TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrP/stackpack/blast_NcrP/FgrP_1607_D08_H15ZS5.se
q
(246 letters)
Database: /phillip/Ncr/np_est
2682 sequences; 1,147,514 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A6D03NP.R1 a6d03np.r1 28 0.072
C2H11NP.F1 c2h11np.f1 27 0.10
C3F01NP.R1 c3f01np.r1 26 0.26
B2E07NP.R1 b2e07np.r1 25 0.36
B1F11NP.R1 b1f11np.r1 25 0.49
A1G02NP.R1 a1g02np.r1 25 0.49
C3H07NP.R1 c3h07np.r1 25 0.49
A3C02NP.R1 a3c02np.r1 25 0.49
B8B05NP.R1 b8b05np.r1 25 0.49
B4C05NP.R1 b4c05np.r1 24 0.67
A4H06NP.R1 a4h06np.r1 24 0.92
A2G06NP.F1 a2g06np.f1 24 1.3
B2H01NP.F1 b2h01np.f1 24 1.3
B2B12NP.R1 b2b12np.r1 23 2.4
A8D05NP.F1 a8d05np.f1 23 2.4
C2E10NP.R1 c2e10np.r1 23 2.4
A6A04NP.R1 a6a04np.r1 23 2.4
C2A08NP.R1 c2a08np.r1 23 2.4
C3D02NP.F1 c3d02np.f1 22 3.3
C4C11NP.F1 c4c11np.f1 22 3.3
B2A07NP.R1 b2a07np.r1 22 3.3
C1B09NP.F1 c1b09np.f1 22 3.3
C1G11NP.F1 c1g11np.f1 22 4.5
A9C04NP.R1 a9c04np.r1 22 4.5
B8F01NP.R1 b8f01np.r1 22 4.5
A9A11NP.R1 a9a11np.r1 22 4.5
A8D05NP.R1 a8d05np.r1 22 4.5
B7E10NP.R1 b7e10np.r1 22 4.5
A7C03NP.F1 a7c03np.f1 21 6.2
C5F08NP.R1 c5f08np.r1 21 6.2
B1G11NP.R1 b1g11np.r1 21 6.2
C1G05NP.R1 c1g05np.r1 21 6.2
A7C08NP.R1 a7c08np.r1 21 6.2
B3E09NP.F1 b3e09np.f1 21 6.2
C5B09NP.R1 c5b09np.r1 21 6.2
C3H06NP.F1 c3h06np.f1 21 6.2
A3A04NP.F1 a3a04np.f1 21 6.2
B3D05NP.F1 b3d05np.f1 21 6.2
C5B07NP.R1 c5b07np.r1 21 6.2
B1D10NP.F1 b1d10np.f1 21 6.2
B1B08NP.F1 b1b08np.f1 21 6.2
A5H09NP.R1 a5h09np.r1 21 6.2
B5G01NP.R1 b5g01np.r1 21 8.5
A6G06NP.R1 a6g06np.r1 21 8.5
A1A09NP.R1 a1a09np.r1 21 8.5
B7A05NP.F1 b7a05np.f1 21 8.5
B5G10NP.R1 b5g10np.r1 21 8.5
A3G02NP.R1 a3g02np.r1 21 8.5
C2E12NP.R1 c2e12np.r1 21 8.5
A7D12NP.R1 a7d12np.r1 21 8.5
C1A07NP.R1 c1a07np.r1 21 8.5
B1D10NP.R1 b1d10np.r1 21 8.5
A4G06NP.F1 a4g06np.f1 21 8.5
A4D04NP.R1 a4d04np.r1 21 8.5
C5F10NP.F1 c5f10np.f1 21 8.5
A6E01NP.R1 a6e01np.r1 21 8.5
B4E06NP.R1 b4e06np.r1 21 8.5
B4C04NP.F1 b4c04np.f1 21 8.5
B3B07NP.R1 b3b07np.r1 21 8.5
A7D12NP.F1 a7d12np.f1 21 8.5
C3E08NP.R1 c3e08np.r1 21 8.5
B2B09NP.R1 b2b09np.r1 21 8.5
>A6D03NP.R1 a6d03np.r1
Length = 494
Score = 27.6 bits (54), Expect(2) = 0.072
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 111 KGRQGILALLGVDEQDWLDW 170
KGRQ +AL GVDE DW
Sbjct: 330 KGRQTSVALAGVDEAGPHDW 389
Score = 18.0 bits (33), Expect(2) = 0.072
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = +2 / +1
Query: 29 YKRSSSPQHESVTVESLNCLMGHV 100
Y P H + T + +CL +V
Sbjct: 196 YMGHVDPAHPTATGDLESCLQSNV 267
>C2H11NP.F1 c2h11np.f1
Length = 449
Score = 27.2 bits (53), Expect = 0.10
Identities = 10/17 (58%), Positives = 12/17 (69%)
Frame = -1 / +3
Query: 204 TKSQAHPSLIQSSPASP 154
T S HPSLI + P+SP
Sbjct: 354 TNSSIHPSLITNHPSSP 404
>C3F01NP.R1 c3f01np.r1
Length = 466
Score = 25.8 bits (50), Expect = 0.26
Identities = 11/26 (42%), Positives = 13/26 (49%)
