TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrP/stackpack/blast_NcrP/FgrP_1607_G04_N07ZS5.se
q
(331 letters)
Database: /phillip/Ncr/np_est
2682 sequences; 1,147,514 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
C4C09NP.R1 c4c09np.r1 28 0.085
A7F04NP.R1 a7f04np.r1 28 0.12
A9D09NP.R1 a9d09np.r1 27 0.22
A6F10NP.R1 a6f10np.r1 26 0.41
B4F05NP.R1 b4f05np.r1 26 0.41
B7B10NP.R1 b7b10np.r1 26 0.41
B1E07NP.R1 b1e07np.r1 25 0.57
A8E07NP.R1 a8e07np.r1 25 0.78
B1E02NP.F1 b1e02np.f1 24 1.1
B3H01NP.F1 b3h01np.f1 24 1.1
B2D01NP.R1 b2d01np.r1 24 1.1
B2A05NP.R1 b2a05np.r1 24 1.1
B8E12NP.F1 b8e12np.f1 24 1.1
A2F01NP.F1 a2f01np.f1 24 1.1
C1A02NP.F1 c1a02np.f1 24 1.5
B1C01NP.R1 b1c01np.r1 24 1.5
B3G07NP.R1 b3g07np.r1 22 1.5
B6H08NP.R1 b6h08np.r1 24 2.0
C5C07NP.F1 c5c07np.f1 24 2.0
A3B10NP.R1 a3b10np.r1 24 2.0
A1F05NP.F1 a1f05np.f1 23 2.8
A1D12NP.R1 a1d12np.r1 23 2.8
A6B01NP.F1 a6b01np.f1 23 2.8
A4A04NP.R1 a4a04np.r1 23 3.8
C3D12NP.F1 c3d12np.f1 23 3.8
C4C10NP.F1 c4c10np.f1 23 3.8
B8C08NP.R1 b8c08np.r1 23 3.8
B2B06NP.R1 b2b06np.r1 23 3.8
A8G12NP.R1 a8g12np.r1 23 3.8
A8G12NP.F1 a8g12np.f1 23 3.8
A4G05NP.R1 a4g05np.r1 23 3.8
A3D06NP.F1 a3d06np.f1 23 3.8
A1B09NP.R1 a1b09np.r1 23 3.8
B4C11NP.R1 b4c11np.r1 23 3.8
A4E01NP.R1 a4e01np.r1 23 3.8
B2A05NP.F1 b2a05np.f1 23 3.8
C5B12NP.R1 c5b12np.r1 23 3.8
C1E02NP.F1 c1e02np.f1 23 3.8
A5G06NP.R1 a5g06np.r1 23 3.8
A3D06NP.R1 a3d06np.r1 23 3.8
C1G08NP.R1 c1g08np.r1 23 3.8
B8E08NP.F1 b8e08np.f1 23 3.8
B4H10NP.R1 b4h10np.r1 23 3.8
B4E10NP.R1 b4e10np.r1 23 3.8
B4C11NP.F1 b4c11np.f1 23 3.8
B2A11NP.F1 b2a11np.f1 22 4.7
B8F01NP.R1 b8f01np.r1 22 5.3
C3A10NP.R1 c3a10np.r1 22 5.3
A7B10NP.R1 a7b10np.r1 22 5.3
C2B06NP.R1 c2b06np.r1 22 5.3
A1A09NP.R1 a1a09np.r1 22 5.3
A7H08NP.R1 a7h08np.r1 22 5.3
B7C08NP.F1 b7c08np.f1 22 5.3
B4E06NP.F1 b4e06np.f1 22 5.3
A1D12NP.F1 a1d12np.f1 22 5.3
C5E08NP.F1 c5e08np.f1 22 7.2
B2H03NP.R1 b2h03np.r1 22 7.2
B6H10NP.R1 b6h10np.r1 22 7.2
A6D03NP.R1 a6d03np.r1 22 7.2
C5D12NP.F1 c5d12np.f1 22 7.2
C4B10NP.F1 c4b10np.f1 22 7.2
B7F05NP.F1 b7f05np.f1 22 7.2
A6F06NP.R1 a6f06np.r1 22 7.2
B3H05NP.R1 b3h05np.r1 22 7.2
A6H08NP.R1 a6h08np.r1 22 7.2
A5H10NP.R1 a5h10np.r1 22 7.2
A5G09NP.R1 a5g09np.r1 22 7.2
A5E02NP.R1 a5e02np.r1 22 7.2
B1H09NP.F1 b1h09np.f1 22 7.2
B5B04NP.R1 b5b04np.r1 21 9.9
A1B01NP.F1 a1b01np.f1 21 9.9
B2E11NP.F1 b2e11np.f1 21 9.9
A4G09NP.R1 a4g09np.r1 21 9.9
A1A05NP.R1 a1a05np.r1 21 9.9
C5H09NP.F1 c5h09np.f1 21 9.9
B5G02NP.R1 b5g02np.r1 21 9.9
B5D07NP.R1 b5d07np.r1 21 9.9
A8D09NP.F1 a8d09np.f1 21 9.9
C2E10NP.F1 c2e10np.f1 21 9.9
A6A05NP.R1 a6a05np.r1 21 9.9
C1B02NP.F1 c1b02np.f1 21 9.9
B5A09NP.R1 b5a09np.r1 21 9.9
A6G02NP.F1 a6g02np.f1 21 9.9
A1C05NP.F1 a1c05np.f1 21 9.9
C4B11NP.R1 c4b11np.r1 21 9.9
B8B10NP.F1 b8b10np.f1 21 9.9
A3A07NP.F1 a3a07np.f1 21 9.9
B3D03NP.R1 b3d03np.r1 21 9.9
B1B04NP.F1 b1b04np.f1 21 9.9
A6C03NP.F1 a6c03np.f1 21 9.9
A1F12NP.R1 a1f12np.r1 21 9.9
C1F02NP.R1 c1f02np.r1 21 9.9
C5A03NP.R1 c5a03np.r1 21 9.9
A5C04NP.R1 a5c04np.r1 21 9.9
C5H08NP.F1 c5h08np.f1 21 9.9
C3F12NP.F1 c3f12np.f1 21 9.9
C2B12NP.R1 c2b12np.r1 21 9.9
B7D11NP.R1 b7d11np.r1 21 9.9
A2B08NP.F1 a2b08np.f1 21 9.9
C1F12NP.F1 c1f12np.f1 21 9.9
A5C12NP.R1 a5c12np.r1 21 9.9
