TBLASTX 2.1.3 [Apr-1-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
/phillip/projects/Xu/FgrP/stackpack/blast_NcrP/FgrP_1608_A11_B22ZS5.se
q
(418 letters)
Database: /phillip/Ncr/np_est
2682 sequences; 1,147,514 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B8D11NP.F1 b8d11np.f1 29 0.081
C1G07NP.R1 c1g07np.r1 27 0.29
B1C11NP.R1 b1c11np.r1 26 0.39
C3A07NP.R1 c3a07np.r1 26 0.54
B3G04NP.R1 b3g04np.r1 25 0.75
A6G03NP.R1 a6g03np.r1 25 0.75
B7D05NP.R1 b7d05np.r1 25 1.0
A5B08NP.F1 a5b08np.f1 24 1.9
A7C03NP.R1 a7c03np.r1 24 1.9
C3F12NP.R1 c3f12np.r1 24 1.9
A2H10NP.R1 a2h10np.r1 24 1.9
B1F11NP.R1 b1f11np.r1 24 2.7
A3H04NP.F1 a3h04np.f1 24 2.7
B3D03NP.R1 b3d03np.r1 24 2.7
B8B05NP.R1 b8b05np.r1 24 2.7
B1E06NP.R1 b1e06np.r1 24 2.7
A5G06NP.R1 a5g06np.r1 24 2.7
A3C02NP.R1 a3c02np.r1 24 2.7
A1G02NP.R1 a1g02np.r1 24 2.7
C3H07NP.R1 c3h07np.r1 24 2.7
C1A10NP.R1 c1a10np.r1 24 2.7
B4F01NP.F1 b4f01np.f1 24 2.7
B1E07NP.R1 b1e07np.r1 24 2.7
A7E08NP.R1 a7e08np.r1 24 2.7
A4D07NP.R1 a4d07np.r1 23 3.6
C5C01NP.R1 c5c01np.r1 23 3.6
B8H08NP.R1 b8h08np.r1 23 3.6
B1G02NP.R1 b1g02np.r1 23 3.6
A7B06NP.R1 a7b06np.r1 23 3.6
C1H05NP.F1 c1h05np.f1 23 3.6
B7F02NP.R1 b7f02np.r1 23 3.6
A2E02NP.R1 a2e02np.r1 23 3.6
A1H07NP.R1 a1h07np.r1 23 3.6
C3H11NP.R1 c3h11np.r1 23 3.6
B5E05NP.R1 b5e05np.r1 23 3.6
B1A12NP.R1 b1a12np.r1 23 3.6
A6D01NP.R1 a6d01np.r1 23 3.6
A1F02NP.R1 a1f02np.r1 23 3.6
B7F11NP.R1 b7f11np.r1 23 3.6
B1H03NP.R1 b1h03np.r1 23 3.6
A9B07NP.F1 a9b07np.f1 21 4.2
B3H11NP.R1 b3h11np.r1 23 5.0
B3F11NP.R1 b3f11np.r1 23 5.0
B5F10NP.R1 b5f10np.r1 23 5.0
A8D05NP.R1 a8d05np.r1 23 5.0
B3F06NP.R1 b3f06np.r1 22 6.9
C1E01NP.R1 c1e01np.r1 22 6.9
B2A03NP.R1 b2a03np.r1 22 6.9
A8B12NP.R1 a8b12np.r1 22 6.9
A4F05NP.R1 a4f05np.r1 22 6.9
A1A06NP.R1 a1a06np.r1 22 6.9
A8H05NP.R1 a8h05np.r1 22 6.9
A6E01NP.R1 a6e01np.r1 22 6.9
B1D07NP.R1 b1d07np.r1 22 6.9
A6B12NP.F1 a6b12np.f1 22 6.9
A4F04NP.R1 a4f04np.r1 22 6.9
A4E03NP.R1 a4e03np.r1 22 6.9
A9A01NP.F1 a9a01np.f1 22 6.9
A8D04NP.R1 a8d04np.r1 22 6.9
B8B09NP.R1 b8b09np.r1 22 6.9
B2A10NP.R1 b2a10np.r1 22 6.9
A3F10NP.R1 a3f10np.r1 22 6.9
A3F04NP.R1 a3f04np.r1 22 6.9
A1C06NP.R1 a1c06np.r1 22 6.9
A1D10NP.F1 a1d10np.f1 22 6.9
A1B02NP.R1 a1b02np.r1 20 9.1
B3F03NP.R1 b3f03np.r1 22 9.5
B3D11NP.R1 b3d11np.r1 22 9.5
B2C05NP.R1 b2c05np.r1 22 9.5
C5F08NP.R1 c5f08np.r1 22 9.5
B2B08NP.R1 b2b08np.r1 22 9.5
A1A11NP.R1 a1a11np.r1 22 9.5
B2C03NP.R1 b2c03np.r1 22 9.5
A5H09NP.R1 a5h09np.r1 22 9.5
A1D12NP.R1 a1d12np.r1 22 9.5
C5B09NP.R1 c5b09np.r1 22 9.5
C1F12NP.R1 c1f12np.r1 22 9.5
A3H06NP.F1 a3h06np.f1 22 9.5
A2A11NP.R1 a2a11np.r1 22 9.5
B7C03NP.R1 b7c03np.r1 22 9.5
B1F06NP.R1 b1f06np.r1 22 9.5