Frame = -1 / +3
Query: 198 SQAHPSLIQSSPASPVRQRLAMPKYP 121
++A P SSP SP R P YP
Sbjct: 240 TRASPPSTSSSPPSPPSCRATNPSYP 317
>B2E07NP.R1 b2e07np.r1
Length = 366
Score = 25.3 bits (49), Expect = 0.36
Identities = 15/41 (36%), Positives = 19/41 (45%)
Frame = -1 / +1
Query: 180 LIQSSPASPVRQRLAMPKYPDALLLLST*PMRQFRLSTVTL 58
L S SP R R +P LL + P+R LS+ TL
Sbjct: 205 LTPRSLLSPSRPRPRLPLLLPRRLLFTRTPLRATPLSSATL 327
>B1F11NP.R1 b1f11np.r1
Length = 496
Score = 24.9 bits (48), Expect = 0.49
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1 / +1
Query: 219 ARSVMTKSQAHPSLIQSSPASPVRQRLAMPKYP 121
+RS S PSL SSP++ R +M P
Sbjct: 382 SRSRQMSSSTTPSLFSSSPSALARAAKSMSSAP 480
>A1G02NP.R1 a1g02np.r1
Length = 524
Score = 24.9 bits (48), Expect = 0.49
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1 / +2
Query: 219 ARSVMTKSQAHPSLIQSSPASPVRQRLAMPKYP 121
+RS S PSL SSP++ R +M P
Sbjct: 323 SRSRQMSSSTTPSLFSSSPSALARAAKSMSSAP 421
>C3H07NP.R1 c3h07np.r1
Length = 508
Score = 24.9 bits (48), Expect = 0.49
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1 / +1
Query: 219 ARSVMTKSQAHPSLIQSSPASPVRQRLAMPKYP 121
+RS S PSL SSP++ R +M P
Sbjct: 394 SRSRQMSSSTTPSLFSSSPSALARAAKSMSSAP 492
>A3C02NP.R1 a3c02np.r1
Length = 468
Score = 24.9 bits (48), Expect = 0.49
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1 / +1
Query: 219 ARSVMTKSQAHPSLIQSSPASPVRQRLAMPKYP 121
+RS S PSL SSP++ R +M P
Sbjct: 316 SRSRQMSSSTTPSLFSSSPSALARAAKSMSSAP 414
>B8B05NP.R1 b8b05np.r1
Length = 463
Score = 24.9 bits (48), Expect = 0.49
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1 / +1
Query: 219 ARSVMTKSQAHPSLIQSSPASPVRQRLAMPKYP 121
+RS S PSL SSP++ R +M P
Sbjct: 313 SRSRQMSSSTTPSLFSSSPSALARAAKSMSSAP 411
>B4C05NP.R1 b4c05np.r1
Length = 504
Score = 24.4 bits (47), Expect = 0.67
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / -3
Query: 169 GLD*AWMSLGFCHDGAG 219
GLD* WM++ H G
Sbjct: 460 GLD*LWMAMALVHGAVG 410
>A4H06NP.R1 a4h06np.r1
Length = 553
Score = 24.0 bits (46), Expect = 0.92
Identities = 10/22 (45%), Positives = 13/22 (58%)
Frame = -2 / +1
Query: 230 SDNPPAPS*QNPRLIQA*SSPV 165
S PP+PS* P + SSP+
Sbjct: 34 SSTPPSPS*TGPTRLTQTSSPL 99
>A2G06NP.F1 a2g06np.f1
Length = 284
Score = 23.5 bits (45), Expect = 1.3
Identities = 10/17 (58%), Positives = 12/17 (69%)
Frame = +2 / +1
Query: 68 VESLNCLMGHVERSKRA 118
V+ L+CLMG V S RA
Sbjct: 4 VKKLSCLMGPVSLSGRA 54
>B2H01NP.F1 b2h01np.f1
Length = 368
Score = 23.5 bits (45), Expect = 1.3
Identities = 10/36 (27%), Positives = 18/36 (49%)
Frame = -2 / +2
Query: 173 SPVQPVLFVNA*QCQNTLTPFYFFQHDP*DNSDSQP 66
S QP + ++A +C N + + + P*D +P
Sbjct: 56 STSQPQIQISAYECPNNSSDCQYGHYYP*DRKGKRP 163
>B2B12NP.R1 b2b12np.r1
Length = 534
Score = 22.6 bits (43), Expect = 2.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 26 VYKRSSSPQHES 61
VYKR SS HES