>C4C09NP.R1 c4c09np.r1
Length = 338
Score = 28.1 bits (55), Expect = 0.085
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1 / -1
Query: 76 RPSK*KWLQLLRMVACLHLADHLDIRLSRKGM 171
RPS+*KWL++L VA + L+I +++ +
Sbjct: 119 RPSR*KWLRILTKVAVIKETAILNITSAKEAI 24
>A7F04NP.R1 a7f04np.r1
Length = 496
Score = 27.6 bits (54), Expect = 0.12
Identities = 12/34 (35%), Positives = 13/34 (37%)
Frame = +1 / +3
Query: 139 HLDIRLSRKGMPQAGGGFCNSSGEPPKAHGAGHW 240
HL S G P C S PP AGH+
Sbjct: 375 HLSEPTSPYGSPSPSNAMCTSPLPPPATPAAGHF 476
>A9D09NP.R1 a9d09np.r1
Length = 430
Score = 26.7 bits (52), Expect = 0.22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1 / -2
Query: 193 CNSSGEPPKAHGAGHW*HRA 252
C SS PK+ +G W*H A
Sbjct: 189 CGSSAACPKSSWSGRW*HGA 130
>A6F10NP.R1 a6f10np.r1
Length = 473
Score = 25.8 bits (50), Expect = 0.41
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1 / -3
Query: 94 WLQLLRMVACLHLADHLDIRLSRKGMPQAGGGFCNSSGEPPK 219
WL LL ++ H A + R S KG+ GG G K
Sbjct: 462 WLLLLLLLLGRHRAPYTLSRTSSKGLGTREGGNAGGXGRIAK 337
>B4F05NP.R1 b4f05np.r1
Length = 565
Score = 25.8 bits (50), Expect = 0.41
Identities = 11/36 (30%), Positives = 16/36 (43%)
Frame = +1 / +3
Query: 169 MPQAGGGFCNSSGEPPKAHGAGHW*HRALLGSHSDP 276
+ Q G + +G PP G H+A G+H P
Sbjct: 231 LTQQGADSTSQAGHPPPGPGDT*TIHKATTGNHHPP 338
>B7B10NP.R1 b7b10np.r1
Length = 525
Score = 25.8 bits (50), Expect = 0.41
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / +2
Query: 189 PPPCLRHSLS 160
PPPCL H+LS
Sbjct: 5 PPPCLSHTLS 34
>B1E07NP.R1 b1e07np.r1
Length = 457
Score = 25.3 bits (49), Expect = 0.57
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1 / -3
Query: 172 PQAGGGFCNSSGEPPKAHG 228
P G FCN+ P K HG
Sbjct: 89 PNLGKTFCNADQCPQKVHG 33
>A8E07NP.R1 a8e07np.r1
Length = 405
Score = 24.9 bits (48), Expect = 0.78
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 65 RHEAYCRRYWAGRCY 21
R++ RR W GRCY
Sbjct: 231 RNQHLPRRSWCGRCY 187
>B1E02NP.F1 b1e02np.f1
Length = 477
Score = 24.4 bits (47), Expect = 1.1
Identities = 14/26 (53%), Positives = 15/26 (56%)
Frame = +1 / -1
Query: 253 LLGSHSDPSSQTLRTPGMHLKATGVL 330
LL S PSSQTLRT AT +L
Sbjct: 438 LLASLPKPSSQTLRTS*SSGSATTLL 361
>B3H01NP.F1 b3h01np.f1
Length = 544
Score = 24.4 bits (47), Expect = 1.1
Identities = 14/26 (53%), Positives = 15/26 (56%)
Frame = +1 / -1
Query: 253 LLGSHSDPSSQTLRTPGMHLKATGVL 330
LL S PSSQTLRT AT +L
Sbjct: 436 LLASLPKPSSQTLRTS*SSGSATTLL 359
>B2D01NP.R1 b2d01np.r1
Length = 497
Score = 24.4 bits (47), Expect = 1.1
Identities = 14/26 (53%), Positives = 15/26 (56%)
Frame = +1 / +1
Query: 253 LLGSHSDPSSQTLRTPGMHLKATGVL 330
LL S PSSQTLRT AT +L
Sbjct: 406 LLASLPKPSSQTLRTS*SSGSATTLL 483
>B2A05NP.R1 b2a05np.r1
Length = 529
Score = 24.4 bits (47), Expect = 1.1
Identities = 14/26 (53%), Positives = 15/26 (56%)
Frame = +1 / +2
Query: 253 LLGSHSDPSSQTLRTPGMHLKATGVL 330
LL S PSSQTLRT AT +L
Sbjct: 452 LLASLPKPSSQTLRTS*SSGSATTLL 529
>B8E12NP.F1 b8e12np.f1
Length = 272
Score = 24.4 bits (47), Expect = 1.1
Identities = 14/26 (53%), Positives = 15/26 (56%)
Frame = +1 / -2
Query: 253 LLGSHSDPSSQTLRTPGMHLKATGVL 330
LL S PSSQTLRT AT +L
Sbjct: 94 LLASLPKPSSQTLRTS*SSGSATTLL 17
>A2F01NP.F1 a2f01np.f1
Length = 461
Score = 24.4 bits (47), Expect = 1.1
