(Linear) MAP of: ./Fgr-S_1_A09_T7.seq check: 8763 from: 1 to: 208 Fgr-S_1_A09_T7 0 0 0 1 208 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. PacI PacI | VspI | | | GAGGTACAACAACAGCAAAAGGGAAGCGTTTTTTACACAGGAATTACCCATCCTAATCCCGCCCTAATTTAATTAATTAACTAAATTTCAAGAACAGCTC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTCCATGTTGTTGTCGTTTTCCCTTCGCAAAAAATGTGTCCTTAATGGGTAGGATTAGGGCGGGATTAAATTAATTAATTGATTTAAAGTTCTTGTCGAG a E V Q Q Q Q K G S V F Y T G I T H P N P A L I * L I N * I S R T A Q - b R Y N N S K R E A F F T Q E L P I L I P P * F N * L T K F Q E Q L - c G T T T A K G K R F L H R N Y P S * S R P N L I N * L N F K N S S - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P V V V A F P F R K K C L F * G D * D R G L K I L * S F K L F L E - e L Y L L L L L S A N K V C S N G M R I G G * N L * N V L N * S C S - f T C C C C F P L T K * V P I V W G L G A R I * N I L * I E L V A - EagI NotI BglI| BspMI|| BssSI SmaI ||| AceIII | BspEI SacI ApaBI SrfI ||| | | | | | | ||| AACGCCACGCCACGAGCTTATCCGGAACAGAGCTCATCGGGGCAGAGGCACGGACACGCCCTTGCGTCGGCGTCCGCAGCCGTTGCACCTGCCCGGGCGG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TTGCGGTGCGGTGCTCGAATAGGCCTTGTCTCGAGTAGCCCCGTCTCCGTGCCTGTGCGGGAACGCAGCCGCAGGCGTCGGCAACGTGGACGGGCCCGCC a R H A T S L S G T E L I G A E A R T R P C V G V R S R C T C P G G - b N A T P R A Y P E Q S S S G Q R H G H A L A S A S A A V A P A R A A - c T P R H E L I R N R A H R G R G T D T P L R R R P Q P L H L P G R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d V G R W S S I R F L A * R P L P V S V G K R R R G C G N C R G P R - e L A V G R A * G S C L E D P C L C P C A R A D A D A A T A G A R A - f * R W A V L K D P V S S M P A S A R V R G Q T P T R L R Q V Q G P P - BsrBI | CCGCTCGA 201 -------- 208 GGCGAGCT a R S - b A R - c P L - 201 -------- 208 d G S S - e A A R - f R E - Enzymes that do cut: AceIII ApaBI BglI BspEI BspMI BsrBI BssSI EagI NotI PacI SacI SmaI SrfI VspI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspGI BspLU11I BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I Sse8647I SspI StuI SwaI Tth111I XbaI XcmI XhoI XmnI