Sbjct: 448 VYKRHSSNHHES 483
>A8D05NP.F1 a8d05np.f1
Length = 380
Score = 22.6 bits (43), Expect = 2.4
Identities = 11/31 (35%), Positives = 15/31 (47%)
Frame = -1 / +2
Query: 222 PARSVMTKSQAHPSLIQSSPASPVRQRLAMP 130
P T + + PSL SPAS + R + P
Sbjct: 224 PTSKPPTSTTSTPSLPSFSPASSLLLRYSFP 316
>C2E10NP.R1 c2e10np.r1
Length = 453
Score = 22.6 bits (43), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1 / +1
Query: 174 QSSPASPVRQRLAMPKYPDALLLLST*PMRQFRL 73
+ S +PV + A+P PD L+ P+R+ L
Sbjct: 190 EPSNPTPVPETPALPPRPDPSTLVFQTPVRRILL 291
>A6A04NP.R1 a6a04np.r1
Length = 522
Score = 22.6 bits (43), Expect = 2.4
Identities = 11/29 (37%), Positives = 14/29 (47%)
Frame = +3 / -1
Query: 6 VHGRARSSTRGAVRRSTRASRLRV*IVSW 92
+HGR R + RGA R +R R W
Sbjct: 474 LHGRGRWTYRGAEWRESRRETGRAFRTLW 388
>C2A08NP.R1 c2a08np.r1
Length = 517
Score = 22.6 bits (43), Expect = 2.4
Identities = 11/29 (37%), Positives = 14/29 (47%)
Frame = +3 / -2
Query: 6 VHGRARSSTRGAVRRSTRASRLRV*IVSW 92
+HGR R + RGA R +R R W
Sbjct: 474 LHGRGRWTYRGAEWRESRRETGRAFRTLW 388
>C3D02NP.F1 c3d02np.f1
Length = 385
Score = 22.1 bits (42), Expect = 3.3
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3 / +2
Query: 211 RHDKIPGSSKPNPVQXXXXXXXXXSNAKI 125
RH K PG S P +Q + +I
Sbjct: 122 RHAKEPGESHPVEIQKAKRTQKKITIPRI 208
>C4C11NP.F1 c4c11np.f1
Length = 405
Score = 22.1 bits (42), Expect = 3.3
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3 / +3
Query: 211 RHDKIPGSSKPNPVQXXXXXXXXXSNAKI 125
RH K PG S P +Q + +I
Sbjct: 156 RHAKEPGESHPVEIQKAKRTQKKITIPRI 242
>B2A07NP.R1 b2a07np.r1
Length = 524
Score = 22.1 bits (42), Expect = 3.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 224 NPPAPS*QNPRLI 186
+P PS* NPRL+
Sbjct: 490 SPRGPS*DNPRLL 452
>C1B09NP.F1 c1b09np.f1
Length = 471
Score = 22.1 bits (42), Expect = 3.3
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3 / +1
Query: 211 RHDKIPGSSKPNPVQXXXXXXXXXSNAKI 125
RH K PG S P +Q + +I
Sbjct: 139 RHAKEPGESHPVEIQKAKRTQKKITIPRI 225
>C1G11NP.F1 c1g11np.f1
Length = 529
Score = 21.7 bits (41), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 18 ARSSTRGAVRRSTRASRLRV 77
AR+STR R++ ASRL V
Sbjct: 209 ARASTRSRRLRTSWASRLPV 268
>A9C04NP.R1 a9c04np.r1
Length = 502
Score = 21.7 bits (41), Expect = 4.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / -1
Query: 150 EQDWLDWTGLGLDEPGILS 206
E+ WLD L LDE LS
Sbjct: 211 ERGWLD*VALLLDEGDALS 155
>B8F01NP.R1 b8f01np.r1
Length = 430
Score = 21.7 bits (41), Expect = 4.5
Identities = 7/23 (30%), Positives = 10/23 (43%)
Frame = +3 / -2
Query: 99 LKEVKGRQGILALLGVDEQDWLD 167
L +G G G Q+WL+
Sbjct: 414 LARARGVNGEDDAKGAKTQEWLE 346
>A9A11NP.R1 a9a11np.r1
Length = 278
Score = 21.7 bits (41), Expect = 4.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +3
Query: 220 RPLRHDKIPGSSK 182
R LRH PGSSK
Sbjct: 189 RSLRHRDPPGSSK 227
>A8D05NP.R1 a8d05np.r1
