(Linear) MAP of: ./Fgr-S_1_A04_T7.seq check: 8489 from: 1 to: 379 Fgr-S_1_A04_T7 0 0 0 1 379 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. Bce83I EagI | HindIII XhoI XbaI | | | | | GCGTGGTCGCGGCCGAGGTACAAATCTACTCAAGTTACAAGCTTGGACTCCATCATAGGTGTTACTCGAGACTTGATCTCTATTCTAGAACTCTCTAGGC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGTTTAGATGAGTTCAATGTTCGAACCTGAGGTAGTATCCACAATGAGCTCTGAACTAGAGATAAGATCTTGAGAGATCCG a A W S R P R Y K S T Q V T S L D S I I G V T R D L I S I L E L S R R - b R G R G R G T N L L K L Q A W T P S * V L L E T * S L F * N S L G - c V V A A E V Q I Y S S Y K L G L H H R C Y S R L D L Y S R T L * A - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d T T A A S T C I * E L * L S P S W * L H * E L S S R * E L V R * A - e R P R P R P V F R S L N C A Q V G D Y T N S S V Q D R N * F E R P - f H D R G L Y L D V * T V L K S E M M P T V R S K I E I R S S E L - DraIII ApaI SexAI | | | GATTTCACCGGGTGAGTAAGCAACATCAGTCGGGCCCAAAGAACAACCTAAACGGTGCGTGAATGTTCCTTTTGCTCCTTGCACAAAGATGACCAGGTTC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CTAAAGTGGCCCACTCATTCGTTGTAGTCAGCCCGGGTTTCTTGTTGGATTTGCCACGCACTTACAAGGAAAACGAGGAACGTGTTTCTACTGGTCCAAG a F H R V S K Q H Q S G P K N N L N G A * M F L L L L A Q R * P G S - b D F T G * V S N I S R A Q R T T * T V R E C S F C S L H K D D Q V H - c I S P G E * A T S V G P K E Q P K R C V N V P F A P C T K M T R F - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d I E G P S Y A V D T P G L S C G L R H T F T G K A G Q V F I V L N - e S K V P H T L L M L R A W L V V * V T R S H E K Q E K C L S S W T - f R N * R T L L C C * D P G F F L R F P A H I N R K S R A C L H G P E - BpmI BstEII HgiEII BsmI | | | | ACATTACATCAAGCAATCCAAAACCCACCTCCAGTGAGGTAACCATCACCATCCTCGGTGCCCTTCTTCTCTTGTGCATTCATGGATGATGAACTGCCTG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TGTAATGTAGTTCGTTAGGTTTTGGGTGGAGGTCACTCCATTGGTAGTGGTAGGAGCCACGGGAAGAAGAGAACACGTAAGTACCTACTACTTGACGGAC a H Y I K Q S K T H L Q * G N H H H P R C P S S L V H S W M M N C L - b I T S S N P K P T S S E V T I T I L G A L L L L C I H G * * T A C - c T L H Q A I Q N P P P V R * P S P S S V P F F S C A F M D D E L P A - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d V N C * A I W F G G G T L Y G D G D E T G K K E Q A N M S S S S G - e * M V D L L G F G V E L S T V M V M R P A R R R K H M * P H H V A Q - f C * M L C D L V W R W H P L W * W G R H G E E R T C E H I I F Q R - EciI BspMI | SmaI | | NcoI BsgI SrfI | | | | | | | CAAAACCATGGGACGTGCAGACGTTAGAACGAACTCGTAAAAACCTGAACATTGATTACCTGCCCGGGCGGACGCTCGA 301 ---------+---------+---------+---------+---------+---------+---------+--------- 379 GTTTTGGTACCCTGCACGTCTGCAATCTTGCTTGAGCATTTTTGGACTTGTAACTAATGGACGGGCCCGCCTGCGAGCT a Q N H G T C R R * N E L V K T * T L I T C P G G R S - b K T M G R A D V R T N S * K P E H * L P A R A D A R - c K P W D V Q T L E R T R K N L N I D Y L P G R T L - 301 ---------+---------+---------+---------+---------+---------+---------+--------- 379 d A F G H S T C V N S R V R L F R F M S * R G P R V S S - e L V M P R A S T L V F E Y F G S C Q N G A R A S A R - f C F W P V H L R * F S S T F V Q V N I V Q G P P R E - Enzymes that do cut: ApaI Bce83I BpmI BsgI BsmI BspMI BstEII DraIII EagI EciI HgiEII HindIII NcoI SexAI SmaI SrfI XbaI XhoI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BamHI BbsI BcgI BclI BfiI BglI BglII BplI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsiWI BsmBI BspEI BspGI BspLU11I BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstXI Bsu36I ClaI DraI DrdI DrdII EarI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HpaI KpnI MfeI MluI MscI NarI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XcmI XmnI