TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrP/stackpack/blast_NcrP/FgrP_1606_F11_K22ZS5.se
q
(457 letters)
Database: /phillip/Ncr/np_est
2682 sequences; 1,147,514 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A2A04NP.R1 a2a04np.r1 26 0.61
A1F04NP.R1 a1f04np.r1 25 0.84
B8C09NP.R1 b8c09np.r1 25 0.84
B5D10NP.R1 b5d10np.r1 25 0.84
B2C02NP.R1 b2c02np.r1 25 1.2
C3H09NP.R1 c3h09np.r1 25 1.2
A1E12NP.R1 a1e12np.r1 24 1.6
B4H06NP.R1 b4h06np.r1 24 2.2
B7D06NP.R1 b7d06np.r1 24 2.2
B7D04NP.R1 b7d04np.r1 24 2.2
A4H05NP.R1 a4h05np.r1 24 3.0
C5D06NP.R1 c5d06np.r1 24 3.0
C3G04NP.R1 c3g04np.r1 24 3.0
B6B06NP.F1 b6b06np.f1 24 3.0
A7H12NP.F1 a7h12np.f1 24 3.0
C1B05NP.F1 c1b05np.f1 24 3.0
B8H08NP.R1 b8h08np.r1 23 4.1
A6D06NP.F1 a6d06np.f1 23 4.1
B2F08NP.F1 b2f08np.f1 23 4.1
C3H11NP.R1 c3h11np.r1 23 4.1
B7F11NP.R1 b7f11np.r1 23 4.1
B6H08NP.R1 b6h08np.r1 23 4.1
B5E02NP.F1 b5e02np.f1 23 4.1
A1C08NP.F1 a1c08np.f1 23 4.1
B3D08NP.R1 b3d08np.r1 23 4.1
A8H10NP.F1 a8h10np.f1 23 5.7
B5B06NP.R1 b5b06np.r1 23 5.7
A7G12NP.R1 a7g12np.r1 23 5.7
C5C01NP.F1 c5c01np.f1 23 5.7
C4F07NP.R1 c4f07np.r1 23 5.7
B1E04NP.R1 b1e04np.r1 23 5.7
C4G06NP.R1 c4g06np.r1 23 5.7
A7H07NP.F1 a7h07np.f1 23 5.7
A7G12NP.F1 a7g12np.f1 23 5.7
B8E09NP.R1 b8e09np.r1 23 5.7
A1C02NP.R1 a1c02np.r1 23 5.7
B2A07NP.F1 b2a07np.f1 23 5.7
A9B11NP.R1 a9b11np.r1 23 5.7
A4E02NP.R1 a4e02np.r1 23 5.7
A7H02NP.R1 a7h02np.r1 22 7.8
C5D05NP.F1 c5d05np.f1 22 7.8
B7E06NP.R1 b7e06np.r1 22 7.8
C5C05NP.R1 c5c05np.r1 22 7.8
A2A05NP.F1 a2a05np.f1 22 7.8
A5E12NP.F1 a5e12np.f1 22 7.8
A2C03NP.F1 a2c03np.f1 22 7.8
A6D11NP.F1 a6d11np.f1 22 7.8
C5H01NP.F1 c5h01np.f1 22 7.8
B2E08NP.R1 b2e08np.r1 22 7.8
A4F05NP.R1 a4f05np.r1 22 7.8
A4C03NP.F1 a4c03np.f1 22 7.8
A7C12NP.F1 a7c12np.f1 22 7.8
A9E10NP.F1 a9e10np.f1 22 7.8
A2G02NP.R1 a2g02np.r1 22 7.8
B8D08NP.R1 b8d08np.r1 22 7.8
A8A05NP.R1 a8a05np.r1 22 7.8
C2F11NP.F1 c2f11np.f1 22 7.8
A1F08NP.F1 a1f08np.f1 22 7.8
C3F01NP.R1 c3f01np.r1 22 7.8
>A2A04NP.R1 a2a04np.r1
Length = 447
Score = 25.8 bits (50), Expect = 0.61
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3 / +2
Query: 195 HRSSQ*IWLKKTPKSLRMI*SLRAEYATPITVRPCCHSR 311
H+S+ + +S R+ + AE+ PI + PC +R
Sbjct: 212 HQSNNSAAINNRTRSSRLANPVAAEFPDPIILLPCLSNR 328
>A1F04NP.R1 a1f04np.r1
Length = 576
Score = 25.3 bits (49), Expect = 0.84
Identities = 10/30 (33%), Positives = 15/30 (49%)
Frame = +1 / +2
Query: 13 LLMATEPWRFSRPGRTRAEDVRHTVTRSSD 102
+L A R RPG + D RH+ +S +
Sbjct: 197 MLTAFSERRLQRPGSPKKRDARHSKRKSRE 286
>B8C09NP.R1 b8c09np.r1
Length = 526
Score = 25.3 bits (49), Expect = 0.84
Identities = 11/24 (45%), Positives = 14/24 (57%)
Frame = -2 / +1
