Score E
Sequences producing significant alignments: (bits) Value
gb|BF600425.1|BF600425 265030 MARC 3BOV Bos taurus cDNA 5'. 28 5e-04
gb|AI376180.1|AI376180 ta59g09.x1 Soares_total_fetus_Nb2HF8... 34 0.038
gb|AI500588.1|AI500588 tn93c05.x1 NCI_CGAP_Ut2 Homo sapiens... 24 0.039
gb|AA969375.1|AA969375 on58e04.s1 Soares_NFL_T_GBC_S1 Homo ... 23 0.040
gb|AI696809.1|AI696809 wc74b11.x1 NCI_CGAP_Pan1 Homo sapien... 22 0.045
gb|BG609384.1|BG609384 323212 MARC 1PIG Sus scrofa cDNA 5'. 24 0.050
gb|AW539629.1|AW539629 C0122D06-3 NIA Mouse E7.5 Extraembry... 24 0.053
gb|AI954183.1|AI954183 wx80g05.x1 NCI_CGAP_Ov38 Homo sapien... 24 0.067
gb|AI797929.1|AI797929 we83b03.x1 Soares_NFL_T_GBC_S1 Homo ... 23 0.095
gb|BF191117.1|BF191117 237841 MARC 2PIG Sus scrofa cDNA 5'. 25 0.12
gb|AI362888.1|AI362888 qy81a01.x1 NCI_CGAP_Brn25 Homo sapie... 25 0.12
gb|AI419417.1|AI419417 tf28d03.x1 NCI_CGAP_Brn23 Homo sapie... 25 0.15
gb|AW188491.1|AW188491 xj99e08.x1 NCI_CGAP_Co18 Homo sapien... 24 0.15
dbj|AV700522.1|AV700522 AV700522 GKC Homo sapiens cDNA clon... 25 0.18
gb|BE561969.1|BE561969 601346701F1 NIH_MGC_8 Homo sapiens c... 35 0.23
gb|AW478769.1|AW478769 21616 MARC 2BOV Bos taurus cDNA 5'. 27 0.24
gb|AI744768.1|AI744768 tr14e10.x1 NCI_CGAP_Ov23 Homo sapien... 25 0.25
gb|BE991965.1|BE991965 UI-M-BZ1-beb-e-03-0-UI.s1 NIH_BMAP_M... 20 0.28
gb|AI571861.1|AI571861 to20d01.x1 NCI_CGAP_Ut2 Homo sapiens... 33 0.28
gb|BI274531.1|BI274531 UI-R-CW0-bwj-h-09-0-UI.s1 UI-R-CW0 R... 26 0.28
gb|AI712788.1|AI712788 UI-R-AF1-aax-e-07-0-UI.s1 UI-R-AF1 R... 22 0.29
dbj|AV720130.1|AV720130 AV720130 GLC Homo sapiens cDNA clon... 24 0.32
gb|AW839377.1|AW839377 RC0-LT0070-210100-012-a06 LT0070 Hom... 31 0.32
gb|AW082594.1|AW082594 xc20b03.x1 NCI_CGAP_Co19 Homo sapien... 24 0.35
gb|AI289629.1|AI289629 qw29c06.x1 NCI_CGAP_Ut4 Homo sapiens... 29 0.38
gb|AW118010.1|AW118010 xe60f01.x1 NCI_CGAP_Ut3 Homo sapiens... 24 0.39
gb|AW132034.1|AW132034 xe71c11.x1 NCI_CGAP_Ut3 Homo sapiens... 29 0.40
gb|AI591387.1|AI591387 ts10h06.x1 NCI_CGAP_Pan1 Homo sapien... 28 0.43
gb|AW130949.1|AW130949 xe67e12.x1 NCI_CGAP_Ut3 Homo sapiens... 32 0.43
gb|AW130202.1|AW130202 xf29h07.x1 NCI_CGAP_Ut1 Homo sapiens... 27 0.44
gb|AW541787.1|AW541787 C0149E08-3 NIA Mouse E7.5 Extraembry... 23 0.45
gb|BF709314.1|BF709314 MI-P-AY0-nah-b-08-0-UI.s1 MI-P-AY0 S... 22 0.49
gb|AW235035.1|AW235035 xn16g04.x1 NCI_CGAP_Li5 Homo sapiens... 29 0.54
gb|BI007977.1|BI007977 QV3-RT0066-020201-551-e08 RT0066 Hom... 27 0.55
gb|AW048522.1|AW048522 UI-M-BH1-alx-a-09-0-UI.s1 NIH_BMAP_M... 28 0.55
gb|AW235489.1|AW235489 xn13b03.x1 NCI_CGAP_Li5 Homo sapiens... 29 0.57
gb|BG064344.1|BG064344 H3018E03-3 NIA Mouse 15K cDNA Clone ... 24 0.61
gb|BE721703.1|BE721703 189311 MARC 2BOV Bos taurus cDNA 5'. 25 0.63
gb|AI969567.1|AI969567 wz68g06.x1 NCI_CGAP_Mel15 Homo sapie... 25 0.64
gb|AW541496.1|AW541496 C0145H02-3 NIA Mouse E7.5 Extraembry... 24 0.65
gb|BF170301.1|BF170301 PCL0597 Myeloma (PCL) cDNA library H... 25 0.66
gb|BE642623.1|BE642623 Cri2_6_I24_SP6 Ceratopteris Spore Li... 35 0.71
gb|AI863466.1|AI863466 tz41a08.x1 NCI_CGAP_Brn52 Homo sapie... 21 0.73
gb|AI633402.1|AI633402 to46c11.x1 NCI_CGAP_Ut4 Homo sapiens... 21 0.73
gb|BF703171.1|BF703171 MI-P-E4-abo-e-03-1-UM.s1 MI-P-E4 Sus... 24 0.75
gb|AI741926.1|AI741926 wg38a01.x1 Soares_NSF_F8_9W_OT_PA_P_... 21 0.77
gb|AI358455.1|AI358455 qx19d12.x1 NCI_CGAP_Lym12 Homo sapie... 29 0.89
gb|BE985447.1|BE985447 UI-M-CG0p-bem-f-08-0-UI.s1 NIH_BMAP_... 24 0.90
gb|AW084425.1|AW084425 xc58c08.x1 NCI_CGAP_Eso2 Homo sapien... 25 0.93
gb|AW105383.1|AW105383 xd61b07.x1 NCI_CGAP_Ov23 Homo sapien... 24 0.95
gb|AI815237.1|AI815237 wk72g05.x1 NCI_CGAP_Pan1 Homo sapien... 26 0.97
gb|AW951122.1|AW951122 EST363192 MAGE resequences, MAGA Hom... 22 1.0
gb|AI439020.1|AI439020 tc89e05.x1 NCI_CGAP_CLL1 Homo sapien... 20 1.1
gb|BE278777.1|BE278777 601159006F1 NIH_MGC_21 Homo sapiens ... 31 1.1
gb|AI634682.1|AI634682 wa07h08.x1 NCI_CGAP_Kid11 Homo sapie... 24 1.2
gb|AW552177.1|AW552177 L0209D02-3 NIA Mouse Newborn Ovary c... 25 1.2
gb|AI558302.1|AI558302 fb78d10.x1 Zebrafish WashU MPIMG EST... 21 1.2
gb|BE951598.1|BE951598 UI-M-CC0-ayc-e-03-0-UI.s1 NIH_BMAP_R... 22 1.2
gb|BF339171.1|BF339171 602038476F1 NCI_CGAP_Brn64 Homo sapi... 27 1.2
gb|AI922543.1|AI922543 wm89d06.x1 NCI_CGAP_Ut2 Homo sapiens... 28 1.2
gb|AI680463.1|AI680463 tw81f02.x1 NCI_CGAP_Ut3 Homo sapiens... 28 1.3
gb|AW019662.1|AW019662 fd55c10.x1 Zebrafish WashU MPIMG EST... 24 1.3
gb|BF458213.1|BF458213 UI-M-BZ1-blm-b-08-0-UI.s1 NIH_BMAP_M... 29 1.3
gb|AI690751.1|AI690751 tx88h11.x1 NCI_CGAP_Ut4 Homo sapiens... 26 1.3
gb|AI354630.1|AI354630 qu95b05.x1 NCI_CGAP_Gas4 Homo sapien... 29 1.3
gb|AI439256.1|AI439256 ti59b11.x1 NCI_CGAP_Lym12 Homo sapie... 28 1.3
gb|BF623018.1|BF623018 HVSMEa0012K08f Hordeum vulgare seedl... 34 1.3
gb|AI624084.1|AI624084 ts41f06.x1 NCI_CGAP_Ut1 Homo sapiens... 34 1.3
gb|AI305189.1|AI305189 ql90b08.x1 Soares_NhHMPu_S1 Homo sap... 28 1.4
gb|AW661687.1|AW661687 ESTPMMC19F Penaeus monodon's abdomin... 25 1.4
gb|BG429608.1|BG429608 602501289F1 NIH_MGC_75 Homo sapiens ... 26 1.4
gb|AW632361.1|AW632361 92206 MARC 1BOV Bos taurus cDNA 5'. 27 1.4
gb|AI585907.1|AI585907 vs22h03.x1 Barstead mouse myotubes M... 30 1.4
gb|AW235482.1|AW235482 xn12e03.x1 NCI_CGAP_Li5 Homo sapiens... 18 1.4
gb|BI287959.1|BI287959 UI-R-CX0s-ccw-c-11-0-UI.s1 UI-R-CX0s... 22 1.5
gb|AI679663.1|AI679663 tu65b01.x1 NCI_CGAP_Gas4 Homo sapien... 28 1.5
gb|AW167926.1|AW167926 xg57b11.x1 NCI_CGAP_Ut4 Homo sapiens... 27 1.5
gb|AW088805.1|AW088805 xd30e09.x1 NCI_CGAP_Ov23 Homo sapien... 24 1.5
gb|AI845379.1|AI845379 UI-M-BG0-ahx-g-09-0-UI.s1 NIH_BMAP_M... 23 1.5
gb|BF671252.1|BF671252 602151096F1 NIH_MGC_81 Homo sapiens ... 26 1.6
gb|BF702564.1|BF702564 MI-P-E3-aak-g-10-1-UM.s1 MI-P-E3 Sus... 21 1.6
gb|BE232625.1|BE232625 137704 MARC 1PIG Sus scrofa cDNA 5'. 20 1.7
gb|AW054914.1|AW054914 ws96g10.x1 NCI_CGAP_Co3 Homo sapiens... 21 1.7
gb|AW667244.1|AW667244 GA__Ea0007P11 Gossypium arboreum 7-1... 22 1.7
gb|BF702351.1|BF702351 MI-P-A2-aas-a-12-1-UM.s1 MI-P-A2 Sus... 26 1.7
gb|AI566003.1|AI566003 tn52b12.x1 NCI_CGAP_Kid11 Homo sapie... 23 1.7
gb|BF074442.1|BF074442 221861 MARC 2BOV Bos taurus cDNA 5'. 21 1.7
gb|BF704254.1|BF704254 MI-P-O3-aay-f-05-1-UM.s1 MI-P-O3 Sus... 22 1.7
gb|AA528029.1|AA528029 nh90h05.s1 NCI_CGAP_Br1.1 Homo sapie... 23 1.8
gb|AW246713.1|AW246713 2822241.3prime NIH_MGC_7 Homo sapien... 24 1.8
gb|BF990093.1|BF990093 MR3-GN0149-251000-001-f05 GN0149 Hom... 27 1.8
gb|BF708870.1|BF708870 MI-P-AY0-nad-c-05-0-UI.s1 MI-P-AY0 S... 34 1.8
gb|BE994106.1|BE994106 UI-M-BZ1-bjk-h-09-0-UI.s1 NIH_BMAP_M... 34 1.8
gb|BF620657.2|BF620657 HVSMEc0020I03f Hordeum vulgare seedl... 34 1.8
gb|AW168650.1|AW168650 xi92c03.x1 NCI_CGAP_Mel3 Homo sapien... 34 1.8
gb|AI689528.1|AI689528 tx13d06.x1 NCI_CGAP_Ut4 Homo sapiens... 20 1.8
gb|AI954481.1|AI954481 wx83c04.x1 NCI_CGAP_Ov38 Homo sapien... 21 1.9
gb|BE973487.1|BE973487 601652323R2 NIH_MGC_82 Homo sapiens ... 21 1.9
gb|BF673125.1|BF673125 602153041F1 NIH_MGC_81 Homo sapiens ... 25 2.0
gb|AW779165.1|AW779165 ho50b01.x1 Soares_NFL_T_GBC_S1 Homo ... 26 2.0
