(Linear) MAP of: ./Fgr-S_1_A11_T7.seq check: 8400 from: 1 to: 464 Fgr-S_1_A11_T7 0 0 0 1 464 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * July 30, 2001 22:32 .. FseI NgoAIV EagI | NgoAIV | | NsiI | | | SphI | | | | NsiI | | | | | BsaBI EagI SphI | | | | | | DrdII DraI EcoRV | | | | | | | | | | | | | GCGTGGTCGCGGCCGAGGTACAAGGCATGCATGCATGGGCCGGCCGGCAAAACATATATAGGAACCAAGAAAGAAACCTCGAATTTAAACTAACAGATAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CGCACCAGCGCCGGCTCCATGTTCCGTACGTACGTACCCGGCCGGCCGTTTTGTATATATCCTTGGTTCTTTCTTTGGAGCTTAAATTTGATTGTCTATA a A W S R P R Y K A C M H G P A G K T Y I G T K K E T S N L N * Q I S - b R G R G R G T R H A C M G R P A K H I * E P R K K P R I * T N R Y - c V V A A E V Q G M H A W A G R Q N I Y R N Q E R N L E F K L T D I - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d H D R G L Y L A H M C P G A P L V Y I P V L F S V E F K F * C I - e T T A A S T C P M C A H A P R C F M Y L F W S L F R S N L S V S I - f R P R P R P V L C A H M P R G A F C I Y S G L F F G R I * V L L Y - HgiEII EciI Eco57I | | | CAATCCGGTATATATATAGCTTTTCCCGACCATGCTGGGTGCTTCTCCTATTCCGGCGGAGCGATATGTCTGAAGTTGCCGTTGATTTCTTCACGGAAGC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTTAGGCCATATATATATCGAAAAGGGCTGGTACGACCCACGAAGAGGATAAGGCCGCCTCGCTATACAGACTTCAACGGCAACTAAAGAAGTGCCTTCG a I R Y I Y S F S R P C W V L L L F R R S D M S E V A V D F F T E A - b Q S G I Y I A F P D H A G C F S Y S G G A I C L K L P L I S S R K R - c N P V Y I * L F P T M L G A S P I P A E R Y V * S C R * F L H G S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d D I R Y I Y L K E R G H Q T S R R N R R L S I D S T A T S K K V S A - e L G T Y I Y S K G V M S P A E G I G A S R Y T Q L Q R Q N R * P L - f * D P I Y I A K G S W A P H K E * E P P A I H R F N G N I E E R F - BclI PinAI | | GGACGGACTTGGGGCCGGGGCAAACTCAACTAAAAGATGATCAGTACCGGTGTACTATCTTGGACCGAAAATTAGCGTTGCTAGGTTTTTCTTGTCGATC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CCTGCCTGAACCCCGGCCCCGTTTGAGTTGATTTTCTACTAGTCATGGCCACATGATAGAACCTGGCTTTTAATCGCAACGATCCAAAAAGAACAGCTAG a D G L G A G A N S T K R * S V P V Y Y L G P K I S V A R F F L S I - b T D L G P G Q T Q L K D D Q Y R C T I L D R K L A L L G F S C R S - c G R T W G R G K L N * K M I S T G V L S W T E N * R C * V F L V D L - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S P S P A P A F E V L L H D T G T Y * R P G F I L T A L N K K D I - e P R V Q P R P L S L * F I I L V P T S D Q V S F * R Q * T K R T S - f R V S K P G P C V * S F S S * Y R H V I K S R F N A N S P K E Q R D - BsaI BssSI AceIII RcaI BpmI | Bpu1102I | DrdII | | | | | | | | TGATGACTCAATGGCTAGTCATGATCCGCGCCATGCCAGTCCGGTCTCCCCAGCGTGAACTCCAGGCTCGGGCTGCTCAGCTCGTGGTTCGACACTTGCG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 ACTACTGAGTTACCGATCAGTACTAGGCGCGGTACGGTCAGGCCAGAGGGGTCGCACTTGAGGTCCGAGCCCGACGAGTCGAGCACCAAGCTGTGAACGC a * * L N G * S * S A P C Q S G L P S V N S R L G L L S S W F D T C E - b D D S M A S H D P R H A S P V S P A * T P G S G C S A R G S T L A - c M T Q W L V M I R A M P V R S P Q R E L Q A R A A Q L V V R H L R - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d Q H S L P * D H D A G H W D P R G L T F E L S P S S L E H N S V Q - e R I V * H S T M I R A M G T R D G W R S S W A R A A * S T T R C K R - f S S E I A L * S G R W A L G T E G A H V G P E P Q E A R P E V S A - EagI NotI BglI| BspMI|| SmaI ||| SrfI ||| PstI BbsI | |||BsrBI | | | ||| | AGCCGGTTGATCTGCAGGGCTCCATGTTCTCCATTGGAGAAGACCTGCCCGGGCGGCCGCTCGA 401 ---------+---------+---------+---------+---------+---------+---- 464 TCGGCCAACTAGACGTCCCGAGGTACAAGAGGTAACCTCTTCTGGACGGGCCCGCCGGCGAGCT a P V D L Q G S M F S I G E D L P G R P L - b S R L I C R A P C S P L E K T C P G G R S - c A G * S A G L H V L H W R R P A R A A A R - 401 ---------+---------+---------+---------+---------+---------+---- 464 d S G T S R C P E M N E M P S S R G P R G S S - e A P Q D A P S W T R W Q L L G A R A A A R - f L R N I Q L A G H E G N S F V Q G P P R E - Enzymes that do cut: AceIII BbsI BclI BglI BpmI Bpu1102I BsaI BsaBI BspMI BsrBI BssSI DraI DrdII EagI EciI Eco57I EcoRV FseI HgiEII NgoAIV NotI NsiI PinAI PstI RcaI SmaI SphI SrfI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI Bce83I BcgI BfiI BglII BplI Bpu10I BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraIII DrdI EarI Eco47III EcoNI EcoRI FspI HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NheI NruI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PvuI PvuII RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI