(Linear) MAP of: ./Fgr-S_1_A10_T7.seq check: 3417 from: 1 to: 441 Fgr-S_1_A10_T7 0 0 0 1 441 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. EagI NsiI ApaBI | | | GCGTGGTCGCGGCCGAGGTCCGCACTGGATATGGCAAGGGATATGCATTGGTTGAATATGGATGTTTTGAGGAAGCACAAACTGCAATCAGAAGTATGAA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCAGGCGTGACCTATACCGTTCCCTATACGTAACCAACTTATACCTACAAAACTCCTTCGTGTTTGACGTTAGTCTTCATACTT a A W S R P R S A L D M A R D M H W L N M D V L R K H K L Q S E V * M - b R G R G R G P H W I W Q G I C I G * I W M F * G S T N C N Q K Y E - c V V A A E V R T G Y G K G Y A L V E Y G C F E E A Q T A I R S M N - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d R P R P R P G C Q I H C P I H M P Q I H I N Q P L V F Q L * F Y S - e H D R G L D A S S I A L S I C Q N F I S T K L F C L S C D S T H - f T T A A S T R V P Y P L P Y A N T S Y P H K S S A C V A I L L I F - ApaLI PvuII HpaI BsmI Sse8647I BssSI | | | | | | | TGGGACACAGCTGTTAACAAAGACCATCCATGTTGATTGGGCATTCAACAGAGGTCCTATACAGAACGTCACGAGTGCACGGCCAGCACAGCGACGGTCT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ACCCTGTGTCGACAATTGTTTCTGGTAGGTACAACTAACCCGTAAGTTGTCTCCAGGATATGTCTTGCAGTGCTCACGTGCCGGTCGTGTCGCTGCCAGA a G H S C * Q R P S M L I G H S T E V L Y R T S R V H G Q H S D G L - b W D T A V N K D H P C * L G I Q Q R S Y T E R H E C T A S T A T V * - c G T Q L L T K T I H V D W A F N R G P I Q N V T S A R P A Q R R S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d H S V A T L L S W G H Q N P M * C L D * V S R * S H V A L V A V T - e I P C L Q * C L G D M N I P C E V S T R Y L V D R T C P W C L S P R - f P V C S N V F V M W T S Q A N L L P G I C F T V L A R G A C R R D - AceIII StuI BsrDI | | | AGGACTCCACCTCGCAGGCTTGCTGCCATGACATACTGAGAGGGAGCTGCTAGGCCTGCAATGTTGGGCCAGCCTTGGTCAGTGTTTTTTTGTAGTCGCC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TCCTGAGGTGGAGCGTCCGAACGACGGTACTGTATGACTCTCCCTCGACGATCCGGACGTTACAACCCGGTCGGAACCAGTCACAAAAAAACATCAGCGG a G L H L A G L L P * H T E R E L L G L Q C W A S L G Q C F F V V A - b D S T S Q A C C H D I L R G S C * A C N V G P A L V S V F L * S P - c R T P P R R L A A M T Y * E G A A R P A M L G Q P W S V F F C S R Q - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d * S E V E C A Q Q W S M S L P L Q * A Q L T P G A K T L T K K Y D G - e P S W R A P K S G H C V S L S S S P R C H Q A L R P * H K K T T A - f L V G G R L S A A M V Y Q S P A A L G A I N P W G Q D T N K Q L R - BstEII | AGGGATTTGCTATGTCATAGATTTTAGTCTTAACCGTCGTCATCTGGCACTAAGCGGTAACCGAACAATGAACCGGGTATGTATCGTCGAGAAACCGAGT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TCCCTAAACGATACAGTATCTAAAATCAGAATTGGCAGCAGTAGACCGTGATTCGCCATTGGCTTGTTACTTGGCCCATACATAGCAGCTCTTTGGCTCA a R D L L C H R F * S * P S S S G T K R * P N N E P G M Y R R E T E S - b G I C Y V I D F S L N R R H L A L S G N R T M N R V C I V E K P S - c G F A M S * I L V L T V V I W H * A V T E Q * T G Y V S S R N R V - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d P I Q * T M S K L R L R R * R A S L P L R V I F R T H I T S F G L - e L S K S H * L N * D * G D D D P V L R Y G F L S G P I Y R R S V S - f W P N A I D Y I K T K V T T M Q C * A T V S C H V P Y T D D L F R T - EagI NotI BglI| BspMI|| SmaI ||| NheI SrfI |||BsrBI | | ||| | CCTGATTCTGCTAGCCTGTACCTGCCCGGGCGGCCGCTCGA 401 ---------+---------+---------+---------+- 441 GGACTAAGACGATCGGACATGGACGGGCCCGCCGGCGAGCT a * F C * P V P A R A A A R - b P D S A S L Y L P G R P L - c L I L L A C T C P G G R S - 401 ---------+---------+---------+---------+- 441 d G S E A L R Y R G P R G S S - e D Q N Q * G T G A R A A A R - f R I R S A Q V Q G P P R E - Enzymes that do cut: AceIII ApaBI ApaLI BglI BsmI BspMI BsrBI BsrDI BssSI BstEII EagI HpaI NheI NotI NsiI PvuII SmaI SrfI Sse8647I StuI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI AscI AvrII BamHI BbsI Bce83I BcgI BclI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmBI BspEI BspGI BspLU11I BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NruI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI Sse8387I SspI SwaI Tth111I VspI XbaI XcmI XhoI XmnI