gb|BI113759.1|BI113759 602860960F1 NIH_MGC_17 Homo sapiens ... 26 2.0
gb|AW168121.1|AW168121 xg60b10.x1 NCI_CGAP_Ut4 Homo sapiens... 24 2.0
gb|BF395107.1|BF395107 UI-R-CM0-bjj-d-09-0-UI.s1 UI-R-CM0 R... 24 2.0
gb|AW192042.1|AW192042 xl79a11.x1 NCI_CGAP_Pan1 Homo sapien... 27 2.0
gb|AI978854.1|AI978854 wr60f03.x1 NCI_CGAP_Ut1 Homo sapiens... 24 2.1
gb|AI540850.1|AI540850 tp68d01.x1 NCI_CGAP_Ut3 Homo sapiens... 20 2.2
dbj|AV700315.1|AV700315 AV700315 GKC Homo sapiens cDNA clon... 25 2.2
gb|AI863029.1|AI863029 wm45e09.x1 NCI_CGAP_Ut4 Homo sapiens... 24 2.2
gb|AW538143.1|AW538143 C0103G03-3 NIA Mouse E7.5 Extraembry... 21 2.2
gb|AI661761.1|AI661761 va45e08.x1 Soares mouse 3NME12 5 Mus... 29 2.2
gb|BE723529.1|BE723529 193398 MARC 4BOV Bos taurus cDNA 5'. 26 2.2
dbj|AV651124.1|AV651124 AV651124 GLC Homo sapiens cDNA clon... 25 2.3
gb|AI633009.1|AI633009 tz33d02.x1 NCI_CGAP_Ut2 Homo sapiens... 24 2.3
gb|BE232718.1|BE232718 137740 MARC 1PIG Sus scrofa cDNA 5'. 21 2.3
dbj|AV646718.1|AV646718 AV646718 GLC Homo sapiens cDNA clon... 25 2.3
gb|AI872164.1|AI872164 tz62c01.x1 NCI_CGAP_Ov35 Homo sapien... 26 2.3
gb|AI419212.1|AI419212 tf21a07.x1 NCI_CGAP_Brn23 Homo sapie... 28 2.3
dbj|BB553356.1|BB553356 BB553356 RIKEN full-length enriched... 24 2.4
gb|BE966298.2|BE966298 601660538R1 NIH_MGC_71 Homo sapiens ... 21 2.4
gb|BF763492.1|BF763492 RC6-CS0072-271000-011-C11 CS0072 Hom... 24 2.4
gb|AI678302.1|AI678302 tu80d01.x1 NCI_CGAP_Gas4 Homo sapien... 27 2.4
gb|T02987.1|T02987 FB19F5 Fetal brain, Stratagene Homo sapi... 33 2.5
gb|W41891.1|W41891 mc64d04.r1 Soares mouse embryo NbME13.5 ... 33 2.5
gb|AW786759.1|AW786759 120240 MARC 1PIG Sus scrofa cDNA 5'. 24 2.5
gb|AI679098.1|AI679098 tu61c01.x1 NCI_CGAP_Gas4 Homo sapien... 27 2.5
gb|AW964532.1|AW964532 EST376605 MAGE resequences, MAGH Hom... 25 2.6
gb|BF710113.1|BF710113 MI-P-AY1-nqb-e-09-0-UI.s1 MI-P-AY1 S... 23 2.6
gb|AW192241.1|AW192241 xl81h09.x1 NCI_CGAP_Pan1 Homo sapien... 21 2.6
gb|AA814407.1|AA814407 nz12c07.s1 NCI_CGAP_GCB1 Homo sapien... 27 2.6
gb|AI889493.1|AI889493 wn05b12.x1 NCI_CGAP_Ut1 Homo sapiens... 30 2.7
gb|BF608126.1|BF608126 MY1_001140 Mouse 9-day fetus cDNA li... 25 2.7
gb|AW169496.1|AW169496 xj29b05.x1 NCI_CGAP_Ut2 Homo sapiens... 27 2.7
gb|BE420564.1|BE420564 HWM000.C01 ITEC HWM Barley Leaf Libr... 22 2.8
gb|AI560659.1|AI560659 tq60f11.x1 NCI_CGAP_Ut1 Homo sapiens... 24 2.8
gb|AI537509.1|AI537509 tp09h09.x1 NCI_CGAP_Gas4 Homo sapien... 29 2.8
gb|BG113712.1|BG113712 602284230F1 NIH_MGC_86 Homo sapiens ... 24 2.9
gb|BI274137.1|BI274137 UI-R-CW0-bwf-d-08-0-UI.s1 UI-R-CW0 R... 24 2.9
gb|AW641356.1|AW641356 cm06e06.w1 Blackshear/Soares normali... 26 3.0
gb|BE773004.1|BE773004 RC1-FT0134-290600-011-g06 FT0134 Hom... 23 3.0
gb|AI442762.1|AI442762 sa26a12.x1 Gm-c1004 Glycine max cDNA... 26 3.0
gb|AI690961.1|AI690961 tq02f12.x1 NCI_CGAP_Ut3 Homo sapiens... 26 3.2
gb|AI075872.1|AI075872 oz25c08.x1 Soares_total_fetus_Nb2HF8... 21 3.2
gb|AW235028.1|AW235028 xn16b08.x1 NCI_CGAP_Li5 Homo sapiens... 27 3.2
gb|BF395626.1|BF395626 UI-R-CM0-bjp-c-02-0-UI.s1 UI-R-CM0 R... 24 3.2
gb|AW074172.1|AW074172 xb08g08.x1 NCI_CGAP_GU1 Homo sapiens... 26 3.2
gb|AA946741.1|AA946741 oq50a08.s1 NCI_CGAP_Kid5 Homo sapien... 28 3.2
gb|AI256499.1|AI256499 ui87b01.x1 Sugano mouse liver mlia M... 24 3.3
gb|AI635216.1|AI635216 tz22e12.x1 NCI_CGAP_Ut2 Homo sapiens... 23 3.4
gb|AW548438.1|AW548438 L0036G09-3 NIA Mouse E12.5 Female Me... 26 3.4
gb|AI844289.1|AI844289 UI-M-AL1-ahm-c-10-0-UI.s1 NIH_BMAP_M... 28 3.4
dbj|AV223007.1|AV223007 AV223007 RIKEN full-length enriched... 33 3.5
gb|BF797310.1|BF797310 602256931F1 NIH_MGC_85 Homo sapiens ... 33 3.5
gb|BF708550.1|BF708550 MI-P-AY0-ncn-c-11-0-UI.s1 MI-P-AY0 S... 33 3.5
gb|BE788113.1|BE788113 601480037F1 NIH_MGC_68 Homo sapiens ... 33 3.5
gb|BE884890.1|BE884890 601506823F1 NIH_MGC_71 Homo sapiens ... 33 3.5
gb|BE454616.1|BE454616 HVSMEh0094M06f Hordeum vulgare 5-45 ... 33 3.5
gb|BF844490.1|BF844490 RC5-HT0983-211200-011-H10 HT0983 Hom... 26 3.5
gb|AW074605.1|AW074605 xa89a05.x1 NCI_CGAP_Co17 Homo sapien... 21 3.5
gb|BG901151.1|BG901151 HOA54-1-E3.R HOA (Human Osteoarthrit... 27 3.5
gb|AW028007.1|AW028007 wv61b04.x1 NCI_CGAP_Gas4 Homo sapien... 24 3.5
gb|AI811520.1|AI811520 tw43g09.x1 NCI_CGAP_Ut1 Homo sapiens... 26 3.6
dbj|BB345187.1|BB345187 BB345187 RIKEN full-length enriched... 27 3.6
gb|AI481215.1|AI481215 vh21a12.x1 Soares_mammary_gland_NbMM... 25 3.6
gb|AW104146.1|AW104146 xd65f07.x1 NCI_CGAP_Ov23 Homo sapien... 21 3.7
gb|AI323692.1|AI323692 mq28a09.x1 Barstead MPLRB1 Mus muscu... 20 3.7
gb|BE723556.1|BE723556 193422 MARC 4BOV Bos taurus cDNA 5'. 24 3.7
gb|AI589091.1|AI589091 tf80h04.x1 NCI_CGAP_Brn23 Homo sapie... 21 3.8
gb|AW574690.1|AW574690 UI-HF-BK0-aba-e-07-0-UI.s1 NIH_MGC_3... 27 3.8
gb|BG286800.1|BG286800 602382659F1 NIH_MGC_93 Homo sapiens ... 24 3.8
gb|AI347701.1|AI347701 qp01f12.x1 NCI_CGAP_Kid5 Homo sapien... 26 4.0
gb|AI144116.1|AI144116 qb62a09.x1 NCI_CGAP_Brn23 Homo sapie... 24 4.0
gb|AI568346.1|AI568346 th13a12.x1 NCI_CGAP_CLL1 Homo sapien... 25 4.1
gb|AI675777.1|AI675777 wd15c08.x1 Soares_NFL_T_GBC_S1 Homo ... 29 4.2
gb|AW632901.1|AW632901 bl01f01.x1 Blackshear/Soares normali... 28 4.2
gb|AI520931.1|AI520931 to68f01.x1 NCI_CGAP_Gas4 Homo sapien... 21 4.2
dbj|BB593214.1|BB593214 BB593214 RIKEN full-length enriched... 25 4.2
gb|AW169624.1|AW169624 xj30a01.x1 NCI_CGAP_Ut2 Homo sapiens... 28 4.4
gb|BI284900.1|BI284900 UI-R-CX0s-cct-f-02-0-UI.s1 UI-R-CX0s... 26 4.4
gb|R21870.1|R21870 yh22b11.r1 Soares placenta Nb2HP Homo sa... 28 4.4
gb|AW088037.1|AW088037 xc87f01.x1 NCI_CGAP_Brn35 Homo sapie... 22 4.4
gb|AI610756.1|AI610756 tp38a03.x1 NCI_CGAP_Ut4 Homo sapiens... 20 4.5
gb|BG376723.1|BG376723 UI-R-CU0-buv-b-12-0-UI.s1 UI-R-CU0 R... 25 4.5
gb|BE421885.1|BE421885 HWM016cA.11r ITEC HWM Barley Leaf Li... 24 4.5
gb|AW551856.1|AW551856 L0204F10-3 NIA Mouse Newborn Ovary c... 24 4.5
gb|AW687245.2|AW687245 NF007E09RT1F1070 Developing root Med... 25 4.6
dbj|AV720538.1|AV720538 AV720538 GLC Homo sapiens cDNA clon... 29 4.6
gb|BF302757.1|BF302757 602032632F1 NCI_CGAP_SG2 Mus musculu... 24 4.6
gb|AW074638.1|AW074638 xa89d09.x1 NCI_CGAP_Co17 Homo sapien... 26 4.7
gb|BG782460.1|BG782460 SEAUMC002417 Sea urchin primary mese... 32 4.8
gb|BI295870.1|BI295870 UI-R-DK0-cfb-g-01-0-UI.s1 UI-R-DK0 R... 32 4.8
gb|BG026781.1|BG026781 602294246F1 NIH_MGC_86 Homo sapiens ... 32 4.8
gb|AI469805.1|AI469805 tm15f11.x1 NCI_CGAP_Co14 Homo sapien... 32 4.8
gb|BF982754.1|BF982754 602304967F1 NIH_MGC_88 Homo sapiens ... 32 4.8
gb|AI866994.1|AI866994 wn14b07.x1 NCI_CGAP_Gas4 Homo sapien... 32 4.8
gb|BG460453.1|BG460453 RST42865 Athersys RAGE Library Homo ... 32 4.8
gb|BE420962.1|BE420962 HWM004.D03 ITEC HWM Barley Leaf Libr... 32 4.8
gb|R12543.1|R12543 yf56d12.r1 Soares infant brain 1NIB Homo... 32 4.8
gb|AW080205.1|AW080205 xe49h07.x1 NCI_CGAP_Ut3 Homo sapiens... 20 4.8
gb|BG060885.1|BG060885 L0909H11-3 NIA Mouse Newborn Kidney ... 24 5.0
gb|BF078314.1|BF078314 228545 MARC 2PIG Sus scrofa cDNA 5'. 25 5.2
gb|BF713572.1|BF713572 MI-P-O2-adx-a-08-1-UM.s1 MI-P-O2 Sus... 21 5.3
gb|AW118457.1|AW118457 xe77g04.x1 NCI_CGAP_Brn35 Homo sapie... 25 5.3