Query: 105 SI*RTSYSMAHIFSPGAAWPRESP 34
S+ R S A +FSP A PR+ P
Sbjct: 16 SLSRVSSFSARVFSPPALVPRQDP 87
>B5D10NP.R1 b5d10np.r1
Length = 453
Score = 25.3 bits (49), Expect = 0.84
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3 / +2
Query: 195 HRSSQ*IWLKKTPKSLRMI*SLRAEYATPITVRPCCHSR 311
H+S+ + +S R+ + AE+ PI + PC +R
Sbjct: 200 HQSNNSSSINNRTRSSRLANPVAAEFPDPIILLPCLSNR 316
>B2C02NP.R1 b2c02np.r1
Length = 416
Score = 24.9 bits (48), Expect = 1.2
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -3 / +3
Query: 257 RLYHPERLWSLLQPYLLARPVPGNISHHSTVQGNQPPRSVYN 132
R +P S L+ ++ R + + +HHS + PRS+++
Sbjct: 123 RCRYPPPSRSFLRTWMRCRSLHQHPTHHSGLSSRYCPRSLHH 248
>C3H09NP.R1 c3h09np.r1
Length = 524
Score = 24.9 bits (48), Expect = 1.2
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -3 / +1
Query: 257 RLYHPERLWSLLQPYLLARPVPGNISHHSTVQGNQPPRSVYN 132
R +P S L+ ++ R + + +HHS + PRS+++
Sbjct: 19 RCRYPPPSRSFLRTWMRCRSLHQHPTHHSGLSSRYCPRSLHH 144
>A1E12NP.R1 a1e12np.r1
Length = 532
Score = 24.4 bits (47), Expect = 1.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1 / +3
Query: 16 LMATEPWRFSRPGRTRAEDVRHTVTRS 96
++ TEP F+RPG A R+ + S
Sbjct: 9 VIMTEPESFNRPGSAAAAATRYFTSSS 89
>B4H06NP.R1 b4h06np.r1
Length = 594
Score = 24.0 bits (46), Expect = 2.2
Identities = 11/23 (47%), Positives = 13/23 (55%)
Frame = +2 / -2
Query: 326 AT*RYRLCLSEDEIVCLGNFGLN 394
A *R CL E V +G FG+N
Sbjct: 209 AC*RNGPCLDEPRQVSMGTFGVN 141
>B7D06NP.R1 b7d06np.r1
Length = 446
Score = 24.0 bits (46), Expect = 2.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 192 RQHISSLNSPRQS 154
R H+SSL+ PRQ+
Sbjct: 73 RHHVSSLSPPRQA 111
>B7D04NP.R1 b7d04np.r1
Length = 431
Score = 24.0 bits (46), Expect = 2.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3 / +1
Query: 230 SLLQPYLLARPVPGNISHHSTVQGNQP 150
S + P LLA P P ++ H + + P
Sbjct: 328 SNMAPMLLAAPTPRRLAKHILIAPSSP 408
>A4H05NP.R1 a4h05np.r1
Length = 560
Score = 23.5 bits (45), Expect = 3.0
Identities = 14/36 (38%), Positives = 16/36 (43%)
Frame = -3 / +3
Query: 257 RLYHPERLWSLLQPYLLARPVPGNISHHSTVQGNQP 150
RL HP L L +PVP S ST N+P
Sbjct: 150 RLNHPPLAKKRLPLGLRGQPVPRLFSPTSTSHHNRP 257
>C5D06NP.R1 c5d06np.r1
Length = 532
Score = 23.5 bits (45), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (49%)
Frame = -3 / +2
Query: 158 NQPPRSVYNASFDGVGSSRSDERVTVWRTSSA 63
NQ P +Y SSRS R T RTSS+
Sbjct: 101 NQLPP*IYPKCAAVPTSSRSTTRATTKRTSSS 196
>C3G04NP.R1 c3g04np.r1
Length = 485
Score = 23.5 bits (45), Expect = 3.0
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = -1 / -2
Query: 79 GAHLQPWCGLAARIA 35
G+ L PWCG R A
Sbjct: 226 GSCLWPWCGFGCRPA 182
>B6B06NP.F1 b6b06np.f1
Length = 369