Length = 432
Score = 21.7 bits (41), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 17 SSLVYKRSSSPQH 55
SSL++KR SP H
Sbjct: 183 SSLLFKRIKSPVH 221
>B7E10NP.R1 b7e10np.r1
Length = 540
Score = 21.7 bits (41), Expect = 4.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2 / -3
Query: 164 GLDWIRLG 187
GLDW+R G
Sbjct: 421 GLDWVRFG 398
>A7C03NP.F1 a7c03np.f1
Length = 374
Score = 21.2 bits (40), Expect = 6.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / +1
Query: 113 FYFFQHDP*DNSDS 72
F+FF +P*D DS
Sbjct: 196 FFFFLSNP*DLQDS 237
>C5F08NP.R1 c5f08np.r1
Length = 320
Score = 21.2 bits (40), Expect = 6.2
Identities = 10/18 (55%), Positives = 11/18 (60%)
Frame = +3 / -3
Query: 12 GRARSSTRGAVRRSTRAS 65
GRARS RR TRA+
Sbjct: 93 GRARSCAGRRPRRRTRAA 40
>B1G11NP.R1 b1g11np.r1
Length = 530
Score = 21.2 bits (40), Expect = 6.2
Identities = 6/14 (42%), Positives = 9/14 (63%)
Frame = -3 / +2
Query: 217 PLRHDKIPGSSKPN 176
P++ +IPGS P
Sbjct: 191 PIQVQQIPGSHGPT 232
>C1G05NP.R1 c1g05np.r1
Length = 437
Score = 21.2 bits (40), Expect = 6.2
Identities = 7/26 (26%), Positives = 15/26 (56%)
Frame = +3 / -2
Query: 108 VKGRQGILALLGVDEQDWLDWTGLGL 185
+KG + +++++ D DW G G+
Sbjct: 340 LKGDRFVVSVVTADVDIGGDWYGKGV 263
>A7C08NP.R1 a7c08np.r1
Length = 488
Score = 21.2 bits (40), Expect = 6.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1 / +3
Query: 204 TKSQAHPSLIQSSPASPVRQRLAMP 130
T HPS SSPA + L+MP
Sbjct: 57 TDKTRHPSSAGSSPAVHSIK*LSMP 131
>B3E09NP.F1 b3e09np.f1
Length = 392
Score = 21.2 bits (40), Expect = 6.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 63 TLSCCGELLLL 31
T+ CGELLL+
Sbjct: 136 TIGLCGELLLM 104
>C5B09NP.R1 c5b09np.r1
Length = 451
Score = 21.2 bits (40), Expect = 6.2
Identities = 10/18 (55%), Positives = 11/18 (60%)
Frame = +3 / -3
Query: 12 GRARSSTRGAVRRSTRAS 65
GRARS RR TRA+
Sbjct: 92 GRARSCAGRRPRRRTRAA 39
>C3H06NP.F1 c3h06np.f1
Length = 452
Score = 21.2 bits (40), Expect = 6.2
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3 / +1
Query: 130 KIP*RPFTSFNMTHET 83
K+P RPF ++ H+T
Sbjct: 280 KLPFRPFDLLSLHHKT 327
>A3A04NP.F1 a3a04np.f1
Length = 452
Score = 21.2 bits (40), Expect = 6.2
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3 / +3
Query: 130 KIP*RPFTSFNMTHET 83
K+P RPF ++ H+T
Sbjct: 279 KLPFRPFDLLSLHHKT 326
>B3D05NP.F1 b3d05np.f1
Length = 506
Score = 21.2 bits (40), Expect = 6.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 63 TLSCCGELLLL 31
T+ CGELLL+
Sbjct: 96 TIGLCGELLLM 64
>C5B07NP.R1 c5b07np.r1
Length = 485
Score = 21.2 bits (40), Expect = 6.2
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 232 SQITRPLRHDK 200
++I RP+RHD+
Sbjct: 92 TEILRPIRHDQ 60
>B1D10NP.F1 b1d10np.f1
Length = 434
Score = 21.2 bits (40), Expect = 6.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3 / +2
Query: 111 KGRQGILALLGVDEQDWLDWTGLGLDE 191
