(Linear) MAP of: ./Fgr-S_1_A05_T7.seq check: 1959 from: 1 to: 522 Fgr-S_1_A05_T7 0 0 0 1 522 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. BsrBI EagI BplI | BbsI BsgI BamHI | | | | | | GCGTGGTCGCGGCCGAGGTCCGCTCCGGTGAGAATCCGTCGCCATGTCTTCCAGCGAGGTCGCCTGCACCCTTGCCGCCCTCATCCTCCACGATGACGGG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCAGGCGAGGCCACTCTTAGGCAGCGGTACAGAAGGTCGCTCCAGCGGACGTGGGAACGGCGGGAGTAGGAGGTGCTACTGCCC a A W S R P R S A P V R I R R H V F Q R G R L H P C R P H P P R * R D - b R G R G R G P L R * E S V A M S S S E V A C T L A A L I L H D D G - c V V A A E V R S G E N P S P C L P A R S P A P L P P S S S T M T G - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P G S R H S D T A M D E L S T A Q V R A A R M R W S S P - e H D R G L D A G T L I R R W T K W R P R R C G Q R G * G G R H R - f T T A A S T R E P S F G D G H R G A L D G A G K G G E D E V I V P - EarI EarI BsaBI NruI StuI SapI BstXI| | | | | || ATCCCCATCACTTCCGAGAAGATCGCGACGGTGGTGAAGGCTGCCGGAATCAAGGTTGAGGCCTACTGGCCCGCGCTCTTCGCCAAGCTCCTGGAGAAGA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TAGGGGTAGTGAAGGCTCTTCTAGCGCTGCCACCACTTCCGACGGCCTTAGTTCCAACTCCGGATGACCGGGCGCGAGAAGCGGTTCGAGGACCTCTTCT a P H H F R E D R D G G E G C R N Q G * G L L A R A L R Q A P G E E - b I P I T S E K I A T V V K A A G I K V E A Y W P A L F A K L L E K R - c S P S L P R R S R R W * R L P E S R L R P T G P R S S P S S W R R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d I G M V E S F I A V T T F A A P I L T S A * Q G A S K A L S R S F - e S G W * K R S S R S P P S P Q R F * P Q P R S A R A R R W A G P S S - f D G D S G L L D R R H H L S G S D L N L G V P G R E E G L E Q L L - BseRI AlwNI BpmI | BpmI PvuII | EarI | | | | | | GGAGCGTCGATGACCTCATCCTTTCCGTCGGATCTGGTGGAGGTGGTGCTCCAGCTGCTGCTGCTGCTGCCCCGGCTGCTGGTGGTGCTGCTGCCGCTGA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CCTCGCAGCTACTGGAGTAGGAAAGGCAGCCTAGACCACCTCCACCACGAGGTCGACGACGACGACGACGGGGCCGACGACCACCACGACGACGGCGACT a E R R * P H P F R R I W W R W C S S C C C C C P G C W W C C C R * - b S V D D L I L S V G S G G G G A P A A A A A A P A A G G A A A A E - c G A S M T S S F P S D L V E V V L Q L L L L L P R L L V V L L P L K - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d L L T S S R M R E T P D P P P P A G A A A A A A G A A P P A A A A S - e S R R H G * G K R R I Q H L H H E L Q Q Q Q Q G P Q Q H H Q Q R Q - f P A D I V E D K G D S R T S T T S W S S S S S G R S S T T S S G S - EarI Eco57I EarI Eco57I XcmI | | | | AGAGAAGAAGGAAGAAAAGAAAGAAGAGGCCAAGGAAGAGAGCGATGATGACATGGGCTTCAGCTTGTTCGACTAAGCTGTTCAATTCCAGTTCTCCTGT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TCTCTTCTTCCTTCTTTTCTTTCTTCTCCGGTTCCTTCTCTCGCTACTACTGTACCCGAAGTCGAACAAGCTGATTCGACAAGTTAAGGTCAAGAGGACA a R E E G R K E R R G Q G R E R * * H G L Q L V R L S C S I P V L L W - b E K K E E K K E E A K E E S D D D M G F S L F D * A V Q F Q F S C - c R R R K K R K K R P R K R A M M T W A S A C S T K L F N S S S P V - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S F F S S F F S S A L S S L S S S M P K L K N S * A T * N W N E Q - e L S S P L F S L L P W P L S R H H C P S * S T R S L Q E I G T R R - f F L L L F F L F F L G L F L A I I V H A E A Q E V L S N L E L E G T - BsrDI | GGGTTCTTCTATGCGAAAGACTTGTCTTATGTGCTTTTAGGTCGAATTTTGAAGATTTATTATGTTATGCTGTTTGAGACTAAGTATCTGTGCAATGAGT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CCCAAGAAGATACGCTTTCTGAACAGAATACACGAAAATCCAGCTTAAAACTTCTAAATAATACAATACGACAAACTCTGATTCATAGACACGTTACTCA a V L L C E R L V L C A F R S N F E D L L C Y A V * D * V S V Q * V - b G F F Y A K D L S Y V L L G R I L K I Y Y V M L F E T K Y L C N E Y - c G S S M R K T C L M C F * V E F * R F I M L C C L R L S I C A M S - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d P N K * A F S K D * T S K P R I K F I * * T I S N S V L Y R H L S - e H T R R H S L S T K H A K L D F K S S K N H * A T Q S * T D T C H T - f P E E I R F V Q R I H K * T S N Q L N I I N H Q K L S L I Q A I L - EagI NotI BglI| BspMI|| SmaI ||| SrfI |||BsrBI | ||| | ACCTGCCCGGGCGGCCGCTCGA 501 ---------+---------+-- 522 TGGACGGGCCCGCCGGCGAGCT a P A R A A A R - b L P G R P L - c T C P G G R S - 501 ---------+---------+-- 522 d Y R G P R G S S - e G A R A A A R - f V Q G P P R E - Enzymes that do cut: AlwNI BamHI BbsI BglI BplI BpmI BsaBI BseRI BsgI BspMI BsrBI BsrDI BstXI EagI EarI Eco57I NotI NruI PvuII SapI SmaI SrfI StuI XcmI Enzymes that do not cut: AatII AceIII AflII AhdI ApaI ApaBI ApaLI AscI AvrII Bce83I BcgI BclI BfiI BglII Bpu10I Bpu1102I BsaI BsaXI BsbI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrGI BssHII BssSI Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdI DrdII EciI Eco47III EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI RcaI RsrII SacI SacII SalI SanDI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI SwaI Tth111I VspI XbaI XhoI XmnI