Score = 23.5 bits (45), Expect = 3.0
Identities = 11/40 (27%), Positives = 16/40 (39%)
Frame = -3 / -3
Query: 200 PVPGNISHHSTVQGNQPPRSVYNASFDGVGSSRSDERVTV 81
P P ++GN P R F G+G S R+ +
Sbjct: 172 PPPTGEGRKEEIKGNAPERERSLEEFIGLGWEESSGRLRI 53
>A7H12NP.F1 a7h12np.f1
Length = 451
Score = 23.5 bits (45), Expect = 3.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 451 TRSINLPNPSDLIKT 407
TRS+ LP+PS L +T
Sbjct: 442 TRSVPLPSPSKLPRT 398
>C1B05NP.F1 c1b05np.f1
Length = 478
Score = 23.5 bits (45), Expect = 3.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 451 TRSINLPNPSDLIKT 407
TRS+ LP+PS L +T
Sbjct: 446 TRSVPLPSPSKLPRT 402
>B8H08NP.R1 b8h08np.r1
Length = 520
Score = 23.1 bits (44), Expect = 4.1
Identities = 7/18 (38%), Positives = 11/18 (60%)
Frame = +2 / -3
Query: 362 EIVCLGNFGLNRELICLD 415
E+ C G G+ L+C+D
Sbjct: 110 EVCCCGGGGVK*RLLCID 57
>A6D06NP.F1 a6d06np.f1
Length = 376
Score = 23.1 bits (44), Expect = 4.1
Identities = 10/24 (41%), Positives = 13/24 (53%)
Frame = -3 / -1
Query: 242 ERLWSLLQPYLLARPVPGNISHHS 171
ER +SL P+L + P N HS
Sbjct: 313 ERRFSLS*PHLTSHPTNINTPTHS 242
>B2F08NP.F1 b2f08np.f1
Length = 490
Score = 23.1 bits (44), Expect = 4.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 82 TVTRSSDRELPTPS 123
T TR +DR+ PTP+
Sbjct: 402 TQTRQTDRQNPTPA 443
>C3H11NP.R1 c3h11np.r1
Length = 513
Score = 23.1 bits (44), Expect = 4.1
Identities = 7/18 (38%), Positives = 11/18 (60%)
Frame = +2 / -1
Query: 362 EIVCLGNFGLNRELICLD 415
E+ C G G+ L+C+D
Sbjct: 120 EVCCCGGGGVK*RLLCID 67
>B7F11NP.R1 b7f11np.r1
Length = 508
Score = 23.1 bits (44), Expect = 4.1
Identities = 7/18 (38%), Positives = 11/18 (60%)
Frame = +2 / -1
Query: 362 EIVCLGNFGLNRELICLD 415
E+ C G G+ L+C+D
Sbjct: 115 EVCCCGGGGVK*RLLCID 62
>B6H08NP.R1 b6h08np.r1
Length = 581
Score = 23.1 bits (44), Expect = 4.1
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = -2 / -1
Query: 66 SPGAAWPRESPRLRCH* 16
S G +W R RLR H*
Sbjct: 377 SEGPSWSRRELRLRAH* 327
>B5E02NP.F1 b5e02np.f1
Length = 340
Score = 23.1 bits (44), Expect = 4.1
Identities = 9/24 (37%), Positives = 13/24 (53%)
Frame = -2 / -1
Query: 207 GSTCARQHISSLNSPRQSTSAKCL 136
G T ++H+ N PRQ +K L
Sbjct: 103 GRTGIKEHVMGANRPRQ*MHSKSL 32
>A1C08NP.F1 a1c08np.f1
Length = 486
Score = 23.1 bits (44), Expect = 4.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 288 VRPCCHSRNFFLRP 329
+R C SRN+F RP
Sbjct: 384 LRSCARSRNWFDRP 425
>B3D08NP.R1 b3d08np.r1
Length = 524
Score = 23.1 bits (44), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 54 PHQG*RCAP 80
PHQG RC+P
Sbjct: 81 PHQGQRCSP 107
>A8H10NP.F1 a8h10np.f1
Length = 474
Score = 22.6 bits (43), Expect = 5.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3 / +1