gb|BE482654.1|BE482654 168506 BARC 5BOV Bos taurus cDNA 5'. 19 5.3
gb|AI049787.1|AI049787 an33f07.x1 Gessler Wilms tumor Homo ... 21 5.4
gb|BG035330.1|BG035330 602324957F1 NIH_MGC_90 Homo sapiens ... 24 5.4
dbj|BB376219.1|BB376219 BB376219 RIKEN full-length enriched... 26 5.6
gb|BE795406.1|BE795406 601592954F1 NIH_MGC_7 Homo sapiens c... 26 5.6
gb|AI587153.1|AI587153 tr54a01.x1 NCI_CGAP_Pan1 Homo sapien... 21 5.6
gb|AW543815.1|AW543815 C0174D09-3 NIA Mouse E7.5 Extraembry... 22 5.6
gb|BF036183.1|BF036183 601458251F1 NIH_MGC_66 Homo sapiens ... 29 5.6
gb|BF130782.1|BF130782 601818433F1 NIH_MGC_58 Homo sapiens ... 24 5.6
gb|AW170663.1|AW170663 xi79h09.x1 NCI_CGAP_Mel3 Homo sapien... 25 5.6
gb|AA752847.1|AA752847 97AS0515 Rice Immature Seed Lambda Z... 22 5.6
gb|BG690492.1|BG690492 339059 BARC 5BOV Bos taurus cDNA 5'. 27 5.7
gb|BF469589.1|BF469589 UI-M-BH3-auo-b-09-0-UI.r1 NIH_BMAP_M... 24 5.7
gb|BE234864.1|BE234864 142125 MARC 1PIG Sus scrofa cDNA 5'. 23 5.8
gb|AI690687.1|AI690687 tx88a11.x1 NCI_CGAP_Ut4 Homo sapiens... 22 5.8
gb|AI983722.1|AI983722 wz34d07.x1 NCI_CGAP_Brn53 Homo sapie... 25 5.8
gb|AW657298.1|AW657298 110061 MARC 1BOV Bos taurus cDNA 5'. 27 5.8
gb|AW658564.1|AW658564 94666 MARC 1BOV Bos taurus cDNA 5'. 25 5.8
gb|BF395043.1|BF395043 UI-R-CM0-bji-a-06-0-UI.s1 UI-R-CM0 R... 24 5.8
gb|BE477282.1|BE477282 160903 BARC 5BOV Bos taurus cDNA 5'. 27 5.8
gb|BE115837.1|BE115837 UI-R-BS1-axv-d-08-0-UI.s1 UI-R-BS1 R... 24 6.0
gb|BG373548.1|BG373548 UI-R-CV1-bse-b-02-0-UI.s1 UI-R-CV1 R... 21 6.1
gb|AI013793.1|AI013793 EST208468 Normalized rat spleen, Ben... 20 6.2
gb|AI924911.1|AI924911 wn25f04.x1 NCI_CGAP_Gas4 Homo sapien... 21 6.2
dbj|BB599064.1|BB599064 BB599064 RIKEN full-length enriched... 21 6.2
gb|BE682834.1|BE682834 181149 MARC 4BOV Bos taurus cDNA 5'. 27 6.3
gb|AW652950.1|AW652950 101411 MARC 1BOV Bos taurus cDNA 5'. 27 6.3
gb|AI440239.1|AI440239 tj01a06.x1 NCI_CGAP_Gas4 Homo sapien... 27 6.3
gb|AW669649.1|AW669649 113128 MARC 1BOV Bos taurus cDNA 5'. 27 6.4
gb|AI414890.1|AI414890 mb53h09.x1 Soares mouse p3NMF19.5 Mu... 20 6.4
gb|AW555595.1|AW555595 L0256F10-3 NIA Mouse Newborn Ovary c... 24 6.4
gb|AI829842.1|AI829842 wj84h09.x1 NCI_CGAP_Lym12 Homo sapie... 24 6.5
gb|AW102798.1|AW102798 xd38c08.x1 NCI_CGAP_Ov23 Homo sapien... 25 6.5
gb|AW536920.1|AW536920 G0110D03-3 NIA Mouse E7.5 Embryonic ... 26 6.5
gb|BF528989.1|BF528989 602042107F1 NCI_CGAP_Brn67 Homo sapi... 32 6.5
gb|AI376748.1|AI376748 tc35h06.x1 Soares_total_fetus_Nb2HF8... 32 6.5
gb|N95812.1|N95812 zb66c03.s1 Soares_fetal_lung_NbHL19W Hom... 32 6.5
gb|BE737187.1|BE737187 601305255F1 NIH_MGC_39 Homo sapiens ... 32 6.5
gb|AW143322.1|AW143322 EST293618 Normalized rat brain, Bent... 32 6.5
gb|BG810270.1|BG810270 mgct003xm05f Magnaporthe grisea Appr... 32 6.5
gb|BE959497.2|BE959497 601654437R1 NIH_MGC_57 Homo sapiens ... 32 6.5
gb|AA838653.1|AA838653 oe38g09.s1 NCI_CGAP_Pr25 Homo sapien... 32 6.5
gb|AA079525.1|AA079525 zm97d06.s1 Stratagene colon HT29 (#9... 32 6.5
gb|AI076502.1|AI076502 oz28d10.x1 Soares_total_fetus_Nb2HF8... 21 6.5
gb|BG784595.1|BG784595 SEAUMC004552 Sea urchin primary mese... 26 6.5
gb|BG623917.1|BG623917 602649073F1 NIH_MGC_79 Homo sapiens ... 24 6.7
gb|BE898244.1|BE898244 601681011F1 NIH_MGC_9 Homo sapiens c... 26 6.7
gb|AW148303.1|AW148303 xf12b05.x1 NCI_CGAP_Kid8 Homo sapien... 22 6.8
>gb|BF600425.1|BF600425 265030 MARC 3BOV Bos taurus cDNA 5'.
Length = 389
Score = 27.6 bits (54), Expect(3) = 5e-04
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3 / +2
Query: 126 NKTSPGGPLKTQFPPPWG 179
N +P PL PPPWG
Sbjct: 194 NPLAPPTPLFFFSPPPWG 247
Score = 22.6 bits (43), Expect(3) = 5e-04
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1 / +1
Query: 19 VLKRPLNPFQIFFFF 63
VL R PF FFFF
Sbjct: 1 VLDRERRPFFFFFFF 45
Score = 22.1 bits (42), Expect(3) = 5e-04
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +3 / +1
Query: 165 PPPWGPYF 188
PPPWG F
Sbjct: 250 PPPWGEKF 273
>gb|AI376180.1|AI376180 ta59g09.x1 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone
IMAGE:2048416 3' similar to contains element MSR1
repetitive element ;.
Length = 419
Score = 33.6 bits (67), Expect(2) = 0.038
Identities = 10/16 (62%), Positives = 12/16 (74%)
Frame = +3 / +2
Query: 135 SPGGPLKTQFPPPWGP 182
+PGGP + PPPWGP
Sbjct: 302 TPGGPTGVEPPPPWGP 349
Score = 27.2 bits (53), Expect(3) = 0.84
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 181 GPQGGGNWVFKGPPG 137
GPQGGG GPPG
Sbjct: 348 GPQGGGGSTPVGPPG 304
Score = 19.8 bits (37), Expect(2) = 0.038
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +2
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 62 FFFFFFFL 85
Score = 17.6 bits (32), Expect(3) = 0.84
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1 / -1
Query: 67 PKKKK 53
PKKKK
Sbjct: 86 PKKKK 72
Score = 16.2 bits (29), Expect(3) = 0.84
Identities = 4/9 (44%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 144 PRGRFYSQR 118
P+G F+S++
Sbjct: 143 PKGDFFSKK 117
>gb|AI500588.1|AI500588 tn93c05.x1 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGE:2177096 3'
similar to contains MER28.b2 MSR1 repetitive element ;.
Length = 336
Score = 24.4 bits (47), Expect(3) = 0.039
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3 / -3
Query: 135 SPGGPLKTQFPPPW 176
+P GP PPPW
Sbjct: 307 APQGPGGGLLPPPW 266
Score = 22.1 bits (42), Expect(3) = 0.039
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = +3 / -1
Query: 168 PPWGPYF 188
PPWG F
Sbjct: 210 PPWGWAF 190
Score = 18.5 bits (34), Expect(3) = 0.039
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / -2
Query: 52 FFFFL 66
FFFFL
Sbjct: 332 FFFFL 318
>gb|AA969375.1|AA969375 on58e04.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone
IMAGE:1560894 3' similar to contains element MSR1
repetitive element ;.
Length = 391
Score = 23.1 bits (44), Expect(3) = 0.040
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / -2
Query: 3 PPKNFGFK 26
PPKNF FK
Sbjct: 264 PPKNFFFK 241
Score = 21.7 bits (41), Expect(3) = 0.040
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +3 / -1
Query: 165 PPPWGPY 185
PPPWG +
Sbjct: 100 PPPWGVF 80
Score = 20.8 bits (39), Expect(3) = 0.040
Identities = 6/7 (85%), Positives = 7/7 (99%)
Frame = +1 / -1
Query: 43 FQIFFFF 63
F+IFFFF
Sbjct: 151 FRIFFFF 131
>gb|AI696809.1|AI696809 wc74b11.x1 NCI_CGAP_Pan1 Homo sapiens cDNA clone IMAGE:2324349 3'
similar to TR:Q64371 Q64371 PR-VBETA1. ;contains element
MSR1 repetitive element ;.
Length = 424
Score = 21.7 bits (41), Expect(4) = 0.045
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +3 / -1
Query: 165 PPPWGPY 185
PPPWG +
Sbjct: 139 PPPWGKF 119
Score = 18.5 bits (34), Expect(4) = 0.045
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +3 / -1
Query: 141 GGPLKTQFPP 170
GGPL PP
Sbjct: 193 GGPLFFFSPP 164
Score = 18.5 bits (34), Expect(4) = 0.045
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / -1
Query: 52 FFFFL 66
FFFFL
Sbjct: 328 FFFFL 314
Score = 18.0 bits (33), Expect(4) = 0.045
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2 / -2
Query: 14 FWF*KGPLIP 43
F+F KGP +P
Sbjct: 387 FFFFKGPPLP 358
>gb|BG609384.1|BG609384 323212 MARC 1PIG Sus scrofa cDNA 5'.
Length = 438
Score = 23.5 bits (45), Expect(3) = 0.050
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3 / +2
Query: 165 PPPWGPYF 188
P PWGP+F
Sbjct: 140 PGPWGPFF 163
Score = 22.1 bits (42), Expect(3) = 0.050
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3 / +1
Query: 120 FGNKTSPGGPLKTQFPP 170
FGNK LK QFPP
Sbjct: 58 FGNKK*NPYLLKNQFPP 108
Score = 19.8 bits (37), Expect(3) = 0.050
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1 / +1
Query: 19 VLKRPLNPFQIFF 57
VL R PF FF
Sbjct: 1 VLDRERRPFFFFF 39
>gb|AW539629.1|AW539629 C0122D06-3 NIA Mouse E7.5 Extraembryonic Portion cDNA Library Mus
musculus cDNA clone C0122D06 3'.
Length = 386
Score = 23.5 bits (45), Expect(3) = 0.053
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3 / -1
Query: 120 FGNKTSPGGPLKTQFPPP 173
FG PGGPL F PP
Sbjct: 164 FGPFWGPGGPLWVFFFPP 111
Score = 22.6 bits (43), Expect(3) = 0.053
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +3 / -1
Query: 165 PPPWGPYF 188
PPPWG F
Sbjct: 113 PPPWGSLF 90
Score = 18.9 bits (35), Expect(3) = 0.053
Identities = 5/7 (71%), Positives = 7/7 (99%)
Frame = +2 / -3
Query: 20 F*KGPLI 40
F*+GPL+
Sbjct: 240 F*RGPLL 220
>gb|AI954183.1|AI954183 wx80g05.x1 NCI_CGAP_Ov38 Homo sapiens cDNA clone IMAGE:2550008 3'
similar to contains element MER22 repetitive element ;.
Length = 434
Score = 23.5 bits (45), Expect(3) = 0.067
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +3 / -1
Query: 165 PPPWGPYFW 191
PPPWG +++
Sbjct: 224 PPPWGGFYF 198
Score = 21.2 bits (40), Expect(3) = 0.067
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1 / -1
Query: 31 PLNPFQIFF 57
PL PF+ FF
Sbjct: 293 PLFPFKFFF 267
Score = 20.3 bits (38), Expect(3) = 0.067
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2 / -1
Query: 5 PKKFWF*KGPLIP 43
P FW GPL P
Sbjct: 368 PPPFWGGPGPLFP 330
>gb|AI797929.1|AI797929 we83b03.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone
IMAGE:2347661 3'.
Length = 224
Score = 23.1 bits (44), Expect(3) = 0.095
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 79 PLECPKKKKK 50
PL C KKKKK
Sbjct: 39 PLSCEKKKKK 10
Score = 20.3 bits (38), Expect(3) = 0.095
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2 / -3
Query: 195 GSKNKGPKG 169
G+ KGP+G
Sbjct: 201 GAAGKGPRG 175
Score = 18.9 bits (35), Expect(3) = 0.095
Identities = 6/15 (40%), Positives = 7/15 (46%)
Frame = -1 / -3
Query: 169 GGNWVFKGPPGEVLF 125
GG WVF +F
Sbjct: 177 GGLWVFDPGDVAAIF 133
>gb|BF191117.1|BF191117 237841 MARC 2PIG Sus scrofa cDNA 5'.
Length = 500
Score = 25.3 bits (49), Expect(3) = 0.12
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3 / +3
Query: 123 GNKTSPGGPLKTQFPPPW 176
G P G FPPPW
Sbjct: 189 GGGNPPRGDFFFFFPPPW 242
Score = 21.7 bits (41), Expect(3) = 0.12
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = +1 / +2
Query: 4 PQKILVLKRPLNPFQIFFFFL 66
P I ++KRP FFFFL
Sbjct: 95 PPPIFLVKRPP*KRPPFFFFL 157
Score = 17.6 bits (32), Expect(3) = 0.12
Identities = 4/8 (50%), Positives = 5/8 (62%)
Frame = +3 / +2
Query: 165 PPPWGPYF 188
PPP +F
Sbjct: 395 PPPLFFFF 418
>gb|AI362888.1|AI362888 qy81a01.x1 NCI_CGAP_Brn25 Homo sapiens cDNA clone IMAGE:2018376 3'
similar to SW:UBCE_HUMAN Q16763 UBIQUITIN-CONJUGATING
ENZYME E2-24 KD ;.
Length = 286
Score = 25.3 bits (49), Expect(3) = 0.12
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = +2 / +2
Query: 152 KNPISPPLGPLF 187
K+P+ PP GPLF
Sbjct: 188 KSPLQPPEGPLF 223
Score = 19.8 bits (37), Expect(3) = 0.12
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +3
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 21 FFFFFFFL 44
Score = 17.6 bits (32), Expect(3) = 0.12
Identities = 6/17 (35%), Positives = 7/17 (40%)
Frame = +3 / +3
Query: 120 FGNKTSPGGPLKTQFPP 170
F KT+PG P
Sbjct: 57 FFKKTNPGPRAPCPLPD 107
>gb|AI419417.1|AI419417 tf28d03.x1 NCI_CGAP_Brn23 Homo sapiens cDNA clone IMAGE:2097509 3'
similar to contains MER22.t3 MSR1 repetitive element ;.
Length = 275
Score = 24.9 bits (48), Expect(3) = 0.15
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3 / +2
Query: 120 FGNKTSPGGPLKTQFPPPWG 179
FG G P + FPP WG
Sbjct: 116 FGGGAPGGFPPQKNFPPLWG 175
Score = 19.8 bits (37), Expect(3) = 0.15
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +3
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 57 FFFFFFFL 80
Score = 17.6 bits (32), Expect(3) = 0.15
Identities = 4/8 (50%), Positives = 5/8 (62%)
Frame = +3 / +1
Query: 165 PPPWGPYF 188
PPP +F
Sbjct: 199 PPPPPLFF 222
>gb|AW188491.1|AW188491 xj99e08.x1 NCI_CGAP_Co18 Homo sapiens cDNA clone IMAGE:2665382 3'
similar to contains MER22.b2 MSR1 repetitive element ;.
Length = 367
Score = 24.4 bits (47), Expect(3) = 0.15
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3 / +3
Query: 129 KTSPGGPLKTQFPP 170
K PGGP K PP
Sbjct: 150 KKKPGGPPKIPPPP 191
Score = 19.8 bits (37), Expect(3) = 0.15
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +1
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 73 FFFFFFFL 96
Score = 18.9 bits (35), Expect(3) = 0.15
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2 / +1
Query: 164 SPPLGPLF 187
+PP GPLF
Sbjct: 214 APPPGPLF 237
>dbj|AV700522.1|AV700522 AV700522 GKC Homo sapiens cDNA clone GKCEFA01 3'.
Length = 739
Score = 24.9 bits (48), Expect(3) = 1.0
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = +3 / -3
Query: 144 GPLKTQFPP 170
GPLKT+FPP
Sbjct: 419 GPLKTKFPP 393
Score = 24.4 bits (47), Expect(3) = 0.18
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / +3
Query: 41 GLRGLFKTKIFWG 3
GL+G+F K FWG
Sbjct: 606 GLKGVFGKKNFWG 644
Score = 23.1 bits (44), Expect(3) = 0.18
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 169 GGNWVFKGP 143
GGN VFKGP
Sbjct: 394 GGNLVFKGP 420
Score = 19.4 bits (36), Expect(3) = 1.0
Identities = 7/13 (53%), Positives = 9/13 (68%)
Frame = +2 / -1
Query: 5 PKKFWF*KGPLIP 43
P+KF+F K P P
Sbjct: 643 PQKFFFPKTPFKP 605
Score = 18.0 bits (33), Expect(3) = 1.0
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +3 / -3
Query: 165 PPPWGPYFWI 194
PPP+ YF++
Sbjct: 179 PPPFLKYFFL 150
Score = 17.6 bits (32), Expect(3) = 0.18
Identities = 4/6 (66%), Positives = 6/6 (99%)
Frame = -1 / +2
Query: 67 PKKKKK 50
P+KKK+
Sbjct: 563 PRKKKR 580
>gb|BE561969.1|BE561969 601346701F1 NIH_MGC_8 Homo sapiens cDNA clone IMAGE:3687433 5'.
Length = 1039
Score = 34.5 bits (69), Expect(2) = 0.23
Identities = 10/19 (52%), Positives = 12/19 (62%)
Frame = +3 / -2
Query: 138 PGGPLKTQFPPPWGPYFWI 194
P GP T +P PW P FW+
Sbjct: 525 PAGPQPTTWPDPWPPIFWL 469
Score = 17.6 bits (32), Expect(2) = 0.23
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1 / -2
Query: 4 PQKILVLKRPL 36
P+K L K+PL
Sbjct: 774 PRKYLATKQPL 742
>gb|AW478769.1|AW478769 21616 MARC 2BOV Bos taurus cDNA 5'.
Length = 240
Score = 27.2 bits (53), Expect(2) = 0.24
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 19 VLKRPLNPFQIFFFFLG 69
VL R PF FFFFLG
Sbjct: 2 VLDRERRPFFFFFFFLG 52
Score = 22.6 bits (43), Expect(2) = 0.24
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +3 / +1
Query: 120 FGNKTSPGGPLKTQFPPPWG 179
F GGP + PPWG
Sbjct: 115 FKKPPKKGGPQGVKKGPPWG 174
>gb|AI744768.1|AI744768 tr14e10.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:2218314 3'
similar to contains MER22.t3 TAR1 repetitive element ;.
Length = 308
Score = 24.9 bits (48), Expect(3) = 0.25
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +3 / +1
Query: 126 NKTSPGGPLKTQFPP 170
N GGP KT+ PP
Sbjct: 103 NPQRGGGPKKTKTPP 147
Score = 19.8 bits (37), Expect(3) = 0.25
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +2
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 62 FFFFFFFL 85
Score = 17.1 bits (31), Expect(3) = 0.25
Identities = 4/4 (100%), Positives = 4/4 (100%)
Frame = +3 / +3
Query: 168 PPWG 179
PPWG
Sbjct: 189 PPWG 200
>gb|BE991965.1|BE991965 UI-M-BZ1-beb-e-03-0-UI.s1 NIH_BMAP_MHI2_S1 Mus musculus cDNA clone
UI-M-BZ1-beb-e-03-0-UI 3'.
Length = 492
Score = 20.3 bits (38), Expect(4) = 0.28
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +3 / -2
Query: 165 PPPWG 179
PPPWG
Sbjct: 74 PPPWG 60
Score = 19.8 bits (37), Expect(4) = 0.28
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / -3
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 412 FSRFFFFL 389
Score = 17.6 bits (32), Expect(4) = 0.28
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / -3
Query: 20 F*KGPLIP 43
F*KGPL P
Sbjct: 490 F*KGPLGP 467
Score = 16.6 bits (30), Expect(4) = 0.28
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = +3 / -3
Query: 144 GPLKTQFP 167
GPL FP
Sbjct: 325 GPLLGIFP 302
>gb|AI571861.1|AI571861 to20d01.x1 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGE:2179585 3'
similar to contains MER22.t3 MER22 repetitive element ;.
Length = 283
Score = 32.7 bits (65), Expect(2) = 0.28
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = +3 / -1
Query: 165 PPPWGPYFW 191
PPPWGP+FW
Sbjct: 181 PPPWGPFFW 155
Score = 17.1 bits (31), Expect(2) = 0.28
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = +3 / -1
Query: 3 PPKNFG 20
PPK FG
Sbjct: 247 PPKGFG 230
>gb|BI274531.1|BI274531 UI-R-CW0-bwj-h-09-0-UI.s1 UI-R-CW0 Rattus norvegicus cDNA clone
UI-R-CW0-bwj-h-09-0-UI 3'.
Length = 434
Score = 26.3 bits (51), Expect(3) = 0.28
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1 / -3
Query: 178 PQGGGNWVFKGP 143
P GG +WV GP
Sbjct: 165 PGGGASWVLGGP 130
Score = 18.9 bits (35), Expect(3) = 0.28
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / -2
Query: 38 LRGLFKTKIFWG 3
L GLF FWG
Sbjct: 115 LGGLFLGGFFWG 80
Score = 17.6 bits (32), Expect(3) = 0.28
Identities = 4/5 (80%), Positives = 5/5 (100%)
Frame = -2 / -1
Query: 183 KGPKG 169
KGP+G
Sbjct: 173 KGPRG 159
>gb|AI712788.1|AI712788 UI-R-AF1-aax-e-07-0-UI.s1 UI-R-AF1 Rattus norvegicus cDNA clone
UI-R-AF1-aax-e-07-0-UI 3'.
Length = 194
Score = 22.1 bits (42), Expect(3) = 0.29
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -2
Query: 3 PPKNFGFKKAP 35
PPKN FKK P
Sbjct: 121 PPKNPPFKKGP 89
Score = 21.2 bits (40), Expect(3) = 0.29
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / -1
Query: 40 PFQIFFFF 63
PF++FFFF
Sbjct: 86 PFEMFFFF 63
Score = 16.6 bits (30), Expect(3) = 0.29
Identities = 3/5 (60%), Positives = 5/5 (100%)
Frame = +2 / -1
Query: 170 PLGPL 184
P+GP+
Sbjct: 56 PIGPI 42
>dbj|AV720130.1|AV720130 AV720130 GLC Homo sapiens cDNA clone GLCATC10 5'.
Length = 460
Score = 23.5 bits (45), Expect(3) = 0.32
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = +3 / -1
Query: 171 PWGPYF 188
PWGP F
Sbjct: 253 PWGPGF 236
Score = 22.6 bits (43), Expect(3) = 2.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / +2
Query: 166 GNWVFKGPPG 137
G WV K PPG
Sbjct: 344 GCWVLKNPPG 373
Score = 20.8 bits (39), Expect(3) = 0.32
Identities = 8/13 (61%), Positives = 9/13 (68%)
Frame = +3 / -2
Query: 129 KTSPGGPLKTQFP 167
K+ PGG KTQ P
Sbjct: 381 KSPPGGFFKTQQP 343
Score = 19.4 bits (36), Expect(3) = 2.4
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = -2 / +1
Query: 195 GSKNKGPK 172
G N+GPK
Sbjct: 25 GGLNRGPK 48
Score = 18.5 bits (34), Expect(3) = 0.32
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / -2
Query: 52 FFFFL 66
FFFFL
Sbjct: 459 FFFFL 445
Score = 17.6 bits (32), Expect(3) = 2.4
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1 / +2
Query: 67 PKKKK 53
PKKKK
Sbjct: 443 PKKKK 457
>gb|AW839377.1|AW839377 RC0-LT0070-210100-012-a06 LT0070 Homo sapiens cDNA.
Length = 239
Score = 30.8 bits (61), Expect(2) = 0.32
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / +2
Query: 132 TSPGGPLKTQFPPPWG 179
T PGGP T PP WG
Sbjct: 131 TQPGGPFPTLSPPAWG 178
Score = 18.5 bits (34), Expect(2) = 0.32
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / +2
Query: 52 FFFFL 66
FFFFL
Sbjct: 47 FFFFL 61
>gb|AW082594.1|AW082594 xc20b03.x1 NCI_CGAP_Co19 Homo sapiens cDNA clone IMAGE:2584781 3'.
Length = 209
Score = 24.0 bits (46), Expect(3) = 0.35
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +3 / +1
Query: 165 PPPWGPYF 188
PP WG +F
Sbjct: 163 PPLWGGFF 186
Score = 19.8 bits (37), Expect(3) = 0.35
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +3
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 69 FFFFFFFL 92
Score = 16.2 bits (29), Expect(3) = 0.35
Identities = 5/11 (45%), Positives = 6/11 (54%)
Frame = +3 / +2
Query: 138 PGGPLKTQFPP 170
PGG K + P
Sbjct: 128 PGGGKKGKKKP 160
>gb|AI289629.1|AI289629 qw29c06.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:1992490 3'
similar to contains PTR5.b2 MSR1 repetitive element ;.
Length = 278
Score = 29.5 bits (58), Expect(2) = 0.38
Identities = 10/18 (55%), Positives = 11/18 (60%)
Frame = +3 / +1
Query: 138 PGGPLKTQFPPPWGPYFW 191
P P K + PPWGP FW
Sbjct: 199 PPPPGKGKKTPPWGPPFW 252
Score = 19.8 bits (37), Expect(2) = 0.38
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +3
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 69 FFFFFFFL 92
>gb|AW118010.1|AW118010 xe60f01.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone IMAGE:2612281 3'
similar to contains element MSR1 repetitive element ;.
Length = 382
Score = 23.5 bits (45), Expect(3) = 0.39
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3 / -3
Query: 165 PPPWGPYFW 191
PPP P+FW
Sbjct: 176 PPPKAPFFW 150
Score = 19.4 bits (36), Expect(3) = 0.39
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +3 / -1
Query: 3 PPKNFGFK 26
PP+ FGF+
Sbjct: 373 PPRGFGFR 350
Score = 18.9 bits (35), Expect(3) = 0.39
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2 / -1
Query: 137 PRGALKNPISPP 172
P+G L NP+ P
Sbjct: 325 PKGPLLNPLFSP 290
>gb|AW132034.1|AW132034 xe71c11.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone IMAGE:2613332 3'
similar to contains element MER30 repetitive element ;.
Length = 292
Score = 29.0 bits (57), Expect(2) = 0.53
Identities = 10/18 (55%), Positives = 13/18 (71%)
Frame = +3 / +1
Query: 141 GGPLKTQFPPPWGPYFWI 194
GGPLK PPP G +F++
Sbjct: 238 GGPLKKTPPPPLGGFFFL 291
Score = 27.2 bits (53), Expect(2) = 0.40
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 178 PQGGGNWVFKGPP 140
P+GGG FKGPP
Sbjct: 275 PKGGGGVFFKGPP 237
Score = 22.1 bits (42), Expect(2) = 0.40
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1 / -1
Query: 148 GPPGEVLFPKDDXXXXXXXXXXFPLECPKKKK 53
GP G FP PL PKKKK
Sbjct: 193 GPGGGAPFPFFFWGFGGFKKKKGPLGGPKKKK 98
Score = 19.8 bits (37), Expect(2) = 0.53
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +3
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 87 FFFFFFFL 110
>gb|AI591387.1|AI591387 ts10h06.x1 NCI_CGAP_Pan1 Homo sapiens cDNA clone IMAGE:2228219 3'
similar to contains element MSR1 repetitive element ;.
Length = 312
Score = 27.6 bits (54), Expect(2) = 0.43
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = +3 / -2
Query: 120 FGNKTSPGGPLKTQFPPPWGP 182
+G PG +PPPWGP
Sbjct: 212 WGGPPPPGPGFLFFYPPPWGP 150
Score = 21.7 bits (41), Expect(2) = 0.43
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1 / -2
Query: 40 PFQIFFFF 63
PF IFFFF
Sbjct: 248 PFGIFFFF 225
>gb|AW130949.1|AW130949 xe67e12.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone IMAGE:2612974 3'
similar to contains MER22.t3 MSR1 repetitive element ;.
Length = 419
Score = 31.8 bits (63), Expect(2) = 0.43
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1 / -3
Query: 172 GGGNWVFKGPPGEVLFPKDDXXXXXXXXXXFPLECPKKKKK 50
G G + F GPPG LFPK + KKKKK
Sbjct: 141 GPGAFFFLGPPGPPLFPKKKKKKKKKKKKKKKKKKKKKKKK 19
Score = 18.0 bits (33), Expect(2) = 0.43
Identities = 4/5 (80%), Positives = 4/5 (80%)
Frame = -1 / -1
Query: 172 GGGNW 158
GGG W
Sbjct: 350 GGGGW 336
>gb|AW130202.1|AW130202 xf29h07.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2619517 3'.
Length = 244
Score = 27.2 bits (53), Expect(2) = 0.44
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = -1 / -3
Query: 178 PQGGGNWVFKGPPGEVLFP 122
P GNW+F+G PG +P
Sbjct: 158 PWAPGNWLFQGDPGPRPWP 102
Score = 21.7 bits (41), Expect(2) = 0.44
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -2
Query: 70 CPKKKKK 50
CPKKKKK
Sbjct: 48 CPKKKKK 28
>gb|AW541787.1|AW541787 C0149E08-3 NIA Mouse E7.5 Extraembryonic Portion cDNA Library Mus
musculus cDNA clone C0149E08 3'.
Length = 411
Score = 22.6 bits (43), Expect(3) = 0.45
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1 / -1
Query: 178 PQGGGNWVFKGPPG 137
P GG W GPPG
Sbjct: 201 PLVGGGWGGLGPPG 160
Score = 20.8 bits (39), Expect(3) = 0.45
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -1
Query: 34 GAFLKPKFFGG 2
G FLK KFF G
Sbjct: 36 GGFLKKKFFLG 4
Score = 18.5 bits (34), Expect(3) = 0.45
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1 / -3
Query: 148 GPPGEVLFPK 119
GPP V FP+
Sbjct: 124 GPPWGVFFPQ 95
>gb|BF709314.1|BF709314 MI-P-AY0-nah-b-08-0-UI.s1 MI-P-AY0 Sus scrofa cDNA clone
MI-P-AY0-nah-b-08-0-UI 3'.
Length = 280
Score = 21.7 bits (41), Expect(3) = 0.49
Identities = 7/13 (53%), Positives = 8/13 (60%)
Frame = +2 / -2
Query: 137 PRGALKNPISPPL 175
PRG +PI PL
Sbjct: 177 PRGVFFSPIFAPL 139
Score = 20.3 bits (38), Expect(3) = 0.49
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = +3 / -1
Query: 165 PPPWGPYF 188
PPP G F
Sbjct: 67 PPPPGKIF 44
Score = 18.5 bits (34), Expect(3) = 0.49
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / -1
Query: 52 FFFFL 66
FFFFL
Sbjct: 265 FFFFL 251
>gb|AW235035.1|AW235035 xn16g04.x1 NCI_CGAP_Li5 Homo sapiens cDNA clone IMAGE:2693910 3'
similar to contains element MSR1 repetitive element ;.
Length = 389
Score = 29.5 bits (58), Expect(2) = 0.54
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3 / +1
Query: 141 GGPLKTQFPPPWGPYFW 191
GGP K PPP GP W
Sbjct: 319 GGPPKNPPPPPGGPLLW 369
Score = 28.1 bits (55), Expect(2) = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / -1
Query: 196 GIQK*GPQGGGNWVFKGP 143
G K GP GGG F GP
Sbjct: 374 GPHKRGPPGGGGGFFGGP 321
Score = 19.8 bits (37), Expect(2) = 0.54
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +1
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 109 FFFFFFFL 132
Score = 17.6 bits (32), Expect(2) = 6.0
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1 / -1
Query: 67 PKKKK 53
PKKKK
Sbjct: 134 PKKKK 120
>gb|BI007977.1|BI007977 QV3-RT0066-020201-551-e08 RT0066 Homo sapiens cDNA.
Length = 178
Score = 26.7 bits (52), Expect(2) = 0.55
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3 / -3
Query: 120 FGNKTSPGGPLKTQFPPPWG 179
FGNK PG + + PPP G
Sbjct: 143 FGNKRFPGTGVPPRAPPPGG 84
Score = 21.2 bits (40), Expect(2) = 0.55
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +3 / -2
Query: 165 PPPWGPY 185
PPPWG +
Sbjct: 99 PPPWGNH 79
>gb|AW048522.1|AW048522 UI-M-BH1-alx-a-09-0-UI.s1 NIH_BMAP_M_S2 Mus musculus cDNA clone
UI-M-BH1-alx-a-09-0-UI 3'.
Length = 296
Score = 28.1 bits (55), Expect(2) = 0.55
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1 / -3
Query: 172 GGGNWVFKGPPGEVLFPKD 116
GG NW K PPG +F D
Sbjct: 270 GGANWSCKTPPGVAIFLYD 214
Score = 20.8 bits (39), Expect(2) = 0.55
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / -1
Query: 79 PLECPKKKKK 50
P C KKKKK
Sbjct: 32 PASCAKKKKK 3
>gb|AW235489.1|AW235489 xn13b03.x1 NCI_CGAP_Li5 Homo sapiens cDNA clone IMAGE:2693549 3'
similar to contains element MSR1 repetitive element ;.
Length = 414
Score = 29.0 bits (57), Expect(2) = 0.57
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = -1 / -1
Query: 181 GPQGGGNWVFKGPPG 137
GP GGG + F GPPG
Sbjct: 150 GPPGGGFFFFLGPPG 106
Score = 20.3 bits (38), Expect(2) = 0.57
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1 / -2
Query: 79 PLECPKKKK 53
PL PKKKK
Sbjct: 113 PLGGPKKKK 87
>gb|BG064344.1|BG064344 H3018E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3018E03 3'.
Length = 329
Score = 24.4 bits (47), Expect(2) = 0.61
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +2 / -1
Query: 152 KNPISPPLGPLF 187
+ P PPLGPLF
Sbjct: 95 RGPSRPPLGPLF 60
Score = 24.4 bits (47), Expect(2) = 0.61
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1 / -2
Query: 22 LKRPLNPFQIFFFF 63
L RP PF FFFF
Sbjct: 136 LARPQGPFFFFFFF 95
>gb|BE721703.1|BE721703 189311 MARC 2BOV Bos taurus cDNA 5'.
Length = 485
Score = 24.9 bits (48), Expect(3) = 0.63
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 177 PKGGEIGFLRAPRGRFYSQR 118
PKGG G L P G F+S R
Sbjct: 337 PKGGGGGGLPPPGGGFFSPR 278
Score = 19.4 bits (36), Expect(3) = 0.63
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2 / -3
Query: 195 GSKNKGPKGGEI 160
G KGP GG+I
Sbjct: 405 GFPRKGPLGGKI 370
Score = 17.6 bits (32), Expect(3) = 0.63
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = -1 / -3
Query: 28 FLKPKFFG 5
FLK K +G
Sbjct: 240 FLKKKIWG 217
>gb|AI969567.1|AI969567 wz68g06.x1 NCI_CGAP_Mel15 Homo sapiens cDNA clone IMAGE:2563258 3'
similar to contains element PTR5 repetitive element ;.
Length = 623
Score = 25.3 bits (49), Expect(2) = 0.64
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 31 PLNPFQIFFFFLG 69
PLNP +FFFF G
Sbjct: 221 PLNPGGLFFFFKG 259
Score = 24.4 bits (47), Expect(2) = 0.64
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3 / +3
Query: 123 GNKTSPGGPLKTQFPPPWG 179
G +PGGP PPWG
Sbjct: 489 GGGGAPGGPRLKGGLPPWG 545
>gb|AW541496.1|AW541496 C0145H02-3 NIA Mouse E7.5 Extraembryonic Portion cDNA Library Mus
musculus cDNA clone C0145H02 3'.
Length = 426
Score = 24.0 bits (46), Expect(3) = 0.65
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3 / -1
Query: 135 SPGGPLKTQFPPPWGPY 185
+PG L FPP W P+
Sbjct: 279 NPGVGLSVFFPPFWAPW 229
Score = 20.8 bits (39), Expect(3) = 0.65
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3 / -1
Query: 120 FGNKTSPGGP 149
FG SPGGP
Sbjct: 363 FGGPFSPGGP 334
Score = 16.6 bits (30), Expect(3) = 0.65
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +1 / -2
Query: 43 FQIFFFFL 66
F +FF FL
Sbjct: 392 FGLFFPFL 369
>gb|BF170301.1|BF170301 PCL0597 Myeloma (PCL) cDNA library Homo sapiens cDNA.
Length = 207
Score = 25.3 bits (49), Expect(2) = 0.66
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3 / +1
Query: 171 PWGPYFW 191
PWGPY W
Sbjct: 184 PWGPYLW 204
Score = 22.6 bits (43), Expect(2) = 0.66
Identities = 7/13 (53%), Positives = 8/13 (60%)
Frame = +3 / +2
Query: 138 PGGPLKTQFPPPW 176
P GP + PPPW
Sbjct: 53 PVGPNAHKVPPPW 91
>gb|BE642623.1|BE642623 Cri2_6_I24_SP6 Ceratopteris Spore Library Ceratopteris richardii
cDNA clone Cri2_6_I24 5'.
Length = 813
Score = 35.0 bits (70), Expect = 0.71
Identities = 14/23 (60%), Positives = 15/23 (64%)
Frame = +3 / -3
Query: 120 FGNKTSPGGPLKTQFPPPWGPYF 188
+G KTSPGG K FPPP G F
Sbjct: 511 WGKKTSPGGNKKKCFPPPPGKVF 443
Score = 31.8 bits (63), Expect = 6.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / +3
Query: 178 PQGGGNWVFKGPPGEVLFP 122
P GGG F PPGEV FP
Sbjct: 453 PGGGGKHFFLFPPGEVFFP 509
>gb|AI863466.1|AI863466 tz41a08.x1 NCI_CGAP_Brn52 Homo sapiens cDNA clone IMAGE:2291126 3'
similar to contains element MER22 repetitive element ;.
Length = 391
Score = 20.8 bits (39), Expect(3) = 0.73
Identities = 7/17 (41%), Positives = 8/17 (46%)
Frame = +3 / +1
Query: 120 FGNKTSPGGPLKTQFPP 170
FG GGP + PP
Sbjct: 139 FGGGGGGGGPPPPRGPP 189
Score = 20.3 bits (38), Expect(3) = 0.73
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +3 / +2
Query: 165 PPPWG 179
PPPWG
Sbjct: 188 PPPWG 202
Score = 19.8 bits (37), Expect(3) = 0.73
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +2
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 56 FFFFFFFL 79
>gb|AI633402.1|AI633402 to46c11.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2182100 3'
similar to contains element MSR1 repetitive element ;.
Length = 225
Score = 21.2 bits (40), Expect(3) = 0.73
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 43 FQIFFFFLGI 72
F FFFFLG+
Sbjct: 52 FFFFFFFLGV 81
Score = 19.4 bits (36), Expect(3) = 0.73
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +3 / +1
Query: 141 GGPLKTQFPP 170
G PLK PP
Sbjct: 139 GDPLKPPPPP 168
Score = 18.9 bits (35), Expect(3) = 9.7
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = -1 / -3
Query: 178 PQGGGNWVFKGP 143
P GGG GP
Sbjct: 175 PGGGGGGA*GGP 140
Score = 18.5 bits (34), Expect(3) = 9.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1 / -3
Query: 73 ECPKKKK 53
E PKKKK
Sbjct: 82 EPPKKKK 62
Score = 18.5 bits (34), Expect(3) = 0.73
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = +3 / +2
Query: 126 NKTSPG 143
NKT PG
Sbjct: 107 NKTPPG 124
Score = 17.6 bits (32), Expect(3) = 9.7
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -1 / -1
Query: 145 PPGEVL 128
PPG VL
Sbjct: 126 PPGGVL 109
>gb|BF703171.1|BF703171 MI-P-E4-abo-e-03-1-UM.s1 MI-P-E4 Sus scrofa cDNA clone
MI-P-E4-abo-e-03-1-UM 3'.
Length = 397
Score = 24.0 bits (46), Expect(3) = 0.75
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 34 LNPFQIFFFFLG 69
L PF FFFFLG
Sbjct: 232 LPPFSPFFFFLG 197
Score = 20.8 bits (39), Expect(3) = 0.75
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3 / -1
Query: 138 PGGPLKTQFPPP 173
PGG FPPP
Sbjct: 196 PGGGWGPSFPPP 161
Score = 16.2 bits (29), Expect(3) = 0.75
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2 / -2
Query: 5 PKKFWF*KGPLIP 43
P F+F GP+ P
Sbjct: 264 PGFFFFFWGPICP 226
>gb|AI741926.1|AI741926 wg38a01.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone
IMAGE:2367336 3' similar to contains MER22.t1 MSR1
repetitive element ;.
Length = 466
Score = 21.2 bits (40), Expect(3) = 0.77
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3 / +3
Query: 141 GGPLKTQFPP 170
GGP K + PP
Sbjct: 108 GGPPKKKTPP 137
Score = 20.3 bits (38), Expect(3) = 0.77
Identities = 4/4 (100%), Positives = 4/4 (100%)
Frame = +3 / +1
Query: 168 PPWG 179
PPWG
Sbjct: 409 PPWG 420
Score = 19.8 bits (37), Expect(3) = 0.77
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +2
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 56 FFFFFFFL 79
>gb|AI358455.1|AI358455 qx19d12.x1 NCI_CGAP_Lym12 Homo sapiens cDNA clone IMAGE:2001815 3'
similar to contains element MER22 repetitive element ;.
Length = 355
Score = 29.5 bits (58), Expect(2) = 2.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1 / -3
Query: 181 GPQGGGNWVFKGPPGEVLF 125
GP GGG FK PPG F
Sbjct: 296 GPPGGGGGFFKKPPGGPFF 240
Score = 28.6 bits (56), Expect(2) = 0.89
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 129 KTSPGGPLKTQFPPPWGPYFW 191
K PGG LK PPP GP F+
Sbjct: 244 KGPPGGFLKKPPPPPGGPPFF 306
Score = 24.9 bits (48), Expect(2) = 7.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / -1
Query: 138 PGGPLKTQFPPP 173
PGGP FPPP
Sbjct: 127 PGGPYPLGFPPP 92
Score = 20.3 bits (38), Expect(2) = 7.3
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1 / -2
Query: 40 PFQIFFFFL 66
P FFFFL
Sbjct: 171 PLFFFFFFL 145
Score = 19.8 bits (37), Expect(2) = 0.89
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +3
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 69 FFFFFFFL 92
Score = 17.6 bits (32), Expect(2) = 2.2
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1 / -2
Query: 67 PKKKK 53
PKKKK
Sbjct: 93 PKKKK 79
>gb|BE985447.1|BE985447 UI-M-CG0p-bem-f-08-0-UI.s1 NIH_BMAP_Ret4_S2 Mus musculus cDNA
clone UI-M-CG0p-bem-f-08-0-UI 3'.
Length = 375
Score = 24.0 bits (46), Expect(3) = 0.90
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -2
Query: 79 PLECPKKKKK 50
P CPKKKKK
Sbjct: 32 PCPCPKKKKK 3
Score = 19.4 bits (36), Expect(3) = 0.90
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = -1 / -1
Query: 187 K*GPQGGGNWVFKGPPGEVLF 125
K GP+GGG KG G + F
Sbjct: 192 KSGPKGGGPKGKKGGGGGLGF 130
Score = 19.4 bits (36), Expect(3) = 8.9
Identities = 6/14 (42%), Positives = 7/14 (49%)
Frame = +3 / +2
Query: 138 PGGPLKTQFPPPWG 179
P P PPP+G
Sbjct: 143 PPPPFLPFGPPPFG 184
Score = 18.9 bits (35), Expect(3) = 8.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2 / +3
Query: 167 PPLGPLFLDP 196
PPLGP++ P
Sbjct: 174 PPLGPIWNCP 203
Score = 18.5 bits (34), Expect(3) = 8.9
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / +1
Query: 52 FFFFL 66
FFFFL
Sbjct: 4 FFFFL 18
Score = 17.1 bits (31), Expect(3) = 0.90
Identities = 4/8 (50%), Positives = 5/8 (62%)
Frame = -2 / -1
Query: 192 SKNKGPKG 169
+ GPKG
Sbjct: 198 NSKSGPKG 175
>gb|AW084425.1|AW084425 xc58c08.x1 NCI_CGAP_Eso2 Homo sapiens cDNA clone IMAGE:2588462 3'
similar to contains element MSR1 repetitive element ;.
Length = 370
Score = 25.3 bits (49), Expect(2) = 0.93
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3 / -2
Query: 123 GNKTSPGGPLKTQFPPP 173
G KT PGG FPPP
Sbjct: 369 GEKTPPGGKNFFFFPPP 319
Score = 23.1 bits (44), Expect(2) = 0.93
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +3 / -3
Query: 162 FPPPW 176
FPPPW
Sbjct: 257 FPPPW 243
>gb|AW105383.1|AW105383 xd61b07.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:2598229 3'
similar to contains element MSR1 repetitive element ;.
Length = 376
Score = 24.4 bits (47), Expect(2) = 0.95
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3 / +2
Query: 165 PPPWGPYF 188
PPPWG +F
Sbjct: 251 PPPWGGFF 274
Score = 24.0 bits (46), Expect(2) = 0.95
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3 / +1
Query: 123 GNKTSPGGPLKTQFPP 170
G P GPLK + PP
Sbjct: 142 GGGGPPRGPLKKRGPP 189
>gb|AI815237.1|AI815237 wk72g05.x1 NCI_CGAP_Pan1 Homo sapiens cDNA clone IMAGE:2420984 3'
similar to contains TAR1.b2 MSR1 repetitive element ;.
Length = 701
Score = 25.8 bits (50), Expect(2) = 0.97
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 137 PRGALKNPISPPLG 178
P GA +NP+SPP G
Sbjct: 574 PGGAGRNPLSPPKG 615
Score = 23.5 bits (45), Expect(2) = 0.97
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 3 PPKNFGFKK 29
PPKNFGF K
Sbjct: 259 PPKNFGFFK 285
>gb|AW951122.1|AW951122 EST363192 MAGE resequences, MAGA Homo sapiens cDNA.
Length = 464
Score = 22.1 bits (42), Expect(3) = 1.0
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +3 / -1
Query: 165 PPPWGPYF 188
PPPWG F
Sbjct: 59 PPPWGQKF 36
Score = 19.8 bits (37), Expect(3) = 1.0
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +3 / -2
Query: 138 PGGPLKTQFPP 170
PGGP + PP
Sbjct: 127 PGGPPRGFPPP 95
Score = 18.9 bits (35), Expect(3) = 1.0
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +1 / -1
Query: 40 PFQIFFF 60
P Q+FFF
Sbjct: 455 PPQVFFF 435
>gb|AI439020.1|AI439020 tc89e05.x1 NCI_CGAP_CLL1 Homo sapiens cDNA clone IMAGE:2073344 3'
similar to contains TAR1.b2 TAR1 repetitive element ;.
Length = 352
Score = 20.3 bits (38), Expect(3) = 1.1
Identities = 4/4 (100%), Positives = 4/4 (100%)
Frame = +3 / +1
Query: 168 PPWG 179
PPWG
Sbjct: 331 PPWG 342
Score = 19.8 bits (37), Expect(3) = 1.1
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +3 / +2
Query: 141 GGPLKTQFPPPW 176
G PL + PP W
Sbjct: 161 GNPLFKKAPPSW 196
Score = 19.8 bits (37), Expect(3) = 1.1
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +2
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 35 FFFFFFFL 58
>gb|BE278777.1|BE278777 601159006F1 NIH_MGC_21 Homo sapiens cDNA clone IMAGE:3505681 5'.
Length = 798
Score = 31.3 bits (62), Expect(2) = 1.1
Identities = 10/17 (58%), Positives = 14/17 (81%)
Frame = +2 / +3
Query: 137 PRGALKNPISPPLGPLF 187
P G + +P++PPLGPLF
Sbjct: 711 PPGGVGSPLAPPLGPLF 761
Score = 18.0 bits (33), Expect(2) = 1.1
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / +1
Query: 28 RPLNPFQI 51
RPL P+QI
Sbjct: 463 RPLGPWQI 486
>gb|AI634682.1|AI634682 wa07h08.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2297439 3'
similar to contains MER22.t1 MER22 repetitive element ;.
Length = 426
Score = 23.5 bits (45), Expect(3) = 1.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 178 PQGGGNWVFKGPP 140
P+GGG+ F GPP
Sbjct: 256 PRGGGHVGFLGPP 218
Score = 19.4 bits (36), Expect(3) = 1.2
Identities = 4/7 (57%), Positives = 6/7 (85%)
Frame = -1 / -3
Query: 145 PPGEVLF 125
PPG++ F
Sbjct: 208 PPGDLFF 188
Score = 17.6 bits (32), Expect(3) = 1.2
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1 / -1
Query: 67 PKKKK 53
PKKKK
Sbjct: 84 PKKKK 70
>gb|AW552177.1|AW552177 L0209D02-3 NIA Mouse Newborn Ovary cDNA Library Mus musculus cDNA
clone L0209D02 3'.
Length = 498
Score = 24.9 bits (48), Expect(3) = 1.2
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 165 PPPWGPYFW 191
PPPWG +F+
Sbjct: 218 PPPWGFFFF 192
Score = 18.5 bits (34), Expect(3) = 1.2
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / -1
Query: 52 FFFFL 66
FFFFL
Sbjct: 444 FFFFL 430
Score = 17.6 bits (32), Expect(3) = 1.2
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +3 / -3
Query: 144 GPLKTQFPP 170
GPL + PP
Sbjct: 358 GPLIFKSPP 332
>gb|AI558302.1|AI558302 fb78d10.x1 Zebrafish WashU MPIMG EST Danio rerio cDNA clone
IMAGE:3718003 3'.
Length = 376
Score = 20.8 bits (39), Expect(3) = 1.2
Identities = 7/16 (43%), Positives = 9/16 (55%)
Frame = +3 / +3
Query: 135 SPGGPLKTQFPPPWGP 182
+PG P + P WGP
Sbjct: 138 APGAPKLGRKPFKWGP 185
Score = 19.8 bits (37), Expect(3) = 1.2
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +1
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 55 FFFFFFFL 78
Score = 19.4 bits (36), Expect(3) = 1.2
Identities = 4/6 (66%), Positives = 4/6 (66%)
Frame = +3 / +2
Query: 171 PWGPYF 188
PWG F
Sbjct: 347 PWGGGF 364
>gb|BE951598.1|BE951598 UI-M-CC0-ayc-e-03-0-UI.s1 NIH_BMAP_Ret1 Mus musculus cDNA clone
UI-M-CC0-ayc-e-03-0-UI 3'.
Length = 503
Score = 21.7 bits (41), Expect(3) = 1.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 129 KTSPGGPLKTQFPP 170
+ +PGGP + Q PP
Sbjct: 374 RKTPGGPKRFQPPP 415
Score = 20.8 bits (39), Expect(3) = 1.2
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +3 / +3
Query: 165 PPPWGPY 185
PPPW P+
Sbjct: 474 PPPWPPH 494
Score = 18.5 bits (34), Expect(3) = 1.2
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / +1
Query: 52 FFFFL 66
FFFFL
Sbjct: 4 FFFFL 18
>gb|BF339171.1|BF339171 602038476F1 NCI_CGAP_Brn64 Homo sapiens cDNA clone IMAGE:4186410
5'.
Length = 1217
Score = 27.2 bits (53), Expect(2) = 1.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1 / +1
Query: 19 VLKRPLNPFQIFFFFLGI 72
VL R PF FFFFLG+
Sbjct: 1 VLDRERPPFFFFFFFLGL 54
Score = 22.6 bits (43), Expect(2) = 1.2
Identities = 5/8 (62%), Positives = 6/8 (74%)
Frame = +3 / +1
Query: 165 PPPWGPYF 188
PPP+ P F
Sbjct: 502 PPPFPPLF 525
>gb|AI922543.1|AI922543 wm89d06.x1 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGE:2443115 3'.
Length = 270
Score = 27.6 bits (54), Expect(2) = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / +1
Query: 153 KTQFPPPWGPYF 188
KT PPP GP F
Sbjct: 91 KTPHPPPQGPPF 126
Score = 19.8 bits (37), Expect(2) = 1.2
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +2
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 29 FFFFFFFL 52
>gb|AI680463.1|AI680463 tw81f02.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone IMAGE:2266107 3'
similar to contains element MSR1 repetitive element ;.
Length = 279
Score = 28.1 bits (55), Expect(2) = 1.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3 / -1
Query: 141 GGPLKTQFPPPWGPYFW 191
GGP FPP GP FW
Sbjct: 138 GGPFFLFFPPKIGPPFW 88
Score = 19.4 bits (36), Expect(2) = 1.3
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +1 / -1
Query: 46 QIFFFFL 66
Q +FFFL
Sbjct: 228 QFYFFFL 208
>gb|AW019662.1|AW019662 fd55c10.x1 Zebrafish WashU MPIMG EST Danio rerio cDNA clone
IMAGE:3733650 3'.
Length = 217
Score = 24.4 bits (47), Expect(2) = 1.3
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -3
Query: 40 PFQIFFFFLGI 72
PF FFFFLG+
Sbjct: 215 PFFFFFFFLGV 183
Score = 22.6 bits (43), Expect(2) = 1.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / -3
Query: 129 KTSPGGPLKTQF 164
K SPG LK QF
Sbjct: 74 KMSPGASLK*QF 39
>gb|BF458213.1|BF458213 UI-M-BZ1-blm-b-08-0-UI.s1 NIH_BMAP_MHI2_S1 Mus musculus cDNA clone
UI-M-BZ1-blm-b-08-0-UI 3'.
Length = 378
Score = 28.6 bits (56), Expect(2) = 1.3
Identities = 10/19 (52%), Positives = 12/19 (62%)
Frame = +3 / -2
Query: 120 FGNKTSPGGPLKTQFPPPW 176
FG +P GPL FPPP+
Sbjct: 125 FGEFLAPWGPLLKSFPPPF 69
Score = 19.4 bits (36), Expect(2) = 1.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1 / -1
Query: 37 NPFQIFFFFL 66
NP FFFFL
Sbjct: 192 NPLGEFFFFL 163
>gb|AI690751.1|AI690751 tx88h11.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2276709 3'
similar to contains element MSR1 repetitive element ;.