>B8D11NP.F1 b8d11np.f1
Length = 468
Score = 28.6 bits (56), Expect = 0.081
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1 / +2
Query: 226 HISCLHGTCK*CLCVACI 279
H CLH TC C AC+
Sbjct: 206 HKPCLHSTCPRAKCAACL 259
Score = 23.5 bits (45), Expect = 2.7
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 111 KWTRLMFHLPCLYTTNP 161
++ ++ H PCL++T P
Sbjct: 185 RYPHILIHKPCLHSTCP 235
>C1G07NP.R1 c1g07np.r1
Length = 504
Score = 26.7 bits (52), Expect = 0.29
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2 / -2
Query: 225 PLST*APEWSSYAASR 178
P+S+*+P W+S AASR
Sbjct: 344 PVSS*SPTWTSKAASR 297
>B1C11NP.R1 b1c11np.r1
Length = 546
Score = 26.3 bits (51), Expect = 0.39
Identities = 9/22 (40%), Positives = 12/22 (53%)
Frame = -1 / +1
Query: 277 YRQHISIICKSHAGKKYAPLHL 212
YR H+ +C+ H G P HL
Sbjct: 154 YRAHVRRLCQHHQGHCSWPYHL 219
>C3A07NP.R1 c3a07np.r1
Length = 481
Score = 25.8 bits (50), Expect = 0.54
Identities = 17/61 (27%), Positives = 21/61 (33%)
Frame = -3 / +2
Query: 299 NINMISAIQATHKHHLQVPCRQEICPSPLKHRNGPRTPRRDAHSCTRVCRVETW*MEHQS 120
N +A AT Q P + P P + P TP HS T E H +
Sbjct: 146 NATANAATTATITPVPQFPTAKPAAPGPSGQFSYPSTPAGWIHSATTPTHPEPKCYWHSA 325
Query: 119 G 117
G
Sbjct: 326 G 328
>B3G04NP.R1 b3g04np.r1
Length = 464
Score = 25.3 bits (49), Expect = 0.75
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3 / -1
Query: 263 KHHLQVPCRQEICPSPLKHRNGPRTPRRDAHSC 165
+ H Q PC+ E+C + R + R H C
Sbjct: 302 RRHGQRPCQHELCDRQIPDRPCWQWRSRHQHRC 204
>A6G03NP.R1 a6g03np.r1
Length = 471
Score = 25.3 bits (49), Expect = 0.75
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3 / -2
Query: 263 KHHLQVPCRQEICPSPLKHRNGPRTPRRDAHSC 165
+ H Q PC+ E+C + R + R H C
Sbjct: 380 RRHGQRPCQHELCDRQIPDRPCWQWRSRHQHRC 282
>B7D05NP.R1 b7d05np.r1
Length = 482
Score = 24.9 bits (48), Expect = 1.0
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +1 / -2
Query: 208 CLSGEGHISCLHGTCK*CLCVAC 276
CL + + CL +C C C C
Sbjct: 130 CLDDDRGLRCLAWSCCCCCCCCC 62
>A5B08NP.F1 a5b08np.f1
Length = 472
Score = 24.0 bits (46), Expect = 1.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3 / +1
Query: 260 HHLQVPCRQEICPSPLKH 207
HH + P RQE P+ L+H
Sbjct: 190 HHHRRPTRQERRPTTLQH 243
>A7C03NP.R1 a7c03np.r1
Length = 494
Score = 24.0 bits (46), Expect = 1.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 267 CCLYS*YHVY 296
CCLYS H+Y
Sbjct: 61 CCLYSVLHIY 90
>C3F12NP.R1 c3f12np.r1
Length = 529
Score = 24.0 bits (46), Expect = 1.9
Identities = 10/18 (55%), Positives = 11/18 (60%)
Frame = +2 / -1
Query: 11 LDEDFGEHSVSQIIGRRG 64
LDEDF H V +GR G
Sbjct: 355 LDEDFNGHVVGVELGRVG 302
>A2H10NP.R1 a2h10np.r1
Length = 557
Score = 24.0 bits (46), Expect = 1.9