Query: 137 YNASFDGVGSSRSDERVT 84
YN S VGS+ +ER+T
Sbjct: 73 YNESNASVGSTNINERIT 126
>B5B06NP.R1 b5b06np.r1
Length = 542
Score = 22.6 bits (43), Expect = 5.7
Identities = 10/24 (41%), Positives = 13/24 (53%)
Frame = +1 / +3
Query: 55 RTRAEDVRHTVTRSSDRELPTPSK 126
R+R R TV RSS +PT +
Sbjct: 63 RSRRPKGRQTVLRSSHPSMPTTQR 134
>A7G12NP.R1 a7g12np.r1
Length = 437
Score = 22.6 bits (43), Expect = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3 / -2
Query: 290 NCDWRRIL 267
NC WRRIL
Sbjct: 70 NCGWRRIL 47
>C5C01NP.F1 c5c01np.f1
Length = 522
Score = 22.6 bits (43), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3 / -3
Query: 33 LAILAARPHQG*RCAPYCNSFVRSRTANPIKARI 134
L+ LAAR G P C+ F +S P ++RI
Sbjct: 487 LSRLAARQQYGHLRRPPCHRFRQSNLFLPRESRI 386
>C4F07NP.R1 c4f07np.r1
Length = 171
Score = 22.6 bits (43), Expect = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -2
Query: 66 SPGAAWPR 43
SPG AWPR
Sbjct: 98 SPGPAWPR 75
>B1E04NP.R1 b1e04np.r1
Length = 492
Score = 22.6 bits (43), Expect = 5.7
Identities = 11/23 (47%), Positives = 13/23 (55%)
Frame = -2 / +1
Query: 384 KFPKQTISSSERHRRYL*VASRR 316
+ P T + S RHRR ASRR
Sbjct: 217 RLPTSTNAMSPRHRRRSSRASRR 285
>C4G06NP.R1 c4g06np.r1
Length = 425
Score = 22.6 bits (43), Expect = 5.7
Identities = 4/9 (44%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 107 NCQPHQSSH 133
+C+PH+ H
Sbjct: 201 DCRPHRDPH 227
>A7H07NP.F1 a7h07np.f1
Length = 544
Score = 22.6 bits (43), Expect = 5.7
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = -1 / -1
Query: 115 LAVLDLTNELQYGAHLQPWCG 53
L VLD N + G+ WCG
Sbjct: 424 LDVLDGNNAKRVGSRGSDWCG 362
>A7G12NP.F1 a7g12np.f1
Length = 444
Score = 22.6 bits (43), Expect = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3 / +1
Query: 290 NCDWRRIL 267
NC WRRIL
Sbjct: 394 NCGWRRIL 417
>B8E09NP.R1 b8e09np.r1
Length = 446
Score = 22.6 bits (43), Expect = 5.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3 / +3
Query: 200 PVPGNISHHSTVQGNQPPRS 141
P+P + S +T + NQPP S
Sbjct: 84 PLPSSSSIIATTRINQPPTS 143
>A1C02NP.R1 a1c02np.r1
Length = 446
Score = 22.6 bits (43), Expect = 5.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3 / +2
Query: 218 PYLLARPVPGNISHHSTVQGNQPPRSVYNA 129
PY + + + HH QG P R + +A
Sbjct: 50 PYSTHKNIIQYVQHHQQDQGGCPQRQLCSA 139
>B2A07NP.F1 b2a07np.f1
Length = 455
Score = 22.6 bits (43), Expect = 5.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 110 CQPHQSSHCK 139
CQPHQ H K
Sbjct: 329 CQPHQPDHDK 358
>A9B11NP.R1 a9b11np.r1
Length = 517
Score = 22.6 bits (43), Expect = 5.7
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = -1 / +1
Query: 97 TNELQYGAHLQPWCGLAARIA 35