Identities = 14/26 (53%), Positives = 15/26 (56%)
Frame = +1 / -3
Query: 253 LLGSHSDPSSQTLRTPGMHLKATGVL 330
LL S PSSQTLRT AT +L
Sbjct: 438 LLASLPKPSSQTLRTS*SSGSATTLL 361
>C1A02NP.F1 c1a02np.f1
Length = 444
Score = 24.0 bits (46), Expect = 1.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / -2
Query: 253 LLGSHSDPSSQTLRT 297
LL S PSSQTLRT
Sbjct: 437 LLASLPKPSSQTLRT 393
>B1C01NP.R1 b1c01np.r1
Length = 506
Score = 24.0 bits (46), Expect = 1.5
Identities = 11/24 (45%), Positives = 12/24 (49%)
Frame = -2 / +3
Query: 234 TSAMRFWRFSGRITKPPPCLRHSL 163
TS+ F R PPPC R SL
Sbjct: 153 TSSSSFPRAPRSSFSPPPCPRTSL 224
>B3G07NP.R1 b3g07np.r1
Length = 564
Score = 21.7 bits (41), Expect(2) = 1.5
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -3 / +3
Query: 257 NRARCYQ*PAPCAFGGSPEELQNP 186
NR +Q P P P LQ P
Sbjct: 6 NRLAHHQRPLPTYLPPPPSILQQP 77
Score = 20.8 bits (39), Expect(2) = 1.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2 / +3
Query: 195 TKPPPCLRHS 166
TKP PCL +S
Sbjct: 264 TKPTPCLLNS 293
>B6H08NP.R1 b6h08np.r1
Length = 581
Score = 23.5 bits (45), Expect = 2.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / +2
Query: 130 LADHLDIRLSRKGMPQAGGGFCNSSG 207
L D D RL+ P+A FC+ +G
Sbjct: 293 LRDENDNRLTLVSEPEAAALFCSKTG 370
>C5C07NP.F1 c5c07np.f1
Length = 503
Score = 23.5 bits (45), Expect = 2.0
Identities = 8/18 (44%), Positives = 9/18 (49%)
Frame = -3 / -3
Query: 233 PAPCAFGGSPEELQNPPP 180
P P G P + Q PPP
Sbjct: 303 PLPSQSGPPPPQYQGPPP 250
>A3B10NP.R1 a3b10np.r1
Length = 541
Score = 23.5 bits (45), Expect = 2.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3 / -2
Query: 227 PCAFGGSPEELQNPPPA 177
PCA G P+ PPP+
Sbjct: 201 PCAQDGPPQRA*PPPPS 151
>A1F05NP.F1 a1f05np.f1
Length = 520
Score = 23.1 bits (44), Expect = 2.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1 / +2
Query: 148 CQGDPPDEDKRP 113
C GDPP RP
Sbjct: 98 CSGDPPTRGARP 133
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 195 TKPPPCLRHSLS 160
++PPPC S+S
Sbjct: 463 SQPPPCPSKSIS 428
>A1D12NP.R1 a1d12np.r1
Length = 531
Score = 23.1 bits (44), Expect = 2.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1 / -2
Query: 166 GMPQAGGGFCNSSGEPPKAHGAG 234
G PQ C S G + HG+G
Sbjct: 338 GWPQRSECGCKSGGNVWRTHGSG 270
>A6B01NP.F1 a6b01np.f1
Length = 382
Score = 23.1 bits (44), Expect = 2.8
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = +1 / -1
Query: 244 HRALLGSHS 270
HR+LLGSHS
Sbjct: 151 HRSLLGSHS 125
>A4A04NP.R1 a4a04np.r1
Length = 449
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +2
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 389 RYPHHCRRY 415
>C3D12NP.F1 c3d12np.f1
Length = 307
Score = 22.6 bits (43), Expect = 3.8
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = +1 / +3
Query: 157 SRKGMPQAGGGFCNSSGEPPKAH 225
S+KG + GGG P KAH
Sbjct: 228 SKKGRKEKGGGNQAPYPSPGKAH 296
>C4C10NP.F1 c4c10np.f1
Length = 480
Score = 22.6 bits (43), Expect = 3.8
Identities = 11/30 (36%), Positives = 13/30 (42%)
Frame = -1 / -3
Query: 265 GCLTGHDVTNDQRHALLEVLRKNYKTPPLL 176
GCL T RH LL + K K P +
Sbjct: 421 GCLNNRHKTAWARHVLLSLHEKE*KGRPAI 332
>B8C08NP.R1 b8c08np.r1
Length = 484
Score = 22.6 bits (43), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (40%)