Length = 391
Score = 26.3 bits (51), Expect(2) = 4.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3 / +1
Query: 123 GNKTSPGGPLKTQFPPPWG 179
G K P K PPPWG
Sbjct: 256 GKKGGKTPPKKGGPPPPWG 312
Score = 22.6 bits (43), Expect(3) = 1.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1 / -3
Query: 181 GPQGGGNWVFKGPPGEVLFP 122
GPQGGG F G FP
Sbjct: 314 GPQGGGGPPFLGGVFPPFFP 255
Score = 21.2 bits (40), Expect(3) = 1.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1 / -1
Query: 79 PLECPKKKK 53
PL PKKKK
Sbjct: 154 PLVSPKKKK 128
Score = 19.8 bits (37), Expect(2) = 4.4
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +1
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 118 FFFFFFFL 141
Score = 16.2 bits (29), Expect(3) = 1.3
Identities = 3/5 (60%), Positives = 5/5 (100%)
Frame = -2 / -1
Query: 183 KGPKG 169
+GP+G
Sbjct: 316 RGPRG 302
>gb|AI354630.1|AI354630 qu95b05.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGE:1979793 3'
similar to contains element MER22 repetitive element ;.
Length = 292
Score = 29.0 bits (57), Expect(2) = 1.3
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = +3 / -2
Query: 141 GGPLKTQFPPPWGPYFW 191
G PL PP W P+FW
Sbjct: 243 GPPLGPPPPPVWAPFFW 193
Score = 18.5 bits (34), Expect(2) = 1.3
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / -1
Query: 52 FFFFL 66
FFFFL
Sbjct: 259 FFFFL 245
>gb|AI439256.1|AI439256 ti59b11.x1 NCI_CGAP_Lym12 Homo sapiens cDNA clone IMAGE:2134749 3'
similar to contains MSR1.t1 MSR1 repetitive element ;.
Length = 389
Score = 28.1 bits (55), Expect(2) = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3 / +1
Query: 123 GNKTSPGGPLKTQFPPPWGP 182
G +PGGP K + PPP+ P
Sbjct: 307 GGPKNPGGPPKKKKPPPFLP 366
Score = 19.8 bits (37), Expect(2) = 1.3
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +2
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 74 FFFFFFFL 97
>gb|BF623018.1|BF623018 HVSMEa0012K08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare cDNA clone
HVSMEa0012K08f.
Length = 827
Score = 34.1 bits (68), Expect = 1.3
Identities = 11/17 (64%), Positives = 12/17 (69%)
Frame = +3 / -2
Query: 138 PGGPLKTQFPPPWGPYF 188
PGGP+ Q PPWGP F
Sbjct: 280 PGGPILFQTAPPWGPAF 230
Score = 28.6 bits (56), Expect(2) = 2.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / +3
Query: 187 K*GPQGGGNWVFKGPPG 137
K GPQGG W GPPG
Sbjct: 231 KAGPQGGAVWNKIGPPG 281
Score = 19.4 bits (36), Expect(2) = 2.8
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2 / +3
Query: 144 PRGRFYSQRTI 112
PRG+ QRT+
Sbjct: 513 PRGKLLGQRTL 545
>gb|AI624084.1|AI624084 ts41f06.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2231171 3'
similar to TR:Q04154 Q04154 SALIVARY PROLINE-RICH
PROTEIN RP15 PRECURSOR. ;contains MER22.b3 MSR1
repetitive element ;.
Length = 357
Score = 34.1 bits (68), Expect = 1.3
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = +3 / -2
Query: 138 PGGPLKTQFPPPWGP 182
PGG LK + PPPWGP
Sbjct: 179 PGGGLKKRGPPPWGP 135
>gb|AI305189.1|AI305189 ql90b08.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1879575
3' similar to TR:Q24035 Q24035 ENA POLYPEPTIDE.
;contains element MSR1 repetitive element ;.
Length = 397
Score = 28.1 bits (55), Expect(2) = 1.4
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +3 / +1
Query: 120 FGNKTSPGGPLKTQFPP 170
F NK PGGP +T PP
Sbjct: 304 FLNKKRPGGPGETPPPP 354
Score = 19.8 bits (37), Expect(2) = 1.4
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1 / +1
Query: 43 FQIFFFFL 66
F FFFFL
Sbjct: 7 FFFFFFFL 30
>gb|AW661687.1|AW661687 ESTPMMC19F Penaeus monodon's abdominal cDNA library Penaeus monodon
cDNA clone PMMC19 3'.
Length = 736
Score = 25.3 bits (49), Expect(2) = 1.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3 / +3
Query: 144 GPLKTQFPPPWGPYF 188
G K PPPW P F
Sbjct: 573 GGXKKNLPPPWPPXF 617
Score = 23.5 bits (45), Expect(2) = 1.4
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = +3 / +3
Query: 3 PPKNFGFK 26
PPKNFGF+
Sbjct: 519 PPKNFGFR 542
>gb|BG429608.1|BG429608 602501289F1 NIH_MGC_75 Homo sapiens cDNA clone IMAGE:4614814 5'.
Length = 540
Score = 26.3 bits (51), Expect(2) = 1.4
Identities = 10/19 (52%), Positives = 13/19 (67%)
Frame = +2 / -2
Query: 137 PRGALKNPISPPLGPLFLD 193
P+GA +N IS LG L +D
Sbjct: 236 PQGAGRNLISSSLGLLLID 180
Score = 22.1 bits (42), Expect(2) = 1.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / -2
Query: 40 PFQIFFFF 63
PF +FFFF
Sbjct: 296 PFLVFFFF 273
>gb|AW632361.1|AW632361 92206 MARC 1BOV Bos taurus cDNA 5'.
Length = 404
Score = 27.2 bits (53), Expect(2) = 1.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3 / -1
Query: 138 PGGPLKTQFPPPWGPYFW 191
P GP+ PP WG + W
Sbjct: 173 PRGPIFLCSPPAWGQFSW 120
Score = 20.8 bits (39), Expect(2) = 1.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1 / -3
Query: 4 PQKILVLKRPLNPFQIFFFF 63
P+KIL P F FFFF
Sbjct: 357 PRKILNPPPPFFFFFFFFFF 298
>gb|AI585907.1|AI585907 vs22h03.x1 Barstead mouse myotubes MPLRB5 Mus musculus cDNA clone
IMAGE:1138997 3'.
Length = 315
Score = 29.9 bits (59), Expect(2) = 1.4
Identities = 14/39 (35%), Positives = 18/39 (45%)
Frame = -1 / -3
Query: 166 GNWVFKGPPGEVLFPKDDXXXXXXXXXXFPLECPKKKKK 50
G +VF PPGE+ F K + + KKKKK
Sbjct: 124 GGFVFPPPPGEIFFKKKNFGFFFPQKKKKKKKKKKKKKK 8
Score = 17.6 bits (32), Expect(2) = 1.4
Identities = 4/5 (80%), Positives = 5/5 (100%)
Frame = -1 / -1
Query: 181 GPQGG 167
GP+GG
Sbjct: 135 GPRGG 121
>gb|AW235482.1|AW235482 xn12e03.x1 NCI_CGAP_Li5 Homo sapiens cDNA clone IMAGE:2693500 3'
similar to contains element MSR1 repetitive element ;.
Length = 363
Score = 18.5 bits (34), Expect(4) = 1.4
Identities = 4/7 (57%), Positives = 6/7 (85%)
Frame = -2 / +1
Query: 189 KNKGPKG 169
K +GP+G
Sbjct: 103 KKRGPRG 123
Score = 17.6 bits (32), Expect(4) = 1.4
Identities = 5/11 (45%), Positives = 6/11 (54%)
Frame = -1 / +1
Query: 175 QGGGNWVFKGP 143
+GGG K P
Sbjct: 199 RGGGGGAPKNP 231
Score = 17.6 bits (32), Expect(4) = 1.4
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1 / +3
Query: 67 PKKKK 53
PKKKK
Sbjct: 291 PKKKK 305
Score = 16.6 bits (30), Expect(4) = 1.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -1 / +3
Query: 148 GPPGEVLFP 122
GPP + FP
Sbjct: 249 GPPQKKTFP 275
>gb|BI287959.1|BI287959 UI-R-CX0s-ccw-c-11-0-UI.s1 UI-R-CX0s Rattus norvegicus cDNA clone
UI-R-CX0s-ccw-c-11-0-UI 3'.
Length = 481
Score = 22.1 bits (42), Expect(3) = 1.5
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3 / -2
Query: 165 PPPWGPYFW 191
PPP GP+F+
Sbjct: 96 PPPGGPFFF 70
Score = 20.8 bits (39), Expect(3) = 1.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / -2
Query: 40 PFQIFFFF 63
PF +FFFF
Sbjct: 399 PFSLFFFF 376
Score = 17.6 bits (32), Expect(3) = 1.5
Identities = 6/11 (54%), Positives = 6/11 (54%)
Frame = +3 / -1
Query: 3 PPKNFGFKKAP 35
PP FGF P
Sbjct: 463 PPPFFGFTPPP 431
>gb|AI679663.1|AI679663 tu65b01.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGE:2255881 3'
similar to TR:O77202 O77202 MYOSIN-IA. ;contains element
MSR1 repetitive element ;.
Length = 103
Score = 28.1 bits (55), Expect(2) = 1.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3 / +2
Query: 123 GNKTSPGGPLKTQFPP 170
GN PG P K Q PP
Sbjct: 8 GNPARPGAPQKPQGPP 55
Score = 17.1 bits (31), Expect(2) = 1.5
Identities = 4/4 (100%), Positives = 4/4 (100%)
Frame = +3 / +1
Query: 168 PPWG 179
PPWG
Sbjct: 58 PPWG 69
>gb|AW167926.1|AW167926 xg57b11.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2632413 3'
similar to contains element TAR1 repetitive element ;.
Length = 439
Score = 27.2 bits (53), Expect(2) = 1.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2 / +3
Query: 137 PRGALKNPISPPLGPLF 187
PRGA K P PP PLF
Sbjct: 117 PRGAQKKPRPPPGPPLF 167
Score = 26.7 bits (52), Expect(2) = 2.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2 / -1
Query: 186 NKGPKGGEIGFLRAPRG 136
NKG GG GF APRG
Sbjct: 166 NKGGPGGGRGFFWAPRG 116
Score = 20.8 bits (39), Expect(2) = 1.5
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = +1 / +2
Query: 46 QIFFFFLG 69
+IFFFFLG
Sbjct: 74 KIFFFFLG 97
Score = 20.3 bits (38), Expect(2) = 2.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -3
Query: 67 PKKKKKF 47
PKKKKKF
Sbjct: 95 PKKKKKF 75
>gb|AW088805.1|AW088805 xd30e09.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:2595304 3'
similar to contains element MSR1 MSR1 repetitive element
;.
Length = 333
Score = 24.4 bits (47), Expect(2) = 1.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3 / -1
Query: 165 PPPWGPYF 188
PPPWG +F
Sbjct: 174 PPPWGGFF 151
Score = 23.1 bits (44), Expect(2) = 1.5
Identities = 9/21 (42%), Positives = 11/21 (51%)
Frame = +1 / -1
Query: 1 NPQKILVLKRPLNPFQIFFFF 63
+P + KRPL FFFF
Sbjct: 300 SPGPVFFFKRPLKRKFFFFFF 238
>gb|AI845379.1|AI845379 UI-M-BG0-ahx-g-09-0-UI.s1 NIH_BMAP_MSC Mus musculus cDNA clone
UI-M-BG0-ahx-g-09-0-UI 3'.
Length = 214
Score = 23.1 bits (44), Expect(3) = 1.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3 / +2
Query: 159 QFPPPWGP 182
+FP PWGP
Sbjct: 191 RFPTPWGP 214
Score = 18.5 bits (34), Expect(3) = 1.5
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +1 / +1
Query: 52 FFFFL 66
FFFFL
Sbjct: 4 FFFFL 18
Score = 16.2 bits (29), Expect(3) = 1.5
Identities = 4/9 (44%), Positives = 5/9 (55%)
Frame = +3 / +2
Query: 120 FGNKTSPGG 146
+GN GG
Sbjct: 38 WGNPKKKGG 64
>