TN++ PWCG +A
Sbjct: 226 TNDIVLAEFFAPWCGHCEALA 288
>A4E02NP.R1 a4e02np.r1
Length = 451
Score = 22.6 bits (43), Expect = 5.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3 / +1
Query: 218 PYLLARPVPGNISHHSTVQGNQPPRSVYNA 129
PY + + + HH QG P R + +A
Sbjct: 67 PYSTHKNIIQYVQHHQQDQGGCPQRQLCSA 156
>A7H02NP.R1 a7h02np.r1
Length = 543
Score = 22.1 bits (42), Expect = 7.8
Identities = 10/42 (23%), Positives = 21/42 (49%)
Frame = -3 / +2
Query: 257 RLYHPERLWSLLQPYLLARPVPGNISHHSTVQGNQPPRSVYN 132
R +P L+ ++ R + + +HHS + PRS+++
Sbjct: 128 RCRYPPPSRRCLRTWMRCRSLHQHPTHHSGLSSRYCPRSLHH 253
>C5D05NP.F1 c5d05np.f1
Length = 498
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/15 (46%), Positives = 11/15 (72%)
Frame = -3 / +1
Query: 182 SHHSTVQGNQPPRSV 138
S H + +GN PP+S+
Sbjct: 202 SFHPSPRGNPPPKSL 246
>B7E06NP.R1 b7e06np.r1
Length = 473
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/19 (36%), Positives = 13/19 (67%)
Frame = +2 / -3
Query: 95 RQIENCQPHQSSHCKHFAE 151
R+ ++CQPH+S + A+
Sbjct: 450 RREQHCQPHRSGSSRRPAQ 394
>C5C05NP.R1 c5c05np.r1
Length = 420
Score = 22.1 bits (42), Expect = 7.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 192 WHRSSQ*IWLKKTPKSLRMI 251
W R+SQ WLK + + I
Sbjct: 63 WRRTSQWTWLKVSESCVERI 4
>A2A05NP.F1 a2a05np.f1
Length = 516
Score = 22.1 bits (42), Expect = 7.8
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = +1 / +2
Query: 34 WRFSRPGRTRAEDVRHTVTRS 96
+R S+P R E R VTRS
Sbjct: 50 YRMSKPSNHRRERHRMPVTRS 112
>A5E12NP.F1 a5e12np.f1
Length = 402
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -2 / -2
Query: 63 PGAAWPRESPRLR 25
PG WPR P R
Sbjct: 386 PGGHWPRRRPAWR 348
>A2C03NP.F1 a2c03np.f1
Length = 376
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/15 (46%), Positives = 11/15 (72%)
Frame = -3 / +1
Query: 182 SHHSTVQGNQPPRSV 138
S H + +GN PP+S+
Sbjct: 202 SFHPSPRGNPPPKSL 246
>A6D11NP.F1 a6d11np.f1
Length = 521
Score = 22.1 bits (42), Expect = 7.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3 / -3
Query: 233 WSLLQPYLLARPVPGNISHHS 171
+ L Q L+ P+PGN+S S
Sbjct: 159 FKLNQKELMQ*PIPGNLSSDS 97
>C5H01NP.F1 c5h01np.f1
Length = 476
Score = 22.1 bits (42), Expect = 7.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 242 ERLWSLLQPYL 210
ERLWSLL Y+
Sbjct: 56 ERLWSLLYIYI 24
>B2E08NP.R1 b2e08np.r1
Length = 534
Score = 22.1 bits (42), Expect = 7.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 75 HIFSPGAAWPRESPRL 28
H+F+ A PR+SP L
Sbjct: 8 HLFTDPPAHPRKSPTL 55
>A4F05NP.R1 a4f05np.r1
Length = 238
Score = 22.1 bits (42), Expect = 7.8
Identities = 10/46 (21%), Positives = 19/46 (40%)
Frame = -3 / -2
Query: 341 DISKWPQEEIP*VATRSNCDWRRILGS*RLYHPERLWSLLQPYLLA 204