Identities = 9/22 (40%), Positives = 11/22 (49%)
Frame = +1 / +2
Query: 211 LSGEGHISCLHGTCK*CLCVAC 276
L G G + HGTC+* C
Sbjct: 389 LQGHGSMGPAHGTCR*AFGELC 454
>B1F11NP.R1 b1f11np.r1
Length = 496
Score = 23.5 bits (45), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / +2
Query: 257 HLQVPCRQEICPSPLKHR 204
H P RQ CP L+HR
Sbjct: 437 HPPWPERQRACPQHLQHR 490
>A3H04NP.F1 a3h04np.f1
Length = 606
Score = 23.5 bits (45), Expect = 2.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3 / -3
Query: 290 MISAIQATHKHHLQVPCRQEICPSPLKHRN 201
++S Q Q +Q + PSPL+HR+
Sbjct: 505 LVSRPQKQQPMARQPMVQQPLLPSPLRHRS 416
>B3D03NP.R1 b3d03np.r1
Length = 547
Score = 23.5 bits (45), Expect = 2.7
Identities = 10/29 (34%), Positives = 14/29 (47%)
Frame = -3 / +3
Query: 266 HKHHLQVPCRQEICPSPLKHRNGPRTPRR 180
H+ VPC + P + R GPR R+
Sbjct: 27 HRFRGPVPCLRHGHPEQVGCRRGPRRARQ 113
>B8B05NP.R1 b8b05np.r1
Length = 463
Score = 23.5 bits (45), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / +2
Query: 257 HLQVPCRQEICPSPLKHR 204
H P RQ CP L+HR
Sbjct: 368 HPPWPERQRACPQHLQHR 421
>B1E06NP.R1 b1e06np.r1
Length = 465
Score = 23.5 bits (45), Expect = 2.7
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +1 / +3
Query: 10 PR*GLWRAQRLPNHW 54
PR LW R P+HW
Sbjct: 96 PRYPLWCLWRSPDHW 140
>A5G06NP.R1 a5g06np.r1
Length = 466
Score = 23.5 bits (45), Expect = 2.7
Identities = 6/20 (30%), Positives = 9/20 (45%)
Frame = -2 / +1
Query: 87 CFALAIFSPRRPMIWETLCS 28
C+ F P RP ++ C
Sbjct: 190 CYQYTGFQPNRPRLFRLSCR 249
>A3C02NP.R1 a3c02np.r1
Length = 468
Score = 23.5 bits (45), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / +2
Query: 257 HLQVPCRQEICPSPLKHR 204
H P RQ CP L+HR
Sbjct: 371 HPPWPERQRACPQHLQHR 424
>A1G02NP.R1 a1g02np.r1
Length = 524
Score = 23.5 bits (45), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / +3
Query: 257 HLQVPCRQEICPSPLKHR 204
H P RQ CP L+HR
Sbjct: 378 HPPWPERQRACPQHLQHR 431
>C3H07NP.R1 c3h07np.r1
Length = 508
Score = 23.5 bits (45), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / +2
Query: 257 HLQVPCRQEICPSPLKHR 204
H P RQ CP L+HR
Sbjct: 449 HPPWPERQRACPQHLQHR 502
>C1A10NP.R1 c1a10np.r1
Length = 483
Score = 23.5 bits (45), Expect = 2.7
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3 / +1
Query: 269 THKHHLQVPCRQEICPSPLKHRNGPRTPRRDAH 171
+H+ H R+ +CP + TPRR H
Sbjct: 85 SHQDHHLQGLRRGLCPDKFTNVTNGITPRRWLH 183
>B4F01NP.F1 b4f01np.f1
Length = 483
Score = 23.5 bits (45), Expect = 2.7
Identities = 9/24 (37%), Positives = 14/24 (57%)
Frame = -2 / +1
Query: 396 STRVINSNFNCSRRHLNKIVTNAY 325
+TR N+ NC + NK++ N Y
Sbjct: 121 ATRKSNTATNCQ*KPSNKLILNNY 192
>B1E07NP.R1 b1e07np.r1
Length = 457
Score = 23.5 bits (45), Expect = 2.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3 / -2
Query: 90 NLGKLLIKWTRLMFHLPCLYTTNPG 164
NLGK+L KW L + T PG
Sbjct: 213 NLGKMLAKWQATDPALSRTHPTLPG 139
>A7E08NP.R1 a7e08np.r1
Length = 431
Score = 23.5 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 204 EWSSYAASRCSLLYQGLSCR 145
+WS +A S L++G CR
Sbjct: 295 KWSGWAGSGPRWLFRGCLCR 236
>A4D07NP.R1 a4d07np.r1
Length = 349
Score = 23.1 bits (44), Expect = 3.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 227 CPSPLKHRNGPRT 189
CPSP+ H +G ++
Sbjct: 11 CPSPISHAHGTQS 49
>C5C01NP.R1 c5c01np.r1
Length = 327
Score = 23.1 bits (44), Expect = 3.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 120 RLMFHLPCLYT 152
R+MFH+P Y+
Sbjct: 97 RVMFHIPTRYS 129
>B8H08NP.R1 b8h08np.r1
Length = 520
Score = 23.1 bits (44), Expect = 3.6
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = -3 / +1
Query: 275 QATHKHHLQVPCRQEICPSPLKHRNGPRTP 186
Q T HH RQ C PR+P
Sbjct: 100 QQTSTHHTLTSHRQSPCVRTSSSSRSPRSP 189
>B1G02NP.R1 b1g02np.r1
Length = 499
Score = 23.1 bits (44), Expect = 3.6
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = +1 / -1
Query: 166 QE*ASRRGVRGPFRCLSGE 222
Q+ GV+GPF LSG+
Sbjct: 412 QDVRGEAGVKGPFTQLSGD 356
>A7B06NP.R1 a7b06np.r1
Length = 563
Score = 23.1 bits (44), Expect = 3.6
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +3 / +3
Query: 234 LPAWDLQMMLMCCLYS*YHVYILGLLEEDMSR 329
LP + + + CC H Y L D SR
Sbjct: 162 LPLFSIGALSPCCKTEPRHKYARNFLHHDSSR 257
>C1H05NP.F1 c1h05np.f1
Length = 423
Score = 23.1 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 11/22 (49%)
Frame = -1 / +1
Query: 139 GRWNISRVHFISSFPRLMLRFG 74
GRW S +HF+ L R G
Sbjct: 325 GRWKASIIHFVKLKGNLAGRHG 390
>B7F02NP.R1 b7f02np.r1
Length = 332
Score = 23.1 bits (44), Expect = 3.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1 / +1
Query: 61 R*KDSQSEASTLESCL*SG 117
R + Q A+T++SC SG
Sbjct: 67 RKSNQQPRATTVQSCTESG 123
>A2E02NP.R1 a2e02np.r1
Length = 321
Score = 23.1 bits (44), Expect = 3.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1 / +2
Query: 25 WRAQRLPNHWPSR 63
WR Q LP HW R
Sbjct: 173 WRWQDLPCHWCRR 211
>A1H07NP.R1 a1h07np.r1
Length = 471
Score = 23.1 bits (44), Expect = 3.6
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +1 / +3
Query: 10 PR*GLWRAQRLPNHW 54
PR LW R P+HW
Sbjct: 24 PRYPLWCLCRSPDHW 68
>C3H11NP.R1 c3h11np.r1
Length = 513
Score = 23.1 bits (44), Expect = 3.6
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = -3 / +2
Query: 275 QATHKHHLQVPCRQEICPSPLKHRNGPRTP 186
Q T HH RQ C PR+P
Sbjct: 110 QQTSTHHTLTSHRQSPCVRTSSSSRSPRSP 199
>B5E05NP.R1 b5e05np.r1
Length = 538
Score = 23.1 bits (44), Expect = 3.6
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +1 / +2
Query: 10 PR*GLWRAQRLPNHW 54
PR LW R P+HW
Sbjct: 161 PRYPLWCLCRSPDHW 205
>B1A12NP.R1 b1a12np.r1
Length = 557
Score = 23.1 bits (44), Expect = 3.6
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +1 / +2
Query: 10 PR*GLWRAQRLPNHW 54
PR LW R P+HW
Sbjct: 128 PRYPLWCLCRSPDHW 172
>A6D01NP.R1 a6d01np.r1
Length = 455
Score = 23.1 bits (44), Expect = 3.6
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +1 / +1
Query: 10 PR*GLWRAQRLPNHW 54
PR LW R P+HW
Sbjct: 364 PRYPLWCLCRSPDHW 408
>A1F02NP.R1 a1f02np.r1
Length = 530
Score = 23.1 bits (44), Expect = 3.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 120 RLMFHLPCLYT 152
R+MFH+P Y+
Sbjct: 138 RVMFHIPTRYS 170
>B7F11NP.R1 b7f11np.r1
Length = 508
Score = 23.1 bits (44), Expect = 3.6
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = -3 / +3
Query: 275 QATHKHHLQVPCRQEICPSPLKHRNGPRTP 186
Q T HH RQ C PR+P
Sbjct: 105 QQTSTHHTLTSHRQSPCVRTSSSSRSPRSP 194
>B1H03NP.R1 b1h03np.r1
Length = 468
Score = 23.1 bits (44), Expect = 3.6
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +1 / +3
Query: 10 PR*GLWRAQRLPNHW 54
PR LW R P+HW
Sbjct: 393 PRYPLWCLCRSPDHW 437
>A9B07NP.F1 a9b07np.f1
Length = 536
Score = 20.8 bits (39), Expect(2) = 4.2
Identities = 5/12 (41%), Positives = 8/12 (66%)
Frame = -3 / +2
Query: 41 RRCARQSPHRGR 6
+RC ++ P GR
Sbjct: 107 KRCKKKRPKDGR 142
Score = 20.8 bits (39), Expect(2) = 4.2
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -3 / +1
Query: 260 HHLQVPCRQEIC 225
H L+V CR C
Sbjct: 37 HVLKVTCRTSNC 72
>B3H11NP.R1 b3h11np.r1
Length = 353
Score = 22.6 bits (43), Expect = 5.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 188 PRRDAHSCTRVCRVET 141
P+R HS R+CR+ +
Sbjct: 312 PKRTLHSWIRLCRLSS 265
>B3F11NP.R1 b3f11np.r1
Length = 379
Score = 22.6 bits (43), Expect = 5.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 188 PRRDAHSCTRVCRVET 141
P+R HS R+CR+ +
Sbjct: 312 PKRTLHSWIRLCRLSS 265
>B5F10NP.R1 b5f10np.r1
Length = 539
Score = 22.6 bits (43), Expect = 5.0
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3 / +2
Query: 224 PSPLKHRNGPRTPRRDAHS 168
P PL+ R PR R H
Sbjct: 239 PPPLRPRLPPRPSTRLVHH 295
>A8D05NP.R1 a8d05np.r1
Length = 432
Score = 22.6 bits (43), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2 / +2
Query: 357 RHLNKIVTNAYSCLPRVTPKY 295
RHL+ + + CLPR +Y
Sbjct: 272 RHLHPSDSATHPCLPRPVARY 334
>B3F06NP.R1 b3f06np.r1
Length = 571
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +1
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 235 KHRPSIYRPRRSLHRC 282
>C1E01NP.R1 c1e01np.r1
Length = 473
Score = 22.1 bits (42), Expect = 6.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2 / +2
Query: 207 PEWSSYAASR 178
PEW YAA R
Sbjct: 389 PEWDDYAARR 418
>B2A03NP.R1 b2a03np.r1
Length = 496
Score = 22.1 bits (42), Expect = 6.9
Identities = 12/27 (44%), Positives = 13/27 (47%)
Frame = +3 / +3
Query: 6 SPSMRTLASTASPKSLAVEVKR*PKRS 86
SPS RTL T SL+ P RS
Sbjct: 24 SPSSRTLRPTRPSSSLSSSRSSSPTRS 104
>A8B12NP.R1 a8b12np.r1
Length = 438
Score = 22.1 bits (42), Expect = 6.9
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3 / +3
Query: 239 RQEICPSPLKHRNGPRTPRRDAHSCTR 159
R++ PSP RN P + + +C R
Sbjct: 162 RRQPSPSPPPSRNSPLSAPAPSPTCPR 242
>A4F05NP.R1 a4f05np.r1
Length = 238
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2 / +2
Query: 228 MPLST*APEWSSYAASRCSLLYQ 160
+P + P WSS A+ ++LY+
Sbjct: 116 LPAADAPPAWSSAQAAVSNILYE 184
>A1A06NP.R1 a1a06np.r1
Length = 563
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +2
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 236 KHRPSIYRPRRSLHRC 283
>A8H05NP.R1 a8h05np.r1
Length = 423
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +2
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 239 KHRPSIYRPRRSLHRC 286
>A6E01NP.R1 a6e01np.r1
Length = 528
Score = 22.1 bits (42), Expect = 6.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3 / +3
Query: 260 HHLQVPCRQEICPSPLKHR 204
+HL +P + + CP L R
Sbjct: 165 YHLPIPNKPKTCPHNLNFR 221
>B1D07NP.R1 b1d07np.r1
Length = 490
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +1
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 232 KHRPSIYRPRRSLHRC 279
>A6B12NP.F1 a6b12np.f1
Length = 443
Score = 22.1 bits (42), Expect = 6.9
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 192 YAASRCSLLYQ 160
++ASRC+L YQ
Sbjct: 379 FSASRCTLYYQ 347
>A4F04NP.R1 a4f04np.r1
Length = 484
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +1
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 226 KHRPSIYRPRRSLHRC 273
>A4E03NP.R1 a4e03np.r1
Length = 485
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +2
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 227 KHRPSIYRPRRSLHRC 274
>A9A01NP.F1 a9a01np.f1
Length = 449
Score = 22.1 bits (42), Expect = 6.9
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = -3 / +3
Query: 266 HKHHLQVPCRQEICP 222
H HH PC I P
Sbjct: 114 HHHHHHRPCHPSIMP 158
>A8D04NP.R1 a8d04np.r1
Length = 367
Score = 22.1 bits (42), Expect = 6.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2 / -2
Query: 189 AASRCSLLYQGLSCRDMVDGT 127
A+SR SLL GL +VDG+
Sbjct: 360 ASSRGSLLLDGLEDVAVVDGS 298
>B8B09NP.R1 b8b09np.r1
Length = 454
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +2
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 281 KHRPSIYRPRRSLHRC 328
>B2A10NP.R1 b2a10np.r1
Length = 539
Score = 22.1 bits (42), Expect = 6.9
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +1 / +1
Query: 25 WRAQRLPNHW 54
WR LP +W
Sbjct: 172 WRTSTLPLNW 201
>A3F10NP.R1 a3f10np.r1
Length = 538
Score = 22.1 bits (42), Expect = 6.9
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3 / -3
Query: 114 WTRLMFHLP 140
W RL+FH P
Sbjct: 407 WVRLLFHCP 381
Score = 21.7 bits (41), Expect = 9.5
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -1 / +1
Query: 142 HGRWNISRV 116
+G+WN SR
Sbjct: 379 YGQWNSSRT 405
>A3F04NP.R1 a3f04np.r1
Length = 529
Score = 22.1 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3 / +3
Query: 212 KHRNGPRTPRRDAHSC 165
KHR PRR H C
Sbjct: 255 KHRPSIYRPRRSLHRC 302
>A1C06NP.R1 a1c06np.r1
Length = 466
Score = 22.1 bits (42), Expect = 6.9
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +1 / +1
Query: 25 WRAQRLPNHW 54
WR LP +W
Sbjct: 157 WRTSTLPLNW 186
>A1D10NP.F1 a1d10np.f1
Length = 478
Score = 22.1 bits (42), Expect = 6.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3 / +2
Query: 278 IQATHKHHLQVPCRQEICPS 219
I+ + KH L++P + I P+
Sbjct: 71 IKNSRKHKLKLPYKFMISPA 130
>A1B02NP.R1 a1b02np.r1
Length = 486
Score = 20.3 bits (38), Expect(2) = 9.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -1 / +3
Query: 142 HGRWNISRV 116
H RWN RV
Sbjct: 372 HSRWNRRRV 398
Score = 19.8 bits (37), Expect(2) = 9.1
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3 / +1
Query: 278 IQATHKHHLQVPCRQEICPSPLKHRNGPRT 189
I+ +HH Q+ R+ P K GP T
Sbjct: 85 IKVLRRHHQQMRQRKTPEPPRKKSPWGPNT 174
>B3F03NP.R1 b3f03np.r1
Length = 477
Score = 21.7 bits (41), Expect = 9.5
Identities = 9/32 (28%), Positives = 16/32 (49%)
Frame = +1 / -1
Query: 10 PR*GLWRAQRLPNHWPSR*KDSQSEASTLESC 105
PR LW ++ + W S + ++ A +SC
Sbjct: 177 PRYWLWPSRAMARGWASHSQRTEE*APWRQSC 82
>B3D11NP.R1 b3d11np.r1
Length = 475
Score = 21.7 bits (41), Expect = 9.5
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = +2 / +1
Query: 92 PWKAAYKVDPTDVPSTMSLH 151
PW P+ VPS+ H
Sbjct: 178 PWMTPVATPPSPVPSSRPTH 237
>B2C05NP.R1 b2c05np.r1
Length = 461
Score = 21.7 bits (41), Expect = 9.5
Identities = 6/14 (42%), Positives = 8/14 (56%)
Frame = +1 / -1
Query: 259 CLCVACIADIMFIF 300
C +AC+A M F
Sbjct: 419 C*AMACLASSMRAF 378
>C5F08NP.R1 c5f08np.r1
Length = 320
Score = 21.7 bits (41), Expect = 9.5
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1 / +2
Query: 31 AQRLPNHWP 57
AQ P HWP
Sbjct: 212 AQPCPPHWP 238
>B2B08NP.R1 b2b08np.r1
Length = 532
Score = 21.7 bits (41), Expect = 9.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1 / +3
Query: 271 QHISIICKSHAGKKYAPLHLST 206
QHI +C H G +H T
Sbjct: 381 QHICHVCIKHIGYPQLSVHTPT 446