Frame = +1 / -3
Query: 103 LLRMVACLHLADHLDIRLSRKGMPQAGGGFCNSSGEPPKAH 225
+LR HLA R S G+P A G + P K +
Sbjct: 266 MLRSHRGAHLAVARATRSSAPGIPMASGASVPTPAAPKKMY 144
>B2B06NP.R1 b2b06np.r1
Length = 522
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 397 RYPHHCRRY 423
>A8G12NP.R1 a8g12np.r1
Length = 451
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 400 RYPHHCRRY 426
>A8G12NP.F1 a8g12np.f1
Length = 581
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / -3
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 345 RYPHHCRRY 319
>A4G05NP.R1 a4g05np.r1
Length = 495
Score = 22.6 bits (43), Expect = 3.8
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +3 / -3
Query: 204 RRTSKSAWRW 233
RR KS W W
Sbjct: 367 RRNQKSPWTW 338
>A3D06NP.F1 a3d06np.f1
Length = 494
Score = 22.6 bits (43), Expect = 3.8
Identities = 11/30 (36%), Positives = 13/30 (42%)
Frame = -1 / -1
Query: 265 GCLTGHDVTNDQRHALLEVLRKNYKTPPLL 176
GCL T RH LL + K K P +
Sbjct: 437 GCLNNRHKTAWARHVLLSLHEKE*KGRPAI 348
>A1B09NP.R1 a1b09np.r1
Length = 512
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +3
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 393 RYPHHCRRY 419
>B4C11NP.R1 b4c11np.r1
Length = 387
Score = 22.6 bits (43), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (40%)
Frame = +1 / -3
Query: 103 LLRMVACLHLADHLDIRLSRKGMPQAGGGFCNSSGEPPKAH 225
+LR HLA R S G+P A G + P K +
Sbjct: 319 MLRSHRGAHLAVARATRSSAPGIPMASGASVPTPAAPKKMY 197
>A4E01NP.R1 a4e01np.r1
Length = 490
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 388 RYPHHCRRY 414
>B2A05NP.F1 b2a05np.f1
Length = 436
Score = 22.6 bits (43), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1 / -3
Query: 256 LGSHSDPSSQTLRTPGMHLKATGVL 330
L S PSSQTLRT AT +L
Sbjct: 434 LASLPKPSSQTLRTS*SSGSATTLL 360
>C5B12NP.R1 c5b12np.r1
Length = 462
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +3
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 147 RYPHHCRRY 173
>C1E02NP.F1 c1e02np.f1
Length = 349
Score = 22.6 bits (43), Expect = 3.8
Identities = 7/12 (58%), Positives = 9/12 (74%)
Frame = -3 / -1
Query: 227 PCAFGGSPEELQ 192
PC GG PE++Q
Sbjct: 58 PCGGGGYPEQVQ 23
Score = 22.1 bits (42), Expect = 5.3
Identities = 6/11 (54%), Positives = 6/11 (54%)
Frame = +1 / +3
Query: 193 CNSSGEPPKAH 225
C SG PP H
Sbjct: 24 CTCSGYPPPPH 56
>A5G06NP.R1 a5g06np.r1
Length = 466
Score = 22.6 bits (43), Expect = 3.8
Identities = 12/41 (29%), Positives = 15/41 (36%)
Frame = +1 / +2
Query: 154 LSRKGMPQAGGGFCNSSGEPPKAHGAGHW*HRALLGSHSDP 276
LS K PQ G PP G +LL + +P
Sbjct: 260 LSFKSQPQWGTLLTQKHQHPPSTPGQAEQTPLSLLAAKPEP 382
>A3D06NP.R1 a3d06np.r1
Length = 468
Score = 22.6 bits (43), Expect = 3.8
Identities = 11/30 (36%), Positives = 13/30 (42%)
Frame = -1 / +2
Query: 265 GCLTGHDVTNDQRHALLEVLRKNYKTPPLL 176
GCL T RH LL + K K P +
Sbjct: 332 GCLNNRHKTAWARHVLLSLHEKE*KGRPAI 421
>C1G08NP.R1 c1g08np.r1
Length = 523
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +3
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 408 RYPHHCRRY 434
>B8E08NP.F1 b8e08np.f1
Length = 487
Score = 22.6 bits (43), Expect = 3.8
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = -1 / -3
Query: 319 SPSDASLEFEEFDYWDRCG 263
SP+DA +E + WDR G
Sbjct: 482 SPADADIEILDPVDWDRNG 426
>B4H10NP.R1 b4h10np.r1
Length = 555
Score = 22.6 bits (43), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (40%)
Frame = +1 / -1
Query: 103 LLRMVACLHLADHLDIRLSRKGMPQAGGGFCNSSGEPPKAH 225
+LR HLA R S G+P A G + P K +
Sbjct: 270 MLRSHRGAHLAVARATRSSAPGIPMASGASVPTPAAPKKMY 148
>B4E10NP.R1 b4e10np.r1
Length = 577
Score = 22.6 bits (43), Expect = 3.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / +1
Query: 65 RHEAYCRRY 39
R+ +CRRY
Sbjct: 400 RYPHHCRRY 426
>B4C11NP.F1 b4c11np.f1
Length = 393
Score = 22.6 bits (43), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (40%)
Frame = +1 / +1
Query: 103 LLRMVACLHLADHLDIRLSRKGMPQAGGGFCNSSGEPPKAH 225
+LR HLA R S G+P A G + P K +
Sbjct: 94 MLRSHRGAHLAVARATRSSAPGIPMASGASVPTPAAPKKMY 216
>B2A11NP.F1 b2a11np.f1
Length = 126
Score = 21.7 bits (41), Expect(2) = 4.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1 / +1
Query: 187 PPLLEAFPFLIIGCQGDPPDEDK 119
PP AFP L +PP++ K
Sbjct: 55 PPYCTAFPRLFACNTPNPPEKKK 123
Score = 16.6 bits (30), Expect(2) = 4.7
Identities = 4/5 (80%), Positives = 4/5 (80%)
Frame = -2 / +1
Query: 195 TKPPP 181
TKPP
Sbjct: 49 TKPPY 63
>B8F01NP.R1 b8f01np.r1
Length = 430
Score = 22.1 bits (42), Expect = 5.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1 / +1
Query: 94 ISIWRDARNSDMKHIVGDIGQ 32
I++W N+ + H +GD+ Q
Sbjct: 142 ITLWLSQLNTSLLHNLGDLFQ 204
>C3A10NP.R1 c3a10np.r1
Length = 471
Score = 22.1 bits (42), Expect = 5.3
Identities = 7/18 (38%), Positives = 13/18 (71%)
Frame = -3 / +3
Query: 86 LEGR*KFRHEAYCRRYWA 33
LEG+ ++HE + R+W+
Sbjct: 333 LEGQQIWQHERHQERFWS 386
>A7B10NP.R1 a7b10np.r1
Length = 513
Score = 22.1 bits (42), Expect = 5.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / +3
Query: 300 WSSKSLTTGIAVAA 259
W+S TTG A AA
Sbjct: 468 WTSSGSTTGFATAA 509
>C2B06NP.R1 c2b06np.r1
Length = 476
Score = 22.1 bits (42), Expect = 5.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 139 HLDIRLSRKGMPQ 177
HLD LSR G+P+
Sbjct: 321 HLDELLSRHGLPE 283
>A1A09NP.R1 a1a09np.r1
Length = 499
Score = 22.1 bits (42), Expect = 5.3
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +3 / -3
Query: 225 WRWSLVTS 248
W WSL T+
Sbjct: 416 WAWSLSTT 393
>A7H08NP.R1 a7h08np.r1
Length = 422
Score = 22.1 bits (42), Expect = 5.3
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 212 GSPEELQNPPPA 177
G+P+E ++PPP+
Sbjct: 186 GTPKEPESPPPS 151
>B7C08NP.F1 b7c08np.f1
Length = 437
Score = 22.1 bits (42), Expect = 5.3
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3 / -2
Query: 198 FFRRTSKSAWRWSLVTS 248
F R AWR +VT+
Sbjct: 181 FIRFAGLRAWRRMIVTA 131
>B4E06NP.F1 b4e06np.f1
Length = 321
Score = 22.1 bits (42), Expect = 5.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3 / +3
Query: 227 PCAFGGSPEELQNPPPA*GIPF 162
PC G + E L+ P P G PF
Sbjct: 240 PCWSGPNCEGLKQPFPRGGQPF 305
Score = 21.7 bits (41), Expect = 7.2
Identities = 8/26 (30%), Positives = 12/26 (45%)
Frame = +1 / -3
Query: 148 IRLSRKGMPQAGGGFCNSSGEPPKAH 225
++ +KG P G G + S P H
Sbjct: 319 LQKKKKGCPPRGKGCLSPSQFGPDQH 242
>A1D12NP.F1 a1d12np.f1
Length = 524
Score = 22.1 bits (42), Expect = 5.3
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = -1 / +3
Query: 310 DASLEFEEFDYWDRCGCLTGHDVTNDQRHALLEVLRKNYKTPP 182
+ +L+ YW + TN +RHA +L+++ + P
Sbjct: 375 EEALKAGTLQYWRGLAIQNAKNSTNAKRHAKGGMLQQSKQATP 503
>C5E08NP.F1 c5e08np.f1
Length = 522
Score = 21.7 bits (41), Expect = 7.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1 / +3
Query: 187 PPLLEAFPFLIIGCQGDPPDEDK 119
PP AFP L +PP++ K
Sbjct: 180 PPYCTAFPRLFACNTPNPPEKKK 248
>B2H03NP.R1 b2h03np.r1
Length = 522
Score = 21.7 bits (41), Expect = 7.2
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = -1 / +3
Query: 322 LSPSDASLEFEEFDYWDRCGCLTGHDVTNDQRH 224
+ P +S+ +FD D LTG + + H
Sbjct: 222 MKPPPSSIGHSDFDRRDIASVLTGKSSSINHHH 320
>B6H10NP.R1 b6h10np.r1
Length = 432
Score = 21.7 bits (41), Expect = 7.2
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +3 / +1
Query: 204 RRTSKSAWR 230
RRTS + W+
Sbjct: 337 RRTSMAYWK 363
>A6D03NP.R1 a6d03np.r1
Length = 494
Score = 21.7 bits (41), Expect = 7.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 232 GHW*HRALLGSHSDP 276
G W* RAL GS +P
Sbjct: 282 GSW*IRALHGSSPEP 326
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3 / +2
Query: 228 RWSLVTSCPVR 260
RW LV CP R
Sbjct: 278 RWLLVNPCPSR 310
>C5D12NP.F1 c5d12np.f1
Length = 458
Score = 21.7 bits (41), Expect = 7.2
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -1 / +2
Query: 283 DYWDRCGCLTGHD 245
D+W RC C D
Sbjct: 410 DWWPRCDCCGDDD 448
>C4B10NP.F1 c4b10np.f1
Length = 395
Score = 21.7 bits (41), Expect = 7.2
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -1 / -3
Query: 295 FEEFDYWDRCGCLTGHDVTN 236
F+ +DYW R L G N
Sbjct: 195 FQVYDYWMRSPNLQGGGTVN 136
>B7F05NP.F1 b7f05np.f1
Length = 371
Score = 21.7 bits (41), Expect = 7.2
Identities = 6/16 (37%), Positives = 8/16 (49%)
Frame = +1 / +1
Query: 193 CNSSGEPPKAHGAGHW 240
C + PP G+G W
Sbjct: 232 CVAPSHPPSCSGSGPW 279
>A6F06NP.R1 a6f06np.r1
Length = 560
Score = 21.7 bits (41), Expect = 7.2
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -3 / -2
Query: 44 RYWAGRCY 21
R W GRCY
Sbjct: 559 RSWCGRCY 536
>B3H05NP.R1 b3h05np.r1
Length = 562
Score = 21.7 bits (41), Expect = 7.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 176 KQGGGFVILPENL 214
++GGGF +LP L
Sbjct: 182 REGGGFQVLPSIL 220
>A6H08NP.R1 a6h08np.r1
Length = 548
Score = 21.7 bits (41), Expect = 7.2
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / +1
Query: 206 PEELQNPPP 180
PE++Q PPP
Sbjct: 406 PEQVQEPPP 432
>A5H10NP.R1 a5h10np.r1
Length = 488
Score = 21.7 bits (41), Expect = 7.2
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 265 HSDPSSQTLRT 297
HS+ SSQT+RT
Sbjct: 455 HSNSSSQTVRT 487
>A5G09NP.R1 a5g09np.r1
Length = 384
Score = 21.7 bits (41), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1 / -2
Query: 259 GSHSDPSSQTLRTPGMHL 312
GS S Q LRTPG L
Sbjct: 275 GSKSFQE*QALRTPGFRL 222
>A5E02NP.R1 a5e02np.r1
Length = 446
Score = 21.7 bits (41), Expect = 7.2
Identities = 7/15 (46%), Positives = 9/15 (59%)
Frame = -2 / -2
Query: 330 QYTCRLQMHPWSSKS 286
Q + R Q HPW +S
Sbjct: 376 QLSGRRQQHPWRHRS 332
>B1H09NP.F1 b1h09np.f1
Length = 406
Score = 21.7 bits (41), Expect = 7.2
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -1 / +2
Query: 283 DYWDRCGCLTGHD 245
D+W RC C D
Sbjct: 311 DWWPRCDCCGDDD 349
>B5B04NP.R1 b5b04np.r1
Length = 480
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1 / -3
Query: 205 GEPPKAHGAGHW 240
G P +HG GH+
Sbjct: 136 GSPHASHGGGHF 101
>A1B01NP.F1 a1b01np.f1
Length = 480
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 244 HRALLGSHS 270
HR+ LGSHS
Sbjct: 222 HRSFLGSHS 196
>B2E11NP.F1 b2e11np.f1
Length = 507
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2 / -3
Query: 216 WRFSGRITKPPP 181
W S R T+PP
Sbjct: 334 WPPSARPTRPPS 299
>A4G09NP.R1 a4g09np.r1
Length = 465
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3 / +1
Query: 198 FFRRTSKSAWRWSLVTSCPVR 260
F ++ S+ ++L+ +CPVR
Sbjct: 52 FTANSTISSNSFALLVACPVR 114
>A1A05NP.R1 a1a05np.r1
Length = 551
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3 / -1
Query: 266 WLPNRARCYQ*PAP 225
WLP R RC P
Sbjct: 332 WLP*RFRCCGSLCP 291
>C5H09NP.F1 c5h09np.f1
Length = 558
Score = 21.2 bits (40), Expect = 9.9
Identities = 4/5 (80%), Positives = 4/5 (80%)
Frame = -1 / -1
Query: 277 WDRCG 263
W RCG
Sbjct: 150 WSRCG 136
>B5G02NP.R1 b5g02np.r1
Length = 486
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / +1
Query: 195 TKPPPCLRHSL 163
T+PPP L SL
Sbjct: 58 TRPPPTLHRSL 90
>B5D07NP.R1 b5d07np.r1
Length = 556
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 244 HRALLGSHS 270
HR+ LGSHS
Sbjct: 524 HRSFLGSHS 550
>A8D09NP.F1 a8d09np.f1
Length = 451
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 244 HRALLGSHS 270
HR+ LGSHS
Sbjct: 219 HRSFLGSHS 193
>C2E10NP.F1 c2e10np.f1
Length = 450
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/18 (38%), Positives = 13/18 (71%)
Frame = +1 / +3
Query: 25 HRPAQYLRQYASCRNF*R 78
+RP+Q ++ASC ++ R
Sbjct: 138 NRPSQSADEHASCHHYHR 191
>A6A05NP.R1 a6a05np.r1
Length = 469
Score = 21.2 bits (40), Expect = 9.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2 / +1
Query: 303 PWSSKSLTTGIAVAA*QGTMLP 238
P SS TTG+ G+++P
Sbjct: 373 PVSSVMTTTGVRSVPDYGSVMP 438
>C1B02NP.F1 c1b02np.f1
Length = 297
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = -1 / -1
Query: 286 FDYWDRCGCLTG 251
F Y RC C T
Sbjct: 78 FGYHYRCPCYTA 43
>B5A09NP.R1 b5a09np.r1
Length = 290
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -1 / +2
Query: 151 GCQGDPPDEDKR 116
GC+G P+E +R
Sbjct: 218 GCKGGMPEEQRR 253
>A6G02NP.F1 a6g02np.f1
Length = 287
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 44 SDNMLHVGISSVP 82
S+ +LH+G+S P
Sbjct: 192 SEGILHIGVSGSP 230
>A1C05NP.F1 a1c05np.f1
Length = 416
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 244 HRALLGSHS 270
HR+ LGSHS
Sbjct: 226 HRSFLGSHS 200
>C4B11NP.R1 c4b11np.r1
Length = 433
Score = 21.2 bits (40), Expect = 9.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 144 *HPIIKKGNASSRGGV 191
*+ +I+ GN+ SRG V
Sbjct: 110 *YTLIRMGNSCSRGAV 63
>B8B10NP.F1 b8b10np.f1
Length = 327
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 244 HRALLGSHS 270
HR+ LGSHS
Sbjct: 215 HRSFLGSHS 189
>A3A07NP.F1 a3a07np.f1
Length = 472
Score = 21.2 bits (40), Expect = 9.9
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 71 SSVPPNRNGSS 103
SSVPP++ GSS
Sbjct: 211 SSVPPSKCGSS 243
>B3D03NP.R1 b3d03np.r1
Length = 547
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -2 / +3
Query: 201 RITKPPPCLR 172
R P PCLR
Sbjct: 30 RFRGPVPCLR 59
>B1B04NP.F1 b1b04np.f1
Length = 358
Score = 21.2 bits (40), Expect = 9.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / +3
Query: 157 SRKGMPQAGGGFCNSSGEPPKAH 225
S+KG + GGG P K+H
Sbjct: 228 SKKGRKEKGGGNQAPYPSPGKSH 296
>A6C03NP.F1 a6c03np.f1
Length = 235
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 44 SDNMLHVGISSVP 82
S+ +LH+G+S P
Sbjct: 189 SEGILHIGVSGSP 227
>A1F12NP.R1 a1f12np.r1
Length = 566
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3 / -2
Query: 204 RRTSKSAWRWSL 239
+ T SAWRW +
Sbjct: 496 KTTPLSAWRWEI 461
>C1F02NP.R1 c1f02np.r1
Length = 501
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/9 (77%), Positives = 9/9 (99%)
Frame = -2 / -1
Query: 93 FLFGGTLEI 67
F+FGGTL+I
Sbjct: 333 FVFGGTLDI 307
>C5A03NP.R1 c5a03np.r1
Length = 384
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = +2 / -3
Query: 122 VFIWRITLTSDYQERECLKQGGGF 193
+ +W + L E QGGG+
Sbjct: 283 LLVWEVPLWGGVMEHSTGTQGGGW 212
>A5C04NP.R1 a5c04np.r1
Length = 488
Score = 21.2 bits (40), Expect = 9.9
Identities = 8/18 (44%), Positives = 9/18 (49%)
Frame = -2 / -3
Query: 240 PMTSAMRFWRFSGRITKP 187
P TS R W F G + P
Sbjct: 282 PHTSQCRMWCFWGDLKNP 229
>C5H08NP.F1 c5h08np.f1
Length = 349
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 244 HRALLGSHS 270
HR+ LGSHS
Sbjct: 217 HRSFLGSHS 191
>C3F12NP.F1 c3f12np.f1
Length = 240
Score = 21.2 bits (40), Expect = 9.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1 / -2
Query: 220 AHGAGHW*HRALLGSHS 270
A G +W H L G+HS
Sbjct: 116 AAGCHNWPHGGLEGNHS 66
>C2B12NP.R1 c2b12np.r1
Length = 509
Score = 21.2 bits (40), Expect = 9.9
Identities = 8/18 (44%), Positives = 9/18 (49%)
Frame = -1 / -2
Query: 106 VAGAISIWRDARNSDMKH 53
V G + W D RN KH
Sbjct: 304 VEGDLMGWLDRRNIGSKH 251
>B7D11NP.R1 b7d11np.r1
Length = 349
Score = 21.2 bits (40), Expect = 9.9
Identities = 7/22 (31%), Positives = 11/22 (49%)
Frame = +2 / +3
Query: 176 KQGGGFVILPENLQKRMALVIG 241
+ GGG V+ P N + +G
Sbjct: 204 RSGGGSVMNPSNYDRERGYYVG 269
>A2B08NP.F1 a2b08np.f1
Length = 351
Score = 21.2 bits (40), Expect = 9.9
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 324 TCRLQMHPW 298
TCR+ +HP+
Sbjct: 291 TCRISLHPY 317
>C1F12NP.F1 c1f12np.f1
Length = 577
Score = 21.2 bits (40), Expect = 9.9
Identities = 8/18 (44%), Positives = 9/18 (49%)
Frame = -1 / +1
Query: 106 VAGAISIWRDARNSDMKH 53
V G + W D RN KH
Sbjct: 307 VEGDLMGWLDRRNIGSKH 360
>A5C12NP.R1 a5c12np.r1
Length = 526
Score = 21.2 bits (40), Expect = 9.9
Identities = 6/16 (37%), Positives = 9/16 (55%)
Frame = -2 / +3
Query: 222 RFWRFSGRITKPPPCL 175
R+WR +P PC+
Sbjct: 336 RWWRA*SSTNRPAPCI 383
Database: /phillip/Ncr/np_est
Posted date: Jan 27, 2002 3:48 PM
Number of letters in database: 1,147,514
Number of sequences in database: 2682
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1183236
Number of Sequences: 2682
Number of extensions: 18199
Number of successful extensions: 749
Number of sequences better than 10.0: 110
length of query: 110
length of database: 382,504
effective HSP length: 34
effective length of query: 75
effective length of database: 291,316
effective search space: 21848700
effective search space used: 21848700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 40 (21.2 bits)