+GR G AL + Q+W + T LD+
Sbjct: 245 RGRGGGDALKKLKRQEWKEATPATLDQ 325
>B1B08NP.F1 b1b08np.f1
Length = 486
Score = 21.2 bits (40), Expect = 6.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 63 TLSCCGELLLL 31
T+ CGELLL+
Sbjct: 253 TIGLCGELLLM 221
>A5H09NP.R1 a5h09np.r1
Length = 471
Score = 21.2 bits (40), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1 / +2
Query: 213 SVMTKSQAHPSLIQSSPASPVRQRLAMP 130
S T S + PSL ++ ASP + L P
Sbjct: 170 SPSTSSPSSPSLDTATLASPTGEPLPPP 253
>B5G01NP.R1 b5g01np.r1
Length = 359
Score = 20.8 bits (39), Expect = 8.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1 / -2
Query: 87 RQFRLSTVTLSCCGELLL 34
R+ R LSCC E LL
Sbjct: 313 RKARRLRAYLSCCSESLL 260
>A6G06NP.R1 a6g06np.r1
Length = 501
Score = 20.8 bits (39), Expect = 8.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2 / +3
Query: 155 LFVNA*QCQNTLTPFYFFQHDP*DNSDSQ 69
LF + QC + P F+ + +S+SQ
Sbjct: 30 LFSDPVQCNRSSVPRALFRDNFRGDSNSQ 116
>A1A09NP.R1 a1a09np.r1
Length = 499
Score = 20.8 bits (39), Expect = 8.5
Identities = 8/23 (34%), Positives = 13/23 (55%)
Frame = -1 / +2
Query: 222 PARSVMTKSQAHPSLIQSSPASP 154
PAR T +A + + +S +SP
Sbjct: 281 PARPTTTTPRASLTSLSTSSSSP 349
>B7A05NP.F1 b7a05np.f1
Length = 383
Score = 20.8 bits (39), Expect = 8.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2 / +3
Query: 239 SYESDNPPAPS*QNPRLIQA 180
S++++NP A +PR QA
Sbjct: 321 SHDTENPSARPLYHPRATQA 380
>B5G10NP.R1 b5g10np.r1
Length = 529
Score = 20.8 bits (39), Expect = 8.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 105 EVKGRQGILALLGV 146
EVKGR+ ++A +G+
Sbjct: 74 EVKGREPVVAHIGL 33
>A3G02NP.R1 a3g02np.r1
Length = 369
Score = 20.8 bits (39), Expect = 8.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / -2
Query: 199 FCHDGAGG 222
+C DGAGG
Sbjct: 365 YCDDGAGG 342
>C2E12NP.R1 c2e12np.r1
Length = 521
Score = 20.8 bits (39), Expect = 8.5
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1 / -1
Query: 163 WTGLD*AWMSLGF 201
W G D WM GF
Sbjct: 44 WNGDDEHWMDRGF 6
>A7D12NP.R1 a7d12np.r1
Length = 466
Score = 20.8 bits (39), Expect = 8.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +1 / +2
Query: 127 FWHC*ALTNRTGWTGLD*AWMSL 195
+W C RTGW + W S+
Sbjct: 383 WWTCLM*PCRTGWGMMPSPWTSV 451
>C1A07NP.R1 c1a07np.r1
Length = 488
Score = 20.8 bits (39), Expect = 8.5
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = +3 / +3
Query: 3 HVHGRARSSTRGAVRRSTR 59
H+H ARSS +G R+ R
Sbjct: 171 HLHRLARSSGQGDSRQVRR 227
>B1D10NP.R1 b1d10np.r1
Length = 427
Score = 20.8 bits (39), Expect = 8.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3 / -2
Query: 111 KGRQGILALLGVDEQDWLDWTGLGLDE 191
+GR G AL + Q+W + T LD+
Sbjct: 336 RGRGGGDALEKLKRQEWKEATPATLDQ 256
>A4G06NP.F1 a4g06np.f1
Length = 409
Score = 20.8 bits (39), Expect = 8.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / -3