>A1A11NP.R1 a1a11np.r1
Length = 549
Score = 21.7 bits (41), Expect = 9.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -2 / +3
Query: 159 GLSCRDMVDGTSVGS 115
G C+D++DG V +
Sbjct: 354 GTRCKDVIDGEKVNA 398
>B2C03NP.R1 b2c03np.r1
Length = 384
Score = 21.7 bits (41), Expect = 9.5
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2 / -3
Query: 14 DEDFGEHSVSQIIGRRGEKIAKAKH 88
+E+F Q RRG+++ +A+H
Sbjct: 178 EEEFEVGVARQSRERRGDRVVQAEH 104
>A5H09NP.R1 a5h09np.r1
Length = 471
Score = 21.7 bits (41), Expect = 9.5
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +1 / +1
Query: 25 WRAQRLPNHW 54
WR+Q P W
Sbjct: 352 WRSQLQPTAW 381
>A1D12NP.R1 a1d12np.r1
Length = 531
Score = 21.7 bits (41), Expect = 9.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3 / +1
Query: 275 QATHKHHLQVPCRQEICPSP 216
QA HH CRQE SP
Sbjct: 439 QALAGHHA*ALCRQEAHRSP 498
>C5B09NP.R1 c5b09np.r1
Length = 451
Score = 21.7 bits (41), Expect = 9.5
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1 / +1
Query: 31 AQRLPNHWP 57
AQ P HWP
Sbjct: 211 AQPCPPHWP 237
>C1F12NP.R1 c1f12np.r1
Length = 512
Score = 21.7 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2 / +3
Query: 101 AAYKVDPTDVPSTMSLH 151
AAY+VD P + S H
Sbjct: 420 AAYQVDRPHHPGSGSAH 470
>A3H06NP.F1 a3h06np.f1
Length = 465
Score = 21.7 bits (41), Expect = 9.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3 / +2
Query: 248 VPCRQEICPSPL 213
VPC ICP P+
Sbjct: 404 VPCPPCICPPPI 439
>A2A11NP.R1 a2a11np.r1
Length = 467
Score = 21.7 bits (41), Expect = 9.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 48 IWETLCSPKSSS 13
+W + CSPK++S
Sbjct: 385 LWSSGCSPKTTS 420
>B7C03NP.R1 b7c03np.r1
Length = 458
Score = 21.7 bits (41), Expect = 9.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3 / -3
Query: 216 WRGAYFLP 239
WRG+Y LP
Sbjct: 147 WRGSYMLP 124
>B1F06NP.R1 b1f06np.r1
Length = 454
Score = 21.7 bits (41), Expect = 9.5
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3 / -1
Query: 194 RTPRRDAHS 168
R+PRR H+
Sbjct: 286 RSPRRSCHA 260
Database: /phillip/Ncr/np_est
Posted date: Jan 27, 2002 3:48 PM
Number of letters in database: 1,147,514
Number of sequences in database: 2682
Lambda K H
0.318 0.135 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1282474
Number of Sequences: 2682
Number of extensions: 18853
Number of successful extensions: 740
Number of sequences better than 10.0: 91
length of query: 139
length of database: 382,504
effective HSP length: 37
effective length of query: 101
effective length of database: 283,270
effective search space: 28610270
effective search space used: 28610270
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)
S2: 41 (21.7 bits)