mgns007
Length = 669
Score = 21.7 bits (41), Expect = 7.6
Identities = 7/16 (43%), Positives = 8/16 (49%)
Frame = +1 / -1
Query: 595 RYCIWSSREXTLCCQS 642
R C SR CCQ+
Sbjct: 255 RPCPRKSRTGRPCCQA 208
>CL118CT129CN134 cl118ct129cn134 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns002aH04f.b,mgns
Length = 429
Score = 21.7 bits (41), Expect = 7.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1 / +2
Query: 388 DLPSCYGCN*ARCQRHC 438
D+PS G QRHC
Sbjct: 353 DIPSAAGTGSRERQRHC 403
>MGNS002CF01F.B mgns002cF01f.b LENGTH:495bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 495
Score = 21.7 bits (41), Expect = 7.6
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2 / +1
Query: 536 QPCQPWSA 513
QPC PW A
Sbjct: 430 QPCHPWFA 453
>CL259CT271CN277 cl259ct271cn277 COVERAGE:0.98; CRAWID: 1;
TOTAL_ESTS:3; ESTS:mgns010aF02f.b,mgns
Length = 484
Score = 21.7 bits (41), Expect = 7.6
Identities = 7/15 (46%), Positives = 8/15 (52%)
Frame = +1 / -3
Query: 490 PSASHPSQADQGWHG 534
PS P + GWHG
Sbjct: 362 PSRHPPLKGGGGWHG 318
>MGNS010BD08F.B mgns010bD08f.b LENGTH:530bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 530
Score = 21.7 bits (41), Expect = 7.6
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = +1 / -3
Query: 313 QCWTVGWKLG 342
+CW + W LG
Sbjct: 441 RCWRMSWPLG 412
>MGNS007BE04F.B mgns007bE04f.b LENGTH:498bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 498
Score = 21.7 bits (41), Expect = 7.6
Identities = 10/29 (34%), Positives = 14/29 (47%)
Frame = +1 / +2
Query: 385 LDLPSCYGCN*ARCQRHCQLPSLHLWRPQ 471
L + SC+ RC R + P H RP+
Sbjct: 350 LSVSSCFQSVTMRCGRCTRRPRPHSGRPK 436
>MGNS001DG05F.B mgns001dG05f.b LENGTH:391bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 391
Score = 21.7 bits (41), Expect = 7.6
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +1 / -1
Query: 631 CCQSCCQR 654
CC+ CC R
Sbjct: 106 CCRCCCSR 83
>CL181CT192CN198 cl181ct192cn198 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns007aA06f.b,mgns
Length = 604
Score = 21.7 bits (41), Expect = 7.6
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = -2 / +3
Query: 257 RPW*RMKSQPARHPKLRFRSFWLSVFEGMR 168
RPW P + R WL V G R
Sbjct: 333 RPWLPSLPPPPTTRSIPLRCLWLPVGTGAR 422
>MGNS011AA04F.B mgns011aA04f.b LENGTH:472bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 472
Score = 21.7 bits (41), Expect = 7.6
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 631 CCQSCCQRP 657
CC++ C+RP
Sbjct: 119 CCRASCRRP 145
>MGNS007DE11F.B mgns007dE11f.b LENGTH:474bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 474
Score = 21.7 bits (41), Expect = 7.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 595 RYCIWSSRE 621
RYC W++RE
Sbjct: 166 RYCRWAARE 192
>CL116CT127CN132 cl116ct127cn132 COVERAGE:0.99; CRAWID: 1;
TOTAL_ESTS:2; ESTS:mgns002aG02f.b,mgns
Length = 620
Score = 21.7 bits (41), Expect = 7.6
Identities = 6/15 (40%), Positives = 6/15 (40%)
Frame = +1 / +3
Query: 601 CIWSSREXTLCCQSC 645
C W E CC C
Sbjct: 288 CCWLGGESCECCLEC 332
>MGNS012AA03F.B mgns012aA03f.b LENGTH:343bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 343
Score = 21.7 bits (41), Expect = 7.6
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = +1 / +3
Query: 607 WSSREXTLCCQSCCQ 651
WSSR C + C+
Sbjct: 84 WSSRTAAARCPTFCR 128
>MGNS008CH10F.B mgns008cH10f.b LENGTH:402bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 402
Score = 21.7 bits (41), Expect = 8.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / +2
Query: 50 NRQLTRSSHRLLSAP 94
+RQL HRLL AP
Sbjct: 230 DRQLLGQFHRLLPAP 274
>MGNS013BH05F.B mgns013bH05f.b LENGTH:208bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 208
Score = 21.7 bits (41), Expect = 8.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 338 SEEDTKKKKR 367
+EE+ KKKKR
Sbjct: 66 TEEEEKKKKR 37
>MGNS002CA05F.B mgns002cA05f.b LENGTH:349bp ; DIRECTION:0 ; CLONE:
n/a ; CLONELIB: n/a ; TISSUE:
Length = 349
Score = 21.7 bits (41), Expect = 8.9
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2 / -2
Query: 206 SGAWGAWQVETSSF 247
SG W AW S F
Sbjct: 183 SGCWPAWSWRVSKF 142
Database: /phillip/Ncr/MgrN_SP
Posted date: Feb 18, 2002 5:07 PM
Number of letters in database: 496,015
Number of sequences in database: 1206
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 838895
Number of Sequences: 1206
Number of extensions: 12061
Number of successful extensions: 770
Number of sequences better than 10.0: 72
length of query: 221
length of database: 165,338
effective HSP length: 34
effective length of query: 186
effective length of database: 124,334
effective search space: 23126124
effective search space used: 23126124
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 40 (21.2 bits)