Query: 199 FCHDGAGG 222
+C DGAGG
Sbjct: 371 YCDDGAGG 348
>A4D04NP.R1 a4d04np.r1
Length = 445
Score = 20.8 bits (39), Expect = 8.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 105 EVKGRQGILALLGV 146
EVKGR+ ++A +G+
Sbjct: 283 EVKGREPVVAHIGL 242
>C5F10NP.F1 c5f10np.f1
Length = 366
Score = 20.8 bits (39), Expect = 8.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3 / -1
Query: 51 STRASRLRV*IVSWVMLKEVKGRQGI 128
STR R+RV I++ VKG G+
Sbjct: 285 STRIGRIRVEILAGFGSG*VKGLMGV 208
>A6E01NP.R1 a6e01np.r1
Length = 528
Score = 20.8 bits (39), Expect = 8.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1 / -2
Query: 184 WMSLGFCHDG 213
W SLGF DG
Sbjct: 203 WASLGFVWDG 174
>B4E06NP.R1 b4e06np.r1
Length = 538
Score = 20.8 bits (39), Expect = 8.5
Identities = 8/30 (26%), Positives = 10/30 (32%)
Frame = +2 / +3
Query: 38 SSSPQHESVTVESLNCLMGHVERSKRASGY 127
S H L C GH + SG+
Sbjct: 207 SKGEPHPQAPTSKLECQWGHEHQRPGGSGH 296
>B4C04NP.F1 b4c04np.f1
Length = 430
Score = 20.8 bits (39), Expect = 8.5
Identities = 11/40 (27%), Positives = 22/40 (54%)
Frame = +3 / -2
Query: 27 STRGAVRRSTRASRLRV*IVSWVMLKEVKGRQGILALLGV 146
STR + RRS + S++ + V++ ++ + L + GV
Sbjct: 387 STRKSKRRSRKESQMNHGTRAGVLITRIRHIEITLTMAGV 268
>B3B07NP.R1 b3b07np.r1
Length = 558
Score = 20.8 bits (39), Expect = 8.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 105 EVKGRQGILALLGV 146
EVKGR+ ++A +G+
Sbjct: 547 EVKGREPVVAHIGL 506
>A7D12NP.F1 a7d12np.f1
Length = 362
Score = 20.8 bits (39), Expect = 8.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +1 / -3
Query: 127 FWHC*ALTNRTGWTGLD*AWMSL 195
+W C RTGW + W S+
Sbjct: 129 WWTCLM*PCRTGWGMMPSPWTSV 61
>C3E08NP.R1 c3e08np.r1
Length = 517
Score = 20.8 bits (39), Expect = 8.5
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3 / -3
Query: 45 RRSTRASRLRV*IVSWVMLKEVKGRQGILALLGVDEQDWLDWTGL 179
R S R + R + + V+++ +GR G +L VD + G+
Sbjct: 446 RGSRRLEQRRGNVRARVVVERQRGRDGDDTILAVDREVPDQEAGV 312
>B2B09NP.R1 b2b09np.r1
Length = 519
Score = 20.8 bits (39), Expect = 8.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 228 R*PARSVMTKSQAHPSLIQSSPASPVRQRLAMPKY 124
R*PA ++ ++ PSL ++ + P RL Y
Sbjct: 510 R*PA*AMERVAEPRPSLALTTSSPPNWTRLTRASY 406
Database: /phillip/Ncr/np_est
Posted date: Jan 27, 2002 3:48 PM
Number of letters in database: 1,147,514
Number of sequences in database: 2682
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 730861
Number of Sequences: 2682
Number of extensions: 8911
Number of successful extensions: 549
Number of sequences better than 10.0: 67
length of query: 82
length of database: 382,504
effective HSP length: 34
effective length of query: 47
effective length of database: 291,316
effective search space: 13691852
effective search space used: 13691852
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 39 (20.8 bits)