(Linear) MAP of: ./Fgr-S_1_A07_T7.seq check: 7035 from: 1 to: 324 Fgr-S_1_A07_T7 0 0 0 1 324 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. Pfl1108I Eco57I EagI StuI | BclI | Sse8647I | | | | | | GCGTGGTCGCGGCCGAGGTAGTGGGTCAAAACAACTGAAGGCCTACGAGATGTGATCAACCGGCACTACCCTGAAATTACTGCCAACTGGATGAGGTCCT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATCACCCAGTTTTGTTGACTTCCGGATGCTCTACACTAGTTGGCCGTGATGGGACTTTAATGACGGTTGACCTACTCCAGGA a A W S R P R * W V K T T E G L R D V I N R H Y P E I T A N W M R S S - b R G R G R G S G S K Q L K A Y E M * S T G T T L K L L P T G * G P - c V V A A E V V G Q N N * R P T R C D Q P A L P * N Y C Q L D E V L - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P L P D F C S F A * S I H D V P V V R F N S G V P H P G - e H D R G L Y H T L V V S P R R S T I L R C * G S I V A L Q I L D - f T T A A S T T P * F L Q L G V L H S * G A S G Q F * Q W S S S T R - SpeI NdeI SphI | | | CTAGTGCTTTCTCTGTGTGGGATGCAGACTACTAGTGCAAAAATAAAAGGCCCCCTGCCATATGTAGTGCATGCAATTTGGCAAGTTCTATGAAGTATCA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GATCACGAAAGAGACACACCCTACGTCTGATGATCACGTTTTTATTTTCCGGGGGACGGTATACATCACGTACGTTAAACCGTTCAAGATACTTCATAGT a S A F S V W D A D Y * C K N K R P P A I C S A C N L A S S M K Y H - b L V L S L C G M Q T T S A K I K G P L P Y V V H A I W Q V L * S I I - c * C F L C V G C R L L V Q K * K A P C H M * C M Q F G K F Y E V S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d R T S E R H P I C V V L A F I F P G R G Y T T C A I Q C T R H L I - e E L A K E T H S A S * * H L F L L G G A M H L A H L K A L E I F Y * - f * H K R Q T P H L S S T C F Y F A G Q W I Y H M C N P L N * S T D - NdeI | TTTGTTCACAAAATTATTGTGTTTGTTCAGTGTAAATAAATATACTTAAATATGTCAGTGTAACATATGTAATAGGATTCATTATTGCATGACACAAGTT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AAACAAGTGTTTTAATAACACAAACAAGTCACATTTATTTATATGAATTTATACAGTCACATTGTATACATTATCCTAAGTAATAACGTACTGTGTTCAA a L F T K L L C L F S V N K Y T * I C Q C N I C N R I H Y C M T Q V - b C S Q N Y C V C S V * I N I L K Y V S V T Y V I G F I I A * H K L - c F V H K I I V F V Q C K * I Y L N M S V * H M * * D S L L H D T S C - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d M Q E C F * Q T Q E T Y I F I S L Y T L T V Y T I P N M I A H C L N - e K N V F N N H K N L T F L Y V * I H * H L M H L L I * * Q M V C T - f N T * L I I T N T * H L Y I Y K F I D T Y C I Y Y S E N N C S V L - EagI NotI BglI| BspMI|| SmaI ||| SrfI |||BsrBI | ||| | GTACCTGCCCGGGCGGCCGCTCGA 301 ---------+---------+---- 324 CATGGACGGGCCCGCCGGCGAGCT a V P A R A A A R - b Y L P G R P L - c T C P G G R S - 301 ---------+---------+---- 324 d Y R G P R G S S - e T G A R A A A R - f Q V Q G P P R E - Enzymes that do cut: BclI BglI BspMI BsrBI EagI Eco57I NdeI NotI Pfl1108I SmaI SpeI SphI SrfI Sse8647I StuI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NgoAIV NheI NruI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI Sse8387I SspI SwaI Tth111I VspI XbaI XcmI XhoI XmnI