+ + W ++ + WRR + * + E LW L + + A
Sbjct: 168 ETAAWADDQAGGASAAGRGAWRRRMAL*AMAEVELLWELYRTPMAA 31
>A4C03NP.F1 a4c03np.f1
Length = 371
Score = 22.1 bits (42), Expect = 7.8
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -2 / +2
Query: 423 RISSRHMSSRFKPKFPKQTISSSERHRRYL*VASRRNSLSGNTVEL 286
R+ +RH++ + KQ I + + +AS + +GNT L
Sbjct: 212 RVITRHITQTPLNEINKQNIQADGSDSGIVTLASSGSCSTGNTTSL 349
>A7C12NP.F1 a7c12np.f1
Length = 321
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/15 (46%), Positives = 11/15 (72%)
Frame = -3 / +1
Query: 182 SHHSTVQGNQPPRSV 138
S H + +GN PP+S+
Sbjct: 202 SFHPSPRGNPPPKSL 246
>A9E10NP.F1 a9e10np.f1
Length = 415
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 110 CQPHQSSHCK 139
CQP+Q+SH K
Sbjct: 149 CQPNQNSHHK 178
>A2G02NP.R1 a2g02np.r1
Length = 470
Score = 22.1 bits (42), Expect = 7.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3 / -2
Query: 192 WHRSSQ*IWLKKTPKSLRMI 251
W R+SQ WLK + + I
Sbjct: 70 WRRTSQWTWLKVSESCVERI 11
>B8D08NP.R1 b8d08np.r1
Length = 445
Score = 22.1 bits (42), Expect = 7.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 192 WHRSSQ*IWLKKTPKSLRMI 251
W R+SQ WLK + + I
Sbjct: 82 WRRTSQWTWLKVSESCVERI 23
>A8A05NP.R1 a8a05np.r1
Length = 463
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3 / +1
Query: 191 GNISHHSTVQGNQP 150
G +HHST QP
Sbjct: 55 GKRTHHSTAATFQP 96
>C2F11NP.F1 c2f11np.f1
Length = 482
Score = 22.1 bits (42), Expect = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3 / -1
Query: 339 IACVSPKMKLSV 374
+AC+SP LS
Sbjct: 380 LACLSPSSYLSC 345
>A1F08NP.F1 a1f08np.f1
Length = 581
Score = 22.1 bits (42), Expect = 7.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 110 CQPHQSSHCK 139
CQP+Q+SH K
Sbjct: 356 CQPNQNSHHK 385
>C3F01NP.R1 c3f01np.r1
Length = 466
Score = 22.1 bits (42), Expect = 7.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3 / -2
Query: 69 RCAPYCNSFVRSRTANPIKARIVNTSRRLIALD 167
RCA YC + +A + A + SR L +LD
Sbjct: 402 RCASYCLRCRSTLSAFCLSADLPGPSRILDSLD 304
Database: /phillip/Ncr/np_est
Posted date: Jan 27, 2002 3:48 PM
Number of letters in database: 1,147,514
Number of sequences in database: 2682
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1413444
Number of Sequences: 2682
Number of extensions: 19399
Number of successful extensions: 719
Number of sequences better than 10.0: 65
length of query: 152
length of database: 382,504
effective HSP length: 37
effective length of query: 114
effective length of database: 283,270
effective search space: 32292780
effective search space used: 32292780
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 41 (